Citrus Sinensis ID: 028233
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 211 | ||||||
| 255555723 | 373 | Protein MYG1, putative [Ricinus communis | 0.947 | 0.536 | 0.835 | 3e-97 | |
| 356504252 | 369 | PREDICTED: UPF0160 protein MYG1, mitocho | 0.966 | 0.552 | 0.803 | 2e-94 | |
| 449452196 | 345 | PREDICTED: UPF0160 protein-like [Cucumis | 0.895 | 0.547 | 0.851 | 4e-92 | |
| 297805440 | 372 | hypothetical protein ARALYDRAFT_330340 [ | 0.981 | 0.556 | 0.778 | 6e-92 | |
| 359806789 | 369 | uncharacterized protein LOC100800706 [Gl | 0.924 | 0.528 | 0.825 | 6e-92 | |
| 79527307 | 373 | Metal-dependent protein hydrolase [Arabi | 0.981 | 0.554 | 0.774 | 2e-91 | |
| 9757942 | 346 | GAMM1 protein-like [Arabidopsis thaliana | 0.981 | 0.598 | 0.774 | 4e-91 | |
| 15146292 | 346 | AT5g41970/MJC20_7 [Arabidopsis thaliana] | 0.981 | 0.598 | 0.769 | 1e-90 | |
| 224075220 | 345 | predicted protein [Populus trichocarpa] | 0.928 | 0.568 | 0.81 | 3e-90 | |
| 225426621 | 361 | PREDICTED: UPF0160 protein MYG1, mitocho | 0.919 | 0.537 | 0.815 | 5e-89 |
| >gi|255555723|ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis] gi|223541884|gb|EEF43430.1| Protein MYG1, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 167/200 (83%), Positives = 183/200 (91%)
Query: 8 SSPAYSTSSPSQTPLKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLD 67
SSPAYST SP P KRVGTHNGSFHCDEALGCFMIRLT+KF NA+IVRSRD +VL+ LD
Sbjct: 36 SSPAYSTGSPCHAPPKRVGTHNGSFHCDEALGCFMIRLTNKFSNAEIVRSRDLQVLESLD 95
Query: 68 AVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGH 127
AVLDVGGVYDP +D YDHHQKGFEEVFGHGF+TKLSSAGLVYKHFGKE+IAKEL +DEGH
Sbjct: 96 AVLDVGGVYDPVHDRYDHHQKGFEEVFGHGFTTKLSSAGLVYKHFGKEIIAKELQLDEGH 155
Query: 128 PDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSA 187
P+VHRLFLA+YK+FMEAIDA+DNGINQYDTDKPPRYVNNT+LSSRVG+LNLDW EPDQS
Sbjct: 156 PNVHRLFLAIYKSFMEAIDAVDNGINQYDTDKPPRYVNNTHLSSRVGRLNLDWIEPDQSP 215
Query: 188 ERENEAFQQGMDLAGKEFLD 207
E+ENE FQ+ M LAG EFLD
Sbjct: 216 EKENEVFQRAMTLAGSEFLD 235
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504252|ref|XP_003520911.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449452196|ref|XP_004143846.1| PREDICTED: UPF0160 protein-like [Cucumis sativus] gi|449509379|ref|XP_004163571.1| PREDICTED: UPF0160 protein-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297805440|ref|XP_002870604.1| hypothetical protein ARALYDRAFT_330340 [Arabidopsis lyrata subsp. lyrata] gi|297316440|gb|EFH46863.1| hypothetical protein ARALYDRAFT_330340 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|359806789|ref|NP_001241305.1| uncharacterized protein LOC100800706 [Glycine max] gi|255636959|gb|ACU18812.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|79527307|ref|NP_199012.2| Metal-dependent protein hydrolase [Arabidopsis thaliana] gi|332007365|gb|AED94748.1| Metal-dependent protein hydrolase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|9757942|dbj|BAB08430.1| GAMM1 protein-like [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|15146292|gb|AAK83629.1| AT5g41970/MJC20_7 [Arabidopsis thaliana] gi|19699166|gb|AAL90949.1| AT5g41970/MJC20_7 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|224075220|ref|XP_002304577.1| predicted protein [Populus trichocarpa] gi|222842009|gb|EEE79556.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225426621|ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 211 | ||||||
| TAIR|locus:2165760 | 373 | AT5G41970 "AT5G41970" [Arabido | 0.895 | 0.506 | 0.757 | 9e-77 | |
| TAIR|locus:2082981 | 354 | AT3G49320 "AT3G49320" [Arabido | 0.895 | 0.533 | 0.640 | 1.1e-66 | |
| MGI|MGI:1929864 | 380 | Myg1 "melanocyte proliferating | 0.872 | 0.484 | 0.438 | 1.1e-39 | |
| RGD|1359237 | 381 | Myg1 "melanocyte proliferating | 0.872 | 0.482 | 0.443 | 1.8e-39 | |
| UNIPROTKB|Q9HB07 | 376 | C12orf10 "UPF0160 protein MYG1 | 0.872 | 0.489 | 0.443 | 2.3e-39 | |
| UNIPROTKB|Q58DG1 | 381 | Q58DG1 "UPF0160 protein MYG1, | 0.872 | 0.482 | 0.438 | 2.9e-39 | |
| DICTYBASE|DDB_G0267768 | 329 | DDB_G0267768 "metal-dependent | 0.843 | 0.541 | 0.386 | 8.3e-35 | |
| CGD|CAL0002719 | 354 | orf19.4532 [Candida albicans ( | 0.876 | 0.522 | 0.382 | 1.3e-34 | |
| UNIPROTKB|Q59TJ7 | 354 | CaO19.4532 "Putative uncharact | 0.876 | 0.522 | 0.382 | 1.3e-34 | |
| ZFIN|ZDB-GENE-060312-32 | 381 | myg1 "melanocyte proliferating | 0.843 | 0.467 | 0.405 | 2.2e-34 |
| TAIR|locus:2165760 AT5G41970 "AT5G41970" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 144/190 (75%), Positives = 161/190 (84%)
Query: 22 LKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSND 81
+K+VGTHNGSFHCDEALGCFMIRL DKF A IVRSRDPK YDP +D
Sbjct: 50 VKKVGTHNGSFHCDEALGCFMIRLVDKFSGADIVRSRDPKILAELDAVLDVGGVYDPEHD 109
Query: 82 CYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNF 141
YDHHQKGFEEVFGHGF+TKLSSAGLVYKHFGKE+IAKELNV++ HPDV RLFLAVYK+F
Sbjct: 110 RYDHHQKGFEEVFGHGFNTKLSSAGLVYKHFGKEIIAKELNVEQDHPDVLRLFLAVYKSF 169
Query: 142 MEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLA 201
MEAIDA+DNGIN+YDTD+PPRYVNNT+LS RVG+LNLDW +PDQS E+ENEAFQ+ M LA
Sbjct: 170 MEAIDAVDNGINRYDTDQPPRYVNNTHLSPRVGRLNLDWIDPDQSQEKENEAFQRAMALA 229
Query: 202 GKEFLD-VSF 210
GKEFL+ V F
Sbjct: 230 GKEFLESVQF 239
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| TAIR|locus:2082981 AT3G49320 "AT3G49320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| MGI|MGI:1929864 Myg1 "melanocyte proliferating gene 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1359237 Myg1 "melanocyte proliferating gene 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9HB07 C12orf10 "UPF0160 protein MYG1, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q58DG1 Q58DG1 "UPF0160 protein MYG1, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0267768 DDB_G0267768 "metal-dependent protein hydrolase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| CGD|CAL0002719 orf19.4532 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q59TJ7 CaO19.4532 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-060312-32 myg1 "melanocyte proliferating gene 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 211 | |||
| pfam03690 | 315 | pfam03690, UPF0160, Uncharacterized protein family | 2e-95 | |
| COG4286 | 306 | COG4286, COG4286, Uncharacterized conserved protei | 2e-52 |
| >gnl|CDD|217674 pfam03690, UPF0160, Uncharacterized protein family (UPF0160) | Back alignment and domain information |
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Score = 280 bits (719), Expect = 2e-95
Identities = 100/185 (54%), Positives = 132/185 (71%), Gaps = 5/185 (2%)
Query: 23 KRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDC 82
K++GTH+GSFH DE L M++L ++ +A+IVR+RDP+VL+ D V+DVGGVYDP
Sbjct: 1 KKIGTHSGSFHADEVLAVAMLKLLPEYKDAEIVRTRDPEVLEKCDIVVDVGGVYDPEKKR 60
Query: 83 YDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFM 142
+DHHQ+GF E F TKLSSAGLVYKHFGKE+I + L + + DV L+ VYK+F+
Sbjct: 61 FDHHQRGFPETFLREDGTKLSSAGLVYKHFGKEIIRELLKLLD-EEDVELLYDKVYKSFV 119
Query: 143 EAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAG 202
E IDAIDNG++QYD P+Y NT+LS+RVG+LN W EPD E E+ AF + ++LAG
Sbjct: 120 EEIDAIDNGVSQYDG--EPKYKINTSLSARVGRLNPTWNEPDP--EDEDAAFLKAVELAG 175
Query: 203 KEFLD 207
EF
Sbjct: 176 SEFER 180
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This family of proteins contains a large number of metal binding residues. The patterns are suggestive of a phosphoesterase function. The conserved DHH motif may mean this family is related to pfam01368. Length = 315 |
| >gnl|CDD|226736 COG4286, COG4286, Uncharacterized conserved protein related to MYG1 family [Function unknown] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 211 | |||
| KOG2948 | 327 | consensus Predicted metal-binding protein [General | 100.0 | |
| PF03690 | 318 | UPF0160: Uncharacterised protein family (UPF0160); | 100.0 | |
| COG4286 | 306 | Uncharacterized conserved protein related to MYG1 | 100.0 |
| >KOG2948 consensus Predicted metal-binding protein [General function prediction only] | Back alignment and domain information |
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Probab=100.00 E-value=3.5e-82 Score=564.22 Aligned_cols=185 Identities=58% Similarity=1.021 Sum_probs=178.1
Q ss_pred CceEEecCCCcchhHHHHHHHHHhccccCCceEEEccCCCCCCCccEEEecCCcccCCCCCCCCCCCCccccccCCCccc
Q 028233 22 LKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTK 101 (211)
Q Consensus 22 ~~~IgTH~G~FHaDEvLA~~mLr~l~~y~~a~IvRTRD~~~l~~cDiVvDVGg~YDp~~~rfDHHQr~F~~t~~~~~~~k 101 (211)
+++||||||+|||||||||+|||++|+|+||+|||||||++|++|||||||||+|||+++|||||||+|+|||+.++.||
T Consensus 4 ~~~i~THnG~FH~DEalAc~mLr~lp~f~dAeIvRtRd~~~l~s~DIvvDVGg~yDp~~~ryDHHQr~F~ETfs~~~~tK 83 (327)
T KOG2948|consen 4 TKKIGTHNGTFHCDEALACFMLRLLPEFKDAEIVRTRDPKVLESCDIVVDVGGVYDPEKKRYDHHQRGFFETFSPKYKTK 83 (327)
T ss_pred CceEEecCCceehhHHHHHHHHHhccccCCCeeEecCCHHHHhhcCEEEecCccccccccccchhhhhhhhhcCCcccee
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhhhhccCccccCCCCCCccccCCChhhhhcccCCCCC
Q 028233 102 LSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWT 181 (211)
Q Consensus 102 lSSAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~IDaiDNGv~~~~~~~~~~y~~~~~Ls~rV~~lNP~W~ 181 (211)
||||||||||||++||+++++...++++++.+|.+||++|||++|||||||++|. +++|+|..+|+||+||++|||.||
T Consensus 84 LSSAGLIykhyG~~vi~~~l~~~~s~~~~~~l~~kvY~~Fve~~DAiDNGi~~y~-~~~Pry~~~~~l~~rv~~~N~~w~ 162 (327)
T KOG2948|consen 84 LSSAGLIYKHYGREVISKILQNKVSSSDLDLLYDKVYKNFVEALDAIDNGISQYG-EIEPRYKSSTSLSHRVGRFNPDWN 162 (327)
T ss_pred ecccceeHHHhhHHHHHHHhcccCChhHHHHHHHHHHHHHHHHhhccccchhhhc-CCCCccccccchHHHHhhcCCCcc
Confidence 9999999999999999999998889999999999999999999999999999994 789999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHhhhc
Q 028233 182 EPDQSAERENEAFQQGMDLAGKEFLDVS 209 (211)
Q Consensus 182 ~~~~~~~~~d~~F~~A~~~~~~ef~~~~ 209 (211)
+ + ++++++++|.+||+++|+||++..
T Consensus 163 e-~-~~~~~~e~F~~Am~~vg~ef~~~v 188 (327)
T KOG2948|consen 163 E-D-SDDDEDERFQRAMDLVGKEFVNSV 188 (327)
T ss_pred c-C-cchhHHHHHHHHHHHHHHHHHHHH
Confidence 8 3 566899999999999999999864
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| >PF03690 UPF0160: Uncharacterised protein family (UPF0160); InterPro: IPR003226 The function of this domain is not known, but it is found in several uncharacterised proteins and a probable metal dependent protein hydrolase | Back alignment and domain information |
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| >COG4286 Uncharacterized conserved protein related to MYG1 family [Function unknown] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 211 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-07 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 49.5 bits (117), Expect = 3e-07
Identities = 19/194 (9%), Positives = 47/194 (24%), Gaps = 67/194 (34%)
Query: 44 RLTDKFFNAQIVRS-------RDPKVLDDLD------------AVLDVGGVYDPSNDCYD 84
L + ++ K + + V D ++ D
Sbjct: 233 ELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292
Query: 85 HHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDE---------GHPDVHRLFL 135
HH K L+ K L+ +P +
Sbjct: 293 HHSMTLTP------------------DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334
Query: 136 AVYKNFMEAID------------AIDNGINQYD-TDKPPRYVN------NTNLSSRVGKL 176
++ + D I++ +N + + + + ++ + + L
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL--L 392
Query: 177 NLDWTEPDQSAERE 190
+L W + +S
Sbjct: 393 SLIWFDVIKSDVMV 406
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00