Citrus Sinensis ID: 028272


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-
MSHSSGTDMALNFSTASLHAWNGVSLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEGDNFASSRYYYYSYYVGQSSIWVIVPMLIATRYWIKIHAICKRLQDKKVTKVG
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHEEEEcEEEEEccccccccccHHHHHHHHHHccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccEEEEEccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccc
cccccccccHcccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccEEEEcccccccccHHHHHHHHHHHHccccHccccccEEEEHHHHHHHHcHHHHHHHHHHHHcccccHHEEEEEEHHHHHcHHHHHcHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
MSHSSGTDMALNFSTASLHAWNGVSLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLIHvfqegyyvftpdlfndnspnFMAEIWKEYskgdsryatrhtsVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFlegdnfassRYYYYSYYVGQSSIWVIVPMLIATRYWIKIHAICKRlqdkkvtkvg
MSHSSGTDMALNFSTASLHAWNGVSLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEGDNFASSRYYYYSYYVGQSSIWVIVPMLIATRYWIKIHAICkrlqdkkvtkvg
MSHSSGTDMALNFSTASLHAWNGVSLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEGDNFAssryyyysyyvgqssIWVIVPMLIATRYWIKIHAICKRLQDKKVTKVG
**********LNFSTASLHAWNGVSLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEGDNFASSRYYYYSYYVGQSSIWVIVPMLIATRYWIKIHAICKRL*********
******T**ALNFSTASLHAWNGVSLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEGDNFASSRYYYYSYYVGQSSIWVIVPMLIATRYWIKI****************
********MALNFSTASLHAWNGVSLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEGDNFASSRYYYYSYYVGQSSIWVIVPMLIATRYWIKIHAICKRLQDKKVTKVG
********MALNFSTASLHAWNGVSLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEGDNFASSRYYYYSYYVGQSSIWVIVPMLIATRYWIKIHAICKRLQDK******
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSHSSGTDMALNFSTASLHAWNGVSLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEGDNFASSRYYYYSYYVGQSSIWVIVPMLIATRYWIKIHAICKRLQDKKVTKVG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query211 2.2.26 [Sep-21-2011]
O48962223 Probable 3-beta-hydroxyst yes no 0.734 0.695 0.554 4e-52
Q9FTZ2219 Probable 3-beta-hydroxyst yes no 0.843 0.812 0.456 5e-47
P70245230 3-beta-hydroxysteroid-Del yes no 0.848 0.778 0.320 4e-24
Q9JJ46230 3-beta-hydroxysteroid-Del yes no 0.933 0.856 0.302 6e-24
Q15125230 3-beta-hydroxysteroid-Del yes no 0.734 0.673 0.333 1e-23
Q60490229 3-beta-hydroxysteroid-Del yes no 0.810 0.746 0.316 1e-23
Q9D0P0206 Emopamil-binding protein- no no 0.744 0.762 0.293 2e-17
Q9BY08206 Emopamil-binding protein- no no 0.796 0.815 0.268 2e-15
Q55E32219 Probable 3-beta-hydroxyst yes no 0.715 0.689 0.270 5e-10
>sp|O48962|EBP_ARATH Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1 Back     alignment and function desciption
 Score =  204 bits (519), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 86/155 (55%), Positives = 122/155 (78%)

Query: 41  QAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRYATR 100
           + K+K+++LL+CWW  TGL HV  EGY+VF+P+ F DN+  ++AE+WKEYSKGDSRY  R
Sbjct: 49  RKKAKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGR 108

Query: 101 HTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEGD 160
            ++V+ +E + ++++GP SLLA YA+AK+KSY Y+ Q AIS+ QLYG + YF+TA LEGD
Sbjct: 109 DSAVVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGD 168

Query: 161 NFASSRYYYYSYYVGQSSIWVIVPMLIATRYWIKI 195
           NFA++ +YYYSYY+G +  WV++P LI+ R W KI
Sbjct: 169 NFATNSFYYYSYYIGANCWWVLIPSLISFRCWKKI 203




Catalyzes the conversion of Delta(8)-sterols to their corresponding Delta(7)-isomers.
Arabidopsis thaliana (taxid: 3702)
EC: 5EC: .EC: 3EC: .EC: 3EC: .EC: 5
>sp|Q9FTZ2|EBP_ORYSJ Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1 Back     alignment and function description
>sp|P70245|EBP_MOUSE 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3 Back     alignment and function description
>sp|Q9JJ46|EBP_RAT 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3 Back     alignment and function description
>sp|Q15125|EBP_HUMAN 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3 Back     alignment and function description
>sp|Q60490|EBP_CAVPO 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 Back     alignment and function description
>sp|Q9D0P0|EBPL_MOUSE Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1 Back     alignment and function description
>sp|Q9BY08|EBPL_HUMAN Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1 Back     alignment and function description
>sp|Q55E32|EBP_DICDI Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Dictyostelium discoideum GN=ebp PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query211
255543264220 sterol isomerase, putative [Ricinus comm 0.966 0.927 0.488 3e-53
356531218219 PREDICTED: probable 3-beta-hydroxysteroi 0.867 0.835 0.518 3e-52
255648367219 unknown [Glycine max] 0.867 0.835 0.518 3e-52
295368128217 putative C-8,7 sterol isomerase [Gossypi 0.819 0.797 0.531 7e-52
297844972220 hypothetical protein ARALYDRAFT_472231 [ 0.800 0.768 0.523 1e-51
388517313225 unknown [Lotus japonicus] 0.933 0.875 0.482 2e-51
224075427220 predicted protein [Populus trichocarpa] 0.819 0.786 0.528 7e-51
4098989223 phenylalkylamine binding protein homolog 0.734 0.695 0.554 1e-50
15223758223 cholestenol delta-isomerase [Arabidopsis 0.734 0.695 0.554 2e-50
21554213223 C-8,7 sterol isomerase [Arabidopsis thal 0.734 0.695 0.554 2e-50
>gi|255543264|ref|XP_002512695.1| sterol isomerase, putative [Ricinus communis] gi|223548656|gb|EEF50147.1| sterol isomerase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 103/211 (48%), Positives = 148/211 (70%), Gaps = 7/211 (3%)

Query: 7   TDMALN------FSTASLHAWNGVSLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLI 60
           TD+ L        S +++ A  G S L+++ + W ISG S+  +KI+R L+CWWA TGL 
Sbjct: 11  TDLKLEDYVPVFLSQSTILAVFGTSSLVLVSLVWFISGSSRKAAKIDRWLMCWWAFTGLT 70

Query: 61  HVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSL 120
           H+  EGY+VF+P+ + D +  ++AE+WKEYSKGDSRYA R ++V+ +E + +++ GP SL
Sbjct: 71  HIILEGYFVFSPEFYKDKTSFYLAEVWKEYSKGDSRYAARDSAVVAVEGLTAVLEGPASL 130

Query: 121 LAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEGDNFASSRYYYYSYYVGQSSIW 180
           LA YA+A  KSY YI QFAIS+ QLYGT  YFLT +L+G N+ASS YY+Y+YY+G ++ W
Sbjct: 131 LAVYAIAAGKSYSYILQFAISLGQLYGTAVYFLTPYLDGYNYASSPYYHYAYYIGANASW 190

Query: 181 VIVPMLIATRYWIKIHAICKRLQDKKVTKVG 211
           V++P LI  R W KI A   ++Q ++ TK G
Sbjct: 191 VVIPSLICIRSWKKICA-AFQVQGQRKTKSG 220




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531218|ref|XP_003534175.1| PREDICTED: probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase-like [Glycine max] Back     alignment and taxonomy information
>gi|255648367|gb|ACU24634.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|295368128|gb|ADG02944.1| putative C-8,7 sterol isomerase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|297844972|ref|XP_002890367.1| hypothetical protein ARALYDRAFT_472231 [Arabidopsis lyrata subsp. lyrata] gi|297336209|gb|EFH66626.1| hypothetical protein ARALYDRAFT_472231 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|388517313|gb|AFK46718.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|224075427|ref|XP_002304628.1| predicted protein [Populus trichocarpa] gi|222842060|gb|EEE79607.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|4098989|gb|AAD04752.1| phenylalkylamine binding protein homolog [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15223758|ref|NP_173433.1| cholestenol delta-isomerase [Arabidopsis thaliana] gi|18202046|sp|O48962.1|EBP_ARATH RecName: Full=Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase; AltName: Full=Cholestenol Delta-isomerase; AltName: Full=Delta(8)-Delta(7) sterol isomerase; Short=D8-D7 sterol isomerase gi|8778994|gb|AAF79909.1|AC022472_18 Identical to C-8,7 sterol isomerase from Arabidopsis thaliana gb|AF030357. ESTs gb|AI998831, gb|AA585846, gb|T22967 come from this gene [Arabidopsis thaliana] gi|12248039|gb|AAG50111.1|AF334733_1 putative C-8,7 sterol isomerase [Arabidopsis thaliana] gi|2772934|gb|AAD03489.1| C-8,7 sterol isomerase [Arabidopsis thaliana] gi|110736759|dbj|BAF00341.1| C-8,7 sterol isomerase [Arabidopsis thaliana] gi|332191807|gb|AEE29928.1| cholestenol delta-isomerase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21554213|gb|AAM63292.1| C-8,7 sterol isomerase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query211
TAIR|locus:2198626223 HYD1 "HYDRA1" [Arabidopsis tha 0.867 0.820 0.470 8.8e-47
ZFIN|ZDB-GENE-040718-12232 ebp "emopamil binding protein 0.834 0.758 0.298 3.3e-24
UNIPROTKB|D0G6S5230 EBP "Emopamil binding protein 0.848 0.778 0.283 6.1e-23
MGI|MGI:107822230 Ebp "phenylalkylamine Ca2+ ant 0.848 0.778 0.304 1.3e-22
UNIPROTKB|Q15125230 EBP "3-beta-hydroxysteroid-Del 0.616 0.565 0.362 2.6e-22
RGD|620957230 Ebp "emopamil binding protein 0.933 0.856 0.293 3.4e-22
UNIPROTKB|Q3ZBT8230 EBP "Uncharacterized protein" 0.862 0.791 0.308 4.3e-22
UNIPROTKB|E2QYH5230 EBP "Uncharacterized protein" 0.630 0.578 0.352 4.9e-21
UNIPROTKB|E2RDU6230 E2RDU6 "Uncharacterized protei 0.881 0.808 0.291 7.2e-20
UNIPROTKB|C9JJ78160 EBP "3-beta-hydroxysteroid-Del 0.554 0.731 0.352 6.5e-19
TAIR|locus:2198626 HYD1 "HYDRA1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 87/185 (47%), Positives = 124/185 (67%)

Query:    25 SLLLIIFVTWIISGMSQAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMA 84
             S LL++ + W++ G  + K+K+++LL+CWW  TGL HV  EGY+VF+P+ F DN+  ++A
Sbjct:    35 SSLLVVSLVWLLFG--RKKAKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLA 92

Query:    85 EIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQ 144
             E+WKEYSKGDSRY  R ++V+ +E + ++++GP SLLA YA+AK+KSY Y+ Q AIS+ Q
Sbjct:    93 EVWKEYSKGDSRYVGRDSAVVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQ 152

Query:   145 LYGTIQYFLTAFLEGDNFAXXXXXXXXXXXXXXXIWVIVPMLIATRYWIKIHAICKRLQD 204
             LYG + YF+TA LEGDNFA                WV++P LI+ R W KI A      +
Sbjct:   153 LYGCLVYFITAILEGDNFATNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAAAAIANN 212

Query:   205 KKVTK 209
                TK
Sbjct:   213 NVETK 217




GO:0016125 "sterol metabolic process" evidence=IEA
GO:0047750 "cholestenol delta-isomerase activity" evidence=IEA
GO:0016126 "sterol biosynthetic process" evidence=RCA;TAS
GO:0005886 "plasma membrane" evidence=IDA
GO:0060964 "regulation of gene silencing by miRNA" evidence=IMP
GO:0006084 "acetyl-CoA metabolic process" evidence=RCA
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA
GO:0019932 "second-messenger-mediated signaling" evidence=RCA
GO:0000247 "C-8 sterol isomerase activity" evidence=IMP
ZFIN|ZDB-GENE-040718-12 ebp "emopamil binding protein (sterol isomerase)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|D0G6S5 EBP "Emopamil binding protein (Sterol isomerase)" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:107822 Ebp "phenylalkylamine Ca2+ antagonist (emopamil) binding protein" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q15125 EBP "3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|620957 Ebp "emopamil binding protein (sterol isomerase)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q3ZBT8 EBP "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QYH5 EBP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2RDU6 E2RDU6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|C9JJ78 EBP "3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9JJ46EBP_RAT5, ., 3, ., 3, ., 50.30280.93360.8565yesno
O48962EBP_ARATH5, ., 3, ., 3, ., 50.55480.73450.6950yesno
Q9FTZ2EBP_ORYSJ5, ., 3, ., 3, ., 50.45600.84360.8127yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query211
pfam05241193 pfam05241, EBP, Emopamil binding protein 1e-46
>gnl|CDD|218520 pfam05241, EBP, Emopamil binding protein Back     alignment and domain information
 Score =  152 bits (385), Expect = 1e-46
 Identities = 65/179 (36%), Positives = 109/179 (60%), Gaps = 7/179 (3%)

Query: 23  GVSLLLIIFVTWIISGMSQAK-SKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPN 81
            +  L ++   +++S   + + SK +RL   W+ L GLIH+F EGY+V     F+ +S +
Sbjct: 6   LLGCLALLAAAYLLSRRLRPRLSKGDRLAFLWFLLDGLIHLFLEGYFVLNH-AFSASSQD 64

Query: 82  FMAEIWKEYSKGDSRYATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAIS 141
             A++WKEY+K DSRY T    V+ +E++  ++ GPL LL AYA+AK K  R+  Q  +S
Sbjct: 65  LFAQLWKEYAKSDSRYLTADPFVVSVETITVLLWGPLCLLVAYAIAKDKPLRHFLQIVVS 124

Query: 142 IAQLYGTIQYFLTAFLEG----DNFA-SSRYYYYSYYVGQSSIWVIVPMLIATRYWIKI 195
           + QLYGT+ YF T +L+G      F+     Y++ Y+V  +S+W+++P L+  + W ++
Sbjct: 125 VGQLYGTVLYFATEWLDGFVHGREFSTPEPLYFWFYFVFMNSLWIVIPSLLLWQSWKEL 183


Emopamil binding protein (EBP) is as a gene that encodes a non-glycosylated type I integral membrane protein of endoplasmic reticulum and shows high level expression in epithelial tissues. The EBP protein has emopamil binding domains, including the sterol acceptor site and the catalytic centre, which show Delta8-Delta7 sterol isomerase activity. Human sterol isomerase, a homologue of mouse EBP, is suggested not only to play a role in cholesterol biosynthesis, but also to affect lipoprotein internalisation. In humans, mutations of EBP are known to cause the genetic disorder of X-linked dominant chondrodysplasia punctata (CDPX2). This syndrome of humans is lethal in most males, and affected females display asymmetric hyperkeratotic skin and skeletal abnormalities. Length = 193

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 211
PF05241194 EBP: Emopamil binding protein ; InterPro: IPR00790 100.0
KOG4826229 consensus C-8,7 sterol isomerase [Lipid transport 100.0
PF10914150 DUF2781: Protein of unknown function (DUF2781); In 96.94
>PF05241 EBP: Emopamil binding protein ; InterPro: IPR007905 Emopamil binding protein (EBP) is a nonglycosylated type I integral membrane protein of endoplasmic reticulum and shows high level expression in epithelial tissues Back     alignment and domain information
Probab=100.00  E-value=4e-63  Score=419.35  Aligned_cols=187  Identities=38%  Similarity=0.733  Sum_probs=175.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhc-cCCCchhhHHHHHHHHhhhhhheeEeceeeeecccCCCCCChhHHHhhHhhhcccccc
Q 028272           19 HAWNGVSLLLIIFVTWIISGM-SQAKSKIERLLICWWALTGLIHVFQEGYYVFTPDLFNDNSPNFMAEIWKEYSKGDSRY   97 (211)
Q Consensus        19 l~~~~~~~~~i~~~~~~~~~~-~~~~~~~dr~~~~Wf~~~~~iH~~~EG~fv~~~~~~~~~~~~~~a~LWkeYa~~DsRY   97 (211)
                      ++.+++++++++++++.++++ +|+++++||++++||++||+||+++||+|++++.++++.++++++|+||||+|+|+||
T Consensus         2 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~W~~~~~~iH~~~eG~f~~~~~~~~~~~~~~~~~lWkeYa~~D~RY   81 (194)
T PF05241_consen    2 LAIFLAGCAAVLLIAYLLSRRLPPSLSKGDRFVFLWFALDGLIHFFLEGYFVYFRPFSPGTSQSLLAQLWKEYAKADSRY   81 (194)
T ss_pred             cHHHHHHHHHHHHHHHHHHhccCCCCchhhHHHHHHHHHHhhHHheEeeehheechhccccccchHHHHHHHHccCCccc
Confidence            567778888888888888866 6778999999999999999999999999999999998855569999999999999999


Q ss_pred             ccCCCcEEeeehhHHHhhhHHHHHHHHHHHhcCCchhHHHHHHHHHHHhcceeeeehhhhcC----CCCC-CCchhhhhh
Q 028272           98 ATRHTSVLGIESVASIVLGPLSLLAAYAVAKQKSYRYIFQFAISIAQLYGTIQYFLTAFLEG----DNFA-SSRYYYYSY  172 (211)
Q Consensus        98 ~~~D~~vv~~E~it~~~~GPl~l~~~~~i~~~~~~r~~lqivvs~~qLyG~vlyf~te~~~G----~~~~-~~~lyfW~y  172 (211)
                      +++|++++|+|++|+++|||+|+++++++.++|++||++|+++|++|+|||+|||+||+++|    .+++ +|++|||+|
T Consensus        82 ~~~D~~vv~~e~~t~l~~Gpl~l~~~~~i~~~~~~r~~l~i~vs~~qlygtvlyf~~e~~~g~~~~~~~~~~~~ly~W~y  161 (194)
T PF05241_consen   82 LTSDPFVVCMESITVLLEGPLCLLAAYLIAKRSPYRHFLQIVVSVMQLYGTVLYFATEWLEGFVHSPNFSTPEPLYFWFY  161 (194)
T ss_pred             ccCCCcEEeehhHHHHHHhHHHHHHHHHHHhCchHHHHHHHHHHHHhhheeeEEEEEHhhccCcCCccCCCCChhhheee
Confidence            99999999999999999999999999999999999999999999999999999999999999    4555 899999999


Q ss_pred             hhccCcchhhhhHHHHHHHHHHHHHHHHHhhhh
Q 028272          173 YVGQSSIWVIVPMLIATRYWIKIHAICKRLQDK  205 (211)
Q Consensus       173 fV~~N~iWivvP~~~l~~s~~~i~~a~~~~~~~  205 (211)
                      ||++|++|+++|++++++|+++|++|++.+|+|
T Consensus       162 ~v~~N~iWivvP~~~l~~s~~~i~~a~~~~~~~  194 (194)
T PF05241_consen  162 FVFPNGIWIVVPLLLLYQSWKEIARAFRAAQKK  194 (194)
T ss_pred             hhhcchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999999999999999999999999999998875



The EBP protein has emopamil binding domains, including the sterol acceptor site and the catalytic centre, which show Delta8-Delta7 sterol isomerase activity. Human sterol isomerase, a homologue of mouse EBP, is suggested not only to play a role in cholesterol biosynthesis, but also to affect lipoprotein internalisation. In humans, mutations of EBP are known to cause the genetic disorder of X-linked dominant chondrodysplasia punctata (CDPX2). This syndrome of humans is lethal in most males, and affected females display asymmetric hyperkeratotic skin and skeletal abnormalities [].; GO: 0047750 cholestenol delta-isomerase activity, 0016125 sterol metabolic process, 0005783 endoplasmic reticulum, 0016021 integral to membrane

>KOG4826 consensus C-8,7 sterol isomerase [Lipid transport and metabolism] Back     alignment and domain information
>PF10914 DUF2781: Protein of unknown function (DUF2781); InterPro: IPR016964 This group represents a predicted transmembrane protein 97 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00