Citrus Sinensis ID: 028233


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-
MAGTGVSSSPAYSTSSPSQTPLKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDVSFF
cccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHccccccccEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccc
cccccccccccccccccccccccEEccccccccHHHHHHHHHHHHcccccccEEEEcccHHHHHHccEEEEccccEcccccccccccccccHcccccccEEEcHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccEccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccc
magtgvssspaystsspsqtplkrvgthngsfhcdeALGCFMIRLTDKffnaqivrsrdpkvlddLDAVLdvggvydpsndcydhhqkGFEEvfghgfstklssAGLVYKHFGKELIAKelnvdeghpdVHRLFLAVYKNFMEAIDAIDnginqydtdkppryvnntnlssrvgklnldwtepdqsaERENEAFQQGMDLagkefldvsff
magtgvssspaystsspsqtpLKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIvrsrdpkvldDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKElnvdeghpDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNtnlssrvgklnlDWTEPDQSAERENEAFQQGMDLAGKefldvsff
MAGtgvssspaystsspsqtpLKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKvlddldavldvggvYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDVSFF
***************************HNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTD****YV***********************************************
*************************GTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDVSFF
************************VGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWT***********AFQQGMDLAGKEFLDVSFF
*********************LKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDVSFF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAGTGVSSSPAYSTSSPSQTPLKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDVSFF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query211 2.2.26 [Sep-21-2011]
Q9JK81 380 UPF0160 protein MYG1, mit yes no 0.853 0.473 0.481 2e-42
Q9HB07 376 UPF0160 protein MYG1, mit yes no 0.938 0.526 0.463 4e-42
Q58DG1 381 UPF0160 protein MYG1, mit yes no 0.853 0.472 0.481 9e-42
Q641W2 381 UPF0160 protein MYG1, mit yes no 0.853 0.472 0.486 1e-41
O17606 340 UPF0160 protein C27H6.8 O yes no 0.834 0.517 0.459 1e-41
Q55G91 329 UPF0160 protein OS=Dictyo yes no 0.853 0.547 0.409 3e-39
Q9P7T6 324 UPF0160 protein C694.04c yes no 0.862 0.561 0.430 1e-37
P40093 338 UPF0160 protein YER156C O yes no 0.872 0.544 0.397 4e-33
Q9Z862 290 UPF0160 protein CPn_0489/ yes no 0.417 0.303 0.408 4e-12
O84391 289 UPF0160 protein CT_386 OS yes no 0.402 0.294 0.382 3e-10
>sp|Q9JK81|MYG1_MOUSE UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=2 SV=1 Back     alignment and function desciption
 Score =  172 bits (435), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/189 (48%), Positives = 126/189 (66%), Gaps = 9/189 (4%)

Query: 24  RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDCY 83
           R+GTHNG+FHCDEAL C ++RL  ++ NA+IVR+RDP+ L   D V+DVGG Y+P +  Y
Sbjct: 45  RIGTHNGTFHCDEALACALLRLLPEYANAEIVRTRDPEKLASCDIVVDVGGEYNPQSHRY 104

Query: 84  DHHQKGFEEVF-----GHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVY 138
           DHHQ+ F E       G  + TKLSSAGLVY HFG++L+A+ L   E    V  ++  +Y
Sbjct: 105 DHHQRTFTETMSSLCPGKPWQTKLSSAGLVYLHFGRKLLAQLLGTSEEDSVVDTIYDKMY 164

Query: 139 KNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGM 198
           +NF+E +DA+DNGI+Q+  +  PRY   T LS+RV +LN  W +P+Q  E     F++ M
Sbjct: 165 ENFVEEVDAVDNGISQW-AEGEPRYAMTTTLSARVARLNPTWNQPNQDTE---AGFRRAM 220

Query: 199 DLAGKEFLD 207
           DL  +EFL 
Sbjct: 221 DLVQEEFLQ 229





Mus musculus (taxid: 10090)
>sp|Q9HB07|MYG1_HUMAN UPF0160 protein MYG1, mitochondrial OS=Homo sapiens GN=C12orf10 PE=1 SV=2 Back     alignment and function description
>sp|Q58DG1|MYG1_BOVIN UPF0160 protein MYG1, mitochondrial OS=Bos taurus PE=2 SV=1 Back     alignment and function description
>sp|Q641W2|MYG1_RAT UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1 PE=1 SV=1 Back     alignment and function description
>sp|O17606|YK4P_CAEEL UPF0160 protein C27H6.8 OS=Caenorhabditis elegans GN=C27H6.8 PE=3 SV=2 Back     alignment and function description
>sp|Q55G91|U160_DICDI UPF0160 protein OS=Dictyostelium discoideum GN=DDB_G0267768 PE=3 SV=1 Back     alignment and function description
>sp|Q9P7T6|YIW4_SCHPO UPF0160 protein C694.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC694.04c PE=3 SV=1 Back     alignment and function description
>sp|P40093|YEY6_YEAST UPF0160 protein YER156C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YER156C PE=1 SV=1 Back     alignment and function description
>sp|Q9Z862|Y489_CHLPN UPF0160 protein CPn_0489/CP_0265/CPj0489/CpB0509 OS=Chlamydia pneumoniae GN=CPn_0489 PE=3 SV=2 Back     alignment and function description
>sp|O84391|Y386_CHLTR UPF0160 protein CT_386 OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=CT_386 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query211
255555723 373 Protein MYG1, putative [Ricinus communis 0.947 0.536 0.835 3e-97
356504252 369 PREDICTED: UPF0160 protein MYG1, mitocho 0.966 0.552 0.803 2e-94
449452196 345 PREDICTED: UPF0160 protein-like [Cucumis 0.895 0.547 0.851 4e-92
297805440 372 hypothetical protein ARALYDRAFT_330340 [ 0.981 0.556 0.778 6e-92
359806789 369 uncharacterized protein LOC100800706 [Gl 0.924 0.528 0.825 6e-92
79527307 373 Metal-dependent protein hydrolase [Arabi 0.981 0.554 0.774 2e-91
9757942 346 GAMM1 protein-like [Arabidopsis thaliana 0.981 0.598 0.774 4e-91
15146292 346 AT5g41970/MJC20_7 [Arabidopsis thaliana] 0.981 0.598 0.769 1e-90
224075220 345 predicted protein [Populus trichocarpa] 0.928 0.568 0.81 3e-90
225426621 361 PREDICTED: UPF0160 protein MYG1, mitocho 0.919 0.537 0.815 5e-89
>gi|255555723|ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis] gi|223541884|gb|EEF43430.1| Protein MYG1, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  360 bits (923), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 167/200 (83%), Positives = 183/200 (91%)

Query: 8   SSPAYSTSSPSQTPLKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLD 67
           SSPAYST SP   P KRVGTHNGSFHCDEALGCFMIRLT+KF NA+IVRSRD +VL+ LD
Sbjct: 36  SSPAYSTGSPCHAPPKRVGTHNGSFHCDEALGCFMIRLTNKFSNAEIVRSRDLQVLESLD 95

Query: 68  AVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGH 127
           AVLDVGGVYDP +D YDHHQKGFEEVFGHGF+TKLSSAGLVYKHFGKE+IAKEL +DEGH
Sbjct: 96  AVLDVGGVYDPVHDRYDHHQKGFEEVFGHGFTTKLSSAGLVYKHFGKEIIAKELQLDEGH 155

Query: 128 PDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSA 187
           P+VHRLFLA+YK+FMEAIDA+DNGINQYDTDKPPRYVNNT+LSSRVG+LNLDW EPDQS 
Sbjct: 156 PNVHRLFLAIYKSFMEAIDAVDNGINQYDTDKPPRYVNNTHLSSRVGRLNLDWIEPDQSP 215

Query: 188 ERENEAFQQGMDLAGKEFLD 207
           E+ENE FQ+ M LAG EFLD
Sbjct: 216 EKENEVFQRAMTLAGSEFLD 235




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504252|ref|XP_003520911.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|449452196|ref|XP_004143846.1| PREDICTED: UPF0160 protein-like [Cucumis sativus] gi|449509379|ref|XP_004163571.1| PREDICTED: UPF0160 protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297805440|ref|XP_002870604.1| hypothetical protein ARALYDRAFT_330340 [Arabidopsis lyrata subsp. lyrata] gi|297316440|gb|EFH46863.1| hypothetical protein ARALYDRAFT_330340 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|359806789|ref|NP_001241305.1| uncharacterized protein LOC100800706 [Glycine max] gi|255636959|gb|ACU18812.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|79527307|ref|NP_199012.2| Metal-dependent protein hydrolase [Arabidopsis thaliana] gi|332007365|gb|AED94748.1| Metal-dependent protein hydrolase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|9757942|dbj|BAB08430.1| GAMM1 protein-like [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15146292|gb|AAK83629.1| AT5g41970/MJC20_7 [Arabidopsis thaliana] gi|19699166|gb|AAL90949.1| AT5g41970/MJC20_7 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224075220|ref|XP_002304577.1| predicted protein [Populus trichocarpa] gi|222842009|gb|EEE79556.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225426621|ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query211
TAIR|locus:2165760 373 AT5G41970 "AT5G41970" [Arabido 0.895 0.506 0.757 9e-77
TAIR|locus:2082981 354 AT3G49320 "AT3G49320" [Arabido 0.895 0.533 0.640 1.1e-66
MGI|MGI:1929864 380 Myg1 "melanocyte proliferating 0.872 0.484 0.438 1.1e-39
RGD|1359237 381 Myg1 "melanocyte proliferating 0.872 0.482 0.443 1.8e-39
UNIPROTKB|Q9HB07 376 C12orf10 "UPF0160 protein MYG1 0.872 0.489 0.443 2.3e-39
UNIPROTKB|Q58DG1 381 Q58DG1 "UPF0160 protein MYG1, 0.872 0.482 0.438 2.9e-39
DICTYBASE|DDB_G0267768 329 DDB_G0267768 "metal-dependent 0.843 0.541 0.386 8.3e-35
CGD|CAL0002719 354 orf19.4532 [Candida albicans ( 0.876 0.522 0.382 1.3e-34
UNIPROTKB|Q59TJ7 354 CaO19.4532 "Putative uncharact 0.876 0.522 0.382 1.3e-34
ZFIN|ZDB-GENE-060312-32 381 myg1 "melanocyte proliferating 0.843 0.467 0.405 2.2e-34
TAIR|locus:2165760 AT5G41970 "AT5G41970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
 Identities = 144/190 (75%), Positives = 161/190 (84%)

Query:    22 LKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSND 81
             +K+VGTHNGSFHCDEALGCFMIRL DKF  A IVRSRDPK              YDP +D
Sbjct:    50 VKKVGTHNGSFHCDEALGCFMIRLVDKFSGADIVRSRDPKILAELDAVLDVGGVYDPEHD 109

Query:    82 CYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNF 141
              YDHHQKGFEEVFGHGF+TKLSSAGLVYKHFGKE+IAKELNV++ HPDV RLFLAVYK+F
Sbjct:   110 RYDHHQKGFEEVFGHGFNTKLSSAGLVYKHFGKEIIAKELNVEQDHPDVLRLFLAVYKSF 169

Query:   142 MEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLA 201
             MEAIDA+DNGIN+YDTD+PPRYVNNT+LS RVG+LNLDW +PDQS E+ENEAFQ+ M LA
Sbjct:   170 MEAIDAVDNGINRYDTDQPPRYVNNTHLSPRVGRLNLDWIDPDQSQEKENEAFQRAMALA 229

Query:   202 GKEFLD-VSF 210
             GKEFL+ V F
Sbjct:   230 GKEFLESVQF 239




GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0005739 "mitochondrion" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0006626 "protein targeting to mitochondrion" evidence=RCA
TAIR|locus:2082981 AT3G49320 "AT3G49320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:1929864 Myg1 "melanocyte proliferating gene 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1359237 Myg1 "melanocyte proliferating gene 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9HB07 C12orf10 "UPF0160 protein MYG1, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q58DG1 Q58DG1 "UPF0160 protein MYG1, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0267768 DDB_G0267768 "metal-dependent protein hydrolase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
CGD|CAL0002719 orf19.4532 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59TJ7 CaO19.4532 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060312-32 myg1 "melanocyte proliferating gene 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query211
pfam03690 315 pfam03690, UPF0160, Uncharacterized protein family 2e-95
COG4286 306 COG4286, COG4286, Uncharacterized conserved protei 2e-52
>gnl|CDD|217674 pfam03690, UPF0160, Uncharacterized protein family (UPF0160) Back     alignment and domain information
 Score =  280 bits (719), Expect = 2e-95
 Identities = 100/185 (54%), Positives = 132/185 (71%), Gaps = 5/185 (2%)

Query: 23  KRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDC 82
           K++GTH+GSFH DE L   M++L  ++ +A+IVR+RDP+VL+  D V+DVGGVYDP    
Sbjct: 1   KKIGTHSGSFHADEVLAVAMLKLLPEYKDAEIVRTRDPEVLEKCDIVVDVGGVYDPEKKR 60

Query: 83  YDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFM 142
           +DHHQ+GF E F     TKLSSAGLVYKHFGKE+I + L + +   DV  L+  VYK+F+
Sbjct: 61  FDHHQRGFPETFLREDGTKLSSAGLVYKHFGKEIIRELLKLLD-EEDVELLYDKVYKSFV 119

Query: 143 EAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAG 202
           E IDAIDNG++QYD    P+Y  NT+LS+RVG+LN  W EPD   E E+ AF + ++LAG
Sbjct: 120 EEIDAIDNGVSQYDG--EPKYKINTSLSARVGRLNPTWNEPDP--EDEDAAFLKAVELAG 175

Query: 203 KEFLD 207
            EF  
Sbjct: 176 SEFER 180


This family of proteins contains a large number of metal binding residues. The patterns are suggestive of a phosphoesterase function. The conserved DHH motif may mean this family is related to pfam01368. Length = 315

>gnl|CDD|226736 COG4286, COG4286, Uncharacterized conserved protein related to MYG1 family [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 211
KOG2948 327 consensus Predicted metal-binding protein [General 100.0
PF03690 318 UPF0160: Uncharacterised protein family (UPF0160); 100.0
COG4286 306 Uncharacterized conserved protein related to MYG1 100.0
>KOG2948 consensus Predicted metal-binding protein [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=3.5e-82  Score=564.22  Aligned_cols=185  Identities=58%  Similarity=1.021  Sum_probs=178.1

Q ss_pred             CceEEecCCCcchhHHHHHHHHHhccccCCceEEEccCCCCCCCccEEEecCCcccCCCCCCCCCCCCccccccCCCccc
Q 028233           22 LKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTK  101 (211)
Q Consensus        22 ~~~IgTH~G~FHaDEvLA~~mLr~l~~y~~a~IvRTRD~~~l~~cDiVvDVGg~YDp~~~rfDHHQr~F~~t~~~~~~~k  101 (211)
                      +++||||||+|||||||||+|||++|+|+||+|||||||++|++|||||||||+|||+++|||||||+|+|||+.++.||
T Consensus         4 ~~~i~THnG~FH~DEalAc~mLr~lp~f~dAeIvRtRd~~~l~s~DIvvDVGg~yDp~~~ryDHHQr~F~ETfs~~~~tK   83 (327)
T KOG2948|consen    4 TKKIGTHNGTFHCDEALACFMLRLLPEFKDAEIVRTRDPKVLESCDIVVDVGGVYDPEKKRYDHHQRGFFETFSPKYKTK   83 (327)
T ss_pred             CceEEecCCceehhHHHHHHHHHhccccCCCeeEecCCHHHHhhcCEEEecCccccccccccchhhhhhhhhcCCcccee
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhhhhccCccccCCCCCCccccCCChhhhhcccCCCCC
Q 028233          102 LSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWT  181 (211)
Q Consensus       102 lSSAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~IDaiDNGv~~~~~~~~~~y~~~~~Ls~rV~~lNP~W~  181 (211)
                      ||||||||||||++||+++++...++++++.+|.+||++|||++|||||||++|. +++|+|..+|+||+||++|||.||
T Consensus        84 LSSAGLIykhyG~~vi~~~l~~~~s~~~~~~l~~kvY~~Fve~~DAiDNGi~~y~-~~~Pry~~~~~l~~rv~~~N~~w~  162 (327)
T KOG2948|consen   84 LSSAGLIYKHYGREVISKILQNKVSSSDLDLLYDKVYKNFVEALDAIDNGISQYG-EIEPRYKSSTSLSHRVGRFNPDWN  162 (327)
T ss_pred             ecccceeHHHhhHHHHHHHhcccCChhHHHHHHHHHHHHHHHHhhccccchhhhc-CCCCccccccchHHHHhhcCCCcc
Confidence            9999999999999999999998889999999999999999999999999999994 789999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHhhhc
Q 028233          182 EPDQSAERENEAFQQGMDLAGKEFLDVS  209 (211)
Q Consensus       182 ~~~~~~~~~d~~F~~A~~~~~~ef~~~~  209 (211)
                      + + ++++++++|.+||+++|+||++..
T Consensus       163 e-~-~~~~~~e~F~~Am~~vg~ef~~~v  188 (327)
T KOG2948|consen  163 E-D-SDDDEDERFQRAMDLVGKEFVNSV  188 (327)
T ss_pred             c-C-cchhHHHHHHHHHHHHHHHHHHHH
Confidence            8 3 566899999999999999999864



>PF03690 UPF0160: Uncharacterised protein family (UPF0160); InterPro: IPR003226 The function of this domain is not known, but it is found in several uncharacterised proteins and a probable metal dependent protein hydrolase Back     alignment and domain information
>COG4286 Uncharacterized conserved protein related to MYG1 family [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query211
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.5 bits (117), Expect = 3e-07
 Identities = 19/194 (9%), Positives = 47/194 (24%), Gaps = 67/194 (34%)

Query: 44  RLTDKFFNAQIVRS-------RDPKVLDDLD------------AVLDVGGVYDPSNDCYD 84
            L     +             ++ K  +  +             V D       ++   D
Sbjct: 233 ELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292

Query: 85  HHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDE---------GHPDVHRLFL 135
           HH                           K L+ K L+             +P    +  
Sbjct: 293 HHSMTLTP------------------DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 136 AVYKNFMEAID------------AIDNGINQYD-TDKPPRYVN------NTNLSSRVGKL 176
              ++ +   D             I++ +N  +  +    +        + ++ + +  L
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL--L 392

Query: 177 NLDWTEPDQSAERE 190
           +L W +  +S    
Sbjct: 393 SLIWFDVIKSDVMV 406


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00