Citrus Sinensis ID: 028207

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210--
Protein Sequence
MVEHLLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFSGNGIKLRRGYSQTISANPSKVLVLLLLVIE
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEcccEEEEEcccEEEEEEEcccccccEEEEEEEEEccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHccccccccccccccccEEEcccccccEEEEEEcccccEEEEccccccccccccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHcccccccEEEEcccEEEEEEEEcEEcEEEEcccccEEEEEEEEEccccccEEcccHHHHHHHHHHHHHHHHHcccccccccccEEEccccccEcccccccEEEccccccccEEEEEEccccccHHccccccccEEEccccccccccccccEEEEEEEEc
Coil and Loop (DISEMBL)
MVEHLLQREEELLSNWWKEYAecsegprerassikksdVQASLTESVrsaelyeveeervgvpvkgglyevdlvrrhcfpvywngdnrrvlRGHWFarkggldwlpiREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLGLhalftgeddtwEAWLNVDASGFSSIISFsgngiklrrgysqtisanPSKVLVLLLLVIE
Flexible Loop (DISEMBL)
MVEHLLQREEELLSNWWKEYAECSEgprerassikksdvqasltesvrsaelyeveeervgvpvkgglyevDLVRRHCFpvywngdnrrvLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFSGNGIKLRRGysqtisanpskvLVLLLLVIE
Low Complexity Region (SEG)
MVEHLLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDAsgfssiisfsgNGIKLRRGYSQTISANPSKVLVLLLLVIE
Disordered region (IsUnstruct)
***********LLSNWWKEYA******************************LYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFSGNGIKLRRGYSQTISANPSKVLVLLLLVI*
Disordered Region (DISOPRED)
****LLQREEELLSNWWK********************************************PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRT******************YIYFLGLHALFTGEDDTWEA*******************IK**************KVLVLLLLVIE
Disordered Region (DISEMBL)
MVEHLLQREEELLSNWWKEYA***********************ESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFSGNGIKLRRGYSQTISANPSKVLVLLLLVIE
Disordered Region (DISPRO)
*VEHLLQREEELLSNWWKEYAECSE************************AELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFSGNGIKLRRGYSQTISANPSKVLVLLLLVIE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEHLLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFSGNGIKLRRGYSQTISANPSKVLVLLLLVIE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	212	2.2.26 [Sep-21-2011]
O46606	875	Phospholipase DDHD1 OS=Bo	yes	no	0.660	0.16	0.284	4e-07
Q8NEL9	900	Phospholipase DDHD1 OS=Ho	yes	no	0.853	0.201	0.269	1e-06
P87109	757	Probable phospholipase C2	yes	no	0.504	0.141	0.315	2e-06
Q6NZC7	998	SEC23-interacting protein	no	no	0.400	0.085	0.347	8e-05
Q9Y6Y8	1000	SEC23-interacting protein	no	no	0.400	0.085	0.336	0.0004

>sp|O46606|DDHD1_BOVIN Phospholipase DDHD1 OS=Bos taurus GN=DDHD1 PE=1 SV=1

 Score = 55.1 bits (131), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 25/165 (15%)

Query: 62  VPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYR 120
           V V+GGLYEVD+ +  C+PVYWN  D   V+RG WF       W P+ E+ +  +E  + 
Sbjct: 260 VCVRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFIDG---TWQPLEEEESNLIEQEHL 316

Query: 121 SQVWHRRTFNLLDF-LQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDAS------ 173
           S+   ++     D  +   +  K  +        H  +   D   E +L  DA+      
Sbjct: 317 SRFRGQQMQESFDIEVSKPIDGKDAIHSFKLSRNHVDWHSVD---EVYLYSDATTSKIAR 373

Query: 174 ------GFSSIISFSGNGIKLRRGYSQ--TISANPSKVLVLLLLV 210
                 GFS     S +G +L RGY +  T+   PS+   ++ +V
Sbjct: 374 TVTQKLGFSKA---SSSGTRLHRGYVEEATLEDKPSQTTHIVFVV 415

Phospholipase that hydrolyzes phosphatidic acid.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q8NEL9|DDHD1_HUMAN Phospholipase DDHD1 OS=Homo sapiens GN=DDHD1 PE=1 SV=2

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 23/204 (11%)

Query: 23  CSE-GPRERASSIKKSDVQASLTESVRSAELYEVEEERV-GVPVKGGLYEVDLVRRHCFP 80
           CS  GP   +      D      +S    E   VE   +  V V+GGLYEVD+ +  C+P
Sbjct: 216 CSPTGPASSSGEDDDEDRACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYP 275

Query: 81  VYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLEI----AYRSQVWHRRTFNL---- 131
           VYWN  D   V+RG WF       W P+ E+ +  +E      +R Q   +  F++    
Sbjct: 276 VYWNQADKIPVMRGQWFIDG---TWQPLEEEESNLIEQEHLNCFRGQQM-QENFDIEVSK 331

Query: 132 -LDFLQLELTCKALLQYIYFLGLHALFTGEDDTWE--AWLNVDASGFSSIISFSGNGIKL 188
            +D      + K    ++ +  +  ++   D T    A       GFS     S +G +L
Sbjct: 332 SIDGKDAVHSFKLSRNHVDWHSVDEVYLYSDATTSKIARTVTQKLGFSKA---SSSGTRL 388

Query: 189 RRGYSQ--TISANPSKVLVLLLLV 210
            RGY +  T+   PS+   ++ +V
Sbjct: 389 HRGYVEEATLEDKPSQTTHIVFVV 412

Probable phospholipase that hydrolyzes phosphatidic acid. The different isoforms may change the substrate specificity.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P87109|YDK2_SCHPO Probable phospholipase C20G8.02, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC20G8.02 PE=3 SV=1

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 4/111 (3%)

Query: 26  GPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGG---LYEVDLVRRHCFPVY 82
           GP E   +       A  +E +  + L  VE +    PV      LY V++V R   P+Y
Sbjct: 112 GPTEIKKAKNFLPFSAEDSEHIEKSYLKAVENDGQSEPVNVNEDYLYSVNVVSRELSPIY 171

Query: 83  WNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLD 133
           W+G   R+LRG WF  +G     P  E++A Q+E  Y +   +R   N  D
Sbjct: 172 WDGPVYRILRGTWFFSRGD-KLYPCEENLATQVEEGYLNSCPYREFSNEKD 221

Probable phospholipase that hydrolyzes phosphatidic acid.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q6NZC7|S23IP_MOUSE SEC23-interacting protein OS=Mus musculus GN=Sec23ip PE=1 SV=2

 Score = 47.4 bits (111), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 10/95 (10%)

Query: 42  SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
           S+ +S+   E+Y   + + E V +   GG Y+V L  R    VYW  +   V R  WF  
Sbjct: 285 SVLDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRMRKSVYWEEEPTEVRRCTWF-Y 343

Query: 99  KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
           KG  D  ++P  E+ +E+LE  Y+  V    WHRR
Sbjct: 344 KGDTDSRFIPYTEEFSEKLEAEYKKAVSTNQWHRR 378

Plays a role in the organization of endoplasmic reticulum exit sites.

Mus musculus (taxid: 10090)

>sp|Q9Y6Y8|S23IP_HUMAN SEC23-interacting protein OS=Homo sapiens GN=SEC23IP PE=1 SV=1

 Score = 44.7 bits (104), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 10/95 (10%)

Query: 42  SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
           S+ +S+   E+Y   + + E V +   GG Y+V L  R     YW  +   V R  WF  
Sbjct: 289 SVFDSLNLEEIYNSVQPDPESVVLGTDGGRYDVYLYDRIRKAAYWEEEPAEVRRCTWF-Y 347

Query: 99  KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
           KG  D  ++P  E+ +E+LE  Y+  V    WHRR
Sbjct: 348 KGDTDSRFIPYTEEFSEKLEAEYKKAVTTNQWHRR 382

Plays a role in the organization of endoplasmic reticulum exit sites.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	212
225460119	963	PREDICTED: uncharacterized protein LOC10	0.910	0.200	0.72	6e-81
356529907	914	PREDICTED: phospholipase DDHD1-like [Gly	0.905	0.210	0.722	2e-80
255569112	923	conserved hypothetical protein [Ricinus	0.910	0.209	0.73	7e-80
147864929	331	hypothetical protein VITISV_018588 [Viti	0.915	0.586	0.711	1e-79
449442116	945	PREDICTED: SEC23-interacting protein-lik	0.910	0.204	0.695	8e-76
224135773	929	predicted protein [Populus trichocarpa]	0.910	0.207	0.7	1e-75
224146261	905	predicted protein [Populus trichocarpa]	0.910	0.213	0.695	2e-75
449490252	832	PREDICTED: SEC23-interacting protein-lik	0.905	0.230	0.688	9e-75
22329893	933	protein shoot gravitropism 2 (SGR2) [Ara	0.900	0.204	0.676	4e-73
12322534	869	unknown protein [Arabidopsis thaliana]	0.900	0.219	0.676	6e-73

>gi|225460119|ref|XP_002275612.1| PREDICTED: uncharacterized protein LOC100260107 [Vitis vinifera] gi|297741004|emb|CBI31316.3| unnamed protein product [Vitis vinifera]

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 144/200 (72%), Positives = 163/200 (81%), Gaps = 7/200 (3%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQ--ASLTESVRSAELYEVEEERVGV 62
            LQREEELLS+WW+EYAECSEGP+ER  S   SD++  AS +E+ R A+LYEVEEERVGV
Sbjct: 127 FLQREEELLSSWWREYAECSEGPKERPKSGTNSDLKLKASSSENARPAQLYEVEEERVGV 186

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFP+YWNG+NRRVLRGHWFARKGGLDWLP+REDVAEQLE AYR Q
Sbjct: 187 PVKGGLYEVDLVKRHCFPIYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEFAYRGQ 246

Query: 123 VWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFS 182
           VWHRRTF         +  +         GLHALFTGEDDTWEAWLNVDASGFSS+IS S
Sbjct: 247 VWHRRTFQPSGLFAARIDLQGSTP-----GLHALFTGEDDTWEAWLNVDASGFSSVISLS 301

Query: 183 GNGIKLRRGYSQTISANPSK 202
           GNGIKLRRGYS ++S  P++
Sbjct: 302 GNGIKLRRGYSPSLSPKPTQ 321

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529907|ref|XP_003533528.1| PREDICTED: phospholipase DDHD1-like [Glycine max]

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/198 (72%), Positives = 161/198 (81%), Gaps = 6/198 (3%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPV 64
            LQREEELLS+WW+EYAECSEGPRER SS  K+D + S     +S++LYE+EEERVGVPV
Sbjct: 92  FLQREEELLSSWWREYAECSEGPRERQSSSSKADTE-SFMGHTQSSQLYEIEEERVGVPV 150

Query: 65  KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVW 124
           KGGLYEVDLV+RHCFPVYWNG+NRRVLRGHWFARKGGLDWLP+REDVAEQLEIAYRSQVW
Sbjct: 151 KGGLYEVDLVKRHCFPVYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEIAYRSQVW 210

Query: 125 HRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFSGN 184
           HRRTF         +  +   Q     GLHALF GEDDTWEAWLN DASGFSS +SF+GN
Sbjct: 211 HRRTFQPSGLFAARVDLQGSTQ-----GLHALFMGEDDTWEAWLNFDASGFSSFVSFAGN 265

Query: 185 GIKLRRGYSQTISANPSK 202
           GIKLRRGYS + S  P++
Sbjct: 266 GIKLRRGYSPSNSPKPTQ 283

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569112|ref|XP_002525525.1| conserved hypothetical protein [Ricinus communis] gi|223535204|gb|EEF36883.1| conserved hypothetical protein [Ricinus communis]

 Score =  302 bits (773), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 146/200 (73%), Positives = 161/200 (80%), Gaps = 7/200 (3%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASL--TESVRSAELYEVEEERVGV 62
            L+REEELLS+WWKEYAECSEGP+ R SS KK D + S    +  R+A LYEVEEERVGV
Sbjct: 100 FLEREEELLSSWWKEYAECSEGPKVRLSSDKKLDTEKSACSPKGSRAAHLYEVEEERVGV 159

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFPVYWNG+NRRVLRGHWFARKGGLDWLP+REDVAEQLEIAYRSQ
Sbjct: 160 PVKGGLYEVDLVKRHCFPVYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEIAYRSQ 219

Query: 123 VWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFS 182
           VWHRRTF         +  +         GLHALFTGEDDTWEAWLNVDASGFSSII+ S
Sbjct: 220 VWHRRTFQQSGLFAARVDLQGSTP-----GLHALFTGEDDTWEAWLNVDASGFSSIITLS 274

Query: 183 GNGIKLRRGYSQTISANPSK 202
           GNGIKLRRGYS + S  P++
Sbjct: 275 GNGIKLRRGYSASQSTKPTQ 294

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147864929|emb|CAN79370.1| hypothetical protein VITISV_018588 [Vitis vinifera]

 Score =  301 bits (770), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 143/201 (71%), Positives = 163/201 (81%), Gaps = 7/201 (3%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQ--ASLTESVRSAELYEVEEERVGV 62
            LQREEELLS+WW+EYAECSEGP+ER  S   SD++  AS +E+ R A+LYEVEEERVGV
Sbjct: 127 FLQREEELLSSWWREYAECSEGPKERPKSGTNSDLKLKASSSENARPAQLYEVEEERVGV 186

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFP+YWNG+NRRVLRGHWFARKGGLDWLP+REDVAEQLE AYR Q
Sbjct: 187 PVKGGLYEVDLVKRHCFPIYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEFAYRGQ 246

Query: 123 VWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFS 182
           VWHRRTF         +  +         GLHALFTGEDD WEAWLNVDASGFSS+IS S
Sbjct: 247 VWHRRTFQPSGLFAARIDLQGSTP-----GLHALFTGEDDXWEAWLNVDASGFSSVISLS 301

Query: 183 GNGIKLRRGYSQTISANPSKV 203
           GNGIKLRRGYS ++S  P+++
Sbjct: 302 GNGIKLRRGYSPSLSPKPTQI 322

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442116|ref|XP_004138828.1| PREDICTED: SEC23-interacting protein-like [Cucumis sativus]

 Score =  288 bits (738), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 139/200 (69%), Positives = 157/200 (78%), Gaps = 7/200 (3%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQ--ASLTESVRSAELYEVEEERVGV 62
            LQREEELLS WWKEYAECSEGP+ERA S  + D Q   S ++  +   LY+VEEERVGV
Sbjct: 113 FLQREEELLSIWWKEYAECSEGPKERAGSSLRPDKQRNESTSDVAKLVNLYDVEEERVGV 172

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFPVYWN +NRRV+RGHWFARKGGLDWLP+REDVAEQLEIAYRS+
Sbjct: 173 PVKGGLYEVDLVKRHCFPVYWNAENRRVMRGHWFARKGGLDWLPLREDVAEQLEIAYRSR 232

Query: 123 VWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFS 182
           VW RRTF         +  +      +  GLHALFTGEDDTWEAWLNVDASGFSS+IS  
Sbjct: 233 VWRRRTFQPSGLFASRVDLQG-----FTPGLHALFTGEDDTWEAWLNVDASGFSSVISLG 287

Query: 183 GNGIKLRRGYSQTISANPSK 202
           GNGIKLRRGYS + S  P++
Sbjct: 288 GNGIKLRRGYSPSNSPKPTQ 307

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135773|ref|XP_002327300.1| predicted protein [Populus trichocarpa] gi|222835670|gb|EEE74105.1| predicted protein [Populus trichocarpa]

 Score =  287 bits (735), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 140/200 (70%), Positives = 158/200 (79%), Gaps = 7/200 (3%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDV--QASLTESVRSAELYEVEEERVGV 62
            LQREEELL++WWKEYAECSEGP    ++ KK +    A   E  R+A+L EVEEERVGV
Sbjct: 99  FLQREEELLTSWWKEYAECSEGPVGWPTTSKKFNTLENADSPEGGRAAQLREVEEERVGV 158

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFPVYWNG+NRRVLRGHWFARKGGLDWLP+REDVAEQLEIAYRSQ
Sbjct: 159 PVKGGLYEVDLVKRHCFPVYWNGENRRVLRGHWFARKGGLDWLPLREDVAEQLEIAYRSQ 218

Query: 123 VWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFS 182
           VWHRR F         +  +        LGLHALFTGEDDTWEAWLN+DASGFS+I+S S
Sbjct: 219 VWHRRMFQPSGLFAARVDLQGST-----LGLHALFTGEDDTWEAWLNIDASGFSNIVSLS 273

Query: 183 GNGIKLRRGYSQTISANPSK 202
           GN IKLRRGYS + SA P++
Sbjct: 274 GNEIKLRRGYSASHSAKPTQ 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146261|ref|XP_002325941.1| predicted protein [Populus trichocarpa] gi|222862816|gb|EEF00323.1| predicted protein [Populus trichocarpa]

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 139/200 (69%), Positives = 159/200 (79%), Gaps = 7/200 (3%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESV--RSAELYEVEEERVGV 62
            LQREEELLS+WWKEYAECSEGP    ++ KK D Q +    V  R+A+L+EVEEERVGV
Sbjct: 99  FLQREEELLSSWWKEYAECSEGPSGWPTTSKKIDTQENADSPVGGRAAQLHEVEEERVGV 158

Query: 63  PVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQ 122
           PVKGGLYEVDLV+RHCFPVYWNG+NRRVLRGHWFARKGGL WLP+REDVAEQLEIAY+SQ
Sbjct: 159 PVKGGLYEVDLVKRHCFPVYWNGENRRVLRGHWFARKGGLGWLPLREDVAEQLEIAYQSQ 218

Query: 123 VWHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFS 182
           VWHRRTF         +  +         GLHALFTGED+TWEAWLN+DASGFSSII+ S
Sbjct: 219 VWHRRTFQPSGLFAARVDLQGSTP-----GLHALFTGEDNTWEAWLNIDASGFSSIITLS 273

Query: 183 GNGIKLRRGYSQTISANPSK 202
            NGIKLRRGYS ++S  P++
Sbjct: 274 WNGIKLRRGYSASLSEKPTQ 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449490252|ref|XP_004158551.1| PREDICTED: SEC23-interacting protein-like [Cucumis sativus]

 Score =  285 bits (729), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 137/199 (68%), Positives = 156/199 (78%), Gaps = 7/199 (3%)

Query: 6   LQREEELLSNWWKEYAECSEGPRERASSIKKSDVQ--ASLTESVRSAELYEVEEERVGVP 63
           + REEELLS WWKEYAECSEGP+ERA S  + D Q   S ++  +   LY+VEEERVGVP
Sbjct: 1   MMREEELLSIWWKEYAECSEGPKERAGSSLRPDKQRNESTSDVAKLVNLYDVEEERVGVP 60

Query: 64  VKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQV 123
           VKGGLYEVDLV+RHCFPVYWN +NRRV+RGHWFARKGGLDWLP+REDVAEQLEIAYRS+V
Sbjct: 61  VKGGLYEVDLVKRHCFPVYWNAENRRVMRGHWFARKGGLDWLPLREDVAEQLEIAYRSRV 120

Query: 124 WHRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFSG 183
           W RRTF         +  +      +  GLHALFTGEDDTWEAWLNVDASGFSS+IS  G
Sbjct: 121 WRRRTFQPSGLFASRVDLQG-----FTPGLHALFTGEDDTWEAWLNVDASGFSSVISLGG 175

Query: 184 NGIKLRRGYSQTISANPSK 202
           NGIKLRRGYS + S  P++
Sbjct: 176 NGIKLRRGYSPSNSPKPTQ 194

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329893|ref|NP_174433.2| protein shoot gravitropism 2 (SGR2) [Arabidopsis thaliana] gi|16904659|dbj|BAB71959.1| shoot gravitropism 2 [Arabidopsis thaliana] gi|332193239|gb|AEE31360.1| protein shoot gravitropism 2 (SGR2) [Arabidopsis thaliana]

 Score =  279 bits (714), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 134/198 (67%), Positives = 156/198 (78%), Gaps = 7/198 (3%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPV 64
            LQRE+ELLS WWKEYAECSEGP+ + +S KKS    + +E+  S+ LYEVEEERVGVPV
Sbjct: 101 FLQREDELLSLWWKEYAECSEGPKLQVNSKKKS--IETPSEASVSSSLYEVEEERVGVPV 158

Query: 65  KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVW 124
           KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPI E V+EQLE+AYR++VW
Sbjct: 159 KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIPETVSEQLEVAYRNKVW 218

Query: 125 HRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFSGN 184
            RR+F         +  +        LGLHALFTGEDDTWEAWLNVD SGFS I+ ++GN
Sbjct: 219 RRRSFQPSGLFAARIDLQG-----SSLGLHALFTGEDDTWEAWLNVDPSGFSGIVGYTGN 273

Query: 185 GIKLRRGYSQTISANPSK 202
           GIKLRRGY+ + S  P++
Sbjct: 274 GIKLRRGYAGSYSPKPTQ 291

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12322534|gb|AAG51263.1|AC027135_4 unknown protein [Arabidopsis thaliana]

 Score =  279 bits (713), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 134/198 (67%), Positives = 156/198 (78%), Gaps = 7/198 (3%)

Query: 5   LLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPV 64
            LQRE+ELLS WWKEYAECSEGP+ + +S KKS    + +E+  S+ LYEVEEERVGVPV
Sbjct: 101 FLQREDELLSLWWKEYAECSEGPKLQVNSKKKS--IETPSEASVSSSLYEVEEERVGVPV 158

Query: 65  KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVW 124
           KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPI E V+EQLE+AYR++VW
Sbjct: 159 KGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIPETVSEQLEVAYRNKVW 218

Query: 125 HRRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDASGFSSIISFSGN 184
            RR+F         +  +        LGLHALFTGEDDTWEAWLNVD SGFS I+ ++GN
Sbjct: 219 RRRSFQPSGLFAARIDLQG-----SSLGLHALFTGEDDTWEAWLNVDPSGFSGIVGYTGN 273

Query: 185 GIKLRRGYSQTISANPSK 202
           GIKLRRGY+ + S  P++
Sbjct: 274 GIKLRRGYAGSYSPKPTQ 291

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	212
TAIR|locus:2028641	933	SGR2 "SHOOT GRAVITROPISM 2" [A	0.896	0.203	0.654	3.2e-65
ZFIN|ZDB-GENE-040724-18	861	ddhd1b "DDHD domain containing	0.358	0.088	0.380	7.3e-08
UNIPROTKB|Q8NEL9	900	DDHD1 "Phospholipase DDHD1" [H	0.429	0.101	0.360	4.9e-07
ZFIN|ZDB-GENE-030131-5259	977	sec23ip "SEC23 interacting pro	0.400	0.087	0.378	3.2e-06
UNIPROTKB|G3N1K0	835	DDHD1 "Phospholipase DDHD1" [B	0.306	0.077	0.410	3.3e-06
UNIPROTKB|F1N1C0	875	DDHD1 "Phospholipase DDHD1" [B	0.306	0.074	0.410	3.5e-06
UNIPROTKB|O46606	875	DDHD1 "Phospholipase DDHD1" [B	0.306	0.074	0.410	3.5e-06
UNIPROTKB|E2RE74	884	DDHD1 "Uncharacterized protein	0.287	0.069	0.434	4.7e-06
UNIPROTKB|E2RE68	910	DDHD1 "Uncharacterized protein	0.287	0.067	0.434	4.9e-06
POMBASE|SPAC20G8.02	757	SPAC20G8.02 "mitochondrial DDH	0.556	0.155	0.322	5.2e-06

TAIR|locus:2028641 SGR2 "SHOOT GRAVITROPISM 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
 Identities = 129/197 (65%), Positives = 147/197 (74%)

Query:     6 LQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVK 65
             LQRE+ELLS WWKEYAECSEGP+ + +S KKS ++     SV S+ LYEVEEERVGVPVK
Sbjct:   102 LQREDELLSLWWKEYAECSEGPKLQVNSKKKS-IETPSEASV-SSSLYEVEEERVGVPVK 159

Query:    66 GGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWH 125
             GGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPI E V+EQLE+AYR++VW 
Sbjct:   160 GGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKGGLDWLPIPETVSEQLEVAYRNKVWR 219

Query:   126 RRTFNLLDFLQLELTCKALLQYIYFLGLHALFTGEDDTWEAWLNVDAXXXXXXXXXXXNG 185
             RR+F         +  +        LGLHALFTGEDDTWEAWLNVD            NG
Sbjct:   220 RRSFQPSGLFAARIDLQGSS-----LGLHALFTGEDDTWEAWLNVDPSGFSGIVGYTGNG 274

Query:   186 IKLRRGYSQTISANPSK 202
             IKLRRGY+ + S  P++
Sbjct:   275 IKLRRGYAGSYSPKPTQ 291

GO:0005737 "cytoplasm" evidence=ISM

GO:0046872 "metal ion binding" evidence=IEA

GO:0009630 "gravitropism" evidence=IMP

GO:0009959 "negative gravitropism" evidence=IMP

GO:0008970 "phosphatidylcholine 1-acylhydrolase activity" evidence=ISS

GO:0009660 "amyloplast organization" evidence=IMP

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009590 "detection of gravity" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

ZFIN|ZDB-GENE-040724-18 ddhd1b "DDHD domain containing 1b" [Danio rerio (taxid:7955)]

 Score = 143 (55.4 bits), Expect = 7.3e-08, P = 7.3e-08
 Identities = 32/84 (38%), Positives = 50/84 (59%)

Query:    37 SDVQASLTESVRSAELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNG-DNRRVLRGHW 95
             +D   S  +SV  ++   V+     V V+GGLYEVD+  + C+PVYWN  D+  V+RG W
Sbjct:   212 ADAGCSTDDSVFRSDSVNVD----AVCVRGGLYEVDIKGKSCYPVYWNQQDHIPVMRGQW 267

Query:    96 FARKGGLDWLPIREDVAEQLEIAY 119
             F    G  WLP+ E+ ++ +E+ +
Sbjct:   268 FT--DGT-WLPLEEEDSDLIELEH 288

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q8NEL9 DDHD1 "Phospholipase DDHD1" [Homo sapiens (taxid:9606)]

 Score = 138 (53.6 bits), Expect = 4.9e-07, P = 4.9e-07
 Identities = 35/97 (36%), Positives = 47/97 (48%)

Query:    23 CSE-GPRERASSIKKSDVQASLTESVRSAELYEVEEERVG-VPVKGGLYEVDLVRRHCFP 80
             CS  GP   +      D      +S    E   VE   +  V V+GGLYEVD+ +  C+P
Sbjct:   216 CSPTGPASSSGEDDDEDRACGFCQSTTGHEPEMVELVNIEPVCVRGGLYEVDVTQGECYP 275

Query:    81 VYWN-GDNRRVLRGHWFARKGGLDWLPIREDVAEQLE 116
             VYWN  D   V+RG WF    G  W P+ E+ +  +E
Sbjct:   276 VYWNQADKIPVMRGQWFI--DGT-WQPLEEEESNLIE 309

GO:0046872 "metal ion binding" evidence=IEA

GO:0016042 "lipid catabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

ZFIN|ZDB-GENE-030131-5259 sec23ip "SEC23 interacting protein" [Danio rerio (taxid:7955)]

 Score = 129 (50.5 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
 Identities = 36/95 (37%), Positives = 48/95 (50%)

Query:    42 SLTESVRSAELY---EVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFAR 98
             S+ +S+R  E +   + + E V V   GG Y+V L  R    VYW  D   V R  WF  
Sbjct:   270 SILDSIRLEETFNSVQPDPESVIVCTDGGRYDVQLYDRTRTSVYWEEDPTEVRRCTWFY- 328

Query:    99 KGGLD--WLPIREDVAEQLEIAYRSQV----WHRR 127
             KG  D  ++P  ED +E+LE  Y+  V    WHRR
Sbjct:   329 KGDTDSRFIPYSEDFSEKLEAEYKKAVTTNQWHRR 363

GO:0046872 "metal ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G3N1K0 DDHD1 "Phospholipase DDHD1" [Bos taurus (taxid:9913)]

 Score = 132 (51.5 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 30/73 (41%), Positives = 42/73 (57%)

Query:    51 ELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIRE 109
             EL  +E     V V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+ E
Sbjct:   253 ELVNIER----VCVRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFI--DGT-WQPLEE 305

Query:   110 DVAEQLEIAYRSQ 122
             + +  +E  + S+
Sbjct:   306 EESNLIEQEHLSR 318

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1N1C0 DDHD1 "Phospholipase DDHD1" [Bos taurus (taxid:9913)]

 Score = 132 (51.5 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 30/73 (41%), Positives = 42/73 (57%)

Query:    51 ELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIRE 109
             EL  +E     V V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+ E
Sbjct:   253 ELVNIER----VCVRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFI--DGT-WQPLEE 305

Query:   110 DVAEQLEIAYRSQ 122
             + +  +E  + S+
Sbjct:   306 EESNLIEQEHLSR 318

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|O46606 DDHD1 "Phospholipase DDHD1" [Bos taurus (taxid:9913)]

 Score = 132 (51.5 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 30/73 (41%), Positives = 42/73 (57%)

Query:    51 ELYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPIRE 109
             EL  +E     V V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+ E
Sbjct:   253 ELVNIER----VCVRGGLYEVDVTQGECYPVYWNQSDKIPVMRGQWFI--DGT-WQPLEE 305

Query:   110 DVAEQLEIAYRSQ 122
             + +  +E  + S+
Sbjct:   306 EESNLIEQEHLSR 318

GO:0005737 "cytoplasm" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016042 "lipid catabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2RE74 DDHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 131 (51.2 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 30/69 (43%), Positives = 41/69 (59%)

Query:    53 YEVE-EERVGVP---VKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPI 107
             +E E EE V +    V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+
Sbjct:   254 HEPEMEELVNIERVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFI--DGT-WQPL 310

Query:   108 REDVAEQLE 116
              E+ +  +E
Sbjct:   311 EEEESNLIE 319

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2RE68 DDHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 131 (51.2 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 30/69 (43%), Positives = 41/69 (59%)

Query:    53 YEVE-EERVGVP---VKGGLYEVDLVRRHCFPVYWN-GDNRRVLRGHWFARKGGLDWLPI 107
             +E E EE V +    V+GGLYEVD+ +  C+PVYWN  D   V+RG WF    G  W P+
Sbjct:   254 HEPEMEELVNIERVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFI--DGT-WQPL 310

Query:   108 REDVAEQLE 116
              E+ +  +E
Sbjct:   311 EEEESNLIE 319

GO:0046872 "metal ion binding" evidence=IEA

POMBASE|SPAC20G8.02 SPAC20G8.02 "mitochondrial DDHD family phospholipase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 130 (50.8 bits), Expect = 5.2e-06, P = 5.2e-06
 Identities = 40/124 (32%), Positives = 57/124 (45%)

Query:    26 GPRERASSIKKSDVQASLTESVRSAELYEVEEERVGVPVKGG---LYEVDLVRRHCFPVY 82
             GP E   +       A  +E +  + L  VE +    PV      LY V++V R   P+Y
Sbjct:   112 GPTEIKKAKNFLPFSAEDSEHIEKSYLKAVENDGQSEPVNVNEDYLYSVNVVSRELSPIY 171

Query:    83 WNGDNRRVLRGHWFARKGGLDWL-PIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLELTC 141
             W+G   R+LRG WF  +G  D L P  E++A Q+E  Y +   +R   N  D    +   
Sbjct:   172 WDGPVYRILRGTWFFSRG--DKLYPCEENLATQVEEGYLNSCPYREFSNEKDSAAAQSKT 229

Query:   142 KALL 145
              ALL
Sbjct:   230 WALL 233

GO:0004620 "phospholipase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS;IDA

GO:0044242 "cellular lipid catabolic process" evidence=IC

GO:0046872 "metal ion binding" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	212
KOG2308	741	consensus Phosphatidic acid-preferring phospholipa	99.96
PF02825	72	WWE: WWE domain; InterPro: IPR004170 The WWE domai	94.56
smart00678	73	WWE Domain in Deltex and TRIP12 homologues. Possib	93.06

>KOG2308 consensus Phosphatidic acid-preferring phospholipase A1, contains DDHD domain [Lipid transport and metabolism; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.96  E-value=2.1e-30  Score=254.08  Aligned_cols=203  Identities=31%  Similarity=0.462  Sum_probs=157.2

Q ss_pred             ChhhHhhhHHHHHHHHHHHHHHhcCCCCCccCCCcccccccccccccccchhhhccC---cceeEeecCceeEEeccCee
Q 028207            1 MVEHLLQREEELLSNWWKEYAECSEGPRERASSIKKSDVQASLTESVRSAELYEVEE---ERVGVPVKGGLYEVDLVRRH   77 (212)
Q Consensus         1 ~~~~~~~~~~~~~~~~w~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~V~V~gglydVdl~~r~   77 (212)
                      +.++|+.|..+....||++|+.|..+..-.-+.-.+.... . -+.++++.|++..+   +...|+|+||+|+||+.+|+
T Consensus        88 ~~~~~~~~~~~~p~~~~r~~s~~~~~~~~~~~~~~~~~~~-p-~~~~ds~~le~~~~~~~e~~~v~v~gG~Y~Vd~~~r~  165 (741)
T KOG2308|consen   88 LHASFLPRDSEAPEYWVRQYSGVNPHEFYRLTSEYKSTWT-P-SEHSDSDDLEEGENDDQESPPVVVEGGLYEVDKENRK  165 (741)
T ss_pred             cccccccccccCcccccccccCCCCChhhhcccccccccc-c-cccccccccccccccCCccCceeecCCeeeeeeeccc
Confidence            3578999999999999999999888876654322222220 0 12247888887665   88899999999999999999


Q ss_pred             EeeeecCCCCcceEEeEeeeeCCCCceeeCCHHHHHHHHHHHhcccccccccccchhhhhh-hhhhhhhcccccceeeEe
Q 028207           78 CFPVYWNGDNRRVLRGHWFARKGGLDWLPIREDVAEQLEIAYRSQVWHRRTFNLLDFLQLE-LTCKALLQYIYFLGLHAL  156 (212)
Q Consensus        78 ~~PvYW~g~~~eVrRgtWF~~~~~~~~~P~~e~la~~LE~~y~~~~W~~~~~~p~~e~a~~-v~~~~~l~g~~~~~~h~L  156 (212)
                      |.||||+|+.++||||+||+++ +++|+||+|++|++||.+|++.+|.+...+.-.-.+++ +    .++| ...+.|++
T Consensus       166 ~~pvYW~~d~~ev~Rg~WF~~~-~~~~~P~~e~~s~qlE~~yl~~~~~~~~~~~~~~~~~s~~----s~~g-~~v~~~f~  239 (741)
T KOG2308|consen  166 CSPVYWSGDEKEVRRGTWFFDG-GSTLQPLEEELSEQLEAEYLNSFRTQELPENFTLFTASYI----SIHG-KPVVVSFK  239 (741)
T ss_pred             ccCCCCCCCcccceeeeeeecC-CCceeeccchhHHHHHHHHHHHhhhcccccccccccceee----eecC-CceEEEee
Confidence            9999999999999999999986 88999999999999999999988765554443322222 2    5888 77899999


Q ss_pred             eecCCCCceeeeeecCCCceeEEee---cCCceEEEeCccC--CCCCCCCcccEEEEEEe
Q 028207          157 FTGEDDTWEAWLNVDASGFSSIISF---SGNGIKLRRGYSQ--TISANPSKVLVLLLLVI  211 (212)
Q Consensus       157 f~~~~d~~~Awl~~D~~g~ss~L~~---~~~g~kL~RGY~e--~~ed~p~~IdHLVFVV~  211 (212)
                      ++++++.|+||.+.+....+...++   ...++.|.|||.+  .+.++|.+|+||||||-
T Consensus       240 ~~~~~~~w~a~~~~~~~~r~~~~g~~~~~~~~~~l~~~~~ee~~~~~k~~~v~hllf~vh  299 (741)
T KOG2308|consen  240 YTGNDDTWGAVDDVSLKSRSGEAGLERPVVVGRGLRRFLEEENDLASKPVPVDHLLFVVH  299 (741)
T ss_pred             ecCCCccccccccccccccccccccccccccccccchhhhhhccccCCCccchheeeeee
Confidence            9999997777765443322222222   2467788888877  88999999999999995

>PF02825 WWE: WWE domain; InterPro: IPR004170 The WWE domain is named after three of its conserved residues and is predicted to mediate specific protein-protein interactions in ubiquitin and ADP ribose conjugation systems

Probab=94.56  E-value=0.045  Score=38.71  Aligned_cols=29  Identities=28%  Similarity=0.488  Sum_probs=23.5

Q ss_pred             eEeeeeCCCCceeeCCHHHHHHHHHHHhc
Q 028207           93 GHWFARKGGLDWLPIREDVAEQLEIAYRS  121 (212)
Q Consensus        93 gtWF~~~~~~~~~P~~e~la~~LE~~y~~  121 (212)
                      ..|++.++++.|.||+++.+..||++|++
T Consensus         8 ~~W~w~~~~~~W~~Y~~~~~~~IE~a~~~   36 (72)
T PF02825_consen    8 YVWQWEDDDGGWHPYDPEVSEIIEEAYQN   36 (72)
T ss_dssp             EEEEEESETSSEEE--HHHHHHHHHHHHT
T ss_pred             EEEEEECCCCcEEeCCcHHHHHHHHHHHc
Confidence            46888755779999999999999999987

This domain is found as a tandem repeat at the N-terminal of Deltex, a cytosolic effector of Notch signalling thought to bind the N-terminal of the Notch receptor []. It is also found as an interaction module in protein ubiquination and ADP ribosylation proteins [].; PDB: 2A90_A 1UJR_A 2DK6_A 3V3L_B.

>smart00678 WWE Domain in Deltex and TRIP12 homologues

Probab=93.06  E-value=0.14  Score=36.63  Aligned_cols=28  Identities=29%  Similarity=0.520  Sum_probs=24.9

Q ss_pred             EeeeeCCCCceeeCCHHHHHHHHHHHhc
Q 028207           94 HWFARKGGLDWLPIREDVAEQLEIAYRS  121 (212)
Q Consensus        94 tWF~~~~~~~~~P~~e~la~~LE~~y~~  121 (212)
                      .|++.++.+.|.||+...+..||++|.+
T Consensus         2 ~W~w~~~~g~W~~Y~~~~~~~IE~ay~~   29 (73)
T smart00678        2 VWEYEGRNGKWWPYDPRVSEDIEEAYAA   29 (73)
T ss_pred             EEEEECCCCCeeeCChHHHHHHHHHHHc
Confidence            5888866668999999999999999986

Possibly involved in regulation of ubiquitin-mediated proteolysis.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	212
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 3e-08
 Identities = 45/320 (14%), Positives = 91/320 (28%), Gaps = 121/320 (37%)

Query: 2   VEHLLQREEELLSNWWKE-----------YAECSEGPRERASSIKKSDVQ-ASLTESVRS 49
           VE +L+   + L +  K            Y E  +          K +V        +R 
Sbjct: 83  VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ 142

Query: 50  AELYEVEEERVGVPVKG----G--------LYEVDLVRRHCFPVYW------NGDN---- 87
           A L E+   +  V + G    G             +  +  F ++W      N       
Sbjct: 143 A-LLELRPAK-NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE 200

Query: 88  -----RRVLRGHWFARKGGLDWLPIR-EDVAEQLEIAYRSQ-----------VWHRRTFN 130
                   +  +W +R      + +R   +  +L    +S+           V + + +N
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260

Query: 131 LLDFLQLELTCKALL--------------QYIYF--------------LGLHALFTGED- 161
             +      +CK LL                 +                 L   +     
Sbjct: 261 AFNL-----SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315

Query: 162 --------------------------DTWEAWLNVDASGFSSIISFSGNGIK---LRRGY 192
                                      TW+ W +V+    ++II  S N ++    R+ +
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375

Query: 193 SQ-TI---SAN-PSKVLVLL 207
            + ++   SA+ P+ +L L+
Sbjct: 376 DRLSVFPPSAHIPTILLSLI 395

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	212
2a90_A	240	Deltex protein; WWE domain, metal binding protein;	91.21
3v3l_A	85	E3 ubiquitin-protein ligase RNF146; HET: V3L; 1.65	89.22
1ujr_A	110	Hypothetical protein AK012080; WWE domain, structu	84.42

>2a90_A Deltex protein; WWE domain, metal binding protein; 2.15A {Drosophila melanogaster} SCOP: d.289.1.1 d.289.1.1

Probab=91.21  E-value=0.42  Score=41.52  Aligned_cols=54  Identities=20%  Similarity=0.190  Sum_probs=42.4

Q ss_pred             ceeEEeccCeeEeeeecCCC-----CcceEEe------------EeeeeC---C-CCceeeCCHHHHHHHHHHHhc
Q 028207           67 GLYEVDLVRRHCFPVYWNGD-----NRRVLRG------------HWFARK---G-GLDWLPIREDVAEQLEIAYRS  121 (212)
Q Consensus        67 glydVdl~~r~~~PvYW~g~-----~~eVrRg------------tWF~~~---~-~~~~~P~~e~la~~LE~~y~~  121 (212)
                      +.|-||+.+|...--= .|.     ...|||-            .|+..+   + .+.|.||++.++..||.+|..
T Consensus        68 ~~y~IDf~sMtQ~~~d-tg~~~~~~~r~VRR~~~~PsS~~g~g~vWeW~d~~~D~~G~W~~Y~~~vs~~IE~Ay~~  142 (240)
T 2a90_A           68 EQYYVNVRTMTQESEA-ETAGSGLLTIGVRRMFYAPSSPAGKGTKWEWSGGSADSNNDWRPYNMHVQSIIEDAWAR  142 (240)
T ss_dssp             TTCEEETTTTEEEC----------CCCBEEEEEECTTSHHHHTEEEEEECSSSSCCSSEEECCHHHHHHHHHHHHT
T ss_pred             CceEEeccccEEEeec-cCccccccceeeeeccccCCCcCCCccEEEEeCCCCCCCCceEECCHHHHHHHHHHHhc
Confidence            7799999999875422 555     7899993            788887   3 368999999999999999987

>3v3l_A E3 ubiquitin-protein ligase RNF146; HET: V3L; 1.65A {Homo sapiens}

Probab=89.22  E-value=0.34  Score=35.40  Aligned_cols=27  Identities=22%  Similarity=0.558  Sum_probs=23.9

Q ss_pred             EeeeeCCCCceeeCCHHHHHHHHHHHhc
Q 028207           94 HWFARKGGLDWLPIREDVAEQLEIAYRS  121 (212)
Q Consensus        94 tWF~~~~~~~~~P~~e~la~~LE~~y~~  121 (212)
                      .||+.+++ .|.+|++.++..||++|.+
T Consensus         6 ~W~w~~~~-GW~~Yd~~~s~~IE~af~~   32 (85)
T 3v3l_A            6 AWYYEGRN-GWWQYDERTSRELEDAFSK   32 (85)
T ss_dssp             EEEEECSS-SEEECCHHHHHHHHHHHHT
T ss_pred             EEEEeCCC-CceeCCHHHHHHHHHHHHh
Confidence            59998654 5999999999999999986

>1ujr_A Hypothetical protein AK012080; WWE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.289.1.1

Probab=84.42  E-value=0.75  Score=35.30  Aligned_cols=27  Identities=22%  Similarity=0.558  Sum_probs=23.7

Q ss_pred             EeeeeCCCCceeeCCHHHHHHHHHHHhc
Q 028207           94 HWFARKGGLDWLPIREDVAEQLEIAYRS  121 (212)
Q Consensus        94 tWF~~~~~~~~~P~~e~la~~LE~~y~~  121 (212)
                      .||+.+++ .|.+|++..+..||++|.+
T Consensus        31 ~W~w~gd~-GW~~Yd~~~s~~IE~Ay~~   57 (110)
T 1ujr_A           31 AWYYEGRN-GWWQYDERTSRELEDAFSK   57 (110)
T ss_dssp             EEEEECSS-SEEECCSHHHHHHHHHHHH
T ss_pred             EEEEeCCC-CCccCCHHHHHHHHHHHHc
Confidence            69998544 5999999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	212
d2a90a1	89	Deltex (Dx) {Fruit fly (Drosophila melanogaster) [	91.67
d1ujra_	110	RING finger protein 146 (Dactylidin) {Mouse (Mus m	89.31
d2a90a2	80	Deltex (Dx) {Fruit fly (Drosophila melanogaster) [	85.97

>d2a90a1 d.289.1.1 (A:43-131) Deltex (Dx) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: WWE domain
superfamily: WWE domain
family: WWE domain
domain: Deltex (Dx)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.67  E-value=0.064  Score=37.82  Aligned_cols=28  Identities=29%  Similarity=0.458  Sum_probs=24.3

Q ss_pred             eEeeeeCCCCceeeCCHHHHHHHHHHHhc
Q 028207           93 GHWFARKGGLDWLPIREDVAEQLEIAYRS  121 (212)
Q Consensus        93 gtWF~~~~~~~~~P~~e~la~~LE~~y~~  121 (212)
                      ..|++++ ++.|.||++..+..||++|.+
T Consensus         5 vVWeW~d-~g~W~~Y~~~~~~~IE~Ay~~   32 (89)
T d2a90a1           5 SVWEFES-RGKWLPYSPAVSQHLERAHAK   32 (89)
T ss_dssp             EEEEEEE-TTEEEECCHHHHHHHHHHHHT
T ss_pred             EEEEEcC-CCceecCCHHHHHHHHHHHhc
Confidence            3688875 468999999999999999975

>d1ujra_ d.289.1.1 (A:) RING finger protein 146 (Dactylidin) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: WWE domain
superfamily: WWE domain
family: WWE domain
domain: RING finger protein 146 (Dactylidin)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.31  E-value=0.13  Score=37.30  Aligned_cols=27  Identities=22%  Similarity=0.516  Sum_probs=23.6

Q ss_pred             EeeeeCCCCceeeCCHHHHHHHHHHHhc
Q 028207           94 HWFARKGGLDWLPIREDVAEQLEIAYRS  121 (212)
Q Consensus        94 tWF~~~~~~~~~P~~e~la~~LE~~y~~  121 (212)
                      .||+.++ +.|.||++.....||++|+.
T Consensus        31 ~W~~~~~-~gW~~Y~~~~~~~IE~ay~~   57 (110)
T d1ujra_          31 AWYYEGR-NGWWQYDERTSRELEDAFSK   57 (110)
T ss_dssp             EEEEECS-SSEEECCSHHHHHHHHHHHH
T ss_pred             EEEEeCC-CCEEECCHHHHHHHHHHHHc
Confidence            5999864 46999999999999999975

>d2a90a2 d.289.1.1 (A:132-211) Deltex (Dx) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: WWE domain
superfamily: WWE domain
family: WWE domain
domain: Deltex (Dx)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.97  E-value=0.31  Score=32.99  Aligned_cols=28  Identities=25%  Similarity=0.497  Sum_probs=22.0

Q ss_pred             Eeeee--CCCCceeeCCHHHHHHHHHHHhc
Q 028207           94 HWFAR--KGGLDWLPIREDVAEQLEIAYRS  121 (212)
Q Consensus        94 tWF~~--~~~~~~~P~~e~la~~LE~~y~~  121 (212)
                      .|+..  ++.+.|.||++..+..||++|++
T Consensus         3 qW~~~~~~~~g~W~~Y~~~~s~~iE~ay~~   32 (80)
T d2a90a2           3 EWSGGSADSNNDWRPYNMHVQSIIEDAWAR   32 (80)
T ss_dssp             EEECSSSSCCSSEEECCHHHHHHHHHHHHT
T ss_pred             EEeeeCCCCCCeEEECCHHHHHHHHHHHHc
Confidence            36643  23458999999999999999975