Citrus Sinensis ID: 028297

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-
Protein Sequence
MDSEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFFCFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHcEEEEEccHHHHHHHHHHHHccccccccccccccEEccccccccHHHHHHHHHHHHHHHccccccEEEEcccccccccHHHHHHHcccEEEcccccccccccccEEEEEccccEEEEEEccccccccEEEEEEccccccHHHHHHHHHHHHcccEEEEEEEEEEccccccccccccEEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccHHcccHHHHHHccEEEEccccEEEHHHHHHHHHHHEEHHHHcEccccccccEEEEccHHHHccHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccEEEEEEEcccccccEEEEEEEccccEEEEEEEccccccccEEEEEEEEEcccHHHHHHHHHHHHcccEEEEEEEEEEccccHHHcccccEEEEEEEEEEEcc
Coil and Loop (DISEMBL)
MDSEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFFCFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEargfvfgpsialaigakfvplrkpnklpgevisEAYVLEYGTDrlemhvgaiepgerALVIDDLVATGGTLSAAVRLLERMGAEVVECACvvglpegqrrldgkplyilveprlsvny
Flexible Loop (DISEMBL)
MDSEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFFCFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVglpegqrrldgkplyilveprlsvny
Low Complexity Region (SEG)
MDSEETRGYRAFLKQSVWCLTSQYQVsfsffflffcfvfsswsffffQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY
Disordered region (IsUnstruct)
********YRAFLKQSVWCLTSQYQVSFSFFFLFFCFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVE*******
Disordered Region (DISOPRED)
******R**RAFLKQSVWCLTSQYQVSFSFFFLFFCFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLS***
Disordered Region (DISEMBL)
********YRAFLKQSVWCLTSQYQVSFSFFFLFFCFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY
Disordered Region (DISPRO)
*****TRGYRAFLKQSVWCLTSQYQVSFSFFFLFFCFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDSEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFFCFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLSVNY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	211	2.2.26 [Sep-21-2011]
P31166	243	Adenine phosphoribosyltra	no	no	0.715	0.621	0.732	7e-63
Q42563	192	Adenine phosphoribosyltra	no	no	0.744	0.817	0.748	3e-61
Q43199	181	Adenine phosphoribosyltra	N/A	no	0.739	0.861	0.677	2e-59
B7LLQ1	183	Adenine phosphoribosyltra	yes	no	0.725	0.836	0.516	1e-41
B5Z3X9	183	Adenine phosphoribosyltra	yes	no	0.725	0.836	0.516	1e-41
Q8XD48	183	Adenine phosphoribosyltra	N/A	no	0.725	0.836	0.516	1e-41
Q3Z4T0	183	Adenine phosphoribosyltra	yes	no	0.725	0.836	0.516	2e-41
Q32J49	183	Adenine phosphoribosyltra	yes	no	0.725	0.836	0.516	2e-41
Q325C7	183	Adenine phosphoribosyltra	yes	no	0.725	0.836	0.516	2e-41
B2U4S2	183	Adenine phosphoribosyltra	yes	no	0.725	0.836	0.516	2e-41

>sp|P31166|APT1_ARATH Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=APT1 PE=1 SV=2

 Score =  239 bits (611), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 112/153 (73%), Positives = 136/153 (88%), Gaps = 2/153 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GIMFQDITTLLLD +AFKDT+ +FVDRY+D GISVVAG+EARGF+FGP IALAIGAKFVP
Sbjct: 88  GIMFQDITTLLLDTEAFKDTIALFVDRYKDKGISVVAGVEARGFIFGPPIALAIGAKFVP 147

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           +RKP KLPG+VISE Y LEYGTD +EMHVGA+EPGERA++IDDL+ATGGTL+AA+RLLER
Sbjct: 148 MRKPKKLPGKVISEEYSLEYGTDTIEMHVGAVEPGERAIIIDDLIATGGTLAAAIRLLER 207

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVE 204
           +G ++VECACV+ LPE  G+ +L    L++LV+
Sbjct: 208 VGVKIVECACVIELPELKGKEKLGETSLFVLVK 240

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 7

>sp|Q42563|APT2_ARATH Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana GN=APT2 PE=2 SV=1

 Score =  234 bits (597), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 119/159 (74%), Positives = 132/159 (83%), Gaps = 2/159 (1%)

Query: 50  WWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGA 109
           +   GIMFQDITTLLLD  AFK  VDIFVDRY+ M IS+VAG+EARGF+FGP IALAIGA
Sbjct: 27  FPKTGIMFQDITTLLLDPVAFKHVVDIFVDRYKHMNISLVAGVEARGFIFGPPIALAIGA 86

Query: 110 KFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVR 169
           KFVPLRKP KLPG VISE Y LEYG D LEM V A++  ERAL+IDDLVATGGTLSA++ 
Sbjct: 87  KFVPLRKPGKLPGRVISEEYELEYGRDCLEMSVEAVKSEERALIIDDLVATGGTLSASIN 146

Query: 170 LLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVEPR 206
           LLER GAEVVECACVVGLP  +GQ +L GKPLY+LVEP 
Sbjct: 147 LLERAGAEVVECACVVGLPKFKGQCKLKGKPLYVLVEPN 185

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q43199|APT1_WHEAT Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1

 Score =  228 bits (581), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 107/158 (67%), Positives = 136/158 (86%), Gaps = 2/158 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GI+FQDITTLLLD +AF+DT D+FV+RY+D  I+VVAG+EARGF+FGP IALAIGAKFVP
Sbjct: 24  GILFQDITTLLLDPQAFRDTTDLFVERYKDKDITVVAGVEARGFIFGPPIALAIGAKFVP 83

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           +RKP KLPGEVISE Y LEYGTD++EMHVGA++P +R L++DDL+ATGGTL AA +L+ER
Sbjct: 84  IRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVQPNDRVLIVDDLIATGGTLCAAAKLIER 143

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRLSV 209
           +GA+VVECACV+ LPE  G+ +L   P+++LV+   SV
Sbjct: 144 VGAKVVECACVIELPELKGRDKLGDMPVFVLVQADESV 181

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Triticum aestivum (taxid: 4565)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|B7LLQ1|APT_ESCF3 Adenine phosphoribosyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=apt PE=3 SV=1

 Score =  169 bits (428), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 115/155 (74%), Gaps = 2/155 (1%)

Query: 43  SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPS 102
           S    Q +   GI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EARGF+FG  
Sbjct: 14  SIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAP 73

Query: 103 IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG 162
           +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+DDL+ATGG
Sbjct: 74  VALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGG 133

Query: 163 TLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 195
           T+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 134 TIEATVKLIRRLGGEVTDAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) (taxid: 585054)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|B5Z3X9|APT_ECO5E Adenine phosphoribosyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=apt PE=3 SV=1

 Score =  169 bits (428), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 115/155 (74%), Gaps = 2/155 (1%)

Query: 43  SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPS 102
           S    Q +   GI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EARGF+FG  
Sbjct: 14  SIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGINKVVGTEARGFLFGAP 73

Query: 103 IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG 162
           +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+DDL+ATGG
Sbjct: 74  VALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGG 133

Query: 163 TLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 195
           T+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 134 TIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Escherichia coli O157:H7 (strain EC4115 / EHEC) (taxid: 444450)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q8XD48|APT_ECO57 Adenine phosphoribosyltransferase OS=Escherichia coli O157:H7 GN=apt PE=3 SV=1

 Score =  169 bits (428), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 115/155 (74%), Gaps = 2/155 (1%)

Query: 43  SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPS 102
           S    Q +   GI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EARGF+FG  
Sbjct: 14  SIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGINKVVGTEARGFLFGAP 73

Query: 103 IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG 162
           +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+DDL+ATGG
Sbjct: 74  VALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGG 133

Query: 163 TLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 195
           T+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 134 TIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Escherichia coli O157:H7 (taxid: 83334)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q3Z4T0|APT_SHISS Adenine phosphoribosyltransferase OS=Shigella sonnei (strain Ss046) GN=apt PE=3 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 115/155 (74%), Gaps = 2/155 (1%)

Query: 43  SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPS 102
           S    Q +   GI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EARGF+FG  
Sbjct: 14  SIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAP 73

Query: 103 IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG 162
           +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+DDL+ATGG
Sbjct: 74  VALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGG 133

Query: 163 TLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 195
           T+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 134 TIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shigella sonnei (strain Ss046) (taxid: 300269)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q32J49|APT_SHIDS Adenine phosphoribosyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=apt PE=3 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 115/155 (74%), Gaps = 2/155 (1%)

Query: 43  SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPS 102
           S    Q +   GI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EARGF+FG  
Sbjct: 14  SIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAP 73

Query: 103 IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG 162
           +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+DDL+ATGG
Sbjct: 74  VALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGG 133

Query: 163 TLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 195
           T+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 134 TIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shigella dysenteriae serotype 1 (strain Sd197) (taxid: 300267)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|Q325C7|APT_SHIBS Adenine phosphoribosyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=apt PE=3 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 115/155 (74%), Gaps = 2/155 (1%)

Query: 43  SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPS 102
           S    Q +   GI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EARGF+FG  
Sbjct: 14  SIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAP 73

Query: 103 IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG 162
           +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+DDL+ATGG
Sbjct: 74  VALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGG 133

Query: 163 TLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 195
           T+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 134 TIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shigella boydii serotype 4 (strain Sb227) (taxid: 300268)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

>sp|B2U4S2|APT_SHIB3 Adenine phosphoribosyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=apt PE=3 SV=1

 Score =  169 bits (427), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 115/155 (74%), Gaps = 2/155 (1%)

Query: 43  SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPS 102
           S    Q +   GI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EARGF+FG  
Sbjct: 14  SIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAP 73

Query: 103 IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG 162
           +AL +G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+DDL+ATGG
Sbjct: 74  VALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGG 133

Query: 163 TLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 195
           T+ A V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 134 TIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLE 168

Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.

Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) (taxid: 344609)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	211
225442922	192	PREDICTED: adenine phosphoribosyltransfe	0.725	0.796	0.903	3e-75
297743475	186	unnamed protein product [Vitis vinifera]	0.725	0.822	0.903	4e-75
255548878	213	Adenine phosphoribosyltransferase, putat	0.744	0.737	0.867	3e-73
224141909	191	predicted protein [Populus trichocarpa]	0.725	0.801	0.890	5e-72
449441900	191	PREDICTED: adenine phosphoribosyltransfe	0.725	0.801	0.883	2e-70
224089276	191	predicted protein [Populus trichocarpa]	0.725	0.801	0.851	2e-70
255553231	186	Adenine phosphoribosyltransferase, putat	0.725	0.822	0.864	4e-70
225430318	191	PREDICTED: adenine phosphoribosyltransfe	0.791	0.874	0.798	9e-70
351721348	198	uncharacterized protein LOC100499904 [Gl	0.725	0.772	0.845	1e-68
15238973	191	adenine phosphoribosyltransferase 5 [Ara	0.720	0.795	0.818	1e-67

>gi|225442922|ref|XP_002265016.1| PREDICTED: adenine phosphoribosyltransferase 2-like [Vitis vinifera]

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 140/155 (90%), Positives = 150/155 (96%), Gaps = 2/155 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAG+EARGF+FGPSIALAIGAKFVP
Sbjct: 37  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGVEARGFMFGPSIALAIGAKFVP 96

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           LRKP KLPGEVISEAYVLEYGTDRLEMHVGA++PGERALVIDDL+ATGGTL AA++LLER
Sbjct: 97  LRKPKKLPGEVISEAYVLEYGTDRLEMHVGAVQPGERALVIDDLIATGGTLCAAIKLLER 156

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
           +GAEVVECACV+GLPE  GQ RL+GKPLYILVEPR
Sbjct: 157 VGAEVVECACVIGLPEAKGQCRLNGKPLYILVEPR 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743475|emb|CBI36342.3| unnamed protein product [Vitis vinifera]

 Score =  286 bits (731), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 140/155 (90%), Positives = 150/155 (96%), Gaps = 2/155 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAG+EARGF+FGPSIALAIGAKFVP
Sbjct: 31  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGVEARGFMFGPSIALAIGAKFVP 90

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           LRKP KLPGEVISEAYVLEYGTDRLEMHVGA++PGERALVIDDL+ATGGTL AA++LLER
Sbjct: 91  LRKPKKLPGEVISEAYVLEYGTDRLEMHVGAVQPGERALVIDDLIATGGTLCAAIKLLER 150

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
           +GAEVVECACV+GLPE  GQ RL+GKPLYILVEPR
Sbjct: 151 VGAEVVECACVIGLPEAKGQCRLNGKPLYILVEPR 185

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548878|ref|XP_002515495.1| Adenine phosphoribosyltransferase, putative [Ricinus communis] gi|223545439|gb|EEF46944.1| Adenine phosphoribosyltransferase, putative [Ricinus communis]

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 138/159 (86%), Positives = 149/159 (93%), Gaps = 2/159 (1%)

Query: 50  WWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGA 109
           +   GIMFQDITTLL DHKAFKD VDIFVDRYR+MGISVVAG+EARGF+FGPSIALAIGA
Sbjct: 27  FPKPGIMFQDITTLLPDHKAFKDAVDIFVDRYRNMGISVVAGVEARGFMFGPSIALAIGA 86

Query: 110 KFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVR 169
           KFVPLRKP KLPGEVISE YVLEYGTD LEMHVGA++PGERAL+IDDLVATGGTLSAA+R
Sbjct: 87  KFVPLRKPRKLPGEVISEKYVLEYGTDCLEMHVGAVQPGERALIIDDLVATGGTLSAAIR 146

Query: 170 LLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
           LLER+GAEVVECACV+GLPE  GQRRL+GKPLYILVEPR
Sbjct: 147 LLERVGAEVVECACVIGLPEVKGQRRLNGKPLYILVEPR 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141909|ref|XP_002324303.1| predicted protein [Populus trichocarpa] gi|222865737|gb|EEF02868.1| predicted protein [Populus trichocarpa]

 Score =  276 bits (705), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 138/155 (89%), Positives = 147/155 (94%), Gaps = 2/155 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAG+EARGF+FGP+IALAIGAKFVP
Sbjct: 31  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGVEARGFMFGPAIALAIGAKFVP 90

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           LRKP KLPGEVI+EAY LEYGTD LEMHVGA+EPGERA+VIDDLVATGGTLSAA+RLLER
Sbjct: 91  LRKPRKLPGEVIAEAYELEYGTDCLEMHVGAVEPGERAIVIDDLVATGGTLSAAIRLLER 150

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
           M AEVVECACV+GL E  GQ RL+GKPLYILVEPR
Sbjct: 151 MEAEVVECACVIGLREVKGQCRLNGKPLYILVEPR 185

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441900|ref|XP_004138720.1| PREDICTED: adenine phosphoribosyltransferase 2-like [Cucumis sativus] gi|449527059|ref|XP_004170530.1| PREDICTED: adenine phosphoribosyltransferase 2-like [Cucumis sativus]

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 137/155 (88%), Positives = 144/155 (92%), Gaps = 2/155 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GIMFQDITTLLLDHKAFKDTVDIFVDRYR M ISVVAG+EARGF+FGPSIAL+IGAKFVP
Sbjct: 31  GIMFQDITTLLLDHKAFKDTVDIFVDRYRGMNISVVAGVEARGFMFGPSIALSIGAKFVP 90

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           LRKP KLPGEVISEAY LEYGTD LEM + A++ GERALVIDDLVATGGTLSAA+RLLER
Sbjct: 91  LRKPRKLPGEVISEAYDLEYGTDCLEMQIDAVKTGERALVIDDLVATGGTLSAAIRLLER 150

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
           MGAEVVECACVVGL E  GQRRLDGKPLYILVEPR
Sbjct: 151 MGAEVVECACVVGLREVKGQRRLDGKPLYILVEPR 185

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089276|ref|XP_002308672.1| predicted protein [Populus trichocarpa] gi|222854648|gb|EEE92195.1| predicted protein [Populus trichocarpa]

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 132/155 (85%), Positives = 146/155 (94%), Gaps = 2/155 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GIMFQDITTLLLDHK FKDTVDIFVDRYRDM ISVVAG+EARGF+FGP+IALAIGAKFVP
Sbjct: 31  GIMFQDITTLLLDHKVFKDTVDIFVDRYRDMNISVVAGVEARGFMFGPAIALAIGAKFVP 90

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           LRKP KLPGEVISEAY LEYGTD LE+HVGA++PGERA+VIDDLVATGGTLSAA+ LLER
Sbjct: 91  LRKPRKLPGEVISEAYELEYGTDCLEIHVGAVQPGERAIVIDDLVATGGTLSAAISLLER 150

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
           +GAEV+ECACV+G+P+  GQ RL+GKPLYILVEPR
Sbjct: 151 VGAEVIECACVIGVPDIKGQCRLNGKPLYILVEPR 185

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553231|ref|XP_002517658.1| Adenine phosphoribosyltransferase, putative [Ricinus communis] gi|223543290|gb|EEF44822.1| Adenine phosphoribosyltransferase, putative [Ricinus communis]

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 134/155 (86%), Positives = 146/155 (94%), Gaps = 2/155 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GIMFQDITTLLLD KAFK TVDIFVDRYRDM ISVVAG+EARGF+FGPSIALAIGAKFVP
Sbjct: 31  GIMFQDITTLLLDPKAFKYTVDIFVDRYRDMDISVVAGVEARGFIFGPSIALAIGAKFVP 90

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           LRKP KLPGEVISEAYVLEYGTD LEMH+GA++ GERA++IDDLVATGGTLSAA+RLLER
Sbjct: 91  LRKPKKLPGEVISEAYVLEYGTDCLEMHIGAVKHGERAIIIDDLVATGGTLSAAIRLLER 150

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
           +GAEV+ECACV+GLPE  GQ RL+GKPLYILVEPR
Sbjct: 151 VGAEVIECACVIGLPEFKGQCRLNGKPLYILVEPR 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430318|ref|XP_002285191.1| PREDICTED: adenine phosphoribosyltransferase 2 [Vitis vinifera] gi|296082053|emb|CBI21058.3| unnamed protein product [Vitis vinifera]

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 135/169 (79%), Positives = 147/169 (86%), Gaps = 2/169 (1%)

Query: 41  SWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFG 100
           S +      +   GIMFQDITTLLLDHKAFK TV+IFVDRYRDM ISVVAG+EARGF+FG
Sbjct: 18  SEALRIVPHFPKPGIMFQDITTLLLDHKAFKGTVEIFVDRYRDMDISVVAGVEARGFLFG 77

Query: 101 PSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT 160
           PS+ALAIGAKFVPLRKP KLPGEVISE Y LEYGTDRLEMHVGA+ PGERALVIDD VAT
Sbjct: 78  PSVALAIGAKFVPLRKPKKLPGEVISEDYELEYGTDRLEMHVGAVHPGERALVIDDFVAT 137

Query: 161 GGTLSAAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILVEPRL 207
           GGTLSAA+RLL+R+GAEVVECACVVGLP  EGQ RL+G PLYILV P+L
Sbjct: 138 GGTLSAAIRLLKRVGAEVVECACVVGLPEVEGQSRLNGTPLYILVGPQL 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721348|ref|NP_001237718.1| uncharacterized protein LOC100499904 [Glycine max] gi|255627539|gb|ACU14114.1| unknown [Glycine max]

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 131/155 (84%), Positives = 142/155 (91%), Gaps = 2/155 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM ISVVAGIEARGF+FGPSIAL IGAKFVP
Sbjct: 31  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPSIALGIGAKFVP 90

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           LRKP KLPGEVISE Y LEYGTD LE+HVGA +PGERA++IDDLVATGGTLSA V+LLER
Sbjct: 91  LRKPRKLPGEVISEKYALEYGTDCLELHVGAAQPGERAIIIDDLVATGGTLSAGVKLLER 150

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
           +GAEVVECACV+G+P+  GQ R  GKPLY+LVEPR
Sbjct: 151 VGAEVVECACVIGVPDVKGQCRSIGKPLYVLVEPR 185

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238973|ref|NP_196677.1| adenine phosphoribosyltransferase 5 [Arabidopsis thaliana] gi|297807153|ref|XP_002871460.1| hypothetical protein ARALYDRAFT_487948 [Arabidopsis lyrata subsp. lyrata] gi|8953378|emb|CAB96651.1| adenine phosphoribosyltransferase-like protein [Arabidopsis thaliana] gi|28393271|gb|AAO42064.1| putative adenine phosphoribosyltransferase [Arabidopsis thaliana] gi|28827532|gb|AAO50610.1| putative adenine phosphoribosyltransferase [Arabidopsis thaliana] gi|297317297|gb|EFH47719.1| hypothetical protein ARALYDRAFT_487948 [Arabidopsis lyrata subsp. lyrata] gi|332004257|gb|AED91640.1| adenine phosphoribosyltransferase 5 [Arabidopsis thaliana]

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 126/154 (81%), Positives = 140/154 (90%), Gaps = 2/154 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GIMFQDITTLLLDHKAFK T+DIFVDRY+DM ISVVAG+EARGF+FGPSIALAIGAKF+P
Sbjct: 31  GIMFQDITTLLLDHKAFKHTIDIFVDRYKDMQISVVAGVEARGFLFGPSIALAIGAKFIP 90

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           LRKP KLPG+VISE+Y LEYG DRLEMHVGA+EP ER ++IDDLVATGGTLSAA+ LLE 
Sbjct: 91  LRKPGKLPGKVISESYELEYGHDRLEMHVGAVEPRERVIIIDDLVATGGTLSAAMSLLES 150

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEP 205
            GAEVVECACV+GLPE  GQ +L GKPLY+LVEP
Sbjct: 151 QGAEVVECACVIGLPEVKGQHKLKGKPLYVLVEP 184

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	211
TAIR|locus:2147967	191	APT5 "adenine phosphoribosyltr	0.720	0.795	0.818	3.7e-64
TAIR|locus:2135550	182	APT4 "adenine phosphoribosyl t	0.725	0.840	0.761	6.4e-60
TAIR|locus:2127480	183	APT3 "adenine phosphoribosyl t	0.725	0.836	0.774	6.4e-60
TAIR|locus:2016309	192	APT2 "adenine phosphoribosyl t	0.720	0.791	0.772	2.8e-57
UNIPROTKB|P69503	183	apt "adenine phosphoribosyltra	0.710	0.819	0.532	1.1e-39
UNIPROTKB|Q9KT52	181	apt "Adenine phosphoribosyltra	0.701	0.817	0.506	1.8e-39
TIGR_CMR|VC_1053	181	VC_1053 "adenine phosphoribosy	0.701	0.817	0.506	1.8e-39
TIGR_CMR|SO_2012	181	SO_2012 "adenine phosphoribosy	0.668	0.779	0.496	6.5e-35
TIGR_CMR|CPS_3745	181	CPS_3745 "adenine phosphoribos	0.668	0.779	0.482	2e-33
TIGR_CMR|SPO_3066	179	SPO_3066 "adenine phosphoribos	0.668	0.787	0.471	2.3e-32

TAIR|locus:2147967 APT5 "adenine phosphoribosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
 Identities = 126/154 (81%), Positives = 140/154 (90%)

Query:    54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
             GIMFQDITTLLLDHKAFK T+DIFVDRY+DM ISVVAG+EARGF+FGPSIALAIGAKF+P
Sbjct:    31 GIMFQDITTLLLDHKAFKHTIDIFVDRYKDMQISVVAGVEARGFLFGPSIALAIGAKFIP 90

Query:   114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
             LRKP KLPG+VISE+Y LEYG DRLEMHVGA+EP ER ++IDDLVATGGTLSAA+ LLE 
Sbjct:    91 LRKPGKLPGKVISESYELEYGHDRLEMHVGAVEPRERVIIIDDLVATGGTLSAAMSLLES 150

Query:   174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEP 205
              GAEVVECACV+GLPE  GQ +L GKPLY+LVEP
Sbjct:   151 QGAEVVECACVIGLPEVKGQHKLKGKPLYVLVEP 184

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA

GO:0009116 "nucleoside metabolic process" evidence=IEA

TAIR|locus:2135550 APT4 "adenine phosphoribosyl transferase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 118/155 (76%), Positives = 138/155 (89%)

Query:    54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
             GIMFQDITTLLLD KAFKDT+D+FV+RYRDM ISVVAGIEARGF+FG  IALAIGAKFVP
Sbjct:    28 GIMFQDITTLLLDPKAFKDTIDLFVERYRDMNISVVAGIEARGFIFGSPIALAIGAKFVP 87

Query:   114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
             LRKP KLPG++I E Y LEYG+DRLEMHV A++ G+RALV+DDL+ATGGTL AA+ LL+R
Sbjct:    88 LRKPKKLPGQIIFEEYELEYGSDRLEMHVEAVDSGDRALVVDDLIATGGTLCAAMNLLKR 147

Query:   174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
             +GAEV+ECACV+ LPE  G+ RL+GKPLY+LVE R
Sbjct:   148 VGAEVIECACVIELPELKGRERLEGKPLYVLVEYR 182

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA;ISS

GO:0009116 "nucleoside metabolic process" evidence=IEA

TAIR|locus:2127480 APT3 "adenine phosphoribosyl transferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 120/155 (77%), Positives = 136/155 (87%)

Query:    54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
             GIMFQDITT+LLD KAFKDT+D+FV+RYRD  ISVVAGIEARGF+FGP IALAIGAKFVP
Sbjct:    29 GIMFQDITTVLLDPKAFKDTIDLFVERYRDKNISVVAGIEARGFLFGPPIALAIGAKFVP 88

Query:   114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
             LRKP KLPGE I E Y LEYG DRLEMH+GA+E G+RALV+DDL+ATGGTL AA+ LLER
Sbjct:    89 LRKPKKLPGETIFEEYELEYGNDRLEMHIGAVEAGDRALVVDDLIATGGTLCAAINLLER 148

Query:   174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
             +GAEVVECACV+ LPE  G++RL GKPL +LVE R
Sbjct:   149 VGAEVVECACVIELPELKGRQRLKGKPLCMLVEYR 183

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA;TAS

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2016309 APT2 "adenine phosphoribosyl transferase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 119/154 (77%), Positives = 131/154 (85%)

Query:    54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
             GIMFQDITTLLLD  AFK  VDIFVDRY+ M IS+VAG+EARGF+FGP IALAIGAKFVP
Sbjct:    31 GIMFQDITTLLLDPVAFKHVVDIFVDRYKHMNISLVAGVEARGFIFGPPIALAIGAKFVP 90

Query:   114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
             LRKP KLPG VISE Y LEYG D LEM V A++  ERAL+IDDLVATGGTLSA++ LLER
Sbjct:    91 LRKPGKLPGRVISEEYELEYGRDCLEMSVEAVKSEERALIIDDLVATGGTLSASINLLER 150

Query:   174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEP 205
              GAEVVECACVVGLP+  GQ +L GKPLY+LVEP
Sbjct:   151 AGAEVVECACVVGLPKFKGQCKLKGKPLYVLVEP 184

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM;IEA

GO:0006168 "adenine salvage" evidence=IEA;TAS

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0005829 "cytosol" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS

UNIPROTKB|P69503 apt "adenine phosphoribosyltransferase" [Escherichia coli K-12 (taxid:83333)]

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 82/154 (53%), Positives = 116/154 (75%)

Query:    54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
             GI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EARGF+FG  +AL +G  FVP
Sbjct:    25 GILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVP 84

Query:   114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
             +RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+DDL+ATGGT+ A V+L+ R
Sbjct:    85 VRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRR 144

Query:   174 MGAEVVECACVVGLPE--GQRRLD--GKPLYILV 203
             +G EV + A ++ L +  G++RL+  G   Y LV
Sbjct:   145 LGGEVADAAFIINLFDLGGEQRLEKQGITSYSLV 178

GO:0009116 "nucleoside metabolic process" evidence=IEA

GO:0044209 "AMP salvage" evidence=IEA

GO:0042802 "identical protein binding" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006168 "adenine salvage" evidence=IEA;IDA

GO:0006166 "purine ribonucleoside salvage" evidence=IEA

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=IEA;IDA

UNIPROTKB|Q9KT52 apt "Adenine phosphoribosyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 76/150 (50%), Positives = 113/150 (75%)

Query:    54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
             GI+F+D+T+LL D +A++ T+ + V++Y+DMG + V G EARGF+FG  +AL +G  FVP
Sbjct:    23 GILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVP 82

Query:   114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
             +RKP KLP + ++++Y LEYGTD LE+HV AI+PG++ LV+DDL+ATGGT+ A  +L+ +
Sbjct:    83 VRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQ 142

Query:   174 MGAEVVECACVVGLPE--GQRRLDGKPLYI 201
             +G EV   A V+ LPE  G +RL+G  L +
Sbjct:   143 LGGEVEHAAFVINLPEIGGDKRLEGLGLQV 172

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|VC_1053 VC_1053 "adenine phosphoribosyltransferase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 76/150 (50%), Positives = 113/150 (75%)

Query:    54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
             GI+F+D+T+LL D +A++ T+ + V++Y+DMG + V G EARGF+FG  +AL +G  FVP
Sbjct:    23 GILFRDVTSLLEDAQAYQATIQLLVEKYKDMGFTKVVGTEARGFLFGAPLALELGVGFVP 82

Query:   114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
             +RKP KLP + ++++Y LEYGTD LE+HV AI+PG++ LV+DDL+ATGGT+ A  +L+ +
Sbjct:    83 VRKPGKLPRQTVAQSYELEYGTDTLEIHVDAIKPGDKVLVVDDLLATGGTIEATTKLIRQ 142

Query:   174 MGAEVVECACVVGLPE--GQRRLDGKPLYI 201
             +G EV   A V+ LPE  G +RL+G  L +
Sbjct:   143 LGGEVEHAAFVINLPEIGGDKRLEGLGLQV 172

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|SO_2012 SO_2012 "adenine phosphoribosyltransferase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 71/143 (49%), Positives = 102/143 (71%)

Query:    54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
             GI+F+D+T+LL +  A+K T+D+ V+ YR  G + + G EARGF+FG  +AL +G  FVP
Sbjct:    23 GILFRDVTSLLENATAYKATIDLLVEHYRSKGFTKIVGTEARGFLFGAPLALGLGIGFVP 82

Query:   114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
             +RKP KLP   IS++Y LEYG D LE+H  AI   ++ LV+DDL+ATGGT+ A V+L+ +
Sbjct:    83 VRKPGKLPRATISQSYELEYGHDSLEIHTDAITANDKVLVVDDLLATGGTIEATVKLIRQ 142

Query:   174 MGAEVVECACVVGLPE--GQRRL 194
             +G EV + A V+ LP+  G+ RL
Sbjct:   143 LGGEVQDAAFVISLPDLGGEARL 165

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|CPS_3745 CPS_3745 "adenine phosphoribosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 69/143 (48%), Positives = 100/143 (69%)

Query:    54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
             GIMF+D+T+LL D +AFK  +++  ++Y+  G + + G EARGF+FG  +ALA+   F+P
Sbjct:    23 GIMFRDVTSLLEDAEAFKLVMELLENKYKGRGFTKIVGTEARGFLFGAPLALALNIGFIP 82

Query:   114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
             +RKP KLP    S+AY LEYG D LE+H  A+ P +  L+IDDL+ATGGT+ A  +L+ R
Sbjct:    83 VRKPGKLPRPTYSQAYQLEYGEDILEIHQDALTPEDNVLIIDDLLATGGTIEATTKLIRR 142

Query:   174 MGAEVVECACVVGLPE--GQRRL 194
             +GA+V E   V+ LP+  G+ RL
Sbjct:   143 LGAQVQEAGFVISLPDLGGEERL 165

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

TIGR_CMR|SPO_3066 SPO_3066 "adenine phosphoribosyltransferase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 67/142 (47%), Positives = 98/142 (69%)

Query:    54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
             GI+F+D+TTL  D + F+  +D  +  Y    I  V G+EARGF+ G +IA  +   FVP
Sbjct:    21 GILFRDVTTLFADPRGFRIAIDQMLHPYAGERIDKVVGLEARGFILGGAIAHQLSVGFVP 80

Query:   114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
             +RK  KLPG  IS+ Y LEYG   +E+H  AI+PGE+ L++DDL+ATGGT +A ++L+ER
Sbjct:    81 IRKKGKLPGTTISQDYKLEYGEAIVEIHDDAIQPGEKILLVDDLLATGGTAAAGIKLVER 140

Query:   174 MGAEVVECACVVGLPE-GQRRL 194
             +G E+V CA ++ LP+ G R++
Sbjct:   141 LGGEIVSCAFIIDLPDLGGRKV 162

GO:0003999 "adenine phosphoribosyltransferase activity" evidence=ISS

GO:0006166 "purine ribonucleoside salvage" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A7MJV7	APT_CROS8	2, ., 4, ., 2, ., 7	0.5096	0.7251	0.8360	yes	no
A7FL92	APT_YERP3	2, ., 4, ., 2, ., 7	0.5170	0.6872	0.7754	yes	no
B7MQI4	APT_ECO81	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
A4TPB0	APT_YERPP	2, ., 4, ., 2, ., 7	0.5170	0.6872	0.7754	yes	no
Q66DQ2	APT_YERPS	2, ., 4, ., 2, ., 7	0.5170	0.6872	0.7754	yes	no
Q325C7	APT_SHIBS	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
Q1C4P3	APT_YERPA	2, ., 4, ., 2, ., 7	0.5170	0.6872	0.7754	yes	no
Q1CL33	APT_YERPN	2, ., 4, ., 2, ., 7	0.5170	0.6872	0.7754	yes	no
A3QF54	APT_SHELP	2, ., 4, ., 2, ., 7	0.5306	0.6872	0.8011	yes	no
A4W7F3	APT_ENT38	2, ., 4, ., 2, ., 7	0.5032	0.7251	0.8360	yes	no
Q0TKH2	APT_ECOL5	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B6I0C1	APT_ECOSE	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
A6T5N2	APT_KLEP7	2, ., 4, ., 2, ., 7	0.5202	0.6919	0.7978	yes	no
A1A8D5	APT_ECOK1	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B2U4S2	APT_SHIB3	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B1JHN6	APT_YERPY	2, ., 4, ., 2, ., 7	0.5170	0.6872	0.7754	yes	no
P69504	APT_ECOL6	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B1IZC5	APT_ECOLC	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
Q83M42	APT_SHIFL	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B7NIG1	APT_ECO7I	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
Q8ZC94	APT_YERPE	2, ., 4, ., 2, ., 7	0.5170	0.6872	0.7754	yes	no
B7LLQ1	APT_ESCF3	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B7UKE9	APT_ECO27	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
Q3Z4T0	APT_SHISS	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
C4ZUS3	APT_ECOBW	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B7N922	APT_ECOLU	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B5Z3X9	APT_ECO5E	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
Q32J49	APT_SHIDS	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B5Y0N8	APT_KLEP3	2, ., 4, ., 2, ., 7	0.5202	0.6919	0.7978	yes	no
A7ZXC7	APT_ECOHS	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B7L794	APT_ECO55	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B1LJM6	APT_ECOSM	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B7M3W1	APT_ECO8A	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
A1S560	APT_SHEAM	2, ., 4, ., 2, ., 7	0.5194	0.7203	0.8397	yes	no
B1XFQ6	APT_ECODH	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B7MDZ1	APT_ECO45	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
Q1RF67	APT_ECOUT	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
A9R0Q1	APT_YERPG	2, ., 4, ., 2, ., 7	0.5170	0.6872	0.7754	yes	no
A7ZIM8	APT_ECO24	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no
B2K6Z1	APT_YERPB	2, ., 4, ., 2, ., 7	0.5170	0.6872	0.7754	yes	no
Q0T7B5	APT_SHIF8	2, ., 4, ., 2, ., 7	0.5161	0.7251	0.8360	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.2	0.963
4th Layer	2.4.2.7	0.946

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	211
PLN02293	187	PLN02293, PLN02293, adenine phosphoribosyltransfer	1e-110
PRK02304	175	PRK02304, PRK02304, adenine phosphoribosyltransfer	2e-77
TIGR01090	169	TIGR01090, apt, adenine phosphoribosyltransferase	2e-63
COG0503	179	COG0503, Apt, Adenine/guanine phosphoribosyltransf	2e-55
cd06223	130	cd06223, PRTases_typeI, Phosphoribosyl transferase	3e-28
PRK12560	187	PRK12560, PRK12560, adenine phosphoribosyltransfer	8e-27
pfam00156	123	pfam00156, Pribosyltran, Phosphoribosyl transferas	4e-24
PRK00455	202	PRK00455, pyrE, orotate phosphoribosyltransferase;	2e-09
COG0461	201	COG0461, PyrE, Orotate phosphoribosyltransferase [	3e-09
PRK09213	271	PRK09213, PRK09213, pur operon repressor; Provisio	3e-07
TIGR01367	187	TIGR01367, pyrE_Therm, orotate phosphoribosyltrans	3e-07
TIGR01743	268	TIGR01743, purR_Bsub, pur operon repressor, Bacill	4e-07
PRK13810	187	PRK13810, PRK13810, orotate phosphoribosyltransfer	5e-07
PRK06031	233	PRK06031, PRK06031, phosphoribosyltransferase; Pro	6e-07
PRK09219	189	PRK09219, PRK09219, xanthine phosphoribosyltransfe	9e-07
PRK00129	209	PRK00129, upp, uracil phosphoribosyltransferase; R	1e-06
PRK07322	178	PRK07322, PRK07322, adenine phosphoribosyltransfer	1e-06
TIGR01251	308	TIGR01251, ribP_PPkin, ribose-phosphate pyrophosph	1e-06
COG0462	314	COG0462, PrsA, Phosphoribosylpyrophosphate synthet	2e-06
PRK08558	238	PRK08558, PRK08558, adenine phosphoribosyltransfer	3e-06
PRK00934	285	PRK00934, PRK00934, ribose-phosphate pyrophosphoki	6e-06
TIGR00336	173	TIGR00336, pyrE, orotate phosphoribosyltransferase	1e-05
COG0035	210	COG0035, Upp, Uracil phosphoribosyltransferase [Nu	7e-05
PRK02277	200	PRK02277, PRK02277, orotate phosphoribosyltransfer	1e-04
TIGR01091	207	TIGR01091, upp, uracil phosphoribosyltransferase	1e-04
TIGR01744	191	TIGR01744, XPRTase, xanthine phosphoribosyltransfe	1e-04
PRK13812	176	PRK13812, PRK13812, orotate phosphoribosyltransfer	2e-04
COG1040	225	COG1040, ComFC, Predicted amidophosphoribosyltrans	3e-04
PRK02812	330	PRK02812, PRK02812, ribose-phosphate pyrophosphoki	4e-04
PRK06827	382	PRK06827, PRK06827, phosphoribosylpyrophosphate sy	6e-04
COG0856	203	COG0856, COG0856, Orotate phosphoribosyltransferas	6e-04
PRK07199	301	PRK07199, PRK07199, phosphoribosylpyrophosphate sy	8e-04
PRK03092	304	PRK03092, PRK03092, ribose-phosphate pyrophosphoki	0.001
PLN02541	244	PLN02541, PLN02541, uracil phosphoribosyltransfera	0.002
PLN02369	302	PLN02369, PLN02369, ribose-phosphate pyrophosphoki	0.004

>gnl|CDD|177930 PLN02293, PLN02293, adenine phosphoribosyltransferase

 Score =  312 bits (802), Expect = e-110
 Identities = 129/155 (83%), Positives = 142/155 (91%), Gaps = 2/155 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GIMFQDITTLLLD KAFKDT+D+FV+RYRDMGISVVAGIEARGF+FGP IALAIGAKFVP
Sbjct: 31  GIMFQDITTLLLDPKAFKDTIDLFVERYRDMGISVVAGIEARGFIFGPPIALAIGAKFVP 90

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           LRKP KLPGEVISE YVLEYGTD LEMHVGA+EPGERALVIDDL+ATGGTL AA+ LLER
Sbjct: 91  LRKPGKLPGEVISEEYVLEYGTDCLEMHVGAVEPGERALVIDDLIATGGTLCAAINLLER 150

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR 206
            GAEVVECACV+ LPE  G+ +L+GKPL++LVE R
Sbjct: 151 AGAEVVECACVIELPELKGREKLNGKPLFVLVESR 185

Length = 187

>gnl|CDD|235028 PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional

 Score =  229 bits (588), Expect = 2e-77
 Identities = 87/153 (56%), Positives = 118/153 (77%), Gaps = 2/153 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GI+F+DIT LL D +AF++ +D  V+RY+D  I  + GIEARGF+FG ++A  +G  FVP
Sbjct: 20  GILFRDITPLLADPEAFREVIDALVERYKDADIDKIVGIEARGFIFGAALAYKLGIGFVP 79

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           +RKP KLP E ISE+Y LEYGTD LE+H  AI+PG+R L++DDL+ATGGTL AA++LLER
Sbjct: 80  VRKPGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGTLEAAIKLLER 139

Query: 174 MGAEVVECACVVGLPE--GQRRLDGKPLYILVE 204
           +GAEVV  A V+ LP+  G+ +L+G P+  LV+
Sbjct: 140 LGAEVVGAAFVIELPDLGGREKLEGYPVKSLVK 172

Length = 175

>gnl|CDD|233267 TIGR01090, apt, adenine phosphoribosyltransferase

 Score =  194 bits (494), Expect = 2e-63
 Identities = 75/154 (48%), Positives = 110/154 (71%), Gaps = 3/154 (1%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GI+F+DIT LL + + F+  +D+ V+RY+D  I  + G EARGF+FG ++A  +G  FVP
Sbjct: 15  GILFRDITPLLNNPELFRFLIDLLVERYKDANIDYIVGPEARGFIFGAALAYKLGVGFVP 74

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           +RKP KLPGE IS +Y LEYG D+LE+H  AI+PG+R L++DDL+ATGGT  A   L+ +
Sbjct: 75  VRKPGKLPGETISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATGGTAEATDELIRK 134

Query: 174 MGAEVVECACVVGLPE--GQRRLDGK-PLYILVE 204
           +G EVVE A ++ L +  G+ +L+   P++ L+E
Sbjct: 135 LGGEVVEAAFLIELKDLNGRAKLEPNVPVFSLLE 168

A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for This model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage. The trusted cutoff score is made high for this reason. Most proteins scoring between the trusted and noise cutoffs are likely to act as adenine phosphotransferase [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides]. Length = 169

>gnl|CDD|223577 COG0503, Apt, Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]

 Score =  173 bits (441), Expect = 2e-55
 Identities = 69/152 (45%), Positives = 94/152 (61%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GI+F DIT LL D +     +D   +RY+D GI  +  IEARG     ++AL +G  FVP
Sbjct: 22  GILFVDITLLLGDPELLAKLIDELAERYKDDGIDKIVTIEARGIPLAAAVALELGVPFVP 81

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           +RK  KLP E + E Y LEYG++ LE+H  A++PG+R L++DDL+ATGGT  A + LLE+
Sbjct: 82  VRKKGKLPEESVVETYYLEYGSETLELHKDALKPGDRVLIVDDLLATGGTALALIELLEQ 141

Query: 174 MGAEVVECACVVGLPEGQRRLDGKPLYILVEP 205
            GAEVV  A V+ L E   R   +   + V  
Sbjct: 142 AGAEVVGAAFVIELGELDGRKKLEDDGLPVFS 173

Length = 179

>gnl|CDD|206754 cd06223, PRTases_typeI, Phosphoribosyl transferase (PRT)-type I domain

 Score =  102 bits (257), Expect = 3e-28
 Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 74  VDIFVDRYRDMG--ISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVL 131
             +  +  R+      VV GI   G     ++A A+G     +RK  K PG   SE Y L
Sbjct: 2   GRLLAEEIREDLLEPDVVVGILRGGLPLAAALARALGLPLAFIRKERKGPGRTPSEPYGL 61

Query: 132 EYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 191
           E       + +G    G+R L++DD++ATGGTL AA+ LL+  GA+VV  A ++  PEG 
Sbjct: 62  E-------LPLGGDVKGKRVLLVDDVIATGGTLLAAIELLKEAGAKVVGVAVLLDKPEGG 114

Query: 192 RRLDGKPLYILV 203
            R    P   + 
Sbjct: 115 ARELASPGDPVY 126

Phosphoribosyl transferase (PRT) domain. The type I PRTases are identified by a conserved PRPP binding motif which features two adjacent acidic residues surrounded by one or more hydrophobic residue. PRTases catalyze the displacement of the alpha-1'-pyrophosphate of 5-phosphoribosyl-alpha1-pyrpphosphate (PRPP) by a nitrogen-containing nucleophile. The reaction products are an alpha-1 substituted ribose-5'-phosphate and a free pyrophosphate (PP). PRPP, an activated form of ribose-5-phosphate, is a key metabolite connecting nucleotide synthesis and salvage pathways. The type I PRTase family includes a range of diverse phosphoribosyl transferase enzymes and regulatory proteins of the nucleotide synthesis and salvage pathways, including adenine phosphoribosyltransferase EC:2.4.2.7., hypoxanthine-guanine-xanthine phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase EC:2.4.2.8., ribose-phosphate pyrophosphokinase EC:2.7.6.1., amidophosphoribosyltransferase EC:2.4.2.14., orotate phosphoribosyltransferase EC:2.4.2.10., uracil phosphoribosyltransferase EC:2.4.2.9., and xanthine-guanine phosphoribosyltransferase EC:2.4.2.22. Length = 130

>gnl|CDD|183595 PRK12560, PRK12560, adenine phosphoribosyltransferase; Provisional

 Score =  101 bits (252), Expect = 8e-27
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 16/144 (11%)

Query: 57  FQDITTLL----LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFV 112
           F D    L    L   A +      + +Y D  I  +   E +G      ++L +     
Sbjct: 25  FTDQLPALRPKVLKETAKE------IIKYIDKDIDKIVTEEDKGAPLATPVSL-LS--GK 75

Query: 113 PLRKPNKLPGEVISEAY-VLEYGTDRLE--MHVGAIEPGERALVIDDLVATGGTLSAAVR 169
           PL      P  +    Y V+E G++  E  +++  IE G+R  +IDD ++TGGT+ A ++
Sbjct: 76  PLAMARWYPYSLSELNYNVVEIGSEYFEGVVYLNGIEKGDRVAIIDDTLSTGGTVIALIK 135

Query: 170 LLERMGAEVVECACVVGLPEGQRR 193
            +E  G  V +  CV+   +   R
Sbjct: 136 AIENSGGIVSDVICVIEKTQNNGR 159

Length = 187

>gnl|CDD|215757 pfam00156, Pribosyltran, Phosphoribosyl transferase domain

 Score = 92.0 bits (229), Expect = 4e-24
 Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 6/127 (4%)

Query: 61  TTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIALAIGAKFVPLRKPN 118
           + LLLD +  ++ ++   ++ R+ GI   V+ GI   G     ++A  +G   V +RK  
Sbjct: 1   SNLLLDPEELRELIEALAEKIREEGIDPDVIVGIARGGIPLATALARELGIPLVLVRKSR 60

Query: 119 KLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEV 178
             P  + S        +  L   +  +  G+R L++DD++ TGGTL AAV LL++ GA+V
Sbjct: 61  SYPSSIKSR----GGESVTLLSRLPELLKGKRVLIVDDVLDTGGTLRAAVELLKKAGAKV 116

Query: 179 VECACVV 185
           V  A +V
Sbjct: 117 VGVAVLV 123

This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyltransferase EC:2.4.2.7. Hypoxanthine-guanine-xanthine phosphoribosyltransferase. Hypoxanthine phosphoribosyltransferase EC:2.4.2.8. Ribose-phosphate pyrophosphokinase i EC:2.7.6.1. Amidophosphoribosyltransferase EC:2.4.2.14. Orotate phosphoribosyltransferase EC:2.4.2.10. Uracil phosphoribosyltransferase EC:2.4.2.9. Xanthine-guanine phosphoribosyltransferase EC:2.4.2.22. In Arabidopsis, At the very N-terminus of this domain is the P-Loop NTPase domain. Length = 123

>gnl|CDD|234771 PRK00455, pyrE, orotate phosphoribosyltransferase; Validated

 Score = 55.2 bits (134), Expect = 2e-09
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 24/162 (14%)

Query: 51  WAAGIM---FQDITTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIAL 105
            ++G     + D   LL   +A         +  +D GI   VVAG    G     ++A 
Sbjct: 25  LSSGRKSPYYFDCRKLLSYPEALALLGRFLAEAIKDSGIEFDVVAGPATGGIPLAAAVAR 84

Query: 106 AIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLS 165
           A+    + +RK  K            ++G     +  G    G+R LV++D++ TGG++ 
Sbjct: 85  ALDLPAIFVRKEAK------------DHGEGGQ-I-EGRRLFGKRVLVVEDVITTGGSVL 130

Query: 166 AAVRLLERMGAEVVECACVV----GLPEGQRRLDGKPLYILV 203
            AV  +   GAEVV  A +V       E      G PL  L+
Sbjct: 131 EAVEAIRAAGAEVVGVAVIVDRQSAAQEVFADA-GVPLISLI 171

Length = 202

>gnl|CDD|223537 COG0461, PyrE, Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]

 Score = 54.2 bits (131), Expect = 3e-09
 Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 20/141 (14%)

Query: 51  WAAGI---MFQDITTLLLDHKAFKDTVDIFVDRYRDMG-ISVVAGIEARGFVFGPSIA-- 104
            ++G     + D+   L   +  +       +  ++     VVAG    G     + A  
Sbjct: 23  LSSGRKSPYYVDLRLFLTGPELLQLIAFALAEIIKEALEFDVVAGPALGGIPLAAATALA 82

Query: 105 LAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL 164
           LA       +RK  K            ++GT  L    G    GE+ +V++D++ TGG++
Sbjct: 83  LAHLPPMAYVRKEAK------------DHGTGGLI--EGGEVKGEKVVVVEDVITTGGSI 128

Query: 165 SAAVRLLERMGAEVVECACVV 185
             AV  L   GAEVV  A +V
Sbjct: 129 LEAVEALREAGAEVVGVAVIV 149

Length = 201

>gnl|CDD|236414 PRK09213, PRK09213, pur operon repressor; Provisional

 Score = 49.0 bits (118), Expect = 3e-07
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 76  IFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP-GEVISEAYVLEYG 134
           I    + D  I  V  +E +G     ++A  +   FV +R+ +K+  G  +S  YV   G
Sbjct: 121 IIASAFADKKIDAVMTVETKGIPLAYAVANYLNVPFVIVRRDSKVTEGSTVSINYV--SG 178

Query: 135 -TDRLE-MHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 179
            + R+E M +   +++ G R L++DD +  GGT++  + LL+   AEVV
Sbjct: 179 SSKRIETMSLSKRSLKEGSRVLIVDDFMKAGGTINGMISLLKEFDAEVV 227

Length = 271

>gnl|CDD|233377 TIGR01367, pyrE_Therm, orotate phosphoribosyltransferase, Thermus family

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 24/61 (39%), Positives = 39/61 (63%)

Query: 144 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILV 203
           A++PGE+ + ++D+V TGG+L  A+R +E  G +VV  AC++   +G +   G PL  L 
Sbjct: 101 AVKPGEKFVAVEDVVTTGGSLLEAIRAIEGQGGQVVGLACIIDRSQGGKPDSGVPLMSLK 160

Query: 204 E 204
           E
Sbjct: 161 E 161

This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]. Length = 187

>gnl|CDD|130804 TIGR01743, purR_Bsub, pur operon repressor, Bacillus subtilis type

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 9/136 (6%)

Query: 76  IFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP-GEVISEAYVLEYG 134
           I    + +  I  V  +  +G     ++A  +    V +RK +K+  G  +S  YV   G
Sbjct: 119 ILASVFAEREIDAVMTVATKGIPLAYAVASVLNVPLVIVRKDSKVTEGSTVSINYV--SG 176

Query: 135 T-DRLE-MHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG 190
           + +R++ M +   +++ G + L+IDD +  GGT++  + LL+   AEV     ++     
Sbjct: 177 SSNRIQTMSLAKRSLKTGSKVLIIDDFMKAGGTINGMINLLDEFDAEVAGIGVLIDNEGV 236

Query: 191 QRRL--DGKPLYILVE 204
             +L  D   L  L  
Sbjct: 237 DEKLVDDYMSLLTLSN 252

This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis, Regulatory functions, DNA interactions]. Length = 268

>gnl|CDD|184341 PRK13810, PRK13810, orotate phosphoribosyltransferase; Provisional

 Score = 47.9 bits (114), Expect = 5e-07
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 16/112 (14%)

Query: 80  RYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGT-DRL 138
           R ++M +  VAG+E  G     +++L  G   + +RK  K            +YGT  R 
Sbjct: 68  RIKEMDVDTVAGVELGGVPLATAVSLETGLPLLIVRKSVK------------DYGTGSRF 115

Query: 139 EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG 190
              VG ++P +R ++++D+  +GG++  A+ ++   GA +     VV   EG
Sbjct: 116 ---VGDLKPEDRIVMLEDVTTSGGSVREAIEVVREAGAYIKYVITVVDREEG 164

Length = 187

>gnl|CDD|235678 PRK06031, PRK06031, phosphoribosyltransferase; Provisional

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 33/132 (25%)

Query: 80  RYRDMGISVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL 138
           + R     VVAG+   G     ++A  +G  ++VPL    K             +  D L
Sbjct: 79  KARAFDPDVVAGLPTLGLTLAAAVARKLGHTRYVPLGTSRKF------------WYRDEL 126

Query: 139 EMHVGAI-----------EP-------GERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180
            + + +I           +P       G R  +IDD++++G ++ A +RLL   G E   
Sbjct: 127 SVPLSSITTPDQGKRLYIDPRMLPLLEGRRVALIDDVISSGASIVAGLRLLAACGIEPA- 185

Query: 181 CACVVGLPEGQR 192
                 + + +R
Sbjct: 186 -GIGAAMLQSER 196

Length = 233

>gnl|CDD|181705 PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated

 Score = 47.1 bits (113), Expect = 9e-07
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 20/121 (16%)

Query: 77  FVDRYRDMGISVVAGIEARGFVFGPSIALAI--GAKF-VPL-----RKPNKLPGEVISEA 128
           F  R++D GI+ +  IEA G      IA A+       VP+     +K   L  +V + A
Sbjct: 42  FARRFKDEGITKILTIEASG------IAPAVMAALALGVPVVFAKKKKSLTLTDDVYT-A 94

Query: 129 YVLEYGTDRLEMHVGA----IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV 184
            V  + T ++   V      +  G+R L+IDD +A G      + ++E+ GA+V     V
Sbjct: 95  TVYSF-TKQVTSTVSVSKKFLSEGDRVLIIDDFLANGQAALGLIDIIEQAGAKVAGIGIV 153

Query: 185 V 185
           +
Sbjct: 154 I 154

Length = 189

>gnl|CDD|234653 PRK00129, upp, uracil phosphoribosyltransferase; Reviewed

 Score = 47.0 bits (113), Expect = 1e-06
 Identities = 18/45 (40%), Positives = 31/45 (68%)

Query: 150 RALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL 194
             +V+D ++ATGG+  AA+ LL++ GA+ ++  C+V  PEG + L
Sbjct: 126 TVIVVDPMLATGGSAIAAIDLLKKRGAKNIKVLCLVAAPEGIKAL 170

Length = 209

>gnl|CDD|180928 PRK07322, PRK07322, adenine phosphoribosyltransferase; Provisional

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 21/111 (18%)

Query: 93  EARGFVFGPSIALAIGAKFVPLRKPNK------LPGEVIS------EAYVLEYGTDRLEM 140
           E +G     +++  +G  +V  RK  K      +  EV+S      +  VL+ G D    
Sbjct: 60  ETKGIPLAHALSRRLGKPYVVARKSRKPYMQDPIIQEVVSITTGKPQLLVLD-GAD---- 114

Query: 141 HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 191
               ++ G+R  ++DD+V+TGGTL+A  RL+ER G +VV  A      EG 
Sbjct: 115 -AEKLK-GKRVAIVDDVVSTGGTLTALERLVERAGGQVV--AKAAIFAEGD 161

Length = 178

>gnl|CDD|130318 TIGR01251, ribP_PPkin, ribose-phosphate pyrophosphokinase

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 14/40 (35%), Positives = 26/40 (65%)

Query: 148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 187
           G+  +++DD++ TGGT++ A  +L+  GA+ V  A   G+
Sbjct: 210 GKDVVIVDDIIDTGGTIAKAAEILKSAGAKRVIAAATHGV 249

Alternate name: phosphoribosylpyrophosphate synthetase In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason [Purines, pyrimidines, nucleosides, and nucleotides, Purine ribonucleotide biosynthesis]. Length = 308

>gnl|CDD|223538 COG0462, PrsA, Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 14/40 (35%), Positives = 26/40 (65%)

Query: 148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 187
           G+  +++DD++ TGGT++ A + L+  GA+ V  A   G+
Sbjct: 214 GKDVVIVDDIIDTGGTIAKAAKALKERGAKKVYAAATHGV 253

Length = 314

>gnl|CDD|181466 PRK08558, PRK08558, adenine phosphoribosyltransferase; Provisional

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 79  DRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG-EVISEAYV-LEYGTD 136
           +R+  + + VV      G     +IA   GA  V  +K +K  G E   E Y  L  G +
Sbjct: 105 ERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAKK-SKETGVEKFYEEYQRLASGIE 163

Query: 137 R-LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 179
             L +   A++ G+R L++DD++ +G T  A + L  + GA+VV
Sbjct: 164 VTLYLPASALKKGDRVLIVDDIIRSGETQRALLDLARQAGADVV 207

Length = 238

>gnl|CDD|234868 PRK00934, PRK00934, ribose-phosphate pyrophosphokinase; Provisional

 Score = 45.3 bits (108), Expect = 6e-06
 Identities = 16/40 (40%), Positives = 30/40 (75%)

Query: 148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 187
           G+  L++DD+++TGGT++ A+++L+  GA+ V  ACV  +
Sbjct: 204 GKDVLIVDDIISTGGTMATAIKILKEQGAKKVYVACVHPV 243

Length = 285

>gnl|CDD|129436 TIGR00336, pyrE, orotate phosphoribosyltransferase

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 15/117 (12%)

Query: 98  VFGPS-----IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERAL 152
           + GP+     IA A+  K   L KP        +     ++G        G +  G++ +
Sbjct: 58  IAGPALGGIPIATAVSVK---LAKPGGDIPLCFNRKEAKDHGEGGNI--EGELLEGDKVV 112

Query: 153 VIDDLVATGGTLSAAVRLLERMGAEVVECACVV--GLPEGQR---RLDGKPLYILVE 204
           V++D++ TG ++  AV +++  G +V      V        +   +  G P+  L+ 
Sbjct: 113 VVEDVITTGTSILEAVEIIQAAGGQVAGVIIAVDRQERSAGQEFEKEYGLPVISLIT 169

Orotate phosphoribosyltransferase (OPRTase) is involved in the biosynthesis of pyrimidine nucleotides. Alpha-D-ribosyldiphosphate 5-phosphate (PRPP) and orotate are utilized to form pyrophosphate and orotidine 5'-monophosphate (OMP) in the presence of divalent cations, preferably Mg2+. In a number of eukaryotes, this protein is fused to a domain that catalyses the reaction (EC 4.1.1.23). The combined activity of EC 2.4.2.10 and EC 4.1.1.23 is termed uridine 5'-monophosphate synthase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]. Length = 173

>gnl|CDD|223113 COG0035, Upp, Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 145 IEPGERALVIDDLVATGGTLSAAVRLL-ERMGAEVVECACVVGLPEGQRRL 194
                  +V+D ++ATGG+  AA+ LL +R G + ++   +V  PEG + +
Sbjct: 121 DIDERTVIVLDPMLATGGSAIAAIDLLKKRGGPKNIKVVSLVAAPEGIKAV 171

Length = 210

>gnl|CDD|235023 PRK02277, PRK02277, orotate phosphoribosyltransferase-like protein; Provisional

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 11/61 (18%)

Query: 148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV-----GLPEGQRRLDGKPLYIL 202
           G+R +++DD++ +G T+   +  L+  G + V  A VV     G+ E    +DG P+Y L
Sbjct: 140 GKRCVIVDDVITSGTTMKETIEYLKEHGGKPV--AVVVLIDKSGIDE----IDGVPVYSL 193

Query: 203 V 203
           +
Sbjct: 194 I 194

Length = 200

>gnl|CDD|130163 TIGR01091, upp, uracil phosphoribosyltransferase

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 17/48 (35%), Positives = 30/48 (62%)

Query: 147 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL 194
                +V+D ++ATGGT+ AA+ LL++ GA+ ++   +V  PEG   +
Sbjct: 121 DERTVIVLDPMLATGGTMIAALDLLKKRGAKKIKVLSIVAAPEGIEAV 168

A fairly deep split in phylogenetic and UPGMA trees separates this mostly prokaryotic set of uracil phosphoribosyltransferases from a mostly eukaryotic set that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides]. Length = 207

>gnl|CDD|130805 TIGR01744, XPRTase, xanthine phosphoribosyltransferase

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 16/131 (12%)

Query: 65  LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAI--GAKF-VPL-----RK 116
           +D K  ++  + F  R+ D GI+ +  IEA G      IA AI  G K  VP+     +K
Sbjct: 30  IDPKLMQEVGEEFARRFADDGITKIVTIEASG------IAPAIMTGLKLGVPVVFARKKK 83

Query: 117 PNKLPGEVISEAYV--LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERM 174
           P  L   +++ +     +  T  + +    +   +R L+IDD +A G      V + ++ 
Sbjct: 84  PLTLTDNLLTASVHSFTKQTTSTVAVSGEFLSDQDRVLIIDDFLANGQAAHGLVDIAKQA 143

Query: 175 GAEVVECACVV 185
           GA++     V+
Sbjct: 144 GAKIAGIGIVI 154

This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides]. Length = 191

>gnl|CDD|237519 PRK13812, PRK13812, orotate phosphoribosyltransferase; Provisional

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 4/72 (5%)

Query: 124 VISEAYVLEYGT-DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECA 182
           VI+     EYGT +R+E   G ++ GE  +V++D+  TG +   AV  L   GA V    
Sbjct: 85  VIARKQAKEYGTGNRIE---GRLDEGEEVVVLEDIATTGQSAVDAVEALREAGATVNRVL 141

Query: 183 CVVGLPEGQRRL 194
            VV   EG R  
Sbjct: 142 VVVDREEGAREN 153

Length = 176

>gnl|CDD|223970 COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 143 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV 184
             IE  +  L++DD+  TG TL  A +LL   GA+ V    +
Sbjct: 179 KGIEEPKNVLLVDDVYTTGATLKEAAKLLREAGAKRVFVLTL 220

Length = 225

>gnl|CDD|235072 PRK02812, PRK02812, ribose-phosphate pyrophosphokinase; Provisional

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)

Query: 148 GERALVIDDLVATGGTLSAAVRLLERMGA-EVVECA 182
           G+ A+++DD++ TGGT+    RLL + GA +V  CA
Sbjct: 230 GKTAILVDDMIDTGGTICEGARLLRKEGAKQVYACA 265

Length = 330

>gnl|CDD|180714 PRK06827, PRK06827, phosphoribosylpyrophosphate synthetase; Provisional

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL-PEGQRRLD 195
           G+  L++DD++A+GG++  A + L+  GA+ +  A   G    G  + D
Sbjct: 264 GKDVLIVDDMIASGGSMIDAAKELKSRGAKKIIVAATFGFFTNGLEKFD 312

Length = 382

>gnl|CDD|223925 COG0856, COG0856, Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 9/118 (7%)

Query: 86  ISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAI 145
           + VV GI   G      +A  +G +      P K   +  +     + G+  +  +  ++
Sbjct: 87  VDVVVGIAISGVPLATMVAYELGKELAIYH-PRKHRKDEGAG----KGGS--ISSNFASV 139

Query: 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILV 203
           E G+R +++DD++ TG T+   +  L+  G + V    +    +G   ++G P+  L+
Sbjct: 140 E-GKRCVIVDDVITTGSTIKETIEQLKEEGGKPVLVVVLAD-KKGVDEIEGVPVESLL 195

Length = 203

>gnl|CDD|235960 PRK07199, PRK07199, phosphoribosylpyrophosphate synthetase; Provisional

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 147 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV 184
            G   +++DD+V+TG TL  A R L   GA   +C  V
Sbjct: 210 AGRTPVLVDDIVSTGRTLIEAARQLRAAGAASPDCVVV 247

Length = 301

>gnl|CDD|179535 PRK03092, PRK03092, ribose-phosphate pyrophosphokinase; Provisional

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)

Query: 142 VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 187
           VG +E G   +++DD++ TGGT++ AVR L+  GA+ V  A   G+
Sbjct: 196 VGDVE-GRTCVLVDDMIDTGGTIAGAVRALKEAGAKDVIIAATHGV 240

Length = 304

>gnl|CDD|215297 PLN02541, PLN02541, uracil phosphoribosyltransferase

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEV--VECACVVGLPEGQRRLDGK 197
              G R LV+D ++ATGGT+ AA+  L   GA V  +   C V  P   ++L  K
Sbjct: 154 FPEGSRVLVVDPMLATGGTIVAAIDELVSRGASVEQIRVVCAVAAPPALKKLSEK 208

Length = 244

>gnl|CDD|215209 PLN02369, PLN02369, ribose-phosphate pyrophosphokinase

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 148 GERALVIDDLVATGGTLSAAVRLLERMGA-EVVECAC--VVGLPEGQRRLDGKPLYILV 203
           G+ A+++DD++ T GT++    LL + GA EV  CA   V   P  +R   G    ++V
Sbjct: 202 GKVAIMVDDMIDTAGTITKGAALLHQEGAREVYACATHAVFSPPAIERLSSGLFQEVIV 260

Length = 302

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	211
COG0462	314	PrsA Phosphoribosylpyrophosphate synthetase [Nucle	100.0
KOG1712	183	consensus Adenine phosphoribosyl transferases [Nuc	100.0
PLN02293	187	adenine phosphoribosyltransferase	99.97
PRK02269	320	ribose-phosphate pyrophosphokinase; Provisional	99.97
PRK07199	301	phosphoribosylpyrophosphate synthetase; Provisiona	99.97
PRK00553	332	ribose-phosphate pyrophosphokinase; Provisional	99.97
PTZ00145	439	phosphoribosylpyrophosphate synthetase; Provisiona	99.97
PRK04923	319	ribose-phosphate pyrophosphokinase; Provisional	99.97
PRK03092	304	ribose-phosphate pyrophosphokinase; Provisional	99.97
PRK02304	175	adenine phosphoribosyltransferase; Provisional	99.96
PRK02458	323	ribose-phosphate pyrophosphokinase; Provisional	99.96
PRK00934	285	ribose-phosphate pyrophosphokinase; Provisional	99.96
TIGR01090	169	apt adenine phosphoribosyltransferase. A phylogene	99.96
KOG1448	316	consensus Ribose-phosphate pyrophosphokinase [Nucl	99.96
PRK06827	382	phosphoribosylpyrophosphate synthetase; Provisiona	99.96
PRK02812	330	ribose-phosphate pyrophosphokinase; Provisional	99.96
PRK01259	309	ribose-phosphate pyrophosphokinase; Provisional	99.96
PLN02369	302	ribose-phosphate pyrophosphokinase	99.95
PLN02297	326	ribose-phosphate pyrophosphokinase	99.94
TIGR01251	308	ribP_PPkin ribose-phosphate pyrophosphokinase. In	99.94
PRK13810	187	orotate phosphoribosyltransferase; Provisional	99.94
COG0503	179	Apt Adenine/guanine phosphoribosyltransferases and	99.94
PRK13809	206	orotate phosphoribosyltransferase; Provisional	99.94
PRK09219	189	xanthine phosphoribosyltransferase; Validated	99.93
TIGR01744	191	XPRTase xanthine phosphoribosyltransferase. This m	99.93
PRK12560	187	adenine phosphoribosyltransferase; Provisional	99.93
PRK13812	176	orotate phosphoribosyltransferase; Provisional	99.92
TIGR01743	268	purR_Bsub pur operon repressor, Bacillus subtilis	99.92
PRK09213	271	pur operon repressor; Provisional	99.92
PRK13811	170	orotate phosphoribosyltransferase; Provisional	99.91
PRK05500	477	bifunctional orotidine 5'-phosphate decarboxylase/	99.91
PRK08558	238	adenine phosphoribosyltransferase; Provisional	99.91
PRK02277	200	orotate phosphoribosyltransferase-like protein; Pr	99.9
PRK00455	202	pyrE orotate phosphoribosyltransferase; Validated	99.9
TIGR00336	173	pyrE orotate phosphoribosyltransferase. The conser	99.9
TIGR01367	187	pyrE_Therm orotate phosphoribosyltransferase, Ther	99.9
COG0461	201	PyrE Orotate phosphoribosyltransferase [Nucleotide	99.9
PRK07322	178	adenine phosphoribosyltransferase; Provisional	99.88
PRK06031	233	phosphoribosyltransferase; Provisional	99.82
PF00156	125	Pribosyltran: Phosphoribosyl transferase domain; I	99.82
COG0856	203	Orotate phosphoribosyltransferase homologs [Nucleo	99.8
COG1040	225	ComFC Predicted amidophosphoribosyltransferases [G	99.74
KOG1503	354	consensus Phosphoribosylpyrophosphate synthetase-a	99.73
TIGR00201	190	comF comF family protein. This protein is found in	99.72
PRK09162	181	hypoxanthine-guanine phosphoribosyltransferase; Pr	99.71
PRK08525	445	amidophosphoribosyltransferase; Provisional	99.7
TIGR01203	166	HGPRTase hypoxanthine phosphoribosyltransferase. S	99.7
PF14572	184	Pribosyl_synth: Phosphoribosyl synthetase-associat	99.69
PRK11595	227	DNA utilization protein GntX; Provisional	99.68
PLN02238	189	hypoxanthine phosphoribosyltransferase	99.67
PRK15423	178	hypoxanthine phosphoribosyltransferase; Provisiona	99.62
PRK09177	156	xanthine-guanine phosphoribosyltransferase; Valida	99.61
PRK05793	469	amidophosphoribosyltransferase; Provisional	99.59
PRK09246	501	amidophosphoribosyltransferase; Provisional	99.58
PRK05205	176	bifunctional pyrimidine regulatory protein PyrR ur	99.58
TIGR01134	442	purF amidophosphoribosyltransferase. Alternate nam	99.57
PRK07272	484	amidophosphoribosyltransferase; Provisional	99.57
PTZ00271	211	hypoxanthine-guanine phosphoribosyltransferase; Pr	99.55
PLN02440	479	amidophosphoribosyltransferase	99.54
PRK06781	471	amidophosphoribosyltransferase; Provisional	99.53
PRK07349	500	amidophosphoribosyltransferase; Provisional	99.52
COG0634	178	Hpt Hypoxanthine-guanine phosphoribosyltransferase	99.5
PRK08341	442	amidophosphoribosyltransferase; Provisional	99.5
PRK09123	479	amidophosphoribosyltransferase; Provisional	99.49
PTZ00149	241	hypoxanthine phosphoribosyltransferase; Provisiona	99.48
COG2236	192	Predicted phosphoribosyltransferases [General func	99.48
PRK07631	475	amidophosphoribosyltransferase; Provisional	99.48
PRK06388	474	amidophosphoribosyltransferase; Provisional	99.47
PRK07847	510	amidophosphoribosyltransferase; Provisional	99.45
PRK00129	209	upp uracil phosphoribosyltransferase; Reviewed	99.33
COG0034	470	PurF Glutamine phosphoribosylpyrophosphate amidotr	99.3
TIGR01091	207	upp uracil phosphoribosyltransferase. that include	99.28
COG2065	179	PyrR Pyrimidine operon attenuation protein/uracil	99.13
COG1926	220	Predicted phosphoribosyltransferases [General func	99.13
PF13793	116	Pribosyltran_N: N-terminal domain of ribose phosph	99.05
KOG0572	474	consensus Glutamine phosphoribosylpyrophosphate am	98.96
KOG3367	216	consensus Hypoxanthine-guanine phosphoribosyltrans	98.81
PLN02541	244	uracil phosphoribosyltransferase	98.53
COG0035	210	Upp Uracil phosphoribosyltransferase [Nucleotide t	98.46
PF14681	207	UPRTase: Uracil phosphoribosyltransferase; PDB: 1V	98.36
PF15609	191	PRTase_2: Phosphoribosyl transferase	98.17
PF15610	274	PRTase_3: PRTase ComF-like	96.75
KOG1017	267	consensus Predicted uracil phosphoribosyltransfera	95.68
PF13793	116	Pribosyltran_N: N-terminal domain of ribose phosph	93.65
PRK02812	330	ribose-phosphate pyrophosphokinase; Provisional	91.0
PTZ00145	439	phosphoribosylpyrophosphate synthetase; Provisiona	90.29
KOG1377	261	consensus Uridine 5'- monophosphate synthase/orota	89.97
PRK07199	301	phosphoribosylpyrophosphate synthetase; Provisiona	88.89
PRK03092	304	ribose-phosphate pyrophosphokinase; Provisional	88.88
PLN02369	302	ribose-phosphate pyrophosphokinase	88.86
PRK00934	285	ribose-phosphate pyrophosphokinase; Provisional	88.74
PRK01259	309	ribose-phosphate pyrophosphokinase; Provisional	88.63
PRK00553	332	ribose-phosphate pyrophosphokinase; Provisional	88.58
PRK02269	320	ribose-phosphate pyrophosphokinase; Provisional	88.53
PRK04923	319	ribose-phosphate pyrophosphokinase; Provisional	87.45
COG0462	314	PrsA Phosphoribosylpyrophosphate synthetase [Nucle	87.1
TIGR01251	308	ribP_PPkin ribose-phosphate pyrophosphokinase. In	86.09
PRK02458	323	ribose-phosphate pyrophosphokinase; Provisional	83.58

>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

Probab=100.00  E-value=4.9e-38  Score=267.65  Aligned_cols=187  Identities=22%  Similarity=0.264  Sum_probs=154.9

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|||||+||||+||+++|     +|+|+||++.               ++||++|+||+....+++||+.+.+++++...
T Consensus        46 ~EsVrg~dVfI~qs~~~p-----vnd~lmELLi~idA~k~asA~~It~ViPY~gYARQDk~~~~repIsaklvA~lL~~a  120 (314)
T COG0462          46 EESVRGKDVFIIQSTSPP-----VNDNLMELLIMIDALKRASAKRITAVIPYFGYARQDKAFKPREPISAKLVANLLETA  120 (314)
T ss_pred             cccccCCeEEEEeCCCCC-----cCHHHHHHHHHHHHHHhcCCceEEEEeecchhhccCcccCCCCCEeHHHHHHHHHHc
Confidence            599999999999999976     9999999843               79999999999655899999999999999877


Q ss_pred             HHHH-HHHHHHHHHHhh---------------------c-C--CcEEEEecCCccchHHHHHHHhCCCeEEeecCCC-CC
Q 028297           68 KAFK-DTVDIFVDRYRD---------------------M-G--ISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNK-LP  121 (211)
Q Consensus        68 ~~~~-~~~~~la~~i~~---------------------~-~--~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~-~~  121 (211)
                      +..+ .+.+.|+.++++                     . .  -.+||+|+.||..+|+.+|+.||.|+.++.|+|. .+
T Consensus       121 G~drv~TvDlH~~qiqgfFdipvdnl~a~p~l~~~~~~~~~~~d~vVVSPD~Ggv~RAr~~A~~L~~~~a~i~K~R~~~~  200 (314)
T COG0462         121 GADRVLTVDLHAPQIQGFFDIPVDNLYAAPLLAEYIREKYDLDDPVVVSPDKGGVKRARALADRLGAPLAIIDKRRDSSP  200 (314)
T ss_pred             CCCeEEEEcCCchhhcccCCCccccccchHHHHHHHHHhcCCCCcEEECCCccHHHHHHHHHHHhCCCEEEEEEeecCCC
Confidence            6666 666666666442                     2 1  2499999999999999999999999999998884 33


Q ss_pred             CceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCe
Q 028297          122 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPL  199 (211)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l  199 (211)
                      +..            .+....+++ +||+|+|||||++||+|+..|+++|++.||++|+++|+|+.++  +.+++++..+
T Consensus       201 ~~v------------~~~~~~gdV-~gk~~iiVDDiIdTgGTi~~Aa~~Lk~~GAk~V~a~~tH~vfs~~a~~~l~~~~i  267 (314)
T COG0462         201 NVV------------EVMNLIGDV-EGKDVVIVDDIIDTGGTIAKAAKALKERGAKKVYAAATHGVFSGAALERLEASAI  267 (314)
T ss_pred             CeE------------EEeeccccc-CCCEEEEEeccccccHHHHHHHHHHHHCCCCeEEEEEEchhhChHHHHHHhcCCC
Confidence            322            111123554 9999999999999999999999999999999999999999998  7788887677


Q ss_pred             EEEEcccc
Q 028297          200 YILVEPRL  207 (211)
Q Consensus       200 ~sl~~~~~  207 (211)
                      ..++.-+.
T Consensus       268 ~~vivTnT  275 (314)
T COG0462         268 DEVIVTDT  275 (314)
T ss_pred             CEEEEeCC
Confidence            77765443

>KOG1712 consensus Adenine phosphoribosyl transferases [Nucleotide transport and metabolism]

Probab=100.00  E-value=2e-32  Score=210.43  Aligned_cols=165  Identities=66%  Similarity=1.097  Sum_probs=158.1

Q ss_pred             eeeeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhh---cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCC
Q 028297           42 WSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPN  118 (211)
Q Consensus        42 ~~~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~---~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~  118 (211)
                      .+.+.+|+||.+||.+.|+..++.||..++.+.+.+.+++++   .++|+|++++.|||.++..+|.++|++++.+||.+
T Consensus        13 ~~ir~~pdFPk~GI~F~Di~pll~dP~af~~lidlf~~h~~~~~~~~Id~iaGlEaRGFLFGP~iAlalG~~fVPiRK~g   92 (183)
T KOG1712|consen   13 TAIRVVPDFPKKGIMFQDITPLLLDPKAFKKLIDLFVDHYRETFEMKIDVIAGLEARGFLFGPSIALALGAGFVPIRKPG   92 (183)
T ss_pred             HhheeCCCCCCCceehhhhhhhhcCHHHHHHHHHHHHHHHHHHhcCcceEEEeeeecceecCcHHHHHhCCCeeecccCC
Confidence            445679999999999999999999999999999999999987   47999999999999999999999999999999999


Q ss_pred             CCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCC
Q 028297          119 KLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDG  196 (211)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~  196 (211)
                      ++|+++.+.+|..+|+.+.+++..+.+.+|.+|+||||++.||+|+.+|.++|.+.||+++.++|+++.++  |+++|.+
T Consensus        93 KLPG~~i~~~Y~lEYg~d~~Emq~~Ai~~g~rvvvVDDllATGGTl~AA~~Ll~r~ga~vvE~~~vieL~~LkGr~kL~~  172 (183)
T KOG1712|consen   93 KLPGEVISESYELEYGEDRFEMQKGAIKPGQRVVVVDDLLATGGTLAAATELLERVGAEVVECACVIELPELKGREKLKG  172 (183)
T ss_pred             CCCCceeEEEEeeecCccceeeeccccCCCCeEEEEechhhcCccHHHHHHHHHHhccEEEEEEEEEEccccCCccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988  9999999


Q ss_pred             CCeEEEEccc
Q 028297          197 KPLYILVEPR  206 (211)
Q Consensus       197 ~~l~sl~~~~  206 (211)
                      .|+++|+++.
T Consensus       173 ~pl~~Ll~~~  182 (183)
T KOG1712|consen  173 KPLFSLLEYQ  182 (183)
T ss_pred             CccEEEeecC
Confidence            9999999875

>PLN02293 adenine phosphoribosyltransferase

Probab=99.97  E-value=2.1e-30  Score=209.16  Aligned_cols=163  Identities=79%  Similarity=1.245  Sum_probs=149.6

Q ss_pred             eeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCce
Q 028297           45 FFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEV  124 (211)
Q Consensus        45 ~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~  124 (211)
                      +.+++||.+++.|+|++.++.+|+.++.+++.+++++++.++|+|++++.+|+++|..+|..|++|+..+||.++.++..
T Consensus        22 ~~~~~~p~~gi~f~D~~~l~~~p~~~~~~~~~l~~~~~~~~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~rK~~k~~~~~  101 (187)
T PLN02293         22 RVVPDFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYRDMGISVVAGIEARGFIFGPPIALAIGAKFVPLRKPGKLPGEV  101 (187)
T ss_pred             ccCCCCCcCCcEEEECHHHhhCHHHHHHHHHHHHHHHhhcCCCEEEEeCCCchHHHHHHHHHHCCCEEEEEecCCCCCce
Confidence            56899999999999999999999999999999999998878999999999999999999999999999999988887777


Q ss_pred             eeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEE
Q 028297          125 ISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYIL  202 (211)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl  202 (211)
                      .+..+..+++++.+++..+.+.+|++||||||+++||+|+.+++++|+++|++.++++++++.++  +++++.++|+++|
T Consensus       102 ~~~~~~~~~g~~~l~l~~~~i~~G~rVlIVDDvitTG~T~~~~~~~l~~~Ga~~v~~~~~~~~~~~~g~~~l~~~~~~sl  181 (187)
T PLN02293        102 ISEEYVLEYGTDCLEMHVGAVEPGERALVIDDLIATGGTLCAAINLLERAGAEVVECACVIELPELKGREKLNGKPLFVL  181 (187)
T ss_pred             EEEEEeccCCceEEEEEcCccCCCCEEEEEeccccchHHHHHHHHHHHHCCCEEEEEEEEEEcCCccHHHHhcCCceEEE
Confidence            76666667777777766666668999999999999999999999999999999999999999887  9999999999999


Q ss_pred             Ecccc
Q 028297          203 VEPRL  207 (211)
Q Consensus       203 ~~~~~  207 (211)
                      +++++
T Consensus       182 ~~~~~  186 (187)
T PLN02293        182 VESRG  186 (187)
T ss_pred             EecCC
Confidence            98865

>PRK02269 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.97  E-value=3.5e-31  Score=229.82  Aligned_cols=189  Identities=16%  Similarity=0.199  Sum_probs=149.1

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+||||+||++.|     +|+++||++.               ++||++|++|++...++++++.+.+++++...
T Consensus        47 ~~~vrg~dV~iv~s~~~~-----~nd~lmelll~~~alr~~~a~~i~~V~PYl~YaRQDr~~~~~e~isak~~a~ll~~~  121 (320)
T PRK02269         47 EESIRGHHVFILQSTSSP-----VNDNLMEILIMVDALKRASAESINVVMPYYGYARQDRKARSREPITSKLVANMLEVA  121 (320)
T ss_pred             CCCCCCCEEEEEecCCCC-----ccchHHHHHHHHHHHHHhCCCeEEEEEeccccchhhcccCCCCCchHHHHHHHHhhc
Confidence            489999999999999755     8999999843               79999999999999999999999999888642


Q ss_pred             ----------------------HHHHHHHHHHHHHHhhc----CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297           68 ----------------------KAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP  121 (211)
Q Consensus        68 ----------------------~~~~~~~~~la~~i~~~----~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~  121 (211)
                                            -..-.....+++++.+.    +..+||+|+.||..+|..+|+.||+|+..++|++...
T Consensus       122 g~d~vit~D~H~~~~~~~f~~p~~~l~~~p~l~~~i~~~~~~~~~~vvVsPd~G~~~~A~~lA~~lg~~~~~~~k~r~~~  201 (320)
T PRK02269        122 GVDRLLTVDLHAAQIQGFFDIPVDHLMGAPLIADYFDRRGLVGDDVVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVD  201 (320)
T ss_pred             CCCEEEEECCChHHHhccccCCchhhhhHHHHHHHHHHhCCCCCCcEEEEECccHHHHHHHHHHHhCCCEEEEEecccCC
Confidence                                  11123344455555443    2358999999999999999999999998877765321


Q ss_pred             CceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCe
Q 028297          122 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPL  199 (211)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l  199 (211)
                      ....         ...+.+ .+. .+||+|||||||+|||+|+.++++.|+++||++|+++|+|+.++  +.++|.+.++
T Consensus       202 ~~~~---------~~~~~~-~gd-v~Gr~viIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~tHglf~~~a~~~l~~~~i  270 (320)
T PRK02269        202 KMNT---------SEVMNI-IGN-VKGKKCILIDDMIDTAGTICHAADALAEAGATEVYASCTHPVLSGPALDNIQKSAI  270 (320)
T ss_pred             CCce---------eEEEEe-ccc-cCCCEEEEEeeecCcHHHHHHHHHHHHHCCCCEEEEEEECcccCchHHHHHHhCCC
Confidence            1000         112222 245 48999999999999999999999999999999999999999987  7788877678


Q ss_pred             EEEEcccc
Q 028297          200 YILVEPRL  207 (211)
Q Consensus       200 ~sl~~~~~  207 (211)
                      ..+++-+-
T Consensus       271 ~~iv~Tdt  278 (320)
T PRK02269        271 EKLVVLDT  278 (320)
T ss_pred             CEEEEeCC
Confidence            77776554

>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional

Probab=99.97  E-value=5.3e-31  Score=226.93  Aligned_cols=186  Identities=19%  Similarity=0.188  Sum_probs=146.8

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+||||+||+++|      |++|||++.               ++||++|++|++...++++++.+.+++++.. 
T Consensus        44 ~~~v~g~~V~ivqs~~~~------n~~l~elll~~~alr~~~a~~i~~ViPY~~YaRqDr~~~~ge~isak~vA~ll~~-  116 (301)
T PRK07199         44 DSPVAGRTVVLVCSLDRP------DEKLLPLLFAAEAARELGARRVGLVAPYLAYMRQDIAFHPGEAISQRHFARLLSG-  116 (301)
T ss_pred             CCCCCCCEEEEECCCCCC------cHHHHHHHHHHHHHHHcCCCeEEEEeecccccccccccCCCCCccHHHHHHHHHh-
Confidence            379999999999998743      889999843               7999999999999999999999999998852 


Q ss_pred             HHHH-------------------------HHHHHHHHHHhhc-CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297           68 KAFK-------------------------DTVDIFVDRYRDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP  121 (211)
Q Consensus        68 ~~~~-------------------------~~~~~la~~i~~~-~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~  121 (211)
                      +..+                         .....+++++.+. +.++|++|+.||..+|..+|+.+++|+..++|++...
T Consensus       117 ~~d~vit~DlH~~~~~~~~~~f~ip~~nl~~~~~la~~l~~~~~~~vVVsPd~g~~~~a~~la~~l~~~~~~~~K~R~~~  196 (301)
T PRK07199        117 SFDRLVTVDPHLHRYPSLSEVYPIPAVVLSAAPAIAAWIRAHVPRPLLIGPDEESEQWVAAVAERAGAPHAVLRKTRHGD  196 (301)
T ss_pred             hcCeEEEEeccchhhHHhcCcccCCccccchHHHHHHHHHhcCCCcEEEEeCCChHHHHHHHHHHhCCCEEEEEEEecCC
Confidence            1111                         2334445555432 3469999999999999999999999998888766432


Q ss_pred             CceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCe
Q 028297          122 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPL  199 (211)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l  199 (211)
                      +..            .+....+...+||+|+|||||+|||+|+.++++.|+++||++|+++++|+.++  +.++|++.++
T Consensus       197 ~~~------------~~~~~~~~~v~Gr~vIIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~tHgvfs~~a~~~l~~~~i  264 (301)
T PRK07199        197 RDV------------EISLPDAAPWAGRTPVLVDDIVSTGRTLIEAARQLRAAGAASPDCVVVHALFAGDAYSALAAAGI  264 (301)
T ss_pred             CeE------------EEEeccCcccCCCEEEEEecccCcHHHHHHHHHHHHHCCCcEEEEEEEeeeCChHHHHHHHhCCC
Confidence            211            11111233359999999999999999999999999999999999999999887  7888876667


Q ss_pred             EEEEcccc
Q 028297          200 YILVEPRL  207 (211)
Q Consensus       200 ~sl~~~~~  207 (211)
                      ..+++-+-
T Consensus       265 ~~iv~Tdt  272 (301)
T PRK07199        265 ARVVSTDT  272 (301)
T ss_pred             CEEEEeCC
Confidence            77766543

>PRK00553 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.97  E-value=2.5e-31  Score=231.48  Aligned_cols=187  Identities=20%  Similarity=0.209  Sum_probs=147.0

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+||||+||++.|     +|+++||++.               ++||++|++|++...++++++.+.+++++...
T Consensus        51 ~~~vrg~dV~ivqs~~~p-----~nd~l~eLll~~~alr~~~a~~i~~ViPYl~YaRQDr~~~~~e~isak~vA~ll~~~  125 (332)
T PRK00553         51 DESVRNKDVVIFQSTCSP-----VNDSLMELLIAIDALKRGSAKSITAILPYYGYARQDRKTAGREPITSKLVADLLTKA  125 (332)
T ss_pred             CCCCCCCEEEEEcCCCCC-----CchHHHHHHHHHHHHHHcCCCeEEEEeeccccchhhcccCCCCCccHHHHHHHHHhc
Confidence            379999999999999766     7999999843               79999999999999999999999999988642


Q ss_pred             HHHH----------------------HHHHHHHHHHhh---cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCC
Q 028297           68 KAFK----------------------DTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG  122 (211)
Q Consensus        68 ~~~~----------------------~~~~~la~~i~~---~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~  122 (211)
                      +..+                      .....+++++.+   .+..+|++|+.||..+|..+|+.||+|+..++|++...+
T Consensus       126 g~d~vit~DlH~~~i~~~F~ipv~~l~a~~~~~~~~~~~~~~~~~vvVsPD~gg~~rA~~lA~~lg~~~~vi~K~r~~~~  205 (332)
T PRK00553        126 GVTRVTLTDIHSDQTQGFFDIPVDILRTYHVFLSRVLELLGKKDLVVVSPDYGGVKRARLIAESLELPLAIIDKRRPKHN  205 (332)
T ss_pred             CCCEEEEEeCChHHHHhhcCCCcceeechHHHHHHHHHhcCCCCeEEEEECCCcHHHHHHHHHHhCCCEEEEEEecCCcc
Confidence            1111                      122234444433   133489999999999999999999999999888764322


Q ss_pred             ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCC----
Q 028297          123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDG----  196 (211)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~----  196 (211)
                      .           ...+.+ .+. .+||+|+|||||++||+|+.++++.|+++||+.|+++++|+.++  +.++|.+    
T Consensus       206 ~-----------~~~~~~-~gd-v~Gk~VIIVDDIi~TG~Tl~~aa~~Lk~~GA~~V~~~atHglf~~~a~~~l~~~~~~  272 (332)
T PRK00553        206 V-----------AESINV-LGE-VKNKNCLIVDDMIDTGGTVIAAAKLLKKQKAKKVCVMATHGLFNKNAIQLFDEAFKK  272 (332)
T ss_pred             e-----------EeeEEe-ecc-CCCCEEEEEeccccchHHHHHHHHHHHHcCCcEEEEEEEeeecCchHHHHHHhcccc
Confidence            1           112332 244 49999999999999999999999999999999999999999987  7777753    


Q ss_pred             CCeEEEEcccc
Q 028297          197 KPLYILVEPRL  207 (211)
Q Consensus       197 ~~l~sl~~~~~  207 (211)
                      .++..+++-+-
T Consensus       273 ~~i~~iv~Tnt  283 (332)
T PRK00553        273 KLIDKLFVSNS  283 (332)
T ss_pred             CCCCEEEEeCC
Confidence            36777776544

>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional

Probab=99.97  E-value=4.7e-31  Score=234.78  Aligned_cols=187  Identities=19%  Similarity=0.234  Sum_probs=149.0

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+|||||||++.|     +|++|||++.               ++||++|++|++...++++++.+.+++++...
T Consensus       161 ~e~VrG~dV~IVqS~~~p-----vNd~LmELLllidAlr~agAkrItlViPYl~YaRQDR~~~~gepIsak~vA~lL~~~  235 (439)
T PTZ00145        161 LESIRGKDVYIIQPTCPP-----VNENLIELLLMISTCRRASAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEAM  235 (439)
T ss_pred             CCCcCCCeEEEEecCCCC-----CcHHHHHHHHHHHHHHHhccCeEEEEeecccchheecccCCCCChhHHHHHHHHHHc
Confidence            489999999999999866     8999999843               79999999999999899999999999998643


Q ss_pred             HHHH-HH-----------------------HHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhC------CCeEEee
Q 028297           68 KAFK-DT-----------------------VDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIG------AKFVPLR  115 (211)
Q Consensus        68 ~~~~-~~-----------------------~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~------~p~~~~~  115 (211)
                      +..+ .+                       ...+++++...  ...+||+|+.||..+|+.+|..|+      +++..+.
T Consensus       236 G~d~VitvDlHs~~i~~fF~~~iPvdnl~a~~~~a~~i~~~~l~~pVVVsPD~Ga~~RAr~~A~~L~~~~~~~~~~avl~  315 (439)
T PTZ00145        236 GVDRVVAIDLHSGQIQGFFGPRVPVDNLEAQLIGLDYFTKKDLYKPVIVSPDAGGVYRARKFQDGLNHRGISDCGIAMLI  315 (439)
T ss_pred             CCCeEEEEecChHHHHhhcCCCcccccccccHHHHHHHhhcCCCccEEEccCcchHHHHHHHHHHhccccccCCCEEEEE
Confidence            1111 11                       12234444332  235899999999999999999997      7888888


Q ss_pred             cCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcc
Q 028297          116 KPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRR  193 (211)
Q Consensus       116 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~  193 (211)
                      |+|..+++..           .+.+ .++ ++||+|+|||||++||+|+.+|++.|+++||+.|+++++|+.++  +.++
T Consensus       316 K~R~~~~~v~-----------~~~l-vgd-V~Gk~vIIVDDIIdTG~Tl~~aa~~Lk~~GA~~V~~~~THglfs~~A~~r  382 (439)
T PTZ00145        316 KQRTKPNEIE-----------KMDL-VGN-VYDSDVIIVDDMIDTSGTLCEAAKQLKKHGARRVFAFATHGLFSGPAIER  382 (439)
T ss_pred             eecCCCCceE-----------EEec-cCC-CCCCEEEEEcceeCcHHHHHHHHHHHHHcCCCEEEEEEEcccCChhHHHH
Confidence            7775433221           2332 245 49999999999999999999999999999999999999999997  7888


Q ss_pred             cCCCCeEEEEcccc
Q 028297          194 LDGKPLYILVEPRL  207 (211)
Q Consensus       194 l~~~~l~sl~~~~~  207 (211)
                      |.+.++..+++-+-
T Consensus       383 l~~s~i~~IvvTdT  396 (439)
T PTZ00145        383 IEASPLEEVVVTDT  396 (439)
T ss_pred             HhcCCCCEEEEeCC
Confidence            98778888876554

>PRK04923 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.97  E-value=8.5e-31  Score=227.01  Aligned_cols=187  Identities=18%  Similarity=0.179  Sum_probs=145.3

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCC-CCCCeeheeHHHHhcC
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIW-WAAGIMFQDITTLLLD   66 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~-~~~~i~~~d~~~l~~~   66 (211)
                      .|+|||+||||+||++.|     +|+++||++.               ++||++|++|++... ++++++.+.+++++..
T Consensus        48 ~~~v~g~~V~iiqs~~~p-----~nd~lmeLl~~~~alr~~~a~~i~~ViPYl~YaRQDr~~~~~~~~isak~va~ll~~  122 (319)
T PRK04923         48 EESVRRQEVFVIQPTCAP-----SAENLMELLVLIDALKRASAASVTAVIPYFGYSRQDRRMRSSRVPITAKVAAKMISA  122 (319)
T ss_pred             CCCcCCCeEEEEecCCCC-----CchHHHHHHHHHHHHHHcCCcEEEEEeeccccccccccccCCCCCccHHHHHHHHHh
Confidence            478999999999999766     7999999843               799999999999874 4678999999988864


Q ss_pred             HHHHH----------------------HHHHHHHHHHhh---cCCcEEEEecCCccchHHHHHHHhC-CCeEEeecCCCC
Q 028297           67 HKAFK----------------------DTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKL  120 (211)
Q Consensus        67 ~~~~~----------------------~~~~~la~~i~~---~~~d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~  120 (211)
                      .+..+                      .....+++++.+   .+..+||+|+.||..+|..+|+.|+ +|+..+.|+|..
T Consensus       123 ~g~d~vitvD~H~~~~~~~f~~p~~~l~~~~~l~~~i~~~~~~~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~  202 (319)
T PRK04923        123 MGADRVLTVDLHADQIQGFFDVPVDNVYASPLLLADIWRAYGTDNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPR  202 (319)
T ss_pred             cCCCEEEEEeCChHHHHhhcCCCceeeeChHHHHHHHHHhcCCCCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCC
Confidence            21111                      112233444422   1335899999999999999999998 899998887643


Q ss_pred             CCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCC
Q 028297          121 PGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKP  198 (211)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~  198 (211)
                      .+..           ..+.. .+. .+||+|+|||||++||+|+.++++.|+++||++|+++++|+.++  +.++|++.+
T Consensus       203 ~~~~-----------~~~~~-~gd-v~Gr~viIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~THgvfs~~a~~~l~~s~  269 (319)
T PRK04923        203 ANVA-----------TVMNI-IGD-VQGKTCVLVDDLVDTAGTLCAAAAALKQRGALKVVAYITHPVLSGPAVDNINNSQ  269 (319)
T ss_pred             CCce-----------EEEec-ccC-CCCCEEEEEecccCchHHHHHHHHHHHHCCCCEEEEEEECcccCchHHHHHhhCC
Confidence            2211           12222 245 49999999999999999999999999999999999999999997  778887777


Q ss_pred             eEEEEcccc
Q 028297          199 LYILVEPRL  207 (211)
Q Consensus       199 l~sl~~~~~  207 (211)
                      +..+++-+-
T Consensus       270 i~~iv~Tdt  278 (319)
T PRK04923        270 LDELVVTDT  278 (319)
T ss_pred             CCEEEEeCC
Confidence            777776543

>PRK03092 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.97  E-value=1.1e-30  Score=225.36  Aligned_cols=189  Identities=22%  Similarity=0.198  Sum_probs=145.8

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+|||||||++.|     +|+++||++.               ++||++|++|++...++++++.+.+++++...
T Consensus        31 ~~~v~g~~v~ii~s~~~p-----~nd~l~ell~~~~a~r~~~a~~i~~ViPYl~YaRQDr~~~~~e~isak~va~lL~~~  105 (304)
T PRK03092         31 EESVRGCDAFVLQSHTAP-----INKWLMEQLIMIDALKRASAKRITVVLPFYPYARQDKKHRGREPISARLVADLFKTA  105 (304)
T ss_pred             CCCCCCCEEEEEeCCCCC-----CcHHHHHHHHHHHHHHHcCCCeEEEEEecccccccccccCCCCCccHHHHHHHHHhc
Confidence            379999999999999866     8999999843               79999999999999899999999999998642


Q ss_pred             HHHH----------------------HHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhC-CCeEEeecCCCCC
Q 028297           68 KAFK----------------------DTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLP  121 (211)
Q Consensus        68 ~~~~----------------------~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~~  121 (211)
                      +..+                      .....+++++.+.   +..+||+|+.||+.+|..+|+.|+ .|+..++|.+...
T Consensus       106 g~d~vitvD~H~~~~~~~f~~p~~~l~~~~~la~~i~~~~~~~~~vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~  185 (304)
T PRK03092        106 GADRIMTVDLHTAQIQGFFDGPVDHLFAMPLLADYVRDKYDLDNVTVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPT  185 (304)
T ss_pred             CCCeEEEEecChHHHHhhcCCCeeeEechHHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccC
Confidence            1111                      1233444555332   234999999999999999999999 9998887765321


Q ss_pred             CceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCe
Q 028297          122 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPL  199 (211)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l  199 (211)
                      ....         .....+ .+. .+||+|+|||||++||+|+.++++.|++.||+++.++++|+.++  +.++|.+.++
T Consensus       186 ~~~~---------~~~~~~-~~d-v~gr~viIVDDIi~TG~Tl~~aa~~Lk~~Ga~~I~~~~tH~v~~~~a~~~l~~~~~  254 (304)
T PRK03092        186 VPNQ---------VVANRV-VGD-VEGRTCVLVDDMIDTGGTIAGAVRALKEAGAKDVIIAATHGVLSGPAAERLKNCGA  254 (304)
T ss_pred             CCCc---------eEEEec-CcC-CCCCEEEEEccccCcHHHHHHHHHHHHhcCCCeEEEEEEcccCChHHHHHHHHCCC
Confidence            1000         001111 234 49999999999999999999999999999999999999999986  7788876566


Q ss_pred             EEEEcccc
Q 028297          200 YILVEPRL  207 (211)
Q Consensus       200 ~sl~~~~~  207 (211)
                      ..++.-+.
T Consensus       255 ~~i~~t~t  262 (304)
T PRK03092        255 REVVVTDT  262 (304)
T ss_pred             CEEEEeee
Confidence            66665443

>PRK02304 adenine phosphoribosyltransferase; Provisional

Probab=99.96  E-value=1.1e-28  Score=197.38  Aligned_cols=163  Identities=53%  Similarity=0.913  Sum_probs=142.3

Q ss_pred             eeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCce
Q 028297           45 FFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEV  124 (211)
Q Consensus        45 ~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~  124 (211)
                      ...|.||.+++.+.|+++++.+|+..+.+++.+++.+++.++|+|++++.||+++|..+|..|++|+..++|.++.++..
T Consensus        11 ~~~~~~~~~~~~~~d~~~l~~~p~~~~~~~~~la~~~~~~~~d~Ivgv~~~Gi~~a~~la~~l~~p~~~~rk~~~~~~~~   90 (175)
T PRK02304         11 RTIPDFPKPGILFRDITPLLADPEAFREVIDALVERYKDADIDKIVGIEARGFIFGAALAYKLGIGFVPVRKPGKLPRET   90 (175)
T ss_pred             ccCCCCCCCCcEEEeChhHhcCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHhCCCEEEEEcCCCCCCce
Confidence            45789999999999999999999999999999999998767899999999999999999999999999888877655554


Q ss_pred             eeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEE
Q 028297          125 ISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYIL  202 (211)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl  202 (211)
                      .+..++..++.+.+.+..+...+|++||||||++|||+|+.++++.|+++||++++++|++++.+  |.+++.++|++||
T Consensus        91 ~~~~~~~~~~~~~l~l~~~~~~~g~~VLIVDDivtTG~Tl~~~~~~l~~~Ga~~v~v~vl~~~~~~~g~~~l~~~~~~sl  170 (175)
T PRK02304         91 ISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGTLEAAIKLLERLGAEVVGAAFVIELPDLGGREKLEGYPVKSL  170 (175)
T ss_pred             EeEEEecccCceEEEEchhhcCCCCEEEEEeCCccccHHHHHHHHHHHHcCCEEEEEEEEEEcccccchhhcCCCceEEE
Confidence            44455555555566654444569999999999999999999999999999999999999999986  7888889999999


Q ss_pred             Ecccc
Q 028297          203 VEPRL  207 (211)
Q Consensus       203 ~~~~~  207 (211)
                      ++++.
T Consensus       171 ~~~~~  175 (175)
T PRK02304        171 VKFDG  175 (175)
T ss_pred             EEeCC
Confidence            99863

>PRK02458 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.96  E-value=1.6e-30  Score=225.81  Aligned_cols=186  Identities=20%  Similarity=0.233  Sum_probs=146.2

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+|||||||++.|     +|+++||++.               ++||.+|++|++...++++++.+.+++++...
T Consensus        51 ~~~v~g~dV~ii~s~~~~-----~nd~l~eLll~~~alr~~~a~~i~lViPYl~YaRQDr~~~~ge~isak~~a~lL~~~  125 (323)
T PRK02458         51 EESVRGDDIYIIQSTSFP-----VNDHLWELLIMIDACKRASANTVNVVLPYFGYARQDRIAKPREPITAKLVANMLVKA  125 (323)
T ss_pred             cCCcCCCeEEEEecCCCC-----CchHHHHHHHHHHHHHHcCCceEEEEEeccccchhhcccCCCCCchHHHHHHHHhhc
Confidence            478999999999999755     7999999843               79999999999998899999999999998653


Q ss_pred             HHHH-H---------------------HHHHHHHHHhhc----CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297           68 KAFK-D---------------------TVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP  121 (211)
Q Consensus        68 ~~~~-~---------------------~~~~la~~i~~~----~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~  121 (211)
                      +..+ .                     ....+++++.+.    +..+|++|+.||..+|..+|+.|++|+..+++++...
T Consensus       126 g~d~vitvD~H~~~i~~~F~~p~~nl~~~p~~~~~l~~~~~~~~~~vvV~pd~Ga~~~A~~la~~L~~~~~~~~~~r~~~  205 (323)
T PRK02458        126 GVDRVLTLDLHAVQVQGFFDIPVDNLFTVPLFAKHYCKKGLSGSDVVVVSPKNSGIKRARSLAEYLDAPIAIIDYAQDDS  205 (323)
T ss_pred             CCCeEEEEecCcHHhhccccCCceEEEEHHHHHHHHHHhCCCCCceEEEEECCChHHHHHHHHHHhCCCEEEEEEecCCC
Confidence            2111 1                     122334444332    2248999999999999999999999998777544211


Q ss_pred             CceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCe
Q 028297          122 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPL  199 (211)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l  199 (211)
                      ..           . ...+ .+. .+||+|+|||||++||+|+.++++.|+++||++|+++++|+.++  +.++|.+.++
T Consensus       206 ~~-----------~-~~~i-~gd-V~gk~viIVDDIidTG~Tl~~aa~~Lk~~GA~~V~~~~tHgif~~~a~~~l~~s~i  271 (323)
T PRK02458        206 ER-----------E-EGYI-IGD-VAGKKAILIDDILNTGKTFAEAAKIVEREGATEIYAVASHGLFAGGAAEVLENAPI  271 (323)
T ss_pred             cc-----------e-eecc-ccc-cCCCEEEEEcceeCcHHHHHHHHHHHHhCCCCcEEEEEEChhcCchHHHHHhhCCC
Confidence            10           0 1111 244 49999999999999999999999999999999999999999987  7778887778


Q ss_pred             EEEEcccc
Q 028297          200 YILVEPRL  207 (211)
Q Consensus       200 ~sl~~~~~  207 (211)
                      ..+++-+-
T Consensus       272 ~~iv~TdT  279 (323)
T PRK02458        272 KEILVTDS  279 (323)
T ss_pred             CEEEEECC
Confidence            88776554

>PRK00934 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.96  E-value=2.1e-29  Score=215.75  Aligned_cols=186  Identities=17%  Similarity=0.213  Sum_probs=144.6

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+||||+||+. |     +|++|||++.               ++||.+|++|++...++++++.+.+++++...
T Consensus        41 ~~~v~g~~v~i~~~~~-~-----~~d~l~ell~~~~alr~~ga~~i~~v~PY~~YaRqDr~~~~ge~isak~~a~ll~~~  114 (285)
T PRK00934         41 LGEIDGEDVVIISTTY-P-----QDENLVELLLLIDALRDEGAKSITLVIPYLGYARQDKRFKPGEPISARAIAKIISAY  114 (285)
T ss_pred             CCCcCCCEEEEEeCCC-C-----CcHHHHHHHHHHHHHHHcCCCeEEEEecCCcccccccccCCCCCccHHHHHHHHHHh
Confidence            3799999999999975 4     7999999843               79999999999999999999999999987531


Q ss_pred             H---------------------HHHHHHHHHHHHHhhc-CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCcee
Q 028297           68 K---------------------AFKDTVDIFVDRYRDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVI  125 (211)
Q Consensus        68 ~---------------------~~~~~~~~la~~i~~~-~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~  125 (211)
                      .                     ..-..+..+++++... +.++|++|+.||+.+|..+|+.+++|+..++|.+...... 
T Consensus       115 ~d~vitvD~H~~~~~~~f~~~~~~l~a~~~la~~i~~~~~~~vvv~pd~Ga~~~a~~lA~~l~~~~~~i~k~r~~~~~~-  193 (285)
T PRK00934        115 YDRIITINIHEPSILEFFPIPFINLDAAPLIAEYIGDKLDDPLVLAPDKGALELAKEAAEILGCEYDYLEKTRISPTEV-  193 (285)
T ss_pred             cCEEEEEcCChHHHcCcCCCcEeEeecHHHHHHHHHhcCCCCEEEEeCCchHHHHHHHHHHhCCCEEEEEEEecCCCeE-
Confidence            1                     0012344555555331 3359999999999999999999999998887765322211 


Q ss_pred             eeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEE
Q 028297          126 SEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILV  203 (211)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~  203 (211)
                                 .+...... .+||+|||||||++||+|+.++++.|+++||+++.++++|+.++  +.+++.+..+..++
T Consensus       194 -----------~~~~~~~~-v~Gk~VlIVDDIi~TG~Tl~~aa~~Lk~~GA~~V~~~~~H~i~~~~a~~~l~~~~i~~i~  261 (285)
T PRK00934        194 -----------EIAPKNLD-VKGKDVLIVDDIISTGGTMATAIKILKEQGAKKVYVACVHPVLVGDAILKLYNAGVDEII  261 (285)
T ss_pred             -----------EEeccccc-cCCCEEEEEcCccccHHHHHHHHHHHHHCCCCEEEEEEEeeccCcHHHHHHHhCCCCEEE
Confidence                       11111123 48999999999999999999999999999999999999999876  77888766677766


Q ss_pred             cccc
Q 028297          204 EPRL  207 (211)
Q Consensus       204 ~~~~  207 (211)
                      +.+.
T Consensus       262 ~tnt  265 (285)
T PRK00934        262 VTDT  265 (285)
T ss_pred             EcCC
Confidence            5543

>TIGR01090 apt adenine phosphoribosyltransferase

Probab=99.96  E-value=4.8e-28  Score=192.74  Aligned_cols=162  Identities=46%  Similarity=0.834  Sum_probs=140.0

Q ss_pred             eeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCc
Q 028297           44 FFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGE  123 (211)
Q Consensus        44 ~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~  123 (211)
                      ..+.++||.+++.+.|++.++.+|+..+.+++.+++++.+.++|+|++++.||+++|..+|..|++|+..++|+++.++.
T Consensus         5 ~~~~~~~~~~~~~~~d~~~~l~~p~~~~~~~~~la~~i~~~~~d~ivgi~~~G~~~A~~la~~L~~~~~~i~k~~~~~~~   84 (169)
T TIGR01090         5 IRSIPDFPKKGILFRDITPLLNNPELFRFLIDLLVERYKDANIDYIVGPEARGFIFGAALAYKLGVGFVPVRKPGKLPGE   84 (169)
T ss_pred             cccCCCCCCCCceeEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEeehhccHHHHHHHHHHHCCCEEEEEeCCCCCCc
Confidence            45689999999999999999999999999999999999877889999999999999999999999999888877665555


Q ss_pred             eeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCC-CCeE
Q 028297          124 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDG-KPLY  200 (211)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~-~~l~  200 (211)
                      ..+..++..++.+.+++......+||+|||||||+|||+|+.++++.|+++||++++++++.++.+  |.+.+.+ +|++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDIitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~g~~~i~~~~~~~  164 (169)
T TIGR01090        85 TISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATGGTAEATDELIRKLGGEVVEAAFLIELKDLNGRAKLEPNVPVF  164 (169)
T ss_pred             eeeeEEeeccCceEEEEehhhcCCcCEEEEEeccccchHHHHHHHHHHHHcCCEEEEEEEEEEccccChHHHhccCCceE
Confidence            555555555655556654444469999999999999999999999999999999999999999874  7778854 8999


Q ss_pred             EEEcc
Q 028297          201 ILVEP  205 (211)
Q Consensus       201 sl~~~  205 (211)
                      ||+++
T Consensus       165 sl~~~  169 (169)
T TIGR01090       165 SLLEY  169 (169)
T ss_pred             EEEeC
Confidence            99864

A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.

>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism]

Probab=99.96  E-value=1.1e-30  Score=218.85  Aligned_cols=180  Identities=23%  Similarity=0.229  Sum_probs=149.3

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      -|||||+|||++||.+.|     +|+++|||++               ++||++|++|+.++..|.+++.+.++|++...
T Consensus        45 ~esvR~~dV~iiqsgsg~-----ind~lmELLI~I~ac~~asa~~vTaViP~Fpyarq~~k~~~r~~i~aklVanlls~a  119 (316)
T KOG1448|consen   45 GESVRGEDVYIIQSGSGP-----INDNLMELLIMINACKRASASRVTAVIPYFPYARQDKKDKSRAPILAKLVANLLSSA  119 (316)
T ss_pred             ccccccCcEEEeccCCCc-----chHHHHHHHHHHHhcchhhhheeEEeccCCccccchhhhhhhhhHHHHHHHhhhhcc
Confidence            489999999999999865     9999999844               79999999999999999999999999999988


Q ss_pred             HHHH-HHHHHHHHHHhh-------------------------cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297           68 KAFK-DTVDIFVDRYRD-------------------------MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP  121 (211)
Q Consensus        68 ~~~~-~~~~~la~~i~~-------------------------~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~  121 (211)
                      +..+ .++++|+.|++.                         ++.-+||+|+.||..++..+|+.|+..+..+.|.+...
T Consensus       120 G~dhvItmDlHa~Q~qgfF~ipVdnly~~p~~l~~ir~~~~~~~~~vivSPdaGgaKR~~s~ad~l~~~fali~ker~k~  199 (316)
T KOG1448|consen  120 GADHVITMDLHASQIQGFFDIPVDNLYAEPAVLNYIRENIPDSENAVIVSPDAGGAKRVTSLADRLNLDFALIHKERRKA  199 (316)
T ss_pred             CCceEEEecccchhhCceeeccchhhccchHHHHHHHhhCCCccceEEECCCcchhhhhHHHHHhhcchhhhhhhhhhcc
Confidence            8666 777777776442                         12347889999999999999999999887766555433


Q ss_pred             CceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCe
Q 028297          122 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPL  199 (211)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l  199 (211)
                      +++.          ..+. ..|++ +||.++||||+++||+|+..|++.|.++||++|+++++|+.++  +.++++...+
T Consensus       200 ~~v~----------~~m~-LVGDv-~gkvailVDDm~dt~GTl~~aa~~L~~~GA~kV~a~~THgVfs~~a~er~~~s~~  267 (316)
T KOG1448|consen  200 NEVD----------IRMV-LVGDV-KGKVAILVDDMADTCGTLIKAADKLLEHGAKKVYAIVTHGVFSGPAIERLNESAL  267 (316)
T ss_pred             cccc----------eEEE-EEecc-CCcEEEEecccccccchHHHHHHHHHhcCCceEEEEEcceeccccHHHHhhhccc
Confidence            2221          0222 34675 9999999999999999999999999999999999999999998  7888864333

>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional

Probab=99.96  E-value=1.9e-29  Score=222.47  Aligned_cols=195  Identities=17%  Similarity=0.126  Sum_probs=141.8

Q ss_pred             cccccceeeEEEeeeccc--C-------cccceeeeeeeeee--------------eeeecceeeeeecCCCCCCeehee
Q 028297            3 SEETRGYRAFLKQSVWCL--T-------SQYQVSFSFFFLFF--------------CFVFSSWSFFFFQIWWAAGIMFQD   59 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~i~~~d   59 (211)
                      .|+|||+|||||||++.-  |       ...++|++||||+.              ++||++|++|++. .++++++.+.
T Consensus        72 ~~~Vrg~dV~ivqs~~~~~v~~~~~~~~~~~p~nd~lmeLll~idalragA~rIt~ViPY~~YaRQDr~-~~~e~itak~  150 (382)
T PRK06827         72 LESVRGKDIYILQDVGNYSVTYNMFGEKNHMSPDDHFQDLKRTIDAIRGKARRITVIMPFLYESRQHKR-KGRESLDCAL  150 (382)
T ss_pred             CCCCCCCeEEEEecCCcccccccccccccCCCCcHHHHHHHHHHHHHhcCCCeEEEEeecccccccccc-cCCCCccHHH
Confidence            379999999999998620  0       00138999999733              7999999999998 6899999999


Q ss_pred             HHHHhcCHHHHH-H----------------------HHHHHHHHHhhc--------CCcEEEEecCCccchHHHHHHHhC
Q 028297           60 ITTLLLDHKAFK-D----------------------TVDIFVDRYRDM--------GISVVAGIEARGFVFGPSIALAIG  108 (211)
Q Consensus        60 ~~~l~~~~~~~~-~----------------------~~~~la~~i~~~--------~~d~Iv~i~~gG~~~A~~lA~~L~  108 (211)
                      +++++...+..+ .                      ....+++++.+.        +..+||+|+.||..+|..+|..||
T Consensus       151 vA~lL~~~G~d~vitvDlHs~~i~~~F~~~pvdnl~a~~~l~~~i~~~i~~l~~d~~~~VVVsPD~Gg~~rA~~~A~~Lg  230 (382)
T PRK06827        151 ALQELEELGVDNIITFDAHDPRIENAIPLMGFENLYPSYQIIKALLKNEKDLEIDKDHLMVISPDTGAMDRAKYYASVLG  230 (382)
T ss_pred             HHHHHHHcCCCeEEEecCChHHhcccCCCCCcCCcCchHHHHHHHHHhcccccccCCCcEEEEECccchHHHHHHHHHhC
Confidence            998885421111 1                      111223333211        346899999999999999999999


Q ss_pred             CCeEEeecCCCCCCceeeeeeeeecCcee-EEE-ecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEe
Q 028297          109 AKFVPLRKPNKLPGEVISEAYVLEYGTDR-LEM-HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  186 (211)
Q Consensus       109 ~p~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~  186 (211)
                      +|+.+++|+|.......        +.+. ... ..+...+||+|||||||++||+|+.++++.|+++||+.|+++++|+
T Consensus       231 ~~~ai~~K~R~~~~~~~--------g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~Tl~~aa~~Lk~~GA~~V~~~~tH~  302 (382)
T PRK06827        231 VDLGLFYKRRDYSRVVN--------GRNPIVAHEFLGRDVEGKDVLIVDDMIASGGSMIDAAKELKSRGAKKIIVAATFG  302 (382)
T ss_pred             CCEEEEEcccCCccccc--------CCCceEEEecCCcccCCCEEEEEeCCcCcHHHHHHHHHHHHHcCCCEEEEEEEee
Confidence            99999888764322110        1111 111 1242359999999999999999999999999999999999999999


Q ss_pred             Cch-hhcccCC----CCeEEEEccc
Q 028297          187 LPE-GQRRLDG----KPLYILVEPR  206 (211)
Q Consensus       187 ~~~-~~~~l~~----~~l~sl~~~~  206 (211)
                      .++ +.++|..    .++..+++-+
T Consensus       303 vf~~a~~~l~~~~~~g~i~~iv~Td  327 (382)
T PRK06827        303 FFTNGLEKFDKAYEEGYFDRIIGTN  327 (382)
T ss_pred             cChHHHHHHHhhcccCCCCEEEEeC
Confidence            976 7777642    2466666544

>PRK02812 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.96  E-value=1.1e-29  Score=220.92  Aligned_cols=187  Identities=19%  Similarity=0.237  Sum_probs=146.5

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+|||||||++.|     +|++|||++.               ++||.+|++|++...++++++.+.+++++...
T Consensus        63 ~~~vrg~~V~ivqs~~~p-----~nd~l~eLll~~~alr~~ga~ri~~ViPYl~YaRQDr~~~~~e~isak~vA~lL~~~  137 (330)
T PRK02812         63 QESIRGCDVYLIQPTCAP-----VNDHLMELLIMVDACRRASARQITAVIPYYGYARADRKTAGRESITAKLVANLITKA  137 (330)
T ss_pred             CCCCCCCEEEEECCCCCC-----ccHHHHHHHHHHHHHHHhCCceEEEEEecccccccccccCCCCCchHHHHHHHHHhc
Confidence            479999999999998766     8999999843               79999999999999999999999999888643


Q ss_pred             HHHH----------------------HHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhC-CCeEEeecCCCCCC
Q 028297           68 KAFK----------------------DTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPG  122 (211)
Q Consensus        68 ~~~~----------------------~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~~~  122 (211)
                      +..+                      .....+++++.+.  +-.+|++|+.||..+|..+|+.|+ .|+..+.|++...+
T Consensus       138 g~d~vitvDlH~~~~~~fF~ipv~nl~~~~~l~~~i~~~~~~~~vvVsPD~gg~~ra~~~A~~L~~~~~~~~~k~R~~~~  217 (330)
T PRK02812        138 GADRVLAMDLHSAQIQGYFDIPCDHVYGSPVLLDYLASKNLEDIVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHN  217 (330)
T ss_pred             CCCEEEEEECCchHHcCccCCCceeeeChHHHHHHHHhcCCCCeEEEEECCccHHHHHHHHHHhCCCCEEEEEeeccCCc
Confidence            2111                      1223334444332  335899999999999999999995 89988887664222


Q ss_pred             ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeE
Q 028297          123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLY  200 (211)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~  200 (211)
                      ..           ..+.+ .+. .+||+|+||||+++||+|+.++++.|+++||+.|+++++|+.++  +.++|.+.++.
T Consensus       218 ~~-----------~~~~~-~~~-v~g~~viiVDDii~TG~T~~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~id  284 (330)
T PRK02812        218 VA-----------EVLNV-IGD-VKGKTAILVDDMIDTGGTICEGARLLRKEGAKQVYACATHAVFSPPAIERLSSGLFE  284 (330)
T ss_pred             ee-----------eeEec-ccc-CCCCEEEEEccccCcHHHHHHHHHHHhccCCCeEEEEEEcccCChHHHHHHhhCCCC
Confidence            11           12222 234 49999999999999999999999999999999999999999987  77888766677


Q ss_pred             EEEcccc
Q 028297          201 ILVEPRL  207 (211)
Q Consensus       201 sl~~~~~  207 (211)
                      .++..+.
T Consensus       285 ~iv~tnt  291 (330)
T PRK02812        285 EVIVTNT  291 (330)
T ss_pred             EEEEeCC
Confidence            7766543

>PRK01259 ribose-phosphate pyrophosphokinase; Provisional

Probab=99.96  E-value=3.5e-29  Score=216.43  Aligned_cols=186  Identities=19%  Similarity=0.226  Sum_probs=146.0

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+||||+||++.|     +|+++||++.               ++||.+|++|++...++++++.+.+++++...
T Consensus        42 ~~~v~g~~V~ii~s~~~~-----~nd~l~eLll~~~alr~~ga~~i~lViPYl~YsRQDr~~~~ge~isak~~a~lL~~~  116 (309)
T PRK01259         42 NENVRGKDVFIIQSTCAP-----TNDNLMELLIMIDALKRASAGRITAVIPYFGYARQDRKARSRVPITAKLVANLLETA  116 (309)
T ss_pred             CCCCCCCEEEEECCCCCC-----CcHHHHHHHHHHHHHHHcCCceEEEEeeccccchhhhhhccCCCchHHHHHHHHhhc
Confidence            378999999999998755     7899999833               79999999999999899999999999988643


Q ss_pred             HHHH----------------------HHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCc
Q 028297           68 KAFK----------------------DTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGE  123 (211)
Q Consensus        68 ~~~~----------------------~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~  123 (211)
                      +..+                      .....+++++.+.  +..+|++|+.||+.+|..+|+.||+|+..++|+++.++.
T Consensus       117 g~d~vitvD~H~~~~~~~f~~p~~~l~~~~~l~~~i~~~~~~~~vvv~pd~Gg~~~A~~la~~Lg~~~~~~~k~r~~~~~  196 (309)
T PRK01259        117 GADRVLTMDLHADQIQGFFDIPVDNLYGSPILLEDIKQKNLENLVVVSPDVGGVVRARALAKRLDADLAIIDKRRPRANV  196 (309)
T ss_pred             CCCEEEEEcCChHHHcCcCCCCceeeeecHHHHHHHHhcCCCCcEEEEECCCcHHHHHHHHHHhCCCEEEEEeeccccee
Confidence            1111                      1234455566443  457999999999999999999999999888776543322


Q ss_pred             eeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEE
Q 028297          124 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI  201 (211)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~s  201 (211)
                      .           ..+.+ .+. .+|++|+|||||++||+|+.++++.|+++|++.+.++++|+.++  +.+++....+..
T Consensus       197 ~-----------~~~~~-~~~-~~g~~vliVDDii~TG~T~~~a~~~l~~~Ga~~v~~~~tH~i~~~~a~~~l~~~~~~~  263 (309)
T PRK01259        197 S-----------EVMNI-IGD-VEGRDCILVDDMIDTAGTLCKAAEALKERGAKSVYAYATHPVLSGGAIERIENSVIDE  263 (309)
T ss_pred             E-----------EEEee-ccc-CCCCEEEEEecccCcHHHHHHHHHHHHccCCCEEEEEEEeeeCChHHHHHHhcCCCCE
Confidence            1           12222 234 48999999999999999999999999999999999999999886  777776545555


Q ss_pred             EEccc
Q 028297          202 LVEPR  206 (211)
Q Consensus       202 l~~~~  206 (211)
                      ++..+
T Consensus       264 iv~t~  268 (309)
T PRK01259        264 LVVTD  268 (309)
T ss_pred             EEEec
Confidence            55443

>PLN02369 ribose-phosphate pyrophosphokinase

Probab=99.95  E-value=3e-28  Score=209.97  Aligned_cols=187  Identities=17%  Similarity=0.200  Sum_probs=144.5

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+||||+||++.|     +|+++||++.               ++||.+|++|++...++++++.+.+++++...
T Consensus        33 ~~~v~g~~V~iv~s~~~p-----~nd~l~eLl~~~~a~r~~~a~~i~~ViPYl~YsRQDr~~~~~e~isak~va~lL~~~  107 (302)
T PLN02369         33 QESVRGCDVFLVQPTCPP-----ANENLMELLIMIDACRRASAKRITAVIPYFGYARADRKTQGRESIAAKLVANLITEA  107 (302)
T ss_pred             CCCCCCCeEEEEecCCCC-----cchHHHHHHHHHHHHHHcCCCeEEEEeecccccccccccCCCCCchHHHHHHHHHhc
Confidence            378999999999999866     7999999843               79999999999998899999999999888642


Q ss_pred             HHHH----------------------HHHHHHHHHHhhc----CCcEEEEecCCccchHHHHHHHh-CCCeEEeecCCCC
Q 028297           68 KAFK----------------------DTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAI-GAKFVPLRKPNKL  120 (211)
Q Consensus        68 ~~~~----------------------~~~~~la~~i~~~----~~d~Iv~i~~gG~~~A~~lA~~L-~~p~~~~~k~~~~  120 (211)
                      +..+                      .....+++++.+.    +.-+|++|+.||..+|..+++.+ +.|+..++|+|..
T Consensus       108 g~d~vi~vDlHs~~i~~~F~ip~~~l~~~~~~~~~i~~~~~~~~~~vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~  187 (302)
T PLN02369        108 GADRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTISSPDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQG  187 (302)
T ss_pred             CCCEEEEEECCchHHhhccCCceecccchHHHHHHHHHhCCCCCceEEEEECcChHHHHHHHHHHcCCCCEEEEEEecCC
Confidence            1111                      1222333444332    12389999999999999999999 7999888877642


Q ss_pred             CCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCC
Q 028297          121 PGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKP  198 (211)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~  198 (211)
                      .+..           ..+.+ .+. .+||+|+|||||++||+|+.++++.|++.|++++.++++|..++  +.++|++..
T Consensus       188 ~~~~-----------~~~~~-~~~-v~g~~viivDDii~TG~Tl~~a~~~l~~~Ga~~v~~~~tH~v~~~~a~~~l~~~~  254 (302)
T PLN02369        188 HNVA-----------EVMNL-IGD-VKGKVAIMVDDMIDTAGTITKGAALLHQEGAREVYACATHAVFSPPAIERLSSGL  254 (302)
T ss_pred             ccee-----------eeEec-CCC-CCCCEEEEEcCcccchHHHHHHHHHHHhCCCCEEEEEEEeeeeCHHHHHHHHhCC
Confidence            2211           12222 234 48999999999999999999999999999999999999998886  777887656


Q ss_pred             eEEEEcccc
Q 028297          199 LYILVEPRL  207 (211)
Q Consensus       199 l~sl~~~~~  207 (211)
                      +..++..+.
T Consensus       255 ~~~iv~t~t  263 (302)
T PLN02369        255 FQEVIVTNT  263 (302)
T ss_pred             CCEEEEeCC
Confidence            666665543

>PLN02297 ribose-phosphate pyrophosphokinase

Probab=99.94  E-value=3.5e-27  Score=204.29  Aligned_cols=182  Identities=15%  Similarity=0.115  Sum_probs=140.3

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcC-
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLD-   66 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~-   66 (211)
                      .|+|||+||||+||++.|       +++||++.               ++||++|++|++...|+++++.+.+++++.. 
T Consensus        61 ~~~vrg~~V~ivqs~~~p-------d~lmELLl~~dAlr~~ga~~i~~ViPY~~YaRQDr~~~~ge~isak~vA~ll~~~  133 (326)
T PLN02297         61 AHGIRGQHVAFLASFSSP-------AVIFEQLSVIYALPKLFVASFTLVLPFFPTGTSERVEREGDVATAFTLARILSNI  133 (326)
T ss_pred             CCCcCCCeEEEECCCCCC-------hHHHHHHHHHHHHHHcCCCEEEEEeeCChhhcCCCCCCCCCCchHHHHHHHHhcc
Confidence            379999999999998732       67999844               7999999999999999999999999988765 


Q ss_pred             ----H-------------HH--------H---HHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEEee
Q 028297           67 ----H-------------KA--------F---KDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVPLR  115 (211)
Q Consensus        67 ----~-------------~~--------~---~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~  115 (211)
                          .             ..        .   ......+++++++.   +-.+||+|+.||..++..++  +++|+..+.
T Consensus       134 ~~~~~g~d~vitvDlH~~~~~~fF~~~~~~l~l~a~~~l~~~i~~~~~~~~~vvVsPD~Ga~~ra~~~a--~~~~~~~~~  211 (326)
T PLN02297        134 PISRGGPTSLVIFDIHALQERFYFGDNVLPCFESGIPLLKKRLQQLPDSDNIVIAFPDDGAWKRFHKQF--EHFPMVVCT  211 (326)
T ss_pred             cccccCCCEEEEEeCCChHHCCccCCcccchhhccHHHHHHHHHhccccCCcEEEecCccHHHHHHHHc--CCCCEEEEE
Confidence                1             00        0   02345566666443   23589999999998877766  678999888


Q ss_pred             cCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcc
Q 028297          116 KPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRR  193 (211)
Q Consensus       116 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~  193 (211)
                      |++.  +...           ......+. .+||+|+|||||++||+|+.++++.|++.|++.|+++++|+.++  +.++
T Consensus       212 K~R~--g~~~-----------~~~~~~~d-v~gr~vlIVDDIidTG~Tl~~aa~~L~~~Ga~~V~~~~THglfs~~a~~~  277 (326)
T PLN02297        212 KVRE--GDKR-----------IVRIKEGN-PAGRHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPNESWER  277 (326)
T ss_pred             eEEC--CCce-----------EEEecccc-cCCCeEEEEecccCcHHHHHHHHHHHHHCCCcEEEEEEECcccChhHHHH
Confidence            7763  1110           11111234 59999999999999999999999999999999999999999997  7777


Q ss_pred             cCC------CCeEEEEcccc
Q 028297          194 LDG------KPLYILVEPRL  207 (211)
Q Consensus       194 l~~------~~l~sl~~~~~  207 (211)
                      |..      .++..++.-+-
T Consensus       278 l~~~~~~~~~~i~~iv~TdT  297 (326)
T PLN02297        278 FTHDNGGPEAGFAYFWITDS  297 (326)
T ss_pred             HHhcccccccCcCEEEEcCC
Confidence            764      36777765543

>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase

Probab=99.94  E-value=1.1e-27  Score=207.33  Aligned_cols=186  Identities=21%  Similarity=0.245  Sum_probs=143.8

Q ss_pred             cccccceeeEEE-eeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcC
Q 028297            3 SEETRGYRAFLK-QSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLD   66 (211)
Q Consensus         3 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~   66 (211)
                      .|+|||+||||+ ||+..|     +|+++||++.               ++||.+|++|++...+.++++.+.+++++..
T Consensus        42 ~~~v~g~~v~iv~~s~~~~-----~~~~l~el~~~~~a~r~~ga~~i~~v~PYl~Y~RqDr~~~~ge~is~~~~a~ll~~  116 (308)
T TIGR01251        42 NESVRGKDVFIIQQSTSAP-----VNDNLMELLIMIDALKRASAKSITAVIPYYGYARQDKKFKSREPISAKLVANLLET  116 (308)
T ss_pred             CCCCCCCeEEEEeCCCCCC-----ccHHHHHHHHHHHHHHHcCCCeEEEEEEecccchhccccCCCCCchHHHHHHHHHH
Confidence            378999999999 998755     7999999843               7999999999999889999999999988864


Q ss_pred             HHHH----------------------HHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCC-C
Q 028297           67 HKAF----------------------KDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL-P  121 (211)
Q Consensus        67 ~~~~----------------------~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~-~  121 (211)
                      .+..                      -.....+++++.+.  +.++|++|+.||+.+|..+|+.||+|+..++|.+.. .
T Consensus       117 ~g~d~vit~DlHs~~~~~~f~ip~~~l~a~~~l~~~i~~~~~~~~viv~pd~g~~~~A~~lA~~Lg~~~~~i~k~r~~~~  196 (308)
T TIGR01251       117 AGADRVLTVDLHSPQIQGFFDVPVDNLYASPVLAEYLKKKILDNPVVVSPDAGGVERAKKVADALGCPLAIIDKRRISAT  196 (308)
T ss_pred             cCCCEEEEecCChHHhcCcCCCceecccCHHHHHHHHHhhCCCCCEEEEECCchHHHHHHHHHHhCCCEEEEEEEecCCC
Confidence            2111                      12233445555433  457999999999999999999999999888776642 1


Q ss_pred             CceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCe
Q 028297          122 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPL  199 (211)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l  199 (211)
                      +..            ......+. .+||+|+||||+++||+|+.++++.|+++||++++++++|+.+.  +.+++....+
T Consensus       197 ~~~------------~~~~~~~~-v~g~~vliVDDii~tG~Tl~~a~~~l~~~ga~~v~~~~th~v~~~~a~~~l~~~~~  263 (308)
T TIGR01251       197 NEV------------EVMNLVGD-VEGKDVVIVDDIIDTGGTIAKAAEILKSAGAKRVIAAATHGVFSGPAIERIANAGV  263 (308)
T ss_pred             CEE------------EEEecccc-cCCCEEEEEccccCCHHHHHHHHHHHHhcCCCEEEEEEEeeecCcHHHHHHHhCCC
Confidence            111            11111233 48999999999999999999999999999999999999998665  6677765556


Q ss_pred             EEEEccc
Q 028297          200 YILVEPR  206 (211)
Q Consensus       200 ~sl~~~~  206 (211)
                      ..+++.+
T Consensus       264 ~~iv~td  270 (308)
T TIGR01251       264 EEVIVTN  270 (308)
T ss_pred             CEEEEeC
Confidence            6666544

In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.

>PRK13810 orotate phosphoribosyltransferase; Provisional

Probab=99.94  E-value=5.8e-26  Score=183.23  Aligned_cols=146  Identities=24%  Similarity=0.342  Sum_probs=129.5

Q ss_pred             CCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeee
Q 028297           50 WWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAY  129 (211)
Q Consensus        50 ~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~  129 (211)
                      ..+++..|.|++.++.+|..++.+++.+++.+++.++|.|++++.+|+++|..+|..+|+|++++||..+..+.      
T Consensus        38 SG~~s~~yiD~~~~~~~p~~~~~i~~~la~~~~~~~~d~I~g~~~~GiplA~~vA~~l~~p~v~vRK~~k~~g~------  111 (187)
T PRK13810         38 SGKKSKYYIDIKKASTDPKTLKLIARQAALRIKEMDVDTVAGVELGGVPLATAVSLETGLPLLIVRKSVKDYGT------  111 (187)
T ss_pred             CCCcCCEEEECchhcCCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHhCCCEEEEecCCCccCC------
Confidence            45566789999999999999999999999999877899999999999999999999999999999987653322      


Q ss_pred             eeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEccc
Q 028297          130 VLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPR  206 (211)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~  206 (211)
                            ..+.  .+.+.+|++|+||||++|||+|+.+++++|+++|++++++++++++.+ ++++|+  |+|++||++++
T Consensus       112 ------~~~~--~g~~~~g~rVlIVDDVitTGgS~~~~i~~l~~~Ga~V~~v~vlvdr~~g~~~~l~~~gi~~~sl~~~~  183 (187)
T PRK13810        112 ------GSRF--VGDLKPEDRIVMLEDVTTSGGSVREAIEVVREAGAYIKYVITVVDREEGAEENLKEADVELVPLVSAS  183 (187)
T ss_pred             ------CceE--EccCCCcCEEEEEEeccCCChHHHHHHHHHHHCCCEEEEEEEEEECCcChHHHHHHcCCcEEEEEEHH
Confidence                  1222  255569999999999999999999999999999999999999999988 788886  89999999999


Q ss_pred             ccc
Q 028297          207 LSV  209 (211)
Q Consensus       207 ~~~  209 (211)
                      |++
T Consensus       184 ~~~  186 (187)
T PRK13810        184 DLL  186 (187)
T ss_pred             Hhh
Confidence            886

>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]

Probab=99.94  E-value=1.6e-25  Score=179.65  Aligned_cols=163  Identities=45%  Similarity=0.749  Sum_probs=146.3

Q ss_pred             eeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCc
Q 028297           44 FFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGE  123 (211)
Q Consensus        44 ~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~  123 (211)
                      .+..+.||..++.|.+....+.++.......+.+++++...++|.|++++.+|+++|..+|..||+|++.+||.++.+..
T Consensus        12 i~~~~~~~~~g~~f~d~~~~~~~~~~~~~~i~~~~~~~~~~~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vRK~~kl~~~   91 (179)
T COG0503          12 IREIPDFPKGGILFVDITLLLGDPELLAKLIDELAERYKDDGIDKIVTIEARGIPLAAAVALELGVPFVPVRKKGKLPEE   91 (179)
T ss_pred             HhhcccccCCCceEEecchhhcCcHHHHHHHHHHHHHhcccCCCEEEEEccccchhHHHHHHHhCCCEEEEEecCCCCCc
Confidence            34678999999999999999999999998888999999888899999999999999999999999999999999998887


Q ss_pred             eeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCe
Q 028297          124 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPL  199 (211)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l  199 (211)
                      .....+..+++...+++..+.+.+|++||||||++.||+|+.+..++++++|+++++++++++.++  ++.++.  +.|+
T Consensus        92 ~~~~~~~~~~~~~~l~~~~~~l~~G~rVlIVDDllaTGgT~~a~~~Ll~~~ga~vvg~~~~ie~~~~~gr~~l~~~~~~v  171 (179)
T COG0503          92 SVVETYYLEYGSETLELHKDALKPGDRVLIVDDLLATGGTALALIELLEQAGAEVVGAAFVIELGELDGRKKLEDDGLPV  171 (179)
T ss_pred             ceeEEEEEeccceEEEEEhhhCCCCCEEEEEecchhcChHHHHHHHHHHHCCCEEEEEEEEEEcCccccchhhccCCceE
Confidence            777777777776678877777779999999999999999999999999999999999999999987  666666  4888


Q ss_pred             EEEEccc
Q 028297          200 YILVEPR  206 (211)
Q Consensus       200 ~sl~~~~  206 (211)
                      ++|..+.
T Consensus       172 ~~l~~~~  178 (179)
T COG0503         172 FSLVRIV  178 (179)
T ss_pred             EEEEecc
Confidence            8887654

>PRK13809 orotate phosphoribosyltransferase; Provisional

Probab=99.94  E-value=2e-25  Score=182.61  Aligned_cols=149  Identities=18%  Similarity=0.242  Sum_probs=129.6

Q ss_pred             CCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeee
Q 028297           51 WAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYV  130 (211)
Q Consensus        51 ~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~  130 (211)
                      .+++-.|.|++.++.+|..++.+++.+++.+.+.++|+|++|+.+|+++|..+|..+++|+.+.||..+.++...     
T Consensus        33 G~~S~~y~D~~~i~~~p~~l~~i~~~l~~~~~~~~~d~IvG~~~~Gi~~A~~vA~~l~~p~~~~RK~~K~~G~~~-----  107 (206)
T PRK13809         33 GEETPIYVDMRLVISSPEVLQTIATLIWRLRPSFNSSLLCGVPYTALTLATSISLKYNIPMVLRRKELKNVDPSD-----  107 (206)
T ss_pred             cCCCCEEEEChhhccCHHHHHHHHHHHHHHhccCCCCEEEEecCccHHHHHHHHHHhCCCEEEEeCCCCCCCCcC-----
Confidence            334447999999999999999999999999877688999999999999999999999999999998877665421     


Q ss_pred             eecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEcccc
Q 028297          131 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRL  207 (211)
Q Consensus       131 ~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~  207 (211)
                            .+++ .+...+|++|+||||++|||+|+.++++.|+++|++++++++++++.. +.++++  |+|++||++++|
T Consensus       108 ------~~~~-~g~~~~g~~VlIVDDViTTG~Ti~~a~~~L~~~G~~vv~v~vlvdr~~~~~~~l~~~gi~v~sl~~~~~  180 (206)
T PRK13809        108 ------AIKV-EGLFTPGQTCLVINDMVSSGKSIIETAVALEEEGLVVREALVFLDRQKGACQPLGPQGIKLSSVFTVPD  180 (206)
T ss_pred             ------EEEE-ccccCCCCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEECcccHHHHHHhcCCCEEEEEEHHH
Confidence                  3433 244569999999999999999999999999999999999999999876 777774  899999999999


Q ss_pred             cccC
Q 028297          208 SVNY  211 (211)
Q Consensus       208 ~~~~  211 (211)
                      ++++
T Consensus       181 l~~~  184 (206)
T PRK13809        181 LIKS  184 (206)
T ss_pred             HHHH
Confidence            8763

>PRK09219 xanthine phosphoribosyltransferase; Validated

Probab=99.93  E-value=6.8e-25  Score=177.28  Aligned_cols=151  Identities=26%  Similarity=0.401  Sum_probs=124.6

Q ss_pred             eeHHHHh---cCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC--Cceeeee-eee
Q 028297           58 QDITTLL---LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP--GEVISEA-YVL  131 (211)
Q Consensus        58 ~d~~~l~---~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~--~~~~~~~-~~~  131 (211)
                      .++..++   .+|+.++.+++.+++.++..++|+|++++.+|+++|..+|..|++|++++||.++.+  +...... ++.
T Consensus        20 ~~~~~~~~~~~~P~~l~~i~~~la~~~~~~~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK~~k~~~~~~~~~~~~~~~   99 (189)
T PRK09219         20 LKVDSFLNHQVDPKLMNEIGKEFARRFKDEGITKILTIEASGIAPAVMAALALGVPVVFAKKKKSLTLTDDVYTATVYSF   99 (189)
T ss_pred             EEEhhhhccccCHHHHHHHHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCCCCCCCceEEEEEeee
Confidence            3444444   899999999999999998878999999999999999999999999999999887664  3332221 111


Q ss_pred             ec-CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEccc
Q 028297          132 EY-GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPR  206 (211)
Q Consensus       132 ~~-~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~  206 (211)
                      .. ....+++..+.+.+|++||||||+++||+|+.+++++++++||+++++++++++..  +++++.  |+|++||++++
T Consensus       100 ~~~~~~~l~i~~~~i~~G~rVlIVDDviaTGgT~~a~~~lv~~aGa~vvgv~~lvd~~~~~g~~~l~~~g~~~~sl~~~~  179 (189)
T PRK09219        100 TKQVTSTVSVSKKFLSEGDRVLIIDDFLANGQAALGLIDIIEQAGAKVAGIGIVIEKSFQDGRKLLEEKGYRVESLARIA  179 (189)
T ss_pred             ccCceEEEEEEhhhCCCCCEEEEEeehhhcChHHHHHHHHHHHCCCEEEEEEEEEEccCccHHHHHHhcCCcEEEEEEee
Confidence            11 22356666666679999999999999999999999999999999999999999873  777774  89999999998


Q ss_pred             cc
Q 028297          207 LS  208 (211)
Q Consensus       207 ~~  208 (211)
                      ++
T Consensus       180 ~~  181 (189)
T PRK09219        180 SL  181 (189)
T ss_pred             ec
Confidence            75

>TIGR01744 XPRTase xanthine phosphoribosyltransferase

Probab=99.93  E-value=9.6e-25  Score=176.76  Aligned_cols=148  Identities=22%  Similarity=0.301  Sum_probs=122.9

Q ss_pred             HHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCC-----ceeeeeeeeecCce
Q 028297           62 TLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG-----EVISEAYVLEYGTD  136 (211)
Q Consensus        62 ~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~-----~~~~~~~~~~~~~~  136 (211)
                      +...+|+.++.+++.+++++.+.++|+|++++.+|+++|..+|.+||+|++++||.++.+.     .....++.. ++..
T Consensus        27 ~~~~~p~~l~~v~~~l~~~~~~~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vRK~~k~~~~~~~~~~~~~s~~~-~~~~  105 (191)
T TIGR01744        27 NHQIDPKLMQEVGEEFARRFADDGITKIVTIEASGIAPAIMTGLKLGVPVVFARKKKPLTLTDNLLTASVHSFTK-QTTS  105 (191)
T ss_pred             ccccCHHHHHHHHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEEEEEeCCCCCCCCcceEEEEEEeec-CccE
Confidence            3347999999999999999987789999999999999999999999999999998876543     111112222 3334


Q ss_pred             eEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEccccccc
Q 028297          137 RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRLSVN  210 (211)
Q Consensus       137 ~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~~~~~  210 (211)
                      .+++..+.+.+|++||||||++|||+|+.+++++++++||+++++++++++..  ++++|+  ++|++||++++++-|
T Consensus       106 ~l~i~~~~l~~G~rVLIVDDvvtTGgT~~a~~~ll~~aGa~Vvgv~~lvd~~~~~g~~~l~~~gvpv~sL~~~~~l~~  183 (191)
T TIGR01744       106 TVAVSGEFLSDQDRVLIIDDFLANGQAAHGLVDIAKQAGAKIAGIGIVIEKSFQNGRQELVELGYRVESLARIQSLEE  183 (191)
T ss_pred             EEEEEHHhCCCcCEEEEEEehhccChHHHHHHHHHHHCCCEEEEEEEEEEecCccHHHHHHhcCCcEEEEEEEeeEeC
Confidence            55655555669999999999999999999999999999999999999999873  778884  799999999987643

This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.

>PRK12560 adenine phosphoribosyltransferase; Provisional

Probab=99.93  E-value=1.5e-24  Score=175.28  Aligned_cols=160  Identities=26%  Similarity=0.358  Sum_probs=130.8

Q ss_pred             eeecCCCCCCe--eheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCC
Q 028297           45 FFFQIWWAAGI--MFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG  122 (211)
Q Consensus        45 ~~~~~~~~~~i--~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~  122 (211)
                      +.++.||.+++  .|.|++.++. |...+.+++.+++.+ +.++|+|++++.+|+++|..+|..+++|+...+|.+....
T Consensus        11 ~~~~~~~~~~~~~~~~D~~~~l~-P~~l~~~~~~l~~~~-~~~~D~Ivg~e~~Gi~lA~~vA~~l~~p~~~~rk~~~~~~   88 (187)
T PRK12560         11 RVVNSGKALTTVNEFTDQLPALR-PKVLKETAKEIIKYI-DKDIDKIVTEEDKGAPLATPVSLLSGKPLAMARWYPYSLS   88 (187)
T ss_pred             CccCCCCCCCcceeEEeChhhcC-HHHHHHHHHHHHHHh-CCCCCEEEEEccccHHHHHHHHHhhCCCEEEeccCCCccc
Confidence            56889999999  8999999999 999999999999988 5689999999999999999999999999999887653322


Q ss_pred             ceeeeeeeeecCceeEE--EecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhccc---C
Q 028297          123 EVISEAYVLEYGTDRLE--MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRL---D  195 (211)
Q Consensus       123 ~~~~~~~~~~~~~~~~~--~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l---~  195 (211)
                      .....  ...+++..++  +..+...+|++||||||+++||+|+.+++++|+++||+++++++++++.+  +++++   .
T Consensus        89 ~~~~~--~~~~~~~~~eg~~~~~~~~~G~rVlIVDDvitTG~T~~~ai~ll~~aGa~vv~v~~vvd~~~~~g~~~l~~~~  166 (187)
T PRK12560         89 ELNYN--VVEIGSEYFEGVVYLNGIEKGDRVAIIDDTLSTGGTVIALIKAIENSGGIVSDVICVIEKTQNNGRKKLFTQT  166 (187)
T ss_pred             ceeEE--eeeeeccceeeeeEccCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchHHHHhhcc
Confidence            11100  0112222222  22234569999999999999999999999999999999999999999975  67777   4


Q ss_pred             CCCeEEEEccccc
Q 028297          196 GKPLYILVEPRLS  208 (211)
Q Consensus       196 ~~~l~sl~~~~~~  208 (211)
                      |+|+.||++++++
T Consensus       167 gv~v~sl~~~~~~  179 (187)
T PRK12560        167 GINVKSLVKIDVK  179 (187)
T ss_pred             CCcEEEEEEEEEe
Confidence            9999999999875

>PRK13812 orotate phosphoribosyltransferase; Provisional

Probab=99.92  E-value=1.4e-24  Score=173.79  Aligned_cols=143  Identities=23%  Similarity=0.292  Sum_probs=122.9

Q ss_pred             CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeee
Q 028297           53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLE  132 (211)
Q Consensus        53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~  132 (211)
                      .+-.|.|.+.+..+|...+.+++.+++.+.+  .|+|++|+.||+++|..+|..||+|+.+.||+++..+.         
T Consensus        28 ~S~~yid~~~~~~~p~~~~~i~~~l~~~i~~--~d~ivg~~~ggi~lA~~lA~~l~~p~~~~rk~~k~yg~---------   96 (176)
T PRK13812         28 TSEYYVDKYLFETDPDCLRLIAEAFADRIDE--DTKLAGVALGAVPLVAVTSVETGVPYVIARKQAKEYGT---------   96 (176)
T ss_pred             cCCEEEeCeeccCCHHHHHHHHHHHHHHhcc--CCEEEEeecchHHHHHHHHHHHCCCEEEEeccCCcCCC---------
Confidence            3336899999999999999999999999864  38999999999999999999999999999987653322         


Q ss_pred             cCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEcccccc
Q 028297          133 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSV  209 (211)
Q Consensus       133 ~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~~~  209 (211)
                         ....  .+.+.+|++||||||+++||+|+.++++.|+++|++++++++++++.+ ++++++  |+|++||++++|++
T Consensus        97 ---~~~~--~g~~~~g~~VlIVDDvitTG~Tl~~~~~~l~~~Ga~vv~~~vlvdr~~~~~~~l~~~g~~v~sL~~~~~~~  171 (176)
T PRK13812         97 ---GNRI--EGRLDEGEEVVVLEDIATTGQSAVDAVEALREAGATVNRVLVVVDREEGARENLADHDVELEALVTASDLL  171 (176)
T ss_pred             ---CCeE--EecCCCcCEEEEEEEeeCCCHHHHHHHHHHHHCCCeEEEEEEEEECCcchHHHHHhcCCcEEEEEeHHHHH
Confidence               1111  144558999999999999999999999999999999999999999987 677774  89999999999987


Q ss_pred             cC
Q 028297          210 NY  211 (211)
Q Consensus       210 ~~  211 (211)
                      ++
T Consensus       172 ~~  173 (176)
T PRK13812        172 AD  173 (176)
T ss_pred             hh
Confidence            64

>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type

Probab=99.92  E-value=5.5e-24  Score=179.60  Aligned_cols=151  Identities=20%  Similarity=0.351  Sum_probs=130.9

Q ss_pred             heeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCC-CCceeeeeeeeecCc
Q 028297           57 FQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL-PGEVISEAYVLEYGT  135 (211)
Q Consensus        57 ~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~-~~~~~~~~~~~~~~~  135 (211)
                      |.++..++.+|...+.+++.++..+.+.++|+|++++.+|+++|..+|.+|++|++++||..+. +++..+.+|...+.+
T Consensus       100 ~~~~s~ll~~P~~l~~ig~~la~~~~~~~iD~VvgvetkGIpLA~avA~~L~vp~vivRK~~K~t~g~~vs~nY~sgs~~  179 (268)
T TIGR01743       100 YLYLTDILGKPSILSKIGKILASVFAEREIDAVMTVATKGIPLAYAVASVLNVPLVIVRKDSKVTEGSTVSINYVSGSSN  179 (268)
T ss_pred             eEEechhhcCHHHHHHHHHHHHHHhcCCCCCEEEEEccchHHHHHHHHHHHCCCEEEEEECCCCCCCCcEEEEEEcccCc
Confidence            6788899999999999999999999887899999999999999999999999999999998765 566666666443221


Q ss_pred             --eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCCCeEEEEccccc
Q 028297          136 --DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLS  208 (211)
Q Consensus       136 --~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~~l~sl~~~~~~  208 (211)
                        ..+.+..+.+.+|++||||||+++||+|+.+++++++++||+++++++++++..+.+++ +.++.||++++++
T Consensus       180 ~ie~m~l~k~~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlve~~~~~~~l-~~~~~SL~~~~~~  253 (268)
T TIGR01743       180 RIQTMSLAKRSLKTGSKVLIIDDFMKAGGTINGMINLLDEFDAEVAGIGVLIDNEGVDEKL-VDDYMSLLTLSNI  253 (268)
T ss_pred             cceEEEEehhhCCCcCEEEEEeeecccCHHHHHHHHHHHHCCCEEEEEEEEEECCCChHHc-CCCceEEEEEeec
Confidence              25666666677999999999999999999999999999999999999999998766666 3489999998876

This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.

>PRK09213 pur operon repressor; Provisional

Probab=99.92  E-value=7.8e-24  Score=179.09  Aligned_cols=151  Identities=24%  Similarity=0.408  Sum_probs=130.3

Q ss_pred             heeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCC-CCceeeeeeeeecCc
Q 028297           57 FQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL-PGEVISEAYVLEYGT  135 (211)
Q Consensus        57 ~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~-~~~~~~~~~~~~~~~  135 (211)
                      |.++.+++.+|...+.+++.++.++.+.++|+|++++.+|+++|..+|.+|++|++++||..+. ++.+.+.+|.....+
T Consensus       102 f~y~sdll~~P~~l~~i~~~la~~~~~~~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK~~K~~~G~~vs~~y~sgs~~  181 (271)
T PRK09213        102 YLYLSDLLGNPSILRKIGRIIASAFADKKIDAVMTVETKGIPLAYAVANYLNVPFVIVRRDSKVTEGSTVSINYVSGSSK  181 (271)
T ss_pred             eEEeCcccCCHHHHHHHHHHHHHHhcccCCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCCCCCCCcEEEEEEecccc
Confidence            6688889999999999999999999887899999999999999999999999999999987765 566666555443221


Q ss_pred             --eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCCCeEEEEccccc
Q 028297          136 --DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLS  208 (211)
Q Consensus       136 --~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~~l~sl~~~~~~  208 (211)
                        ..+++..+.+.+|++||||||+++||+|+.+++++++++||+++++++++++..+.+++ ..|+.||++++++
T Consensus       182 ~ie~m~L~~~~l~~G~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlVd~~~~~~~l-~~~~~SL~~~~~v  255 (271)
T PRK09213        182 RIETMSLSKRSLKEGSRVLIVDDFMKAGGTINGMISLLKEFDAEVVGIGVLVETKEPEERL-VDDYVSLLKLSEV  255 (271)
T ss_pred             cceEEEEeHhhcCCcCEEEEEeeecccCHhHHHHHHHHHHCCCEEEEEEEEEECCCChhhc-CCceEEEEEEehh
Confidence              25666666777999999999999999999999999999999999999999998765665 4589999999876

>PRK13811 orotate phosphoribosyltransferase; Provisional

Probab=99.91  E-value=6.8e-24  Score=169.02  Aligned_cols=137  Identities=28%  Similarity=0.428  Sum_probs=118.1

Q ss_pred             eheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCc
Q 028297           56 MFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGT  135 (211)
Q Consensus        56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~  135 (211)
                      .|.|+..++.+|...+.+++.+++.+   ++|+|++|+.+|+++|..+|..||+|+..+||+++.++..           
T Consensus        30 ~y~d~~~l~~~p~~~~~l~~~l~~~~---~~d~Vvg~~~gGi~~A~~~a~~l~~p~~~~rK~~k~~g~~-----------   95 (170)
T PRK13811         30 YYIDIKTAITHPALLKEIAAEVAKRY---DFDVVAGVAVGGVPLAVAVSLAAGKPYAIIRKEAKDHGKA-----------   95 (170)
T ss_pred             EEEeCchhccCHHHHHHHHHHHHhhC---CCCEEEecCcCcHHHHHHHHHHHCCCEEEEecCCCCCCCc-----------
Confidence            47799999999999999988886543   6899999999999999999999999999999876543321           


Q ss_pred             eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEccccccc
Q 028297          136 DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSVN  210 (211)
Q Consensus       136 ~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~~~~  210 (211)
                       ...  .+. .+|++|+||||+++||+|+.+++++|+++||+++++++++++.+ ++++++  |+|++||+++++++|
T Consensus        96 -~~~--~g~-~~g~~VlIVDDvi~TG~T~~~~~~~l~~~Ga~v~~~~~~vdr~~g~~~~l~~~gv~~~sl~~~~~~~~  169 (170)
T PRK13811         96 -GLI--IGD-VKGKRVLLVEDVTTSGGSALYGIEQLRAAGAVVDDVVTVVDREQGAEELLAELGITLTPLVRVSELLN  169 (170)
T ss_pred             -ceE--Ecc-cCCCEEEEEEecccccHHHHHHHHHHHHCCCeEEEEEEEEECCccHHHHHHhcCCcEEEEeEHHHHhc
Confidence             122  244 48999999999999999999999999999999999999999987 677764  999999999999876

>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated

Probab=99.91  E-value=6.2e-24  Score=192.08  Aligned_cols=157  Identities=19%  Similarity=0.360  Sum_probs=135.6

Q ss_pred             eeeecceeeeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEee
Q 028297           36 CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR  115 (211)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~  115 (211)
                      ++-+..+...+-...|    .|.|++.++.+|..++.+++.+++.+++.++|.|+|++.||+++|..+|..+++|+.+.|
T Consensus       299 al~fG~F~L~SG~~S~----~YiD~~~lls~P~~l~~v~~~la~~l~~~~~D~I~Gia~gGiPlAt~lA~~lg~p~v~vR  374 (477)
T PRK05500        299 CLLFGEYVQASGATFS----YYIDLRKIISNPQLFHQVLSAYAEILKNLTFDRIAGIPYGSLPTATGLALHLHHPMIFPR  374 (477)
T ss_pred             CeEeCcEEECCcCcCC----EEEEChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEEccchHHHHHHHHHHhCCCEEEEe
Confidence            4556665555544444    799999999999999999999999998778999999999999999999999999999999


Q ss_pred             cCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhccc
Q 028297          116 KPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRL  194 (211)
Q Consensus       116 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l  194 (211)
                      |+.+.++.            ..+  ..+.+.+|++||||||++|||+|+.++++.|+++|++++++++++++.+ ++++|
T Consensus       375 Ke~K~~G~------------~~~--ieG~~~~G~rVlIVDDViTTGgSi~eaie~l~~aG~~V~~v~vlVDR~~g~~~~L  440 (477)
T PRK05500        375 KEVKAHGT------------RRL--IEGNFHPGETVVVVDDILITGKSVMEGAEKLKSAGLNVRDIVVFIDHEQGVKDKL  440 (477)
T ss_pred             cCcCccCC------------Cce--EecCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEECCcchHHHH
Confidence            88664432            122  2355679999999999999999999999999999999999999999988 77888


Q ss_pred             C--CCCeEEEEccccccc
Q 028297          195 D--GKPLYILVEPRLSVN  210 (211)
Q Consensus       195 ~--~~~l~sl~~~~~~~~  210 (211)
                      +  |+|++||++++|+++
T Consensus       441 ~~~gv~~~Sl~tl~el~~  458 (477)
T PRK05500        441 QSHGYQAYSVLTISEITE  458 (477)
T ss_pred             HhcCCCEEEEEEHHHHHH
Confidence            5  899999999999876

>PRK08558 adenine phosphoribosyltransferase; Provisional

Probab=99.91  E-value=3.2e-23  Score=173.15  Aligned_cols=150  Identities=23%  Similarity=0.362  Sum_probs=124.3

Q ss_pred             eheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCC-ceeeeeeeeec-
Q 028297           56 MFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG-EVISEAYVLEY-  133 (211)
Q Consensus        56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~-~~~~~~~~~~~-  133 (211)
                      .|.|+..++.+|.+.+.+++.++.++.+.++|+|++++.+|+++|..+|.+||+|++++||.++... ...+ +|.... 
T Consensus        82 gy~d~~~il~~p~~~~~v~~~la~~~~~~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~Rk~~~~~~~~~v~-~y~s~s~  160 (238)
T PRK08558         82 GYVDNSSVVFDPSFLRLIAPVVAERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAKKSKETGVEKFYE-EYQRLAS  160 (238)
T ss_pred             CEEEchhhhcCHHHHHHHHHHHHHHccCCCCCEEEEECcccHHHHHHHHHHHCcCEEEEEecCCCCCcceEE-EeeccCC
Confidence            4899999999999999999999999987789999999999999999999999999999887654322 2222 232111 


Q ss_pred             Cc-eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC---CCCeEEEEccc
Q 028297          134 GT-DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD---GKPLYILVEPR  206 (211)
Q Consensus       134 ~~-~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~---~~~l~sl~~~~  206 (211)
                      +. ..+.+..+.+.+|++||||||+++||+|+.+++++++++||++++++++++... +.+++.   ++|+.+|++++
T Consensus       161 ~~~~~~~l~~~~l~~G~rVLIVDDvi~TG~Tl~~~~~ll~~~ga~vvgv~vlv~~~~~~~~~l~~~~~vpv~sl~~~~  238 (238)
T PRK08558        161 GIEVTLYLPASALKKGDRVLIVDDIIRSGETQRALLDLARQAGADVVGVFFLIAVGEVGIDRAREETDAPVDALYTLE  238 (238)
T ss_pred             CceeEEEecHHHcCCcCEEEEEecccccCHHHHHHHHHHHHcCCEEEEEEEEEecCchHHHHHhHhcCCCEEEEEEeC
Confidence            11 234554445679999999999999999999999999999999999999999987 567664   89999999875

>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional

Probab=99.90  E-value=6.7e-23  Score=167.31  Aligned_cols=149  Identities=19%  Similarity=0.296  Sum_probs=119.9

Q ss_pred             CCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhh--cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeee
Q 028297           51 WAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRD--MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEA  128 (211)
Q Consensus        51 ~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~--~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~  128 (211)
                      |.++..|.|+..+..+|...+.+++.+++.+..  .++|+|+|++.||+++|..+|..|++|+...++++..++...   
T Consensus        49 ~~~~~~yid~~~~~~~~~~l~~i~~~la~~i~~~~~~~D~Ivgi~~gG~~~A~~lA~~L~~~~~~~~~~k~~~~~~~---  125 (200)
T PRK02277         49 PAPKDIHIDWSSIGSSSSRLRYIASAMADMLEKEDEEVDVVVGIAKSGVPLATLVADELGKDLAIYHPKKWDHGEGE---  125 (200)
T ss_pred             CCCCCEEEEChhhccCHHHHHHHHHHHHHHHHhcCCCCCEEEeeccCCHHHHHHHHHHhCCCcEEEecccccccccc---
Confidence            456678999999999999999999999998853  378999999999999999999999999987765442111110   


Q ss_pred             eeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCCCeEEEEccccc
Q 028297          129 YVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLS  208 (211)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~~l~sl~~~~~~  208 (211)
                          .....+..... ..+|++||||||++|||+|+.++++.|+++||+++++++++++. +.++++|+|++||++++.+
T Consensus       126 ----~~~~~~~~~~~-~~~gk~VlIVDDVitTG~Tl~~ai~~l~~~Ga~~v~v~vlvdk~-g~~~~~~vpv~sl~~~~~~  199 (200)
T PRK02277        126 ----KKTGSFSRNFA-SVEGKRCVIVDDVITSGTTMKETIEYLKEHGGKPVAVVVLIDKS-GIDEIDGVPVYSLIRVVRV  199 (200)
T ss_pred             ----cccceeccccc-cCCcCEEEEEeeccCchHHHHHHHHHHHHcCCEEEEEEEEEECc-chhhhcCCCeEEEEEEEec
Confidence                00111211112 25899999999999999999999999999999999999999987 4567789999999998754

>PRK00455 pyrE orotate phosphoribosyltransferase; Validated

Probab=99.90  E-value=4.5e-23  Score=168.53  Aligned_cols=144  Identities=28%  Similarity=0.380  Sum_probs=122.7

Q ss_pred             CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeee
Q 028297           53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYV  130 (211)
Q Consensus        53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~  130 (211)
                      ++-.|.|.+.++.+|...+.+++.+++++.+.  ++|+|++++.||+++|..+|..|++|+...+|..+..+.       
T Consensus        30 ~s~~y~d~~~i~~~p~~~~~~~~~la~~i~~~~~~~d~Ivgi~~gG~~~A~~la~~L~~~~~~~rk~~~~~g~-------  102 (202)
T PRK00455         30 KSPYYFDCRKLLSYPEALALLGRFLAEAIKDSGIEFDVVAGPATGGIPLAAAVARALDLPAIFVRKEAKDHGE-------  102 (202)
T ss_pred             cCCeeEeChhhhcCHHHHHHHHHHHHHHHHhcCCCCCEEEecccCcHHHHHHHHHHhCCCEEEEecccCCCCC-------
Confidence            34468999999999999999999999999876  789999999999999999999999999998875533221       


Q ss_pred             eecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEcccc
Q 028297          131 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRL  207 (211)
Q Consensus       131 ~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~  207 (211)
                          ...+.   +...+|++||||||+++||+|+.++++.|+++|++++++++++++.+ ++++++  |+|++||+++++
T Consensus       103 ----~~~~~---~~~~~g~~VliVDDvi~tG~Tl~~~~~~l~~~Ga~~v~~~vlv~~~~~~~~~~~~~g~~~~sl~~~~~  175 (202)
T PRK00455        103 ----GGQIE---GRRLFGKRVLVVEDVITTGGSVLEAVEAIRAAGAEVVGVAVIVDRQSAAQEVFADAGVPLISLITLDD  175 (202)
T ss_pred             ----CceEE---ccCCCCCEEEEEecccCCcHHHHHHHHHHHHcCCEEEEEEEEEECcchHHHHHHhcCCcEEEEeeHHH
Confidence                01222   22347999999999999999999999999999999999999999975 556554  899999999998


Q ss_pred             ccc
Q 028297          208 SVN  210 (211)
Q Consensus       208 ~~~  210 (211)
                      +.+
T Consensus       176 ~~~  178 (202)
T PRK00455        176 LLE  178 (202)
T ss_pred             HHH
Confidence            765

>TIGR00336 pyrE orotate phosphoribosyltransferase

Probab=99.90  E-value=5e-23  Score=164.47  Aligned_cols=144  Identities=17%  Similarity=0.260  Sum_probs=122.7

Q ss_pred             CCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhh-cCCcEEEEecCCccchHHHHHHHhCCC-----eEEeecCCCCCCce
Q 028297           51 WAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAK-----FVPLRKPNKLPGEV  124 (211)
Q Consensus        51 ~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~-~~~d~Iv~i~~gG~~~A~~lA~~L~~p-----~~~~~k~~~~~~~~  124 (211)
                      .+++-.|.|.+.++.+|...+.+++.+++.+++ .++|+|++++.||+++|..+|..|++|     +...||.++..+..
T Consensus        19 G~~s~~y~d~~~i~~~p~~~~~v~~~~~~~~~~~~~~d~Ivg~~~gG~~~A~~la~~l~~~~~~~~~~~~rk~~k~~g~~   98 (173)
T TIGR00336        19 GRKSPYYFNIKLFNTGPELANLIARYAAAIIKSHLEFDVIAGPALGGIPIATAVSVKLAKPGGDIPLCFNRKEAKDHGEG   98 (173)
T ss_pred             CCcCCEEEECeecCChHHHHHHHHHHHHHHHHhcCCCCEEEccccChHHHHHHHHHHhcCcCCCceEEEEcCCcccCCCC
Confidence            344446899999999999999999999999876 578999999999999999999999999     88887765432221


Q ss_pred             eeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC---CCCe
Q 028297          125 ISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD---GKPL  199 (211)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~---~~~l  199 (211)
                                  ...  .+...+|++||||||+++||+|+.++++.|+++|+++++++|++++.+  +.+++.   |+|+
T Consensus        99 ------------~~~--~g~~~~g~~VlIVDDvi~TG~Tl~~a~~~l~~~Ga~v~~~~vlvdr~~~~~~~~l~~~~gv~~  164 (173)
T TIGR00336        99 ------------GNI--EGELLEGDKVVVVEDVITTGTSILEAVEIIQAAGGQVAGVIIAVDRQERSAGQEFEKEYGLPV  164 (173)
T ss_pred             ------------Cce--ecCCCCCCEEEEEeccccChHHHHHHHHHHHHcCCeEEEEEEEEecCchhHHHHHHHhcCCeE
Confidence                        111  244568999999999999999999999999999999999999999986  677773   9999


Q ss_pred             EEEEccccc
Q 028297          200 YILVEPRLS  208 (211)
Q Consensus       200 ~sl~~~~~~  208 (211)
                      +||++++|+
T Consensus       165 ~sl~~~~~l  173 (173)
T TIGR00336       165 ISLITLKDL  173 (173)
T ss_pred             EEEEeHhhC
Confidence            999999874

The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.

>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family

Probab=99.90  E-value=2.2e-22  Score=162.64  Aligned_cols=134  Identities=27%  Similarity=0.496  Sum_probs=115.3

Q ss_pred             eheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeec
Q 028297           56 MFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY  133 (211)
Q Consensus        56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~  133 (211)
                      .|.|++.++.+|...+.+++.+++++++.  ++|+|++++.||+++|..+|..|++|+...+|.+   +.          
T Consensus        27 ~yid~~~l~~~p~~~~~~~~~La~~i~~~~~~~d~Ivgi~~gGi~~A~~la~~L~~~~i~~~k~~---~~----------   93 (187)
T TIGR01367        27 YFLQSATLLEHPEALMELGGELAQKILDYGLKVDFIVGPAMGGVILGYEVARQLSVRSIFAEREG---GG----------   93 (187)
T ss_pred             eeEechhhhcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEccCcHHHHHHHHHHhCCCeEEEEEeC---Cc----------
Confidence            69999999999999999999999999865  7799999999999999999999999988776543   11          


Q ss_pred             CceeEEEecC-CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCCCeEEEEccc
Q 028297          134 GTDRLEMHVG-AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPR  206 (211)
Q Consensus       134 ~~~~~~~~~~-~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~~l~sl~~~~  206 (211)
                          +.+..+ .+.+|++|||||||++||+|+.++++.|+++||+++++++++++.++.....++|+++|++++
T Consensus        94 ----~~~~~~~~l~~G~~VLIVDDIi~TG~Tl~~a~~~l~~~Ga~vv~~~vlid~~~~~~~~~~~~~~sl~~~~  163 (187)
T TIGR01367        94 ----MKLRRGFAVKPGEKFVAVEDVVTTGGSLLEAIRAIEGQGGQVVGLACIIDRSQGGKPDSGVPLMSLKELE  163 (187)
T ss_pred             ----EEEeecccCCCCCEEEEEEeeecchHHHHHHHHHHHHcCCeEEEEEEEEECcCCCcccCCCCEEEEEEEe
Confidence                111112 235899999999999999999999999999999999999999998755555689999999983

This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.

>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.90  E-value=9.8e-23  Score=164.88  Aligned_cols=144  Identities=26%  Similarity=0.360  Sum_probs=123.4

Q ss_pred             CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc-CCcEEEEecCCccchHHHHHHHhC-CC-eEEeecCCCCCCceeeeee
Q 028297           53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM-GISVVAGIEARGFVFGPSIALAIG-AK-FVPLRKPNKLPGEVISEAY  129 (211)
Q Consensus        53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~-~~d~Iv~i~~gG~~~A~~lA~~L~-~p-~~~~~k~~~~~~~~~~~~~  129 (211)
                      ++..|.|.+.+..+|+..+.++..++..+.++ ++|+|+||+.||+++|..+|..|+ .| +.+.||..+.++..     
T Consensus        28 ~SpyY~d~~~~~~~p~~~~~i~~~~a~~~~~~~~~d~v~G~a~ggiP~A~~~a~~l~~~~~~~~~Rke~K~hG~~-----  102 (201)
T COG0461          28 KSPYYVDLRLFLTGPELLQLIAFALAEIIKEALEFDVVAGPALGGIPLAAATALALAHLPPMAYVRKEAKDHGTG-----  102 (201)
T ss_pred             cCCeEEecccccCCHHHHHHHHHHHHHHhhccCCCcEEEeccccchHHHHHHHHHhccCCcEEEEeceeccCCCc-----
Confidence            44479999999999999999999999999885 899999999999999999999994 22 66778776655542     


Q ss_pred             eeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEccc
Q 028297          130 VLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPR  206 (211)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~  206 (211)
                            +.++   +...+|++|+||||++|||+++.+++++|+++|+.++++++++++.+ +.+.++  |+++.+|++++
T Consensus       103 ------~~ie---G~~~~G~kVvvVEDViTTG~Si~eai~~l~~~G~~V~gv~~ivDR~~~~~~~~~~~g~~~~sl~tl~  173 (201)
T COG0461         103 ------GLIE---GGEVKGEKVVVVEDVITTGGSILEAVEALREAGAEVVGVAVIVDRQSGAKEVLKEYGVKLVSLVTLS  173 (201)
T ss_pred             ------ceeE---ecCCCCCEEEEEEecccCCHhHHHHHHHHHHcCCeEEEEEEEEecchhHHHHHHhcCCceEEEeeHH
Confidence                  1233   34459999999999999999999999999999999999999999987 666665  99999999999


Q ss_pred             cccc
Q 028297          207 LSVN  210 (211)
Q Consensus       207 ~~~~  210 (211)
                      |+++
T Consensus       174 dl~~  177 (201)
T COG0461         174 DLLE  177 (201)
T ss_pred             HHHH
Confidence            9875

>PRK07322 adenine phosphoribosyltransferase; Provisional

Probab=99.88  E-value=3e-21  Score=154.86  Aligned_cols=152  Identities=24%  Similarity=0.352  Sum_probs=117.3

Q ss_pred             eeeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCC--
Q 028297           43 SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL--  120 (211)
Q Consensus        43 ~~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~--  120 (211)
                      +.+..++|+..+..+.+..+++.+|.+.+.+++.+++.+.+ ++|+|++++.||+++|..+|..|++|+..++|.++.  
T Consensus        11 ~~~~~~~~~~~~~~~i~~~k~~~dp~l~~~~~~~La~~l~~-~~d~Iv~v~~gGiplA~~lA~~L~~p~~~~~k~~~~~~   89 (178)
T PRK07322         11 VTRELPLIRVGPDLAIALFVILGDTELTEAAAEALAKRLPT-EVDVLVTPETKGIPLAHALSRRLGKPYVVARKSRKPYM   89 (178)
T ss_pred             EEeecCeeEeCCCCEEEEEhhhCCHHHHHHHHHHHHHHcCC-CCCEEEEeccCCHHHHHHHHHHHCCCEEEEEEeCCCCC
Confidence            44557888887777889999999999999999999999976 789999999999999999999999999877665432  


Q ss_pred             CCceeeeeeeeecCce-eEEEecCC--cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297          121 PGEVISEAYVLEYGTD-RLEMHVGA--IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       121 ~~~~~~~~~~~~~~~~-~~~~~~~~--~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~  195 (211)
                      +.......+....+.. .+......  ..+|++||||||+++||+|+.+++++|+++||+.++++++++..++..+++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~aa~~~L~~~GA~~V~~~~v~~~~~~~~~~~  167 (178)
T PRK07322         90 QDPIIQEVVSITTGKPQLLVLDGADAEKLKGKRVAIVDDVVSTGGTLTALERLVERAGGQVVAKAAIFAEGDASNRLD  167 (178)
T ss_pred             CCceEEEEEEEEeccceEEEecCccccccCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEEEEcCCCCCCCc
Confidence            1111111111111111 22221111  248999999999999999999999999999999999999999988655654

>PRK06031 phosphoribosyltransferase; Provisional

Probab=99.82  E-value=4.5e-19  Score=147.57  Aligned_cols=150  Identities=21%  Similarity=0.370  Sum_probs=108.8

Q ss_pred             eeHHHHhcCH---HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCC-eEEeecCCCCCC-ceee---eee
Q 028297           58 QDITTLLLDH---KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAK-FVPLRKPNKLPG-EVIS---EAY  129 (211)
Q Consensus        58 ~d~~~l~~~~---~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p-~~~~~k~~~~~~-~~~~---~~~  129 (211)
                      ++++.++.++   ...+.+++.+++++...++|+|++++.+|+++|..+|..||++ +..+++.++... ....   .+.
T Consensus        54 ~~i~~ll~~~~~~~~~~~la~~La~~~~~~~~DvIVgv~~~Gi~lA~~lA~~Lg~~~~vpl~~~rK~~~~~~l~~~~~si  133 (233)
T PRK06031         54 RALASLIVNQASFEVLDALAEHLAEKARAFDPDVVAGLPTLGLTLAAAVARKLGHTRYVPLGTSRKFWYRDELSVPLSSI  133 (233)
T ss_pred             CchhhHhCChhHHHHHHHHHHHHHHHcccCCCcEEEEeccCCHHHHHHHHHHHCCCCceEEEEccccccccccccceeee
Confidence            5888888887   5556799999999877788999999999999999999999974 344443332211 0000   000


Q ss_pred             eeecCceeEEEecC--CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--C----CCeE
Q 028297          130 VLEYGTDRLEMHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--G----KPLY  200 (211)
Q Consensus       130 ~~~~~~~~~~~~~~--~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~----~~l~  200 (211)
                      ........+.+...  ...+|++||||||+++||+|+.+++++|+++|++++++++++.+++ ++++|.  +    .++.
T Consensus       134 tt~~~~~~~~l~~~~~~~~~GkrVLIVDDVitTG~Tl~aa~~lL~~~Ga~Vvgv~v~v~~g~~~~~~l~~~~~~~~~~~~  213 (233)
T PRK06031        134 TTPDQGKRLYIDPRMLPLLEGRRVALIDDVISSGASIVAGLRLLAACGIEPAGIGAAMLQSERWRESLAAAGPQWPARVV  213 (233)
T ss_pred             eccCccceEEecccccccCCCCEEEEEEeEccccHHHHHHHHHHHHcCCeEEEEEEEEEccccHHHHHHhcCCCcccceE
Confidence            00011123333221  2358999999999999999999999999999999999999999998 777775  2    4577


Q ss_pred             EEEcccc
Q 028297          201 ILVEPRL  207 (211)
Q Consensus       201 sl~~~~~  207 (211)
                      ++.+++-
T Consensus       214 ~~~~~p~  220 (233)
T PRK06031        214 GVFATPI  220 (233)
T ss_pred             EEeeccc
Confidence            7776653

>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate

Probab=99.82  E-value=1.2e-19  Score=136.30  Aligned_cols=122  Identities=26%  Similarity=0.402  Sum_probs=91.7

Q ss_pred             HHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEE
Q 028297           62 TLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLE  139 (211)
Q Consensus        62 ~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~  139 (211)
                      +++.+++..+.+++.+++++.+.  ++|.|+|++.||+++|..+|..|+.|+....+.........  ..........+.
T Consensus         2 ~i~~~~~~~~~~~~~la~~i~~~~~~~~~ivgi~~~G~~~a~~la~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   79 (125)
T PF00156_consen    2 KIILSPEQIEALAERLAEQIKESGFDFDVIVGIPRGGIPLAAALARALGIPLVFVRKRKSYYPGSD--KTSREKNNQELF   79 (125)
T ss_dssp             EEEEBHHHHHHHHHHHHHHHHHHTTTSSEEEEETTTTHHHHHHHHHHHTHEEEEEEEEEEEESEEE--EEEEETEEEEEE
T ss_pred             EEEEcHHHHHHHHHHHHHHHHHhCCCCCEEEeehhccHHHHHHHHHHhCCCccceeeeecccccch--hhhhccCceEEe
Confidence            45678899999999999999876  45779999999999999999999999877554321100000  001111111222


Q ss_pred             EecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEE
Q 028297          140 MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  185 (211)
Q Consensus       140 ~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~  185 (211)
                      .......+||+||||||+++||+|+.++++.|+++|++++++++++
T Consensus        80 ~~~~~~~~gk~vliVDDvi~tG~Tl~~~~~~L~~~g~~~v~~~vl~  125 (125)
T PF00156_consen   80 IIDKEDIKGKRVLIVDDVIDTGGTLKEAIELLKEAGAKVVGVAVLV  125 (125)
T ss_dssp             EEESSSGTTSEEEEEEEEESSSHHHHHHHHHHHHTTBSEEEEEEEE
T ss_pred             ecccccccceeEEEEeeeEcccHHHHHHHHHHHhCCCcEEEEEEEC
Confidence            2234446999999999999999999999999999999999999986

Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....

>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]

Probab=99.80  E-value=1.3e-18  Score=135.93  Aligned_cols=140  Identities=19%  Similarity=0.325  Sum_probs=110.8

Q ss_pred             eheeHHHHhcCHHHHHHHHHHHHHHH-hhc--CCcEEEEecCCccchHHHHHHHhCCCeEEee--cCCCCCCceeeeeee
Q 028297           56 MFQDITTLLLDHKAFKDTVDIFVDRY-RDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLR--KPNKLPGEVISEAYV  130 (211)
Q Consensus        56 ~~~d~~~l~~~~~~~~~~~~~la~~i-~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~--k~~~~~~~~~~~~~~  130 (211)
                      .+.+++.+-..+.-.+.++..+++.+ +..  ++|+|+++...|+|+|.++|..||..+...+  |.++..+.-      
T Consensus        54 i~i~W~siG~s~sRl~~Is~am~Dm~m~~~~~evDvVvGIa~sGvPlAtmvA~elg~elaiY~PrK~~~de~~~------  127 (203)
T COG0856          54 IKIDWRSIGKSGSRLRYISEAMADMIMEKVSFEVDVVVGIAISGVPLATMVAYELGKELAIYHPRKHRKDEGAG------  127 (203)
T ss_pred             eEEechhhccchHHHHHHHHHHHHHHHHhccceeEEEEEEeecCccHHHHHHHHhCCceEEEecccccccccCC------
Confidence            47899999888888888888888843 332  6799999999999999999999999997754  333221110      


Q ss_pred             eecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCCCeEEEEccc
Q 028297          131 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPR  206 (211)
Q Consensus       131 ~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~~l~sl~~~~  206 (211)
                         ..+.+.-.... ..||+|+||||++|||+|+.++++.|++.|++.+.+.+++++. |...++|+|+.||+.+.
T Consensus       128 ---~~G~iS~NFa~-V~gK~cvIVDDvittG~Ti~E~Ie~lke~g~kpv~v~VL~dK~-G~dei~gvPi~sLlri~  198 (203)
T COG0856         128 ---KGGSISSNFAS-VEGKRCVIVDDVITTGSTIKETIEQLKEEGGKPVLVVVLADKK-GVDEIEGVPVESLLRIL  198 (203)
T ss_pred             ---cCceeeccccc-ccCceEEEEecccccChhHHHHHHHHHHcCCCcEEEEEEEccC-CcccccCcchHHhheee
Confidence               01122211123 4999999999999999999999999999999999999999987 66789999999998753

>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only]

Probab=99.74  E-value=3.4e-18  Score=141.86  Aligned_cols=146  Identities=18%  Similarity=0.151  Sum_probs=101.2

Q ss_pred             eeeeeeeeecceeeeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhh--cCCcEEEEec-------CCccchHH
Q 028297           31 FFLFFCFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRD--MGISVVAGIE-------ARGFVFGP  101 (211)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~--~~~d~Iv~i~-------~gG~~~A~  101 (211)
                      ...+.++.|.+..++-+..           .+...+....+.++++++..+..  ..+|.||++|       .+||+++.
T Consensus        66 ~~~~~~~~Y~~~l~~~i~~-----------~Kf~~~~~l~~~la~~l~~~~~~~~~~~~~iVpVPls~~r~~~RGFNQ~~  134 (225)
T COG1040          66 ERLRSLGSYNGPLRELISQ-----------LKFQGDLDLAKLLARLLAKALDDFLEKPDLIVPVPLSPSRLLERGFNQSE  134 (225)
T ss_pred             eeEEEEEEccHHHHHHHHH-----------hhhCCchhHHHHHHHHHHHHHhhccccCCeEEEecCCHHHHHHcCCCHHH
Confidence            3344455555555553333           33345667778888888888872  3689999999       58999999


Q ss_pred             HHHHHhC----CCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297          102 SIALAIG----AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAE  177 (211)
Q Consensus       102 ~lA~~L~----~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~  177 (211)
                      .+|+.++    .|+...+++.+.++.......+..+.+++|.+.. .....++|+|||||+|||+|+.++++.|+++||+
T Consensus       135 ~la~~l~~~~~~~~~~~r~k~~~~q~~l~~~~rr~nl~~aF~~~~-~~~~~~~vlLvDDV~TTGaTl~~~~~~L~~~Ga~  213 (225)
T COG1040         135 LLARALARRLGKPIALRRVKDTSPQQGLKALERRRNLKGAFRLKK-GIEEPKNVLLVDDVYTTGATLKEAAKLLREAGAK  213 (225)
T ss_pred             HHHHHHHHHhCchHHHHHHhccccccccchHHHHHhccCCeecCC-CCCCCCeEEEEecccccHHHHHHHHHHHHHcCCc
Confidence            9988775    4443333333333333333344445566777643 3323399999999999999999999999999999


Q ss_pred             EEEEEEEEeCc
Q 028297          178 VVECACVVGLP  188 (211)
Q Consensus       178 ~V~v~~~~~~~  188 (211)
                      +|.+++++...
T Consensus       214 ~v~~~~lar~~  224 (225)
T COG1040         214 RVFVLTLARAP  224 (225)
T ss_pred             eEEEEEEEecC
Confidence            99999998653

>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism]

Probab=99.73  E-value=6.1e-18  Score=138.64  Aligned_cols=196  Identities=18%  Similarity=0.198  Sum_probs=135.1

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeee-e--------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLF-F--------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      +|||||+|+||+|+....     +|.+.|||+ |              ++||.-|++|. +-..|..|.-+.++.++..+
T Consensus        50 ~~svrgkdvfiiqt~skd-----vn~~vmellim~yackts~aksiigvipy~pyskqc-kmrkrgsiv~klla~mmcka  123 (354)
T KOG1503|consen   50 KESVRGKDVFIIQTGSKD-----VNNDVMELLIMAYACKTSCAKSIIGVIPYLPYSKQC-KMRKRGSIVSKLLASMMCKA  123 (354)
T ss_pred             hhhccCceEEEEEecCcc-----cchHHHHHHHHHHHHhhhhhhceEEEeecCccchhh-hhhhcccHHHHHHHHHHHhc
Confidence            589999999999998754     999999984 3              57777777773 33345556666667766666


Q ss_pred             HHHH-HHHHHHHHHHhh---------------------c----CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297           68 KAFK-DTVDIFVDRYRD---------------------M----GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP  121 (211)
Q Consensus        68 ~~~~-~~~~~la~~i~~---------------------~----~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~  121 (211)
                      ++.+ ..++++.+.+++                     .    ..-+||+-..|-.+.|...|++|.+.++.++-+.+..
T Consensus       124 glthlitmdlhqkeiqgff~~pvdnlraspfllqyiqe~ipdyrnavivaksp~~akka~syaerlrlglavihge~k~~  203 (354)
T KOG1503|consen  124 GLTHLITMDLHQKEIQGFFSIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPGVAKKAQSYAERLRLGLAVIHGEQKDT  203 (354)
T ss_pred             ccceEEeehhhhHhhcceecccccccccCHHHHHHHHHhCccccceEEEecCcchhhHHHhHHHHHhhceeEeecccccc
Confidence            6555 444555444332                     1    2246777777788899999999988877765322110


Q ss_pred             -----------Cceeeeee--eee------cCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEE
Q 028297          122 -----------GEVISEAY--VLE------YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECA  182 (211)
Q Consensus       122 -----------~~~~~~~~--~~~------~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~  182 (211)
                                 -.+...+.  ..+      ..+..+.+ .|++ .|+-.++|||+++.-.+-.+|++.|++.||-++++.
T Consensus       204 e~d~~dgr~spp~~~~~t~~~~~~lp~~~~k~kppltv-vgdv-ggriaimvddiiddvqsfvaaae~lkergaykiyv~  281 (354)
T KOG1503|consen  204 ESDLVDGRHSPPPVVTATTHPSLELPAQISKEKPPLTV-VGDV-GGRIAIMVDDIIDDVQSFVAAAEVLKERGAYKIYVM  281 (354)
T ss_pred             ccccccCCcCCCCccccccCccccCchhhcccCCCeEE-Eecc-CceEEEEehhhHHhHHHHHHHHHHHHhcCceEEEEE
Confidence                       00000000  000      01112332 2444 899999999999999999999999999999999999


Q ss_pred             EEEeCch--hhcccCCCCeEEEEccc
Q 028297          183 CVVGLPE--GQRRLDGKPLYILVEPR  206 (211)
Q Consensus       183 ~~~~~~~--~~~~l~~~~l~sl~~~~  206 (211)
                      ++|+..+  +-..|+.+|+.+++.-+
T Consensus       282 athgllssdapr~lees~idevvvtn  307 (354)
T KOG1503|consen  282 ATHGLLSSDAPRLLEESPIDEVVVTN  307 (354)
T ss_pred             eecccccccchhhhhcCCCceEEEec
Confidence            9999987  66667899998887544

>TIGR00201 comF comF family protein

Probab=99.72  E-value=1.4e-17  Score=134.89  Aligned_cols=120  Identities=17%  Similarity=0.213  Sum_probs=83.0

Q ss_pred             cCHHHHHHHHHHHHHHHhhc---CCcEEEEec-------CCccchHHHHHHHhCCC---eE-EeecCCCCCCceeeeeee
Q 028297           65 LDHKAFKDTVDIFVDRYRDM---GISVVAGIE-------ARGFVFGPSIALAIGAK---FV-PLRKPNKLPGEVISEAYV  130 (211)
Q Consensus        65 ~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~-------~gG~~~A~~lA~~L~~p---~~-~~~k~~~~~~~~~~~~~~  130 (211)
                      .+..+.+.+++.++..+...   .+|.|+++|       .+||+++..+|+.+...   +. .+.+.+..++...+...+
T Consensus        56 ~~~~l~~~l~~~l~~~~~~~~~~~~~~ivpVP~~~~r~~~RGfnq~~~la~~l~~~~~~~~~~l~r~~~~~Q~~l~~~~R  135 (190)
T TIGR00201        56 GQAEIIRALASLLSLTVSKAYRDLPDVIVPVPLSKEREWRRGFNQADLLAQCLSRWLFNYHNIVIRLNNETQSKLKATLR  135 (190)
T ss_pred             CChHHHHHHHHHHHHHHHhhccCCCCEEEeCCCCHHHHHHhCCCHHHHHHHHHHHHhCCCcceEEEecccccccCCHHHH
Confidence            35566677777777665432   358999999       49999888888766422   11 122222233333333333


Q ss_pred             eecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEE
Q 028297          131 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  185 (211)
Q Consensus       131 ~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~  185 (211)
                      ..+.++.|.+... ..+|++|||||||+|||+|+.++++.|+++||++|++++++
T Consensus       136 ~~n~~~~f~~~~~-~~~~~~vllvDDV~TTGaTl~~~~~~L~~~Ga~~V~~~~la  189 (190)
T TIGR00201       136 FLNLENAFDLKNN-SFQGRNIVLVDDVVTTGATLHEIARLLLELGAASVQVWTLA  189 (190)
T ss_pred             HHHHhCcEEccCC-CCCCCEEEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEEEE
Confidence            3344556765433 34899999999999999999999999999999999999986

This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis.

>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional

Probab=99.71  E-value=2.8e-16  Score=126.41  Aligned_cols=119  Identities=19%  Similarity=0.193  Sum_probs=84.5

Q ss_pred             cCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeE--EeecCCCCCCceeeeeeeeecCceeEE
Q 028297           65 LDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDRLE  139 (211)
Q Consensus        65 ~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~~~  139 (211)
                      .+.+......+.++.++.+.   +.++|++++.||+.+|..+|+.|++|+.  .+++.+.......        ..-.+.
T Consensus        17 ~s~~~i~~~i~~la~~i~~~~~~~~~viV~i~~gg~~~A~~La~~l~~~~~~~~l~~~~~~~~~~~--------~~~~~~   88 (181)
T PRK09162         17 VSAAEVEAAIDRMADEITADLADENPLVLCVMGGGLVFTGQLLPRLDFPLEFDYLHATRYRNETTG--------GELVWK   88 (181)
T ss_pred             ecHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHHcCCCcccCEEEEEecCCCccC--------CceeEe
Confidence            34455555666666666542   3479999999999999999999999863  2333222111100        000122


Q ss_pred             EecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          140 MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       140 ~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                      ......++||+|||||||+|||+|+.++++.|+++||+.|++++++++...+
T Consensus        89 ~~~~~~v~gk~VLIVDDIidTG~Tl~~~~~~Lk~~Ga~~V~~avL~~k~~~~  140 (181)
T PRK09162         89 VKPRESLKGRTVLVVDDILDEGHTLAAIRDRCLEMGAAEVYSAVLVDKTHDR  140 (181)
T ss_pred             cCCCCCCCCCEEEEEccccCcHHHHHHHHHHHHhCCCCEEEEEEEEEcCccc
Confidence            2122235999999999999999999999999999999999999999997543

>PRK08525 amidophosphoribosyltransferase; Provisional

Probab=99.70  E-value=1e-16  Score=145.11  Aligned_cols=137  Identities=18%  Similarity=0.182  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCe--EEeecCCCCCCceeeeeeeeecCceeEEEec-CC
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYGTDRLEMHV-GA  144 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~--~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  144 (211)
                      .....+++.|++.+.. +.|.|+++|.+|+++|..+|+.||+|+  ..++|++. .........+.++.+.++.+.. ..
T Consensus       259 ~~R~~~G~~La~~~~~-~~d~Vv~vPd~g~~~A~~~A~~lgip~~~~l~rk~~~-~r~~i~~~qr~rn~~~~~~~~~~~~  336 (445)
T PRK08525        259 EVRKKMGEELAKKFPI-KADFVVPVPDSGVPAAIGYAQESGIPFEMAIVRNHYV-GRTFIEPTQEMRNLKVKLKLNPMSK  336 (445)
T ss_pred             HHHHHHHHHHHHHhcc-cCCeEEECCchHHHHHHHHHHHhCCCccceEEEeecc-ccccCCHHHHHHhhheeEEeccccc
Confidence            4455888888887753 678999999999999999999999998  34554421 1111111111122222343322 23


Q ss_pred             cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEEccc
Q 028297          145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR  206 (211)
Q Consensus       145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~~~~  206 (211)
                      .++||+||||||++|||+|+.++++.|+++||++|+++++|....  +...++..++..|+.-+
T Consensus       337 ~v~gK~VlLVDDvitTG~Tl~~a~~~Lr~aGA~~V~v~~~hp~~~~~~~~~i~~~~~~~li~~~  400 (445)
T PRK08525        337 VLEGKRIVVIDDSIVRGTTSKKIVSLLRAAGAKEIHLRIACPEIKFPCYYGIDTPTFEELISAN  400 (445)
T ss_pred             ccCCCeEEEEecccCcHHHHHHHHHHHHhcCCCEEEEEEECCCcCCchhhhCcCCChhhEEEcC
Confidence            358999999999999999999999999999999999999999876  66677666677776544

>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase

Probab=99.70  E-value=4.1e-16  Score=123.83  Aligned_cols=119  Identities=15%  Similarity=0.182  Sum_probs=84.1

Q ss_pred             CHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCceeEEE
Q 028297           66 DHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTDRLEM  140 (211)
Q Consensus        66 ~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~~~~  140 (211)
                      +++..+...+.+|.++.+.   +.++|++|.+||+.+|..+++.|++|...  +.-........       ..+......
T Consensus         4 s~~~i~~~i~~lA~~I~~~~~~~~~vvv~i~~GG~~~a~~l~~~L~~~~~v~~i~~~~Y~~~~~-------~~~~~~~~~   76 (166)
T TIGR01203         4 PEEQIKARIAELAKQITEDYAGKPLVLLCVLKGSFPFFADLIRYIAVPVQVDFMAVSSYGNGMQ-------SSGDVKILK   76 (166)
T ss_pred             CHHHHHHHHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHhcCCCceeeEEEEeeccCCCc-------ccCceEEec
Confidence            4455666667777776543   45799999999999999999999987532  32111000000       000001111


Q ss_pred             ecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          141 HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       141 ~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                      ......+||+|||||||++||+|+.++++.|++.|++.+.++|++.++.++
T Consensus        77 ~~~~~~~gk~vlivDDii~TG~Tl~~~~~~l~~~g~~~i~~~~l~~k~~~~  127 (166)
T TIGR01203        77 DLDLSIKGKDVLIVEDIVDTGLTLQYLLDLLKARKPKSLKIVTLLDKPSRR  127 (166)
T ss_pred             CCCCCCCCCEEEEEeeeeCcHHHHHHHHHHHHHCCCCEEEEEEEEecCccC
Confidence            122335899999999999999999999999999999999999999998643

Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.

>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A

Probab=99.69  E-value=8.6e-17  Score=128.33  Aligned_cols=119  Identities=23%  Similarity=0.329  Sum_probs=81.7

Q ss_pred             cEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCc-----------e----eeeee--eee--cCceeEEEecCCcCC
Q 028297           87 SVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGE-----------V----ISEAY--VLE--YGTDRLEMHVGAIEP  147 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~-----------~----~~~~~--~~~--~~~~~~~~~~~~~~~  147 (211)
                      -+||+++.||...|..+|++|++.+..+++.++....           .    .....  ...  ..+..+.+ .|++ +
T Consensus         5 aVIVa~~~g~akRAts~Ad~L~l~~avih~e~~~~~~~~~~~~~s~p~~~~~~~~~~~~~~~~~~~e~~~~~v-VGDV-~   82 (184)
T PF14572_consen    5 AVIVAKDPGGAKRATSFADRLRLGFAVIHGERRDSESDGVDGRHSPPMSRSAAVSSSEEIPEMTPKEKPPMNV-VGDV-K   82 (184)
T ss_dssp             EEEEESSGGGHHHHHHHHHHCT-EEEEE------------------------------------------EEE-ES---T
T ss_pred             CEEEeCCCCchHhHHHHHHHhCCCeeEecCccccccccccccccCCCccccccccccchhhhcccCcccceEE-EEEc-c
Confidence            4899999999999999999999999887755432100           0    00000  000  00112332 3665 9


Q ss_pred             CCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEEcccc
Q 028297          148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  207 (211)
Q Consensus       148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~~~~~  207 (211)
                      ||.++||||+++||+|+.++++.|++.||+.|+++++|+.++  +.++|++.++..++.-+-
T Consensus        83 gk~~IIvDDiIdtg~Tl~~aA~~Lk~~GA~~V~~~aTHgvfs~~A~~~l~~s~Id~vvvTnT  144 (184)
T PF14572_consen   83 GKICIIVDDIIDTGGTLIKAAELLKERGAKKVYACATHGVFSGDAPERLEESPIDEVVVTNT  144 (184)
T ss_dssp             TSEEEEEEEEESSTHHHHHHHHHHHHTTESEEEEEEEEE---TTHHHHHHHSSESEEEEETT
T ss_pred             CCeEeeecccccchHHHHHHHHHHHHcCCCEEEEEEeCcccCchHHHHHhhcCCeEEEEecc
Confidence            999999999999999999999999999999999999999998  888899889999886543

...

>PRK11595 DNA utilization protein GntX; Provisional

Probab=99.68  E-value=3.1e-16  Score=130.39  Aligned_cols=122  Identities=16%  Similarity=0.238  Sum_probs=82.6

Q ss_pred             hcCHHHHHHHHHHHHHHHhh-------cCCcEEEEec-------CCccchHHHHHH----HhCCCeEE--eec-CCCCCC
Q 028297           64 LLDHKAFKDTVDIFVDRYRD-------MGISVVAGIE-------ARGFVFGPSIAL----AIGAKFVP--LRK-PNKLPG  122 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~-------~~~d~Iv~i~-------~gG~~~A~~lA~----~L~~p~~~--~~k-~~~~~~  122 (211)
                      ..+..+.+.+++.+++.+..       ..+|.|+++|       .|||+++..+|+    .+++|+..  +.+ +...++
T Consensus        84 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~d~ivpVPl~~~r~~~RGfnq~~~la~~la~~~~~~~~~~~l~r~~~~~~q  163 (227)
T PRK11595         84 SRRSELASVLARLLLLEWLQARRSTGLQKPDRIISVPLHQRRHWRRGFNQSDLLCRPLARWLGCDYDSEALTRTRATATQ  163 (227)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhhcccCCCeEEecCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCcccceEEecCCCCc
Confidence            34556666777776654321       1468999998       369998766665    56787632  222 222233


Q ss_pred             ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeC
Q 028297          123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  187 (211)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~  187 (211)
                      ...+...+..+.++.|.+. +. .+|++|||||||+|||+|+.++++.|+++|+++|++++++..
T Consensus       164 ~~l~~~~R~~n~~~~f~~~-~~-~~~~~vllvDDv~tTG~Tl~~~~~~L~~~g~~~V~~~~la~~  226 (227)
T PRK11595        164 HFLSARLRKRNLKNAFRLE-LP-VQGQHMAIVDDVVTTGSTVAEIAQLLLRNGAASVQVWCLCRT  226 (227)
T ss_pred             ccCCHHHHhhhhhhhhccC-CC-CCCCEEEEEeeeecchHHHHHHHHHHHHcCCcEEEEEEEEec
Confidence            3233233333334455542 33 489999999999999999999999999999999999999753

>PLN02238 hypoxanthine phosphoribosyltransferase

Probab=99.67  E-value=2.6e-15  Score=121.58  Aligned_cols=135  Identities=21%  Similarity=0.243  Sum_probs=93.7

Q ss_pred             hcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCC---CeE--EeecCCCCCCceeeeeeeeecCc
Q 028297           64 LLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGA---KFV--PLRKPNKLPGEVISEAYVLEYGT  135 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~---p~~--~~~k~~~~~~~~~~~~~~~~~~~  135 (211)
                      +-+++..+...+.+|.++.+.   ..++|+|+..||+++|..+++.|+.   |+.  .++..+...+..         .+
T Consensus        11 lis~~~I~~~i~~lA~~I~~~~~~~~~vivgi~~Gg~~fa~~L~~~L~~~~~~~~i~fi~~~sy~~~~~---------~~   81 (189)
T PLN02238         11 LWTAEDISARVAELAAQIASDYAGKSPVVLGVATGAFMFLADLVRAIQPLPRGLTVDFIRASSYGGGTE---------SS   81 (189)
T ss_pred             EcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEEccCCHHHHHHHHHHhCccCCCeEEEEEEeeecCCCcc---------cc
Confidence            445555666666677777553   3589999999999999999999998   663  244322111110         01


Q ss_pred             eeEEEec---CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhc----ccCCCCeEEEEcccc
Q 028297          136 DRLEMHV---GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQR----RLDGKPLYILVEPRL  207 (211)
Q Consensus       136 ~~~~~~~---~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~----~l~~~~l~sl~~~~~  207 (211)
                      +...+..   ....+||+|||||||+|||.|+.++++.|++.|++++.++|+++++..++    ..++.|=+.-+++++
T Consensus        82 g~~~i~~~~~~~~v~gk~VliVDDIidTG~Tl~~~~~~l~~~g~~~v~~avL~dK~~~r~~~~~~~~~~~d~~G~~ipd  160 (189)
T PLN02238         82 GVAKVSGADLKIDVKGKHVLLVEDIVDTGNTLSALVAHLEAKGAASVSVCALLDKRARRKVKYELVGDGKEYVGFECPD  160 (189)
T ss_pred             CceeEecCCCCCCCCCCEEEEEecccchHHHHHHHHHHHHhCCCCEEEEEEEEECCccccCCccCCCCCceEEEEecCC
Confidence            1122211   22359999999999999999999999999999999999999999986322    122446666666554

>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional

Probab=99.62  E-value=6.4e-15  Score=118.16  Aligned_cols=118  Identities=14%  Similarity=0.234  Sum_probs=84.8

Q ss_pred             cCHHHHHHHHHHHHHHHhhc-----CCcEEEEecCCccchHHHHHHHhCCCeE--EeecCCCCCCceeeeeeeeecCcee
Q 028297           65 LDHKAFKDTVDIFVDRYRDM-----GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDR  137 (211)
Q Consensus        65 ~~~~~~~~~~~~la~~i~~~-----~~d~Iv~i~~gG~~~A~~lA~~L~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~  137 (211)
                      -+.+..+...+.+|.++.+.     ...+++||..||+.+|..|++.|+.|..  .++..+...+...         .+.
T Consensus         9 ~~~~~i~~~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L~~~L~~~~~v~~l~~ssY~~~~~~---------~~~   79 (178)
T PRK15423          9 IPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMST---------TRD   79 (178)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHHHHHhCCCcceeEEEEEEecCCCcc---------cCc
Confidence            34455555566666666432     2369999999999999999999999853  4443322111100         111


Q ss_pred             EEEe--cCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          138 LEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       138 ~~~~--~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                      ..+.  .....+||+|||||||++||.||.++.+.|++.|++++.++++++++.++
T Consensus        80 v~i~~~~~~~v~gk~VLlVDDIiDTG~TL~~l~~~l~~~~~~~v~~avL~~K~~~r  135 (178)
T PRK15423         80 VKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRR  135 (178)
T ss_pred             eEEecCCCCCCCCCEEEEEeeecCchHHHHHHHHHHHhCCCCEEEEEEEEECCCCC
Confidence            2222  12235999999999999999999999999999999999999999998643

>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated

Probab=99.61  E-value=1.3e-14  Score=114.01  Aligned_cols=114  Identities=23%  Similarity=0.308  Sum_probs=83.6

Q ss_pred             cCHHHHHHHHHHHHHHHhhc-CCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCceeeeeeeeecCceeEEEec
Q 028297           65 LDHKAFKDTVDIFVDRYRDM-GISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMHV  142 (211)
Q Consensus        65 ~~~~~~~~~~~~la~~i~~~-~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (211)
                      -+.+.....++.++.++.+. ++|+|+|+++||+.+|..++++|++|+.. ++-.          +|..+ .++.+.+..
T Consensus        10 is~~~i~~~i~~la~~I~~~~~~d~vvgv~~GG~~fa~~L~~~L~~~~v~~i~~s----------sY~~~-~~~~~~~~~   78 (156)
T PRK09177         10 VSWDQLHRDARALAWRLLPAGQWKGIIAVTRGGLVPAAILARELGIRLVDTVCIS----------SYDHD-NQGELKVLK   78 (156)
T ss_pred             cCHHHHHHHHHHHHHHHHhhCCCCEEEEEecCCeehHHHHHHHcCCCceeEEEEE----------EECCC-cCCcEEEec
Confidence            45566677888888888765 47999999999999999999999999642 2110          11100 112233333


Q ss_pred             CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhccc
Q 028297          143 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL  194 (211)
Q Consensus       143 ~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l  194 (211)
                      +...+|++||||||+++||.|+.++.+.+++     +.+++++.++.++.+.
T Consensus        79 ~~~~~gk~VLIVDDIiDTG~Tl~~v~~~l~~-----v~~a~l~~K~~~~~~~  125 (156)
T PRK09177         79 RAEGDGEGFLVVDDLVDTGGTARAVREMYPK-----AHFATVYAKPAGRPLV  125 (156)
T ss_pred             CCCcCcCEEEEEeeeeCCHHHHHHHHHHHhh-----CCEEEEEECcCCCCCC
Confidence            3346999999999999999999999999974     6788899888654443

>PRK05793 amidophosphoribosyltransferase; Provisional

Probab=99.59  E-value=8.3e-15  Score=133.39  Aligned_cols=135  Identities=19%  Similarity=0.177  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCceeeeeeeeecCceeEEEe-cCCcCC
Q 028297           70 FKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMH-VGAIEP  147 (211)
Q Consensus        70 ~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  147 (211)
                      ...+++.|++.+.. +.|+|+++|.+|.++|..+|+.+|+|+.. +.+.+.........+...+....++... .....+
T Consensus       274 R~~~G~~La~~~~~-~~D~Vv~vPdsg~~~A~~~A~~lgip~~~~l~r~~~~~rtfi~~~q~~R~~~~~~k~~~~~~~v~  352 (469)
T PRK05793        274 RVRAGRQLYKEYPV-DADIVIGVPDSGIPAAIGYAEASGIPYGIGFIKNKYVGRTFIAPSQELRERAVRVKLNPLKVNVE  352 (469)
T ss_pred             HHHHHHHHHHhcCC-CCCEEEEcCccHHHHHHHHHHHhCCCEeeeEEEeeeccccccChhHhhhhhhheEecccCccccC
Confidence            34778888877643 67899999999999999999999999965 2222211000010000000001122211 112358


Q ss_pred             CCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEEcc
Q 028297          148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEP  205 (211)
Q Consensus       148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~~~  205 (211)
                      ||+||||||+++||+|+.++++.|+++||++|++++.|....  ....++-.+..+|+..
T Consensus       353 gk~VlLVDD~ItTGtTl~~~~~~Lr~aGAk~V~~~~~~p~~~~p~~~gid~~~~~elia~  412 (469)
T PRK05793        353 GKRVVLIDDSIVRGTTSKRLVELLRKAGAKEVHFRVSSPPVKYPCYFGIDTPYRKELIGA  412 (469)
T ss_pred             CCEEEEEccccCchHHHHHHHHHHHHcCCCEEEEEEECCCcCcchhhhccCCChhhEEEc
Confidence            999999999999999999999999999999999999998765  4444444445555543

>PRK09246 amidophosphoribosyltransferase; Provisional

Probab=99.58  E-value=6.4e-15  Score=135.14  Aligned_cols=119  Identities=18%  Similarity=0.160  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCC-ceeeeeeeeecCceeEEEecC
Q 028297           67 HKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPG-EVISEAYVLEYGTDRLEMHVG  143 (211)
Q Consensus        67 ~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~-~~~~~~~~~~~~~~~~~~~~~  143 (211)
                      ..+.+.+++.+...+...+.|+|+++|.+|..+|..+|+.+++|+..  ++++..... ....+..+..+.+.+|.... 
T Consensus       275 ~~lg~~LA~~l~~~~~~~~~D~VvpVP~s~~~~A~~la~~lgip~~~~l~k~~~~~rt~i~~~q~~R~~~vr~~f~~~~-  353 (501)
T PRK09246        275 LRMGEKLAEKIKREWPDLDIDVVIPIPDTSRDAALEIARILGVPYREGFVKNRYVGRTFIMPGQAQRKKSVRQKLNAIR-  353 (501)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcEEEEeCccHHHHHHHHHHHHCCCccceEEEEecccccccCcCHHHHHHHHHhhcCCcc-
Confidence            34445555555444443357999999999999999999999999853  332221111 00111111112223443222 


Q ss_pred             CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEe
Q 028297          144 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  186 (211)
Q Consensus       144 ~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~  186 (211)
                      ...+||+||||||++|||+|+.++++.|+++||+.|++++++.
T Consensus       354 ~~v~gK~VlLVDDvitTGaTl~~~~~~L~~aGA~~V~v~v~ap  396 (501)
T PRK09246        354 AEFKGKNVLLVDDSIVRGTTSEQIVQMAREAGAKKVYFASAAP  396 (501)
T ss_pred             ccccCCeEEEEeccccccHHHHHHHHHHHHcCCCEEEEEEEcc
Confidence            2358999999999999999999999999999999999999964

>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional

Probab=99.58  E-value=3.1e-14  Score=114.00  Aligned_cols=119  Identities=21%  Similarity=0.250  Sum_probs=82.5

Q ss_pred             hcCHHHHHHHHHHHHHHHhhc----CCcEEEEecCCccchHHHHHHHh----CCC--eEEeecCCCCCCceeeeeeeeec
Q 028297           64 LLDHKAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAI----GAK--FVPLRKPNKLPGEVISEAYVLEY  133 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~~----~~d~Iv~i~~gG~~~A~~lA~~L----~~p--~~~~~k~~~~~~~~~~~~~~~~~  133 (211)
                      +-+++..+...+.++.++.+.    ..++|+|+..||+++|..+++.|    +.|  +..++......+...      ..
T Consensus         6 l~s~~~i~~~i~~la~~i~~~~~~~~~~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~~~------~~   79 (176)
T PRK05205          6 ILDAEALRRALTRIAHEIIERNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTK------KG   79 (176)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCccc------cC
Confidence            346677777788888887653    36899999999999999999999    544  333322110000000      00


Q ss_pred             CceeEE-EecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEEEEEEEEeCc
Q 028297          134 GTDRLE-MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP  188 (211)
Q Consensus       134 ~~~~~~-~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V~v~~~~~~~  188 (211)
                      ...... .......+|++|||||||++||+|+.++++.|++.| ++.+.+++++++.
T Consensus        80 ~~~~~~~~~l~~~v~gr~VLIVDDIidTG~Tl~~~~~~L~~~G~~~~v~~avL~~K~  136 (176)
T PRK05205         80 LHPQVKPTDIPFDIEGKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVLVDRG  136 (176)
T ss_pred             cccccccccCCCCCCCCEEEEEecccCcHHHHHHHHHHHHhcCCCcEEEEEEEEECC
Confidence            000110 011222589999999999999999999999999999 7899999999874

>TIGR01134 purF amidophosphoribosyltransferase

Probab=99.57  E-value=3.9e-15  Score=134.69  Aligned_cols=140  Identities=19%  Similarity=0.189  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCcee---eeeeeeecCceeEEEecC
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVI---SEAYVLEYGTDRLEMHVG  143 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~~---~~~~~~~~~~~~~~~~~~  143 (211)
                      .....+++.||+... .++|+|+++|.+|+++|..+|+.+|+|+.. +.|.+. .+.+.   .+..+....+..+.... 
T Consensus       257 ~~R~~~g~~La~~~~-~~~D~Vv~VP~sg~~~A~~la~~lgip~~~~l~r~~~-~~r~~i~~~q~~R~~~v~~k~~~~~-  333 (442)
T TIGR01134       257 KARKRMGEKLARESP-VEADVVIPVPDSGRSAALGFAQASGIPYREGLIKNRY-VGRTFIMPTQELRELSVRLKLNPIR-  333 (442)
T ss_pred             HHHHHHHHHHHHhcC-CCCEEEEEccCCHHHHHHHHHHHhCCCchHHeEEecc-ccccccCCCHHHHHHHHhhhccccc-
Confidence            334478888887643 368999999999999999999999999864 333221 11111   00011111122332222 


Q ss_pred             CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEE-----------EeCchhhccc---------C---CCCeE
Q 028297          144 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV-----------VGLPEGQRRL---------D---GKPLY  200 (211)
Q Consensus       144 ~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~-----------~~~~~~~~~l---------~---~~~l~  200 (211)
                      ...+||+||||||++|||+|+.+++++|+++||++|++.+.           .+.++-.|.+         .   |.+.-
T Consensus       334 ~~~~gk~v~lvDD~ittG~T~~~~~~~l~~~ga~~v~~~~~spp~~~pc~yg~d~~~~~el~~~~~~~~~i~~~~~~~~l  413 (442)
T TIGR01134       334 EVFRGKRVVLVDDSIVRGTTSRQIVKMLRDAGAKEVHVRIASPPIRYPCYYGIDMPTREELIANGRTVEEIAKEIGADSL  413 (442)
T ss_pred             ccCCCCEEEEEeccccccHHHHHHHHHHHHcCCcEEEEEEccCCccCCcccccCCCCHHHHhhcCCCHHHHHHHhCCCEE
Confidence            23589999999999999999999999999999999998776           4444311111         1   66777


Q ss_pred             EEEccccccc
Q 028297          201 ILVEPRLSVN  210 (211)
Q Consensus       201 sl~~~~~~~~  210 (211)
                      +.++++++.+
T Consensus       414 ~~~~~~~l~~  423 (442)
T TIGR01134       414 AYLSLEGLKE  423 (442)
T ss_pred             EEecHHHHHH
Confidence            7777777654

Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.

>PRK07272 amidophosphoribosyltransferase; Provisional

Probab=99.57  E-value=3.5e-15  Score=135.88  Aligned_cols=138  Identities=16%  Similarity=0.208  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCce--eeeeeeeecCceeEEEecCCcCC
Q 028297           71 KDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEV--ISEAYVLEYGTDRLEMHVGAIEP  147 (211)
Q Consensus        71 ~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  147 (211)
                      ..+++.|++.+.. +.|+|+++|..|..+|..+|+.+|+|+.. +.|.+......  ..+..+..+.+..|.... ...+
T Consensus       272 ~~lg~~La~~~~~-~~D~VvpVPnqa~~lA~~la~~lgip~~~~lvk~~~~~rt~~~~~q~~R~~~vr~~f~~~~-~~~~  349 (484)
T PRK07272        272 KRMGKRLAQEFPH-DADIVIGVPNSSLSAASGYAEESGLPYEMGLVKNQYVARTFIQPTQELREQGVRMKLSAVS-GVVK  349 (484)
T ss_pred             HHHHHHHHhhcCC-CCCEEEEecHHHHHHHHHHHHHHCCCcccCeEEEccCCccccCCCHHHHHHHHhhCccccc-cccC
Confidence            4777777766543 57999999999999999999999999843 22222111111  111112222233454322 3459


Q ss_pred             CCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEE-----------EeCchhh---------cccC---CCCeEEEEc
Q 028297          148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV-----------VGLPEGQ---------RRLD---GKPLYILVE  204 (211)
Q Consensus       148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~-----------~~~~~~~---------~~l~---~~~l~sl~~  204 (211)
                      ||+|+||||++|||+|+.+++++|+++||+.|++++.           .+.++-.         +.+.   |.+.-+.++
T Consensus       350 gk~vllVDDvittG~T~~~~~~~L~~~Ga~~v~~~~~~p~~~~~c~ygid~~~~~~lia~~~~~~ei~~~~~~dsl~~~~  429 (484)
T PRK07272        350 GKRVVMVDDSIVRGTTSRRIVQLLKEAGAKEVHVAIASPELKYPCFYGIDIQTRRELISANHSVEEICDIIGADSLTYLS  429 (484)
T ss_pred             CCEEEEEccccCchHHHHHHHHHHHhcCCcEEEEEEeCCccccChhhhccCcCHHHHHhcCCCHHHHHHHhCCCEEEEec
Confidence            9999999999999999999999999999999999999           4444311         1111   677777777


Q ss_pred             cccccc
Q 028297          205 PRLSVN  210 (211)
Q Consensus       205 ~~~~~~  210 (211)
                      ++++.+
T Consensus       430 ~~~l~~  435 (484)
T PRK07272        430 VDGLIE  435 (484)
T ss_pred             HHHHHH
Confidence            777665

>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional

Probab=99.55  E-value=9.6e-14  Score=113.94  Aligned_cols=120  Identities=13%  Similarity=0.171  Sum_probs=84.8

Q ss_pred             HHhcCHHHHHHHHHHHHHHHhhc---------CCcEEEEecCCccchHHHHHHHhC---CCeEE--eecCCCCCCceeee
Q 028297           62 TLLLDHKAFKDTVDIFVDRYRDM---------GISVVAGIEARGFVFGPSIALAIG---AKFVP--LRKPNKLPGEVISE  127 (211)
Q Consensus        62 ~l~~~~~~~~~~~~~la~~i~~~---------~~d~Iv~i~~gG~~~A~~lA~~L~---~p~~~--~~k~~~~~~~~~~~  127 (211)
                      ..+-+++..+...+.+|.+|.+.         ++++|+|+..||+.+|..|++.|+   .|+..  ++-.....+.    
T Consensus        25 ~~lis~e~I~~~i~~LA~~I~~~~~~~~~~~~~~~vivgVlkGg~~fa~dL~r~L~~~~~~~~vdfi~vssY~~~~----  100 (211)
T PTZ00271         25 HTLVTQEQVWAATAKCAKKIAEDYRSFKLTTENPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGTGV----  100 (211)
T ss_pred             cEecCHHHHHHHHHHHHHHHHHHhhhccccCCCCeEEEEEcCCCHHHHHHHHHHhcccCCCeeEEEEEEEecCCCC----
Confidence            34456666666666777666542         256899999999999999999996   56422  2211110010    


Q ss_pred             eeeeecCceeEEEe--cCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297          128 AYVLEYGTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG  190 (211)
Q Consensus       128 ~~~~~~~~~~~~~~--~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~  190 (211)
                           ..++.+.+.  ....++||+|||||||++||.||.++.+.|++.|++.+.++++++++..
T Consensus       101 -----~s~g~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL~~v~~~l~~~~p~svk~avL~dK~~~  160 (211)
T PTZ00271        101 -----ETSGQVRMLLDVRDSVENRHILIVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSG  160 (211)
T ss_pred             -----cccCceEEecCCCCCCCCCEEEEEecccCCHHHHHHHHHHHHhcCCCEEEEEEEEEcccC
Confidence                 011122221  1223589999999999999999999999999999999999999999764

>PLN02440 amidophosphoribosyltransferase

Probab=99.54  E-value=3.1e-14  Score=129.96  Aligned_cols=115  Identities=22%  Similarity=0.251  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCceeEEEec-CCcC
Q 028297           70 FKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTDRLEMHV-GAIE  146 (211)
Q Consensus        70 ~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  146 (211)
                      ...+++.|++.+.. ++|+|+++|.+|+.+|..+|+.+++|+..  +|.+.. ................++.... ....
T Consensus       261 r~~~g~~La~~~~~-~~d~vvpVP~s~~~~A~~la~~lgiP~~~~lvr~ry~-~rt~i~~~q~~r~~~~~~k~~~~~~~v  338 (479)
T PLN02440        261 RLEFGEILATEIPV-DCDVVIPVPDSGRVAALGYAAKLGVPFQQGLIRSHYV-GRTFIEPSQKIRDFSVKLKLNPVRSVL  338 (479)
T ss_pred             HHHHHHHHHHhcCC-CCCEEEEeCCcHHHHHHHHHHHhCCCchhheEEEeec-cccccCcchhhhhhhheeeeecccccc
Confidence            34677777776643 68999999999999999999999999853  332221 1111101111111111222211 1235


Q ss_pred             CCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEe
Q 028297          147 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  186 (211)
Q Consensus       147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~  186 (211)
                      +||+||||||++|||+|+.++++.|+++||++|+++++..
T Consensus       339 ~gk~VlLVDDiittGtTl~~i~~~L~~aGa~~V~v~v~~p  378 (479)
T PLN02440        339 EGKRVVVVDDSIVRGTTSSKIVRMLREAGAKEVHMRIASP  378 (479)
T ss_pred             cCceEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEECC
Confidence            9999999999999999999999999999999999999873

>PRK06781 amidophosphoribosyltransferase; Provisional

Probab=99.53  E-value=2.3e-14  Score=130.36  Aligned_cols=117  Identities=20%  Similarity=0.158  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCC-CCceeeeeeeeecCceeEEEecCC
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKL-PGEVISEAYVLEYGTDRLEMHVGA  144 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  144 (211)
                      .....+++.||+... .++|+|+++|..|...|..+|+.+|+|+..  +++++.. +.....+..+..+.+..|.... .
T Consensus       267 ~~R~~~G~~La~~~~-~~~D~vv~VP~s~~~~A~~~a~~~gip~~~~lik~~~~~rt~~~~~~~~R~~~v~~~f~~~~-~  344 (471)
T PRK06781        267 AARKNMGKRLAAEAP-IEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQELREQGVKMKLSAVR-G  344 (471)
T ss_pred             HHHHHHHHHHhhhCC-CCCcEEEEcChhHHHHHHHHHHHhCCCcccceEEEccCCCCCcCCCHHHHHHHHhcceeccc-c
Confidence            444588888887654 368999999999999999999999999864  3332211 1111111122223344555333 3


Q ss_pred             cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEe
Q 028297          145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  186 (211)
Q Consensus       145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~  186 (211)
                      ..+||+|+||||++|||+|+.+++++|+++||++|++.....
T Consensus       345 ~i~gk~VlLVDDvittGtTl~~~~~~Lk~aGA~eV~v~i~sP  386 (471)
T PRK06781        345 VVEGKRVVMIDDSIVRGTTSKRIVRMLREAGATEVHVRIASP  386 (471)
T ss_pred             ccCCceEEEEeceeccchHHHHHHHHHHHcCCcEEEEEECCC
Confidence            458999999999999999999999999999999999887653

>PRK07349 amidophosphoribosyltransferase; Provisional

Probab=99.52  E-value=5.4e-14  Score=128.49  Aligned_cols=116  Identities=17%  Similarity=0.185  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCceeee--eeeeecCceeEEEecCC
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISE--AYVLEYGTDRLEMHVGA  144 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  144 (211)
                      .....+++.||+... .++|+|+++|.+|+++|..+|+.+|+|+.. +.|.+.........  ..+....+..+.. ...
T Consensus       296 ~~R~~~G~~La~~~~-~~~DvVv~VP~sg~~~A~g~A~~lgip~~~~L~r~~y~grtfi~p~q~~R~~~~~~kl~~-~~~  373 (500)
T PRK07349        296 SYRQRLGQQLAKESP-VDADLVIGVPDSGIPAAIGFSQASGIPYAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNP-LKD  373 (500)
T ss_pred             HHHHHHHHHHhhhcc-cCCcEEEEeccccHHHHHHHHHHHCCCchhceEEEeccCccccCCCHHHHHhhhheeeec-ccc
Confidence            344577888875543 368999999999999999999999999964 22222110000000  0010011112211 123


Q ss_pred             cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEE
Q 028297          145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  185 (211)
Q Consensus       145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~  185 (211)
                      ..+||+||||||++|||+|+.+++++|+++||++|++....
T Consensus       374 ~~~gkrVlLVDDvIttGtTl~~~~~~Lr~aGAkeV~~~i~s  414 (500)
T PRK07349        374 VLAGKRIIIVDDSIVRGTTSRKIVKALRDAGATEVHMRISS  414 (500)
T ss_pred             ccCCCEEEEEeceeCCcHHHHHHHHHHHHhCCeEEEEEeCC
Confidence            35899999999999999999999999999999999877543

>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.50  E-value=4.9e-13  Score=105.32  Aligned_cols=120  Identities=20%  Similarity=0.308  Sum_probs=86.0

Q ss_pred             HhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCcee
Q 028297           63 LLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTDR  137 (211)
Q Consensus        63 l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~  137 (211)
                      .+-+.+..+.-.+.+++++.+.   +..+++|+-.|+++++..|.++++.|...  +.-... .+.+.        +++.
T Consensus        10 vLisee~I~~ri~ela~~I~~~y~g~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSY-g~~t~--------ssg~   80 (178)
T COG0634          10 VLISEEQIKARIKELAAQITEDYGGKDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSY-GGGTS--------SSGE   80 (178)
T ss_pred             EeeCHHHHHHHHHHHHHHHHHhhCCCceEEEEEcccchhhHHHHHHhcCCCceeEEEEEecc-CCCcc--------cCCc
Confidence            3344555555556666666543   45699999999999999999999988643  221111 11111        1122


Q ss_pred             EEEec--CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          138 LEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       138 ~~~~~--~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                      +.+..  +...+||+|||||||++||.||..+.+.|+..||+++.++++.+++..+
T Consensus        81 v~i~kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~~r~a~sv~i~tLldK~~~r  136 (178)
T COG0634          81 VKILKDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLKERGAKSVRIATLLDKPERR  136 (178)
T ss_pred             eEEecccccCCCCCeEEEEecccccChhHHHHHHHHHhCCCCeEEEEEEeeCcccc
Confidence            33322  2346999999999999999999999999999999999999999999743

>PRK08341 amidophosphoribosyltransferase; Provisional

Probab=99.50  E-value=9.9e-14  Score=125.29  Aligned_cols=115  Identities=19%  Similarity=0.185  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCceeeeeeeeecCceeEEEe-cCCc
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMH-VGAI  145 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  145 (211)
                      .....+++.|++.... ++|+|+++|..|..+|..+|+.+|+|+.. +.|.+...........+.  ....+.+. ....
T Consensus       255 ~~R~~~G~~La~~~~~-~~D~Vv~VPdsg~~~A~~~a~~lgip~~~~l~k~r~~~rtfi~~~qr~--~~~~~k~~~~~~~  331 (442)
T PRK08341        255 SARYRMGVELARESPA-EGDVVIAVPDSGRTAALGFAHESGIPYMEGLIKNRYIGRTFIMPSGRE--LKVKLKLSPVREV  331 (442)
T ss_pred             HHHHHHHHHhhcccCC-CCceEEEecCchHHHHHHHHHHhCCCchheEEEeccccccccCcCchh--hhheeeecccccc
Confidence            3444888888876543 57999999999999999999999999964 444332111111010111  11122211 1223


Q ss_pred             CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEE
Q 028297          146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  185 (211)
Q Consensus       146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~  185 (211)
                      .+||+|+||||++|||+|+.+++++|+++||++|++....
T Consensus       332 v~gk~VlLVDD~IttGtTl~~~~~~L~~aGAk~V~~~~~s  371 (442)
T PRK08341        332 INGKRVVLVDDSIVRGTTMKRIVKMLRDAGAREVHVRIAS  371 (442)
T ss_pred             cCCCEEEEEeeeeccHHHHHHHHHHHHhcCCcEEEEEEcC
Confidence            5899999999999999999999999999999999988754

>PRK09123 amidophosphoribosyltransferase; Provisional

Probab=99.49  E-value=2e-13  Score=124.49  Aligned_cols=114  Identities=19%  Similarity=0.190  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCceeEEEe-cCC
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTDRLEMH-VGA  144 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  144 (211)
                      .+.+.+++.|++.... ++|+|+++|.+|+++|..+|+.+++|+..  +|.+.. ...........+...-++... ...
T Consensus       279 ~~R~~~g~~La~~~~~-~~D~Vv~VP~sg~~~A~~la~~lgip~~~~lir~~y~-grt~i~~~q~~r~~~v~~k~~~~~~  356 (479)
T PRK09123        279 EVRKNIGRELARESPV-DADVVVPVPDSGVPAAIGYAQESGIPFELGIIRNHYV-GRTFIQPTQQIRNLGVKLKHNANRA  356 (479)
T ss_pred             HHHHHHHHHHHHhCCC-CCeEEEEcCccHHHHHHHHHHhcCCCeeheEEEEeec-CccccccccccccccEEEEeccccc
Confidence            5556888888877643 68999999999999999999999999963  443221 111010000001111112111 123


Q ss_pred             cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEE
Q 028297          145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC  183 (211)
Q Consensus       145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~  183 (211)
                      ..+||+||||||+++||+|+.++++.|+++||++|++++
T Consensus       357 ~~~gk~vvlvDD~i~tG~Tl~~~~~~l~~~Ga~~v~~~~  395 (479)
T PRK09123        357 VIEGKRVVLVDDSIVRGTTSRKIVQMLRDAGAKEVHLRI  395 (479)
T ss_pred             ccCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEE
Confidence            358999999999999999999999999999999999988

>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional

Probab=99.48  E-value=4.3e-13  Score=112.02  Aligned_cols=119  Identities=18%  Similarity=0.224  Sum_probs=85.5

Q ss_pred             HHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCC---------Ce-----EEeecCCCCCCc
Q 028297           61 TTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGA---------KF-----VPLRKPNKLPGE  123 (211)
Q Consensus        61 ~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~---------p~-----~~~~k~~~~~~~  123 (211)
                      ...+-+.+..+...+.+|.+|.+.   +..+|+|+..||+.++..|.+.|+.         |.     ..++-       
T Consensus        54 ~~vLis~~~I~~rI~~LA~~I~~dy~~~~~vilgILkGg~~FaadL~~~L~~~~~~~~~~~~~~~~~~dfi~v-------  126 (241)
T PTZ00149         54 TKILLPNGLIKDRVEKLAYDIKQVYGNEELHILCILKGSRGFFSALVDYLNRIHNYSSTESPKPPYQEHYVRV-------  126 (241)
T ss_pred             cEEEeCHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCCHHHHHHHHHHHhhhhhccccccCcccccccEEEE-------
Confidence            344556677777778888887653   3469999999999999999998872         21     11211       


Q ss_pred             eeeeeeeeecCceeEEEecC--CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          124 VISEAYVLEYGTDRLEMHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~--~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                         .+|+.....+.+.+...  ...+||+|||||||++||.|+.++++.|++.|++.+.+++++.+..
T Consensus       127 ---sSY~~~~s~g~v~i~~~~~~~l~gk~VLIVDDIidTG~Tl~~~~~~L~~~g~~~V~va~L~~K~~  191 (241)
T PTZ00149        127 ---KSYCNDESTGKLEIVSDDLSCLKDKHVLIVEDIIDTGNTLVKFCEYLKKFEPKTIRIATLFEKRT  191 (241)
T ss_pred             ---EEccCCCcCCceEEecccccccCCCEEEEEEeEeChHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence               11211111122222211  2259999999999999999999999999999999999999998875

>COG2236 Predicted phosphoribosyltransferases [General function prediction only]

Probab=99.48  E-value=1.3e-13  Score=111.21  Aligned_cols=111  Identities=18%  Similarity=0.333  Sum_probs=78.9

Q ss_pred             cCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCC-CeEEeecC-CCCCCceeeeeeeeecCceeEEE
Q 028297           65 LDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGA-KFVPLRKP-NKLPGEVISEAYVLEYGTDRLEM  140 (211)
Q Consensus        65 ~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~-p~~~~~k~-~~~~~~~~~~~~~~~~~~~~~~~  140 (211)
                      -+.+..+..+..+|+++.+.  .+|+|+++.+||+.+|+.|+..|++ |+..+.-. ....++..        +...+.-
T Consensus         7 vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRGG~~pariLsd~L~~~~l~~i~v~~y~~~~~~~--------~~~~v~~   78 (192)
T COG2236           7 VSWEEIHRLCRALAEKIRASGFKPDVIVAIARGGLIPARILSDFLGVKPLYSIKVEHYDETAERD--------GEAKVKY   78 (192)
T ss_pred             ecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCceehHHHHHHHhCCCceEEEEEEEehhhcccC--------Ccceeec
Confidence            45677788899999999754  7899999999999999999999998 66554321 11111000        0001111


Q ss_pred             --ecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEE
Q 028297          141 --HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  184 (211)
Q Consensus       141 --~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~  184 (211)
                        ..+. ..||+|||||||.+||.||..|.+.|++.....+..+++
T Consensus        79 ~~~~d~-l~GkkVLIVDDI~DTG~Tl~~a~~~l~~~~p~e~rta~l  123 (192)
T COG2236          79 PITIDP-LSGKKVLIVDDIVDTGETLELALEELKKLAPAEVRTAVL  123 (192)
T ss_pred             Cccccc-cCCCeEEEEecccCchHhHHHHHHHHHhhCchhhhhhhh
Confidence              1122 599999999999999999999999999955555554444

>PRK07631 amidophosphoribosyltransferase; Provisional

Probab=99.48  E-value=7.8e-14  Score=126.83  Aligned_cols=117  Identities=19%  Similarity=0.129  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCC-CCceeeeeeeeecCceeEEEecCC
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKL-PGEVISEAYVLEYGTDRLEMHVGA  144 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  144 (211)
                      .....+++.||+... .+.|+|+++|..|..+|..+|+.+|+|+..  +++++.. +.....+..+..+.+..|... ..
T Consensus       267 ~~R~~~G~~La~~~~-~~~D~VvpVP~s~~~~A~gla~~~gip~~~~lik~~~~~Rt~i~~~~~~R~~nv~~~f~~~-~~  344 (475)
T PRK07631        267 TARKNLGKRLALEAP-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVKMKLSPV-RG  344 (475)
T ss_pred             HHHHHHHHHHHhhCC-CCCcEEEEechhHHHHHHHHHHHHCCCcccceEEEecCCCCCcCCCHHHHHHHHhhhhhhc-cc
Confidence            344588888887653 367999999999999999999999999954  3322211 111111111222223344432 23


Q ss_pred             cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEe
Q 028297          145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  186 (211)
Q Consensus       145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~  186 (211)
                      ..+||+|+||||++|||+|+.+++++|+++||++|++.....
T Consensus       345 ~v~gk~VlLVDDsittGtTl~~~~~~L~~aGA~eV~v~~~sP  386 (475)
T PRK07631        345 VVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVRISSP  386 (475)
T ss_pred             ccCCceEEEEeeeeccHHHHHHHHHHHHHcCCCEEEEEEeCC
Confidence            458999999999999999999999999999999998887653

>PRK06388 amidophosphoribosyltransferase; Provisional

Probab=99.47  E-value=3.2e-13  Score=122.87  Aligned_cols=117  Identities=16%  Similarity=0.204  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eec-CCCCCCceeeeeeeeecCceeEEEe-cCC
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRK-PNKLPGEVISEAYVLEYGTDRLEMH-VGA  144 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  144 (211)
                      .....+++.|++... .+.|+|+++|..|.++|..+|+.+|+|+.. +.| +....+... .....+...-++.+. ...
T Consensus       275 ~~R~~~G~~La~~~~-~~~D~VvpVP~s~~~~A~g~a~~~gip~~~~L~r~r~~~r~fi~-~~q~~R~~~~~~kl~~~~~  352 (474)
T PRK06388        275 QARVRMGMRLAKESP-VEADVVVPVPDSGRSQAIGFSMASGIPYTEGLIKNRYSERTFIM-PTQSDRKAAIKLKLNPIRE  352 (474)
T ss_pred             HHHHHHHHHHHhhcc-CCCcEEEeeCCCcHHHHHHHHHHhCCCchhheEEecccCCcccC-CchhhhhhceeEEeccccc
Confidence            344478888887653 367999999999999999999999999954 233 322111111 000000111122211 122


Q ss_pred             cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEe
Q 028297          145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  186 (211)
Q Consensus       145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~  186 (211)
                      ..+||+||||||++|||+|+.+++++|+++||++|++.....
T Consensus       353 ~i~gk~VlLVDDsittGtTl~~~~~~L~~aGak~V~~ri~sP  394 (474)
T PRK06388        353 VISGKRIVLVDDSIVRGNTMRFIVKIMRKYGAKEVHVRIGSP  394 (474)
T ss_pred             cccCceEEEEeCeECcHHHHHHHHHHHHHcCCCEEEEEeCCC
Confidence            358999999999999999999999999999999998876543

>PRK07847 amidophosphoribosyltransferase; Provisional

Probab=99.45  E-value=4.7e-13  Score=122.64  Aligned_cols=117  Identities=21%  Similarity=0.218  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCceeeeeeeeecCceeEEEe-cCCc
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMH-VGAI  145 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  145 (211)
                      .....+++.||+... .+.|+|+++|.+|+++|..+|+.+|+|+.. +.|.+.............+...-++... ....
T Consensus       286 ~~R~~~G~~La~~~~-~~~D~VvpVP~sG~~~A~g~a~~~gip~~~~l~kn~~~grtfi~~~q~~r~~~~r~k~~~~~~~  364 (510)
T PRK07847        286 AARVEIGRRLAREHP-VEADLVIPVPESGTPAAVGYAQESGIPFGQGLVKNAYVGRTFIQPSQTIRQLGIRLKLNPLREV  364 (510)
T ss_pred             HHHHHHHHHHHhhCC-CCCeEEEeccCchHHHHHHHHHHhCCChhhceEeecccccCccCcchhhhhhceeeecCccccc
Confidence            444588888887653 367999999999999999999999999855 3332111000000000000000011110 1233


Q ss_pred             CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEE
Q 028297          146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  185 (211)
Q Consensus       146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~  185 (211)
                      .+||+||||||++|||+|+.++++.|+++||+.|++....
T Consensus       365 ~~gk~vllVDD~ittG~T~~~~~~~L~~~ga~~v~~ri~s  404 (510)
T PRK07847        365 IRGKRLVVVDDSIVRGNTQRALVRMLREAGAAEVHVRISS  404 (510)
T ss_pred             cCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEEECC
Confidence            5999999999999999999999999999999998876554

>PRK00129 upp uracil phosphoribosyltransferase; Reviewed

Probab=99.33  E-value=1.7e-11  Score=100.81  Aligned_cols=99  Identities=23%  Similarity=0.327  Sum_probs=74.8

Q ss_pred             cEEEEecCCccchHHHHHHHhC-CCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHH
Q 028297           87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLS  165 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~  165 (211)
                      -++|++.++|++++..+++.++ +++..+...+... ..         +........+...+|++||||||+++||+|+.
T Consensus        72 ~vvV~IlrgG~~~~~~l~~~l~~~~~~~i~~~r~~~-t~---------~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~  141 (209)
T PRK00129         72 LVIVPILRAGLGMVDGVLKLIPSARVGHIGLYRDEE-TL---------EPVEYYVKLPEDIDERTVIVVDPMLATGGSAI  141 (209)
T ss_pred             EEEEEEeCCCHHHHHHHHHhCCcCeeeeEEEEeCCC-CC---------CCEEEEeeCCCcCCCCEEEEECCcccchHHHH
Confidence            4888999999999999999997 4555444332110 00         00011222233358999999999999999999


Q ss_pred             HHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297          166 AAVRLLERMGAEVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       166 ~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~  195 (211)
                      ++++.|++.|+++|.++++...+.+.+++.
T Consensus       142 ~ai~~L~~~G~~~I~~~~ll~~~~gl~~l~  171 (209)
T PRK00129        142 AAIDLLKKRGAKNIKVLCLVAAPEGIKALE  171 (209)
T ss_pred             HHHHHHHHcCCCEEEEEEEecCHHHHHHHH
Confidence            999999999999999999999988888875

>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]

Probab=99.30  E-value=5.7e-12  Score=112.05  Aligned_cols=117  Identities=22%  Similarity=0.232  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCceeeeeeeeecCceeEEEe-cCCc
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAYVLEYGTDRLEMH-VGAI  145 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  145 (211)
                      .....+++.||+.... +.|+|+|+|.+|.+.|-.+|+.+|+|+.. +-|.+....+....+...+...-++.+. ....
T Consensus       267 ~~R~~mG~~La~e~~~-eaDvVipVPDSg~~aAig~A~~sGiPy~~GliKNrYvgRTFI~P~q~~R~~~Vr~KLnpvr~~  345 (470)
T COG0034         267 EARKRMGEKLAEEIPV-EADVVIPVPDSGRPAAIGYARASGIPYEEGLIKNRYVGRTFIMPTQELREKGVRLKLNPVREV  345 (470)
T ss_pred             HHHHHHHHHHHHhCCc-cccEEEecCCCChHHHHHHHHHhCCchhhccccccccceeeeCCcHHHHHhhhhhhcCchHHH
Confidence            3445888888877643 56999999999999999999999999955 3233222111111111001000012211 1234


Q ss_pred             CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEE
Q 028297          146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  185 (211)
Q Consensus       146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~  185 (211)
                      .+||+|+||||-|-.|+|++..+++|+++||++|++..-.
T Consensus       346 v~GKrVvlVDDSIVRGTTsr~IV~mlReAGAkEVHvrias  385 (470)
T COG0034         346 VKGKRVVLVDDSIVRGTTSRRIVQMLREAGAKEVHVRIAS  385 (470)
T ss_pred             hCCCeEEEEccccccCccHHHHHHHHHHhCCCEEEEEecC
Confidence            6999999999999999999999999999999999987654

>TIGR01091 upp uracil phosphoribosyltransferase

Probab=99.28  E-value=4.8e-11  Score=97.96  Aligned_cols=99  Identities=23%  Similarity=0.276  Sum_probs=73.7

Q ss_pred             cEEEEecCCccchHHHHHHHhC-CCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHH
Q 028297           87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLS  165 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~  165 (211)
                      -+++++-++|+.++..+++.+. +++..+.+.+.. ...         +........+...+|++||||||+++||+|+.
T Consensus        70 i~~V~ILrgg~~~~~~l~~~l~~~~v~~i~~~r~~-~t~---------~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~  139 (207)
T TIGR01091        70 IVLVPILRAGLGMVDGVLKLIPEAKVGHVGAYRNE-ETL---------KPVPYYSKLPEDIDERTVIVLDPMLATGGTMI  139 (207)
T ss_pred             EEEEEEeCCcHHHHHHHHHhCCcCceeEEEEEeCC-CCC---------CCEEEEecCCCCCCCCEEEEECCCccchHHHH
Confidence            4778888999999999999986 455444332211 000         00011212233358999999999999999999


Q ss_pred             HHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297          166 AAVRLLERMGAEVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       166 ~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~  195 (211)
                      ++++.|++.|+++|.++++...+.+.+++.
T Consensus       140 ~ai~~L~~~G~~~I~v~~ll~~~~gl~~l~  169 (207)
T TIGR01091       140 AALDLLKKRGAKKIKVLSIVAAPEGIEAVE  169 (207)
T ss_pred             HHHHHHHHcCCCEEEEEEEecCHHHHHHHH
Confidence            999999999999999999999988777774

that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.

>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=99.13  E-value=8.1e-10  Score=86.10  Aligned_cols=118  Identities=22%  Similarity=0.258  Sum_probs=77.8

Q ss_pred             cCHHHHHHHHHHHHHHHhhc----CCcEEEEecCCccchHHHHHHHhC------CCeEEeecCC---CCCCceeeeeeee
Q 028297           65 LDHKAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAIG------AKFVPLRKPN---KLPGEVISEAYVL  131 (211)
Q Consensus        65 ~~~~~~~~~~~~la~~i~~~----~~d~Iv~i~~gG~~~A~~lA~~L~------~p~~~~~k~~---~~~~~~~~~~~~~  131 (211)
                      .++...+.+...++.++.+.    +--+++|+.+||.++|+.+++.++      +|+..+.-.-   ......   ....
T Consensus         7 ld~~~i~RtitRia~eIiErnk~~~~~vlvGIktrGv~lA~rl~~~i~~~Eg~~vp~g~lDIt~yRDDl~~~~---~~~p   83 (179)
T COG2065           7 LDEAAIRRTITRIAHEIIERNKGLDNLVLVGIKTRGVPLAERLAERIEELEGIEVPVGELDITLYRDDLTQKG---PLRP   83 (179)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCCceEEEeEecCCHHHHHHHHHHHHHHhCCCCCeeeEEeEEeechhhhcC---ccCC
Confidence            35555555555666665443    334889999999999999999762      4554332110   000000   0000


Q ss_pred             ecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEEEEEEEEeCch
Q 028297          132 EYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLPE  189 (211)
Q Consensus       132 ~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V~v~~~~~~~~  189 (211)
                      .. +.. .  ......||+|+||||++-||.|+++|.+.|...| +..|..+|+++++.
T Consensus        84 ~~-~~t-~--~~~di~~k~VILVDDVLytGRTIRAAldal~d~GRPa~I~LavLVDRGH  138 (179)
T COG2065          84 QA-KTT-I--LPFDITGKRVILVDDVLYTGRTIRAALDALVDYGRPAKIQLAVLVDRGH  138 (179)
T ss_pred             cc-cCc-c--CcccccCCEEEEEeeecccCccHHHHHHHHHhcCCcceEEEEEEEcCCC
Confidence            00 000 0  1122589999999999999999999999999999 68999999999974

>COG1926 Predicted phosphoribosyltransferases [General function prediction only]

Probab=99.13  E-value=1.8e-09  Score=87.41  Aligned_cols=127  Identities=23%  Similarity=0.265  Sum_probs=82.0

Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCce-----eee-e-----eeeecC
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEV-----ISE-A-----YVLEYG  134 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~-----~~~-~-----~~~~~~  134 (211)
                      +..+.+++.++..-. .+..+|.++|+||++.|..+|+.||.|+..  +||-.-..+.-     ..+ .     +...+.
T Consensus         9 dAGr~La~~l~~~~~-~~~~iVlaLpRGGvpva~evA~~lga~ldvliVrKiG~P~n~E~aiGAvae~g~~v~n~~~~~~   87 (220)
T COG1926           9 DAGRKLAQELAALRD-LKDVIVLALPRGGVPVAFEVAQALGAPLDVLIVRKIGAPGNPELAIGAVAEGGDVVLNYDVVRS   87 (220)
T ss_pred             HHHHHHHHHHHhhcc-CCCcEEEEecCCCchHHHHHHHHhCCCeeEEEEeecCCCCCchhceeeeccCCcEecchhhhhh
Confidence            334444444443221 133589999999999999999999999844  55543221110     000 0     000000


Q ss_pred             --------------------ceeEEEecC---CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          135 --------------------TDRLEMHVG---AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       135 --------------------~~~~~~~~~---~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                                          +.......+   ..++||+|+||||-+.||+||.++++.++++|++.+.+++-+...++.
T Consensus        88 ~~i~~~~i~~~~~~e~~El~rrr~~yr~~~~~~~~~g~~VIlVDDGiATGatm~aAi~~~r~~~~~~IviAVPV~p~~a~  167 (220)
T COG1926          88 LGIDDAYIEAAAARERKELLRRREAYRGGRPVPSLKGRTVILVDDGIATGATMKAAVRALRAKGPKEIVIAVPVAPEDAA  167 (220)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEEeCCcchhHHHHHHHHHHHhcCCceEEEEcccCCHHHH
Confidence                                000000111   125999999999999999999999999999999999999998877755


Q ss_pred             cccC
Q 028297          192 RRLD  195 (211)
Q Consensus       192 ~~l~  195 (211)
                      ..|+
T Consensus       168 ~~l~  171 (220)
T COG1926         168 AELE  171 (220)
T ss_pred             HHHH
Confidence            5554

>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B

Probab=99.05  E-value=1e-11  Score=92.97  Aligned_cols=57  Identities=19%  Similarity=0.121  Sum_probs=43.1

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhc
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLL   65 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~   65 (211)
                      .|++||+|||||||++.|     +|+++||++.               ++||.+|++|+.. .++++++.+.+++++.
T Consensus        42 ~~~v~g~dv~iiqs~~~~-----~nd~lmeLll~i~a~r~~~a~~i~~ViPYl~YaRQDr~-~~ge~isak~~a~lL~  113 (116)
T PF13793_consen   42 PESVRGKDVFIIQSTSPP-----VNDNLMELLLLIDALRRAGAKRITLVIPYLPYARQDRR-KPGEPISAKVVAKLLS  113 (116)
T ss_dssp             SS--TTSEEEEE---SSS-----HHHHHHHHHHHHHHHHHTTBSEEEEEESS-TTTTSSSS-STTC--HHHHHHHHHH
T ss_pred             cccccCCceEEEEecCCc-----hhHHHHHHHHHHHHHHHcCCcEEEEeccchhhhhhccC-CCCCcchHHHHHHHHH
Confidence            479999999999999865     8999999844               7999999999999 9999999888888775

...

>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]

Probab=98.96  E-value=1e-09  Score=95.65  Aligned_cols=112  Identities=18%  Similarity=0.208  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEee-cCCCCCCceeeeeeeee-cC-ceeEEEecCCcCC
Q 028297           71 KDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR-KPNKLPGEVISEAYVLE-YG-TDRLEMHVGAIEP  147 (211)
Q Consensus        71 ~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~-k~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~  147 (211)
                      ..+++.||. ....+.|+|+++|.+|..-|...|...|+|+.... |.+.........+.+.+ .+ +..+-... ...+
T Consensus       278 ~~~G~~LA~-e~P~d~DvVi~VPdS~~~aAlgyA~~sG~py~e~l~rnrYvGRTFI~P~q~iR~~~V~~Kl~~l~-~~~~  355 (474)
T KOG0572|consen  278 LQCGEQLAT-EAPVDADVVIPVPDSGTTAALGYAAKSGLPYQEVLIRNRYVGRTFIEPNQRIRQLGVKKKLGPLR-QNFE  355 (474)
T ss_pred             HHHHhHhhh-cCCcccceEEecCCchhHHHHHHHHHhCCchhhhhhhcccccceecCccHHHHHhhhhhhcccch-hhcC
Confidence            366666665 22347899999999999999999999999996632 22221111111111111 11 11232222 2359


Q ss_pred             CCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEE
Q 028297          148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  184 (211)
Q Consensus       148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~  184 (211)
                      ||+|+||||-|--|+|+...+++|+++||+.|+...-
T Consensus       356 GKrvvlVDDSIVRGtTs~~IVkmlreaGAkeVh~riA  392 (474)
T KOG0572|consen  356 GKRVVLVDDSIVRGTTSSPIVKMLREAGAKEVHIRIA  392 (474)
T ss_pred             CceEEEEecceeccCchHHHHHHHHHcCCcEEEEEec
Confidence            9999999999999999999999999999999987654

>KOG3367 consensus Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=98.81  E-value=3.5e-08  Score=77.54  Aligned_cols=121  Identities=17%  Similarity=0.303  Sum_probs=78.9

Q ss_pred             eHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhC-------CCeEE--eecCCCCCCceee
Q 028297           59 DITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIG-------AKFVP--LRKPNKLPGEVIS  126 (211)
Q Consensus        59 d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~-------~p~~~--~~k~~~~~~~~~~  126 (211)
                      |+....--.++.+.-.+.+|.-+.+.   .+-+++|+..||+.+-+.+-++|.       .|+..  +|-+.        
T Consensus        31 Dls~v~ip~gli~dr~~rlakDi~~~~g~~~i~~lcVlkG~ykF~adLve~l~n~~s~~~~pmtvDFIR~kS--------  102 (216)
T KOG3367|consen   31 DLSGVVIPHGLIRDRVERLAKDIMKEIGNKPIIFLCVLKGGYKFFADLVERLKNRNSDRPLPMTVDFIRAKS--------  102 (216)
T ss_pred             cccccccccchhhhHHHHhhhhhhhccCCCceEEEEEecchhHHHHHHHHHHhhcccCCCcceeeeeeehhh--------
Confidence            33333333455555555666555433   345888999999998777777752       33322  33211        


Q ss_pred             eeeeeecCceeEEEecCC---cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          127 EAYVLEYGTDRLEMHVGA---IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~---~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                        |......+.+.+..++   .+.||+|||||||++||.||....+.+++.+++.+.++.+..+..
T Consensus       103 --Y~n~~stg~iqiig~d~l~~ltgK~VliVeDIvdTGrTl~~Lls~~~~~k~~~v~vasLL~Krt  166 (216)
T KOG3367|consen  103 --YCNDQSTGDIQIIGGDDLSTLTGKNVLIVEDIVDTGRTLSTLLSHMKAYKPSMVKVASLLVKRT  166 (216)
T ss_pred             --hcCCcccCCceeecCCCHHHhcCCcEEEEEeeccccchHHHHHHHHHhcCccceeeeeeccccc
Confidence              1111112233322121   259999999999999999999999999999999999999988764

>PLN02541 uracil phosphoribosyltransferase

Probab=98.53  E-value=9.3e-07  Score=74.23  Aligned_cols=49  Identities=39%  Similarity=0.674  Sum_probs=44.4

Q ss_pred             CCCEEEEEeccccchHHHHHHHHHHHhCCCe--EEEEEEEEeCchhhcccC
Q 028297          147 PGERALVIDDLVATGGTLSAAVRLLERMGAE--VVECACVVGLPEGQRRLD  195 (211)
Q Consensus       147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~--~V~v~~~~~~~~~~~~l~  195 (211)
                      ++++|||+||++.||+|+.++++.|+++|++  .+.+++++..++|.+++.
T Consensus       156 ~~~~VlllDpmLATGgS~~~ai~~L~~~Gv~~~~I~~v~~ias~~Gl~~i~  206 (244)
T PLN02541        156 EGSRVLVVDPMLATGGTIVAAIDELVSRGASVEQIRVVCAVAAPPALKKLS  206 (244)
T ss_pred             CCCEEEEECcchhhhHHHHHHHHHHHHcCCCcccEEEEEEEECHHHHHHHH
Confidence            4789999999999999999999999999997  888999998888777764

>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=98.46  E-value=1.3e-06  Score=71.23  Aligned_cols=110  Identities=22%  Similarity=0.298  Sum_probs=76.3

Q ss_pred             EEEEecCCccchHHHHHHHhC-CCeEEee-cCCCCCCceeeeeeeeecCceeEEE-ecCCcCCCCEEEEEeccccchHHH
Q 028297           88 VVAGIEARGFVFGPSIALAIG-AKFVPLR-KPNKLPGEVISEAYVLEYGTDRLEM-HVGAIEPGERALVIDDLVATGGTL  164 (211)
Q Consensus        88 ~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~-k~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gk~VLIVDDiitTG~Tl  164 (211)
                      ++|++-+.|..+...+.+.+- .+...+- .|...+.+            ...+. ..+...+++.|+|+|-++.||+|+
T Consensus        73 ~~V~ILRAGl~m~~gl~~~~P~a~vG~ig~~Rdeet~~------------p~~yy~KLP~~~~~~~viv~DPMLATG~s~  140 (210)
T COG0035          73 VIVPILRAGLGMVEGLLKLIPSARVGHIGIYRDEETLE------------PVLYYEKLPEDIDERTVIVLDPMLATGGSA  140 (210)
T ss_pred             EEEEEeeccccHHHHHHHhCCcceEEEEEEEecCccCc------------eehhHHhCCCcccCCeEEEECchhhccHhH
Confidence            567888999999888888763 2322221 11111110            01111 123345899999999999999999


Q ss_pred             HHHHHHHHhC-CCeEEEEEEEEeCchhhcccC----CCCeEEEEccccccc
Q 028297          165 SAAVRLLERM-GAEVVECACVVGLPEGQRRLD----GKPLYILVEPRLSVN  210 (211)
Q Consensus       165 ~~a~~~L~~~-Ga~~V~v~~~~~~~~~~~~l~----~~~l~sl~~~~~~~~  210 (211)
                      ..|++.|++. |++.+.+.+++..++|.+++.    +++++. ..+++.||
T Consensus       141 i~ai~~L~~~G~~~~I~~v~~vAapeGi~~v~~~~p~v~I~t-a~iD~~Ln  190 (210)
T COG0035         141 IAAIDLLKKRGGPKNIKVVSLVAAPEGIKAVEKAHPDVEIYT-AAIDEGLN  190 (210)
T ss_pred             HHHHHHHHHhCCCceEEEEEEEecHHHHHHHHHhCCCCeEEE-EEeccccc
Confidence            9999999999 899999999999999777764    677776 33444443

>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C

Probab=98.36  E-value=3.9e-06  Score=68.92  Aligned_cols=98  Identities=20%  Similarity=0.235  Sum_probs=68.8

Q ss_pred             cEEEEecCCccchHHHHHHHhC-CCeEEeecCCCCCCceeeeeeeeecCceeEE-EecCCcCCCCEEEEEeccccchHHH
Q 028297           87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLE-MHVGAIEPGERALVIDDLVATGGTL  164 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gk~VLIVDDiitTG~Tl  164 (211)
                      -++|++-++|..+...+.+.+- .++..+.-++....           .+..+. ...+...++++|+|+|-++.||+|+
T Consensus        69 i~~V~IlRaG~~m~~~~~~~~p~a~~g~i~i~r~~~t-----------~~p~~~y~~LP~~i~~~~VillDpmlaTG~s~  137 (207)
T PF14681_consen   69 ICIVPILRAGLPMLEGFREVFPDARVGHIGIQRDEET-----------LEPVLYYNKLPEDIENRKVILLDPMLATGGSA  137 (207)
T ss_dssp             EEEEEETTTHHHHHHHHHHHSTTSEEEEEEEEEETTT-----------SSEEEEEEE--TTGTTSEEEEEESEESSSHHH
T ss_pred             EEEEEEeCCcHHHHHHHHHhCCCcceEEEEEEEcCCc-----------cceeeeHhhCCCCccCCEEEEEeccccchhhH
Confidence            4778888999999998888873 45444321111000           001111 1223334899999999999999999


Q ss_pred             HHHHHHHHhCCC--eEEEEEEEEeCchhhcccC
Q 028297          165 SAAVRLLERMGA--EVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       165 ~~a~~~L~~~Ga--~~V~v~~~~~~~~~~~~l~  195 (211)
                      .++++.|+++|+  +.+.+++++..++|.+++.
T Consensus       138 ~~ai~~L~~~G~~~~~I~~v~~ias~~Gl~~l~  170 (207)
T PF14681_consen  138 IAAIEILKEHGVPEENIIIVSVIASPEGLERLL  170 (207)
T ss_dssp             HHHHHHHHHTTG-GGEEEEEEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcceEEEEEEEecHHHHHHHH
Confidence            999999999987  7899999998888777764

...

>PF15609 PRTase_2: Phosphoribosyl transferase

Probab=98.17  E-value=4.7e-05  Score=61.31  Aligned_cols=124  Identities=19%  Similarity=0.225  Sum_probs=83.6

Q ss_pred             CHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeec-CCCCCCceeeeeeeeecC--ce-eEE
Q 028297           66 DHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRK-PNKLPGEVISEAYVLEYG--TD-RLE  139 (211)
Q Consensus        66 ~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k-~~~~~~~~~~~~~~~~~~--~~-~~~  139 (211)
                      +|...+.+...|+.++.+.  +.-+++|-..-.--++..+++.++-...++.. |+..++....-.+..++.  .. .++
T Consensus        32 ~P~~~~~~~~~La~~~~~~~~~~~lvIGfAETATgLG~~V~~~~~~~~~ylhTTR~~v~~~~~~~~F~E~HSHAt~h~ly  111 (191)
T PF15609_consen   32 RPSVMRDAGRLLAAQVPEALPGPVLVIGFAETATGLGHGVFDALGAACLYLHTTREPVPGVPPLLEFEEEHSHATDHLLY  111 (191)
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHHHHHHhhhccceeeeccccCCCCccceeeeccccccccceec
Confidence            6888889999999988765  56789999988888999999998743334332 333344111111222221  11 222


Q ss_pred             Eec-CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCC-eEEEEEEEEeCch
Q 028297          140 MHV-GAIEPGERALVIDDLVATGGTLSAAVRLLERMGA-EVVECACVVGLPE  189 (211)
Q Consensus       140 ~~~-~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga-~~V~v~~~~~~~~  189 (211)
                      ... ......+.+++|||=+|||+|....++.|++.-. +.+.++++.+-.+
T Consensus       112 ~~~~~~l~~~~~lVLVDDEiSTG~T~lnli~al~~~~p~~~yvvasL~d~~~  163 (191)
T PF15609_consen  112 PPDPDLLRNARTLVLVDDEISTGNTFLNLIRALHAKYPRKRYVVASLLDWRS  163 (191)
T ss_pred             CCChHHhcCCCCEEEEecCccchHHHHHHHHHHHHhCCCceEEEEEEeeCCC
Confidence            211 1234577999999999999999999999988654 5677778887654

>PF15610 PRTase_3: PRTase ComF-like

Probab=96.75  E-value=0.011  Score=50.13  Aligned_cols=72  Identities=15%  Similarity=0.165  Sum_probs=47.0

Q ss_pred             eEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEE-EEEeC-ch---hhc-ccCCCCeEEEEcccccc
Q 028297          137 RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECA-CVVGL-PE---GQR-RLDGKPLYILVEPRLSV  209 (211)
Q Consensus       137 ~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~-~~~~~-~~---~~~-~l~~~~l~sl~~~~~~~  209 (211)
                      .+.+.... .+||.+|.+|||-.||++-..+.+.+++.|++...+. ..++. ..   ..| +|+-+.+.++.++.+++
T Consensus       128 ~y~ID~~~-l~gk~lIflDDIkITGshE~~V~~~~~~~~~~~~~~yly~aeln~~i~p~IEn~lN~~~v~s~~Dl~~ii  205 (274)
T PF15610_consen  128 TYHIDKEF-LSGKHLIFLDDIKITGSHEDKVRKILKEYGLENDFIYLYYAELNKDIDPNIENRLNYVAVPSIKDLAEII  205 (274)
T ss_pred             ceEecHHH-hCCcEEEEeccEEecCcHHHHHHHHHHHcCccccEEEEEEecccccCCcchhhhhhhhccCcHHHHHHHh
Confidence            34443333 5999999999999999999999999999998763333 33332 11   222 23344555555555443

>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only]

Probab=95.68  E-value=0.062  Score=43.76  Aligned_cols=59  Identities=20%  Similarity=0.349  Sum_probs=45.6

Q ss_pred             CCCCEEEEEeccccchHHHHHHHHHHHhCCCe--EEEEEEEEeCchhhcc-cCCCCeEEEEc
Q 028297          146 EPGERALVIDDLVATGGTLSAAVRLLERMGAE--VVECACVVGLPEGQRR-LDGKPLYILVE  204 (211)
Q Consensus       146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~--~V~v~~~~~~~~~~~~-l~~~~l~sl~~  204 (211)
                      .-.++|||.=-++.||.|+.+|++.|+++|..  .+....+.-.+.|.+. .+..|...+++
T Consensus       187 I~sR~VLLmYPi~stGnTV~~Av~VL~EhgVp~s~IiL~sLF~tP~gak~i~~~fP~itilt  248 (267)
T KOG1017|consen  187 ITSRRVLLMYPIISTGNTVCKAVEVLKEHGVPDSNIILVSLFITPTGAKNITRKFPYITILT  248 (267)
T ss_pred             ccceeEEEEeeeecCCccHHHHHHHHHHcCCCcccEEEEEeeecchhhHHHHHhCCeEEEEe
Confidence            47789999999999999999999999999963  4565666655554444 45777666665

>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B

Probab=93.65  E-value=1.4  Score=32.74  Aligned_cols=75  Identities=17%  Similarity=0.206  Sum_probs=44.9

Q ss_pred             CccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc--hH--HHHHHHHH
Q 028297           95 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT--GG--TLSAAVRL  170 (211)
Q Consensus        95 gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT--G~--Tl~~a~~~  170 (211)
                      +.-.+|..+|+.||.++..+..++-..++.            .+.+  ....+|++|+||-++...  -.  -+.-++++
T Consensus         8 ~~~~La~~ia~~L~~~~~~~~~~~F~dGE~------------~v~i--~~~v~g~dv~iiqs~~~~~nd~lmeLll~i~a   73 (116)
T PF13793_consen    8 SSQDLAERIAEALGIPLGKVETKRFPDGET------------YVRI--PESVRGKDVFIIQSTSPPVNDNLMELLLLIDA   73 (116)
T ss_dssp             SGHHHHHHHHHHTTS-EE-EEEEE-TTS-E------------EEEE--SS--TTSEEEEE---SSSHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCceeeeEEEEcCCCCE------------EEEe--cccccCCceEEEEecCCchhHHHHHHHHHHHH
Confidence            344699999999999887654333222221            2333  334589999999998875  22  34557788


Q ss_pred             HHhCCCeEEEEEE
Q 028297          171 LERMGAEVVECAC  183 (211)
Q Consensus       171 L~~~Ga~~V~v~~  183 (211)
                      ++++||+.|.++.
T Consensus        74 ~r~~~a~~i~~Vi   86 (116)
T PF13793_consen   74 LRRAGAKRITLVI   86 (116)
T ss_dssp             HHHTTBSEEEEEE
T ss_pred             HHHcCCcEEEEec
Confidence            8999998876553

...

>PRK02812 ribose-phosphate pyrophosphokinase; Provisional

Probab=91.00  E-value=2.8  Score=36.88  Aligned_cols=82  Identities=15%  Similarity=0.165  Sum_probs=53.4

Q ss_pred             EEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hHH---
Q 028297           88 VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---  163 (211)
Q Consensus        88 ~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~T---  163 (211)
                      .|++ -.+.-.+|..+|+.||+++..+..++-..++.            .+.  .....+|++|+||-..... ...   
T Consensus        23 ~i~~-g~~~~~la~~ia~~lg~~l~~~~~~~FpDGE~------------~v~--i~~~vrg~~V~ivqs~~~p~nd~l~e   87 (330)
T PRK02812         23 RLFS-GSSNPALAQEVARYLGMDLGPMIRKRFADGEL------------YVQ--IQESIRGCDVYLIQPTCAPVNDHLME   87 (330)
T ss_pred             EEEE-CCCCHHHHHHHHHHhCCCceeeEEEECCCCCE------------EEE--eCCCCCCCEEEEECCCCCCccHHHHH
Confidence            4444 44556799999999999986654333223332            222  2333489999999986533 222   


Q ss_pred             HHHHHHHHHhCCCeEEEEEEE
Q 028297          164 LSAAVRLLERMGAEVVECACV  184 (211)
Q Consensus       164 l~~a~~~L~~~Ga~~V~v~~~  184 (211)
                      +.-+++.++++||++|.++.-
T Consensus        88 Lll~~~alr~~ga~ri~~ViP  108 (330)
T PRK02812         88 LLIMVDACRRASARQITAVIP  108 (330)
T ss_pred             HHHHHHHHHHhCCceEEEEEe
Confidence            456778889999998776554

>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional

Probab=90.29  E-value=3.7  Score=37.60  Aligned_cols=83  Identities=13%  Similarity=0.119  Sum_probs=52.6

Q ss_pred             EEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hH---H
Q 028297           88 VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG---T  163 (211)
Q Consensus        88 ~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~---T  163 (211)
                      .++-.-.+.-.+|..+|..||+++..+..++-..++.            .+.+  ...++|+.|+||-..... -.   =
T Consensus       120 m~I~sgs~~~~LA~~IA~~Lg~~l~~~~~~rFpDGE~------------~Vri--~e~VrG~dV~IVqS~~~pvNd~LmE  185 (439)
T PTZ00145        120 AILFSGSSNPLLSKNIADHLGTILGRVHLKRFADGEV------------SMQF--LESIRGKDVYIIQPTCPPVNENLIE  185 (439)
T ss_pred             eEEEECCCCHHHHHHHHHHhCCCceeeEEEECCCCCE------------EEEE--CCCcCCCeEEEEecCCCCCcHHHHH
Confidence            3333334456799999999999987655444333332            2222  233489999999875433 11   2


Q ss_pred             HHHHHHHHHhCCCeEEEEEEE
Q 028297          164 LSAAVRLLERMGAEVVECACV  184 (211)
Q Consensus       164 l~~a~~~L~~~Ga~~V~v~~~  184 (211)
                      +.-+++.++++||+.|.++.-
T Consensus       186 LLllidAlr~agAkrItlViP  206 (439)
T PTZ00145        186 LLLMISTCRRASAKKITAVIP  206 (439)
T ss_pred             HHHHHHHHHHhccCeEEEEee
Confidence            345677888999988766654

>KOG1377 consensus Uridine 5'- monophosphate synthase/orotate phosphoribosyltransferase [Nucleotide transport and metabolism]

Probab=89.97  E-value=1.3  Score=37.38  Aligned_cols=133  Identities=14%  Similarity=0.097  Sum_probs=75.4

Q ss_pred             eeeecceeeeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcE--EEEecCCc-cchHHHHHHHhCCC
Q 028297           36 CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISV--VAGIEARG-FVFGPSIALAIGAK  110 (211)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~--Iv~i~~gG-~~~A~~lA~~L~~p  110 (211)
                      +..+..+...+-...|    .+.|.... ..+..+..++..++..|-+.  .+|+  +++++..| ...+..+|+..+++
T Consensus        48 ~~~~Gpf~l~sk~h~d----i~~df~~~-~~~k~L~aLA~a~~f~I~edrkffDigntvg~qY~gg~~kia~wadl~n~h  122 (261)
T KOG1377|consen   48 ALRFGPFILKSKTHSD----IFFDFSLF-NSGKDLRALAQAYAFLIFEDRKFFDIGNTVGLQYKGGPLKIASWADLVNAH  122 (261)
T ss_pred             HHhhCCeEeeccccCc----eeeccccc-ccHHHHHHHHHHHHHHHHhhhhcccccceeccccccchHHHHHHHHHHhcc
Confidence            3556666665444433    35566544 25677788888888877554  5799  99999766 66677888888776


Q ss_pred             eEEee------cCCCCCCceeeeeeeeecC-ceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEE
Q 028297          111 FVPLR------KPNKLPGEVISEAYVLEYG-TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC  183 (211)
Q Consensus       111 ~~~~~------k~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~  183 (211)
                      ...-+      +++...          ..+ .+-+-   ....++|.+|+.||+.++|.-+.+.  .+.-....+.+..+
T Consensus       123 ~v~g~~i~~g~~rk~~k----------~~~egG~ll---lAems~kg~L~~~dy~ea~~aI~ee--~~d~~~G~v~g~~~  187 (261)
T KOG1377|consen  123 GVPGRGIIKGLNRKLLK----------DHGEGGVLL---LAELSSKGSLITGDYTEAATAIAEE--DIDFVNGFVAGSIV  187 (261)
T ss_pred             CcccchHHHHHhhhccc----------cCCCCceEE---EEEeccCCceeehhHHHHHHHHHHh--hhchheeEEeeeee
Confidence            54422      111000          000 11121   1224889999999955555555544  22222334445444


Q ss_pred             EEeCc
Q 028297          184 VVGLP  188 (211)
Q Consensus       184 ~~~~~  188 (211)
                      ..++.
T Consensus       188 ~ldrq  192 (261)
T KOG1377|consen  188 ALDRQ  192 (261)
T ss_pred             eccHH
Confidence            44443

>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional

Probab=88.89  E-value=5.7  Score=34.45  Aligned_cols=76  Identities=16%  Similarity=0.135  Sum_probs=50.0

Q ss_pred             CccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchH---HHHHHHHHH
Q 028297           95 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG---TLSAAVRLL  171 (211)
Q Consensus        95 gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~---Tl~~a~~~L  171 (211)
                      +.-.+|..+|+.||+|+..+..++-..++.            .+.+  ....+|++|+||-....--.   -+.-+++.|
T Consensus        10 ~~~~la~~ia~~lg~~~~~~~~~~F~dGE~------------~v~i--~~~v~g~~V~ivqs~~~~n~~l~elll~~~al   75 (301)
T PRK07199         10 GNEAAAGRLAAALGVEVGRIELHRFPDGES------------YVRL--DSPVAGRTVVLVCSLDRPDEKLLPLLFAAEAA   75 (301)
T ss_pred             CCHHHHHHHHHHhCCceeeeEEEECCCCCE------------EEEE--CCCCCCCEEEEECCCCCCcHHHHHHHHHHHHH
Confidence            345699999999999987654433323332            2332  23348999999998654222   244567788


Q ss_pred             HhCCCeEEEEEEE
Q 028297          172 ERMGAEVVECACV  184 (211)
Q Consensus       172 ~~~Ga~~V~v~~~  184 (211)
                      +++||+.+.++.-
T Consensus        76 r~~~a~~i~~ViP   88 (301)
T PRK07199         76 RELGARRVGLVAP   88 (301)
T ss_pred             HHcCCCeEEEEee
Confidence            9999998766543

>PRK03092 ribose-phosphate pyrophosphokinase; Provisional

Probab=88.88  E-value=3.7  Score=35.70  Aligned_cols=72  Identities=17%  Similarity=0.202  Sum_probs=47.3

Q ss_pred             hHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hHH---HHHHHHHHHhC
Q 028297           99 FGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---LSAAVRLLERM  174 (211)
Q Consensus        99 ~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~T---l~~a~~~L~~~  174 (211)
                      +|..+|+.||+++..+..++-..++.            .+.  .....+|++|+||-..... ...   +.-.++.++++
T Consensus         1 la~~ia~~l~~~l~~~~~~~F~DGE~------------~vr--i~~~v~g~~v~ii~s~~~p~nd~l~ell~~~~a~r~~   66 (304)
T PRK03092          1 LAEEVAKELGVEVTPTTAYDFANGEI------------YVR--FEESVRGCDAFVLQSHTAPINKWLMEQLIMIDALKRA   66 (304)
T ss_pred             CHHHHHHHhCCceeeeEEEECCCCCE------------EEE--ECCCCCCCEEEEEeCCCCCCcHHHHHHHHHHHHHHHc
Confidence            57899999999987654443333332            122  2233589999998875542 222   45678888999


Q ss_pred             CCeEEEEEEE
Q 028297          175 GAEVVECACV  184 (211)
Q Consensus       175 Ga~~V~v~~~  184 (211)
                      ||+++.++.-
T Consensus        67 ~a~~i~~ViP   76 (304)
T PRK03092         67 SAKRITVVLP   76 (304)
T ss_pred             CCCeEEEEEe
Confidence            9998776554

>PLN02369 ribose-phosphate pyrophosphokinase

Probab=88.86  E-value=3.6  Score=35.74  Aligned_cols=73  Identities=12%  Similarity=0.164  Sum_probs=47.3

Q ss_pred             chHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc--hHH--HHHHHHHHHh
Q 028297           98 VFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT--GGT--LSAAVRLLER  173 (211)
Q Consensus        98 ~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT--G~T--l~~a~~~L~~  173 (211)
                      .+|..+|+.||+++..+..++-..++.            .+.+  ....+|++|+||-.....  -..  +.-.++.+++
T Consensus         2 ~lA~~ia~~lg~~l~~~~~~~FpdGE~------------~v~i--~~~v~g~~V~iv~s~~~p~nd~l~eLl~~~~a~r~   67 (302)
T PLN02369          2 ALSQEIACYLGLELGKITIKRFADGEI------------YVQL--QESVRGCDVFLVQPTCPPANENLMELLIMIDACRR   67 (302)
T ss_pred             hHHHHHHHHhCCceeeeEEEECCCCCE------------EEEE--CCCCCCCeEEEEecCCCCcchHHHHHHHHHHHHHH
Confidence            478999999999987655443333332            2222  233489999999886522  222  4557788899


Q ss_pred             CCCeEEEEEEE
Q 028297          174 MGAEVVECACV  184 (211)
Q Consensus       174 ~Ga~~V~v~~~  184 (211)
                      +||+.+.++.-
T Consensus        68 ~~a~~i~~ViP   78 (302)
T PLN02369         68 ASAKRITAVIP   78 (302)
T ss_pred             cCCCeEEEEee
Confidence            99998755443

>PRK00934 ribose-phosphate pyrophosphokinase; Provisional

Probab=88.74  E-value=4.5  Score=34.72  Aligned_cols=76  Identities=13%  Similarity=0.165  Sum_probs=49.5

Q ss_pred             CccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchH---HHHHHHHHH
Q 028297           95 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG---TLSAAVRLL  171 (211)
Q Consensus        95 gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~---Tl~~a~~~L  171 (211)
                      +.-.+|..+|+.||+++..+..++-..++.            .+.+  ....+|++|+|+-....-..   -+.-+++.|
T Consensus         7 ~~~~la~~ia~~l~~~~~~~~~~~FpdGE~------------~v~i--~~~v~g~~v~i~~~~~~~~d~l~ell~~~~al   72 (285)
T PRK00934          7 ASQLLASEVARLLNTELALVETKRFPDGEL------------YVRI--LGEIDGEDVVIISTTYPQDENLVELLLLIDAL   72 (285)
T ss_pred             CCHHHHHHHHHHHCCceEeeEEEECCCCCE------------EEEE--CCCcCCCEEEEEeCCCCCcHHHHHHHHHHHHH
Confidence            334699999999999987765444333332            2332  23348999999886433222   244577888


Q ss_pred             HhCCCeEEEEEEE
Q 028297          172 ERMGAEVVECACV  184 (211)
Q Consensus       172 ~~~Ga~~V~v~~~  184 (211)
                      +++||+++.++.-
T Consensus        73 r~~ga~~i~~v~P   85 (285)
T PRK00934         73 RDEGAKSITLVIP   85 (285)
T ss_pred             HHcCCCeEEEEec
Confidence            9999998765543

>PRK01259 ribose-phosphate pyrophosphokinase; Provisional

Probab=88.63  E-value=5.2  Score=34.82  Aligned_cols=76  Identities=17%  Similarity=0.186  Sum_probs=48.6

Q ss_pred             CccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hHH---HHHHHHH
Q 028297           95 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---LSAAVRL  170 (211)
Q Consensus        95 gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~T---l~~a~~~  170 (211)
                      +.-.+|..+|+.||.++..+..++-..++.            .+.+  ....+|++|+||=+.... -..   +.-+++.
T Consensus         8 ~~~~la~~ia~~lg~~~~~~~~~~FpdGE~------------~vri--~~~v~g~~V~ii~s~~~~~nd~l~eLll~~~a   73 (309)
T PRK01259          8 ANPELAEKIAKYLGIPLGKASVGRFSDGEI------------SVEI--NENVRGKDVFIIQSTCAPTNDNLMELLIMIDA   73 (309)
T ss_pred             CCHHHHHHHHHHhCCceeeeEEEECCCCCE------------EEEe--CCCCCCCEEEEECCCCCCCcHHHHHHHHHHHH
Confidence            345799999999999986654333223332            2222  233489999999765332 112   4567788


Q ss_pred             HHhCCCeEEEEEEE
Q 028297          171 LERMGAEVVECACV  184 (211)
Q Consensus       171 L~~~Ga~~V~v~~~  184 (211)
                      ++++||+.+.++.-
T Consensus        74 lr~~ga~~i~lViP   87 (309)
T PRK01259         74 LKRASAGRITAVIP   87 (309)
T ss_pred             HHHcCCceEEEEee
Confidence            89999998765544

>PRK00553 ribose-phosphate pyrophosphokinase; Provisional

Probab=88.58  E-value=5.6  Score=35.03  Aligned_cols=77  Identities=13%  Similarity=0.118  Sum_probs=50.7

Q ss_pred             CCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hHH---HHHHHH
Q 028297           94 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---LSAAVR  169 (211)
Q Consensus        94 ~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~T---l~~a~~  169 (211)
                      .+.-.+|..+|+.||+++..+..++-..++.            .+.+  ....+|+.|+||-++... -..   +.-.++
T Consensus        16 ~~~~~La~~ia~~lg~~l~~~~~~~FpdGE~------------~v~i--~~~vrg~dV~ivqs~~~p~nd~l~eLll~~~   81 (332)
T PRK00553         16 SKAKKLVDSICRKLSMKPGEIVIQKFADGET------------YIRF--DESVRNKDVVIFQSTCSPVNDSLMELLIAID   81 (332)
T ss_pred             CCCHHHHHHHHHHhCCceeeeEEEECCCCCE------------EEEE--CCCCCCCEEEEEcCCCCCCchHHHHHHHHHH
Confidence            3445799999999999987654443333332            2222  333489999999886542 112   455778


Q ss_pred             HHHhCCCeEEEEEEE
Q 028297          170 LLERMGAEVVECACV  184 (211)
Q Consensus       170 ~L~~~Ga~~V~v~~~  184 (211)
                      .|+++||+.+.++.-
T Consensus        82 alr~~~a~~i~~ViP   96 (332)
T PRK00553         82 ALKRGSAKSITAILP   96 (332)
T ss_pred             HHHHcCCCeEEEEee
Confidence            889999998766554

>PRK02269 ribose-phosphate pyrophosphokinase; Provisional

Probab=88.53  E-value=6.6  Score=34.36  Aligned_cols=76  Identities=14%  Similarity=0.171  Sum_probs=49.6

Q ss_pred             CccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc----hHHHHHHHHH
Q 028297           95 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT----GGTLSAAVRL  170 (211)
Q Consensus        95 gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT----G~Tl~~a~~~  170 (211)
                      +.-.+|..+|+.||+++..+..++-..++.            .+.+  ....+|++|+||-.....    =--+.-+++.
T Consensus        13 ~~~~la~~ia~~lg~~l~~~~~~~FpdGE~------------~v~i--~~~vrg~dV~iv~s~~~~~nd~lmelll~~~a   78 (320)
T PRK02269         13 SNKELAEKVAQEIGIELGKSSVRQFSDGEI------------QVNI--EESIRGHHVFILQSTSSPVNDNLMEILIMVDA   78 (320)
T ss_pred             CCHHHHHHHHHHhCCceeeeEEEECCCCCE------------EEEE--CCCCCCCEEEEEecCCCCccchHHHHHHHHHH
Confidence            345799999999999887654433333332            2222  333489999999875431    1225567788


Q ss_pred             HHhCCCeEEEEEEE
Q 028297          171 LERMGAEVVECACV  184 (211)
Q Consensus       171 L~~~Ga~~V~v~~~  184 (211)
                      |+++||+++.++.-
T Consensus        79 lr~~~a~~i~~V~P   92 (320)
T PRK02269         79 LKRASAESINVVMP   92 (320)
T ss_pred             HHHhCCCeEEEEEe
Confidence            89999998865544

>PRK04923 ribose-phosphate pyrophosphokinase; Provisional

Probab=87.45  E-value=7.7  Score=33.97  Aligned_cols=82  Identities=20%  Similarity=0.181  Sum_probs=50.7

Q ss_pred             EEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchH----H
Q 028297           88 VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG----T  163 (211)
Q Consensus        88 ~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~----T  163 (211)
                      .|++- .+.-.+|..+|+.||+|+..+..++-..++.            .+.+  ....+|++|+||-+......    =
T Consensus         8 ~i~~g-~~~~~La~~ia~~lg~~l~~~~~~~FpdGE~------------~v~i--~~~v~g~~V~iiqs~~~p~nd~lme   72 (319)
T PRK04923          8 LVFSG-NANKPLAQSICKELGVRMGKALVTRFSDGEV------------QVEI--EESVRRQEVFVIQPTCAPSAENLME   72 (319)
T ss_pred             EEEEC-CCCHHHHHHHHHHhCCceeeeEEEECCCCCE------------EEEE--CCCcCCCeEEEEecCCCCCchHHHH
Confidence            34443 3335799999999999987654433333332            2232  33348999999966433211    2


Q ss_pred             HHHHHHHHHhCCCeEEEEEEE
Q 028297          164 LSAAVRLLERMGAEVVECACV  184 (211)
Q Consensus       164 l~~a~~~L~~~Ga~~V~v~~~  184 (211)
                      +.-+++.|+++||+++.++.-
T Consensus        73 Ll~~~~alr~~~a~~i~~ViP   93 (319)
T PRK04923         73 LLVLIDALKRASAASVTAVIP   93 (319)
T ss_pred             HHHHHHHHHHcCCcEEEEEee
Confidence            345677888999998775543

>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]

Probab=87.10  E-value=3.4  Score=36.09  Aligned_cols=74  Identities=15%  Similarity=0.170  Sum_probs=50.1

Q ss_pred             cchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchH----HHHHHHHHHH
Q 028297           97 FVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG----TLSAAVRLLE  172 (211)
Q Consensus        97 ~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~----Tl~~a~~~L~  172 (211)
                      -.+|+.+|+.|+.|+.....++-..++              +.+......+|+.|.|+........    -+.-.+++++
T Consensus        14 ~~La~~ia~~l~~~l~~~~~~rF~DGE--------------~~V~i~EsVrg~dVfI~qs~~~pvnd~lmELLi~idA~k   79 (314)
T COG0462          14 PELAEKIAKRLGIPLGKVEVKRFPDGE--------------IYVRIEESVRGKDVFIIQSTSPPVNDNLMELLIMIDALK   79 (314)
T ss_pred             HHHHHHHHHHhCCCcccceeEEcCCCc--------------EEEEecccccCCeEEEEeCCCCCcCHHHHHHHHHHHHHH
Confidence            368999999999998765433322232              2222344459999998887766433    2344678889


Q ss_pred             hCCCeEEEEEEE
Q 028297          173 RMGAEVVECACV  184 (211)
Q Consensus       173 ~~Ga~~V~v~~~  184 (211)
                      .+||++|.++.-
T Consensus        80 ~asA~~It~ViP   91 (314)
T COG0462          80 RASAKRITAVIP   91 (314)
T ss_pred             hcCCceEEEEee
Confidence            999998876654

>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase

Probab=86.09  E-value=9.2  Score=33.17  Aligned_cols=76  Identities=14%  Similarity=0.199  Sum_probs=47.3

Q ss_pred             CccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEE-eccccc-hH---HHHHHHH
Q 028297           95 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVI-DDLVAT-GG---TLSAAVR  169 (211)
Q Consensus        95 gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIV-DDiitT-G~---Tl~~a~~  169 (211)
                      +.-.+|..+|+.||.++..+..++-..++.            .+.+  ....+|+.|+|| -..... -.   =+.-+++
T Consensus         8 ~~~~la~~ia~~lg~~~~~~~~~~FpdGE~------------~v~i--~~~v~g~~v~iv~~s~~~~~~~~l~el~~~~~   73 (308)
T TIGR01251         8 SNQELAQKVAKNLGLPLGDVEVKRFPDGEL------------YVRI--NESVRGKDVFIIQQSTSAPVNDNLMELLIMID   73 (308)
T ss_pred             CCHHHHHHHHHHhCCeeeeeEEEECCCCCE------------EEEE--CCCCCCCeEEEEeCCCCCCccHHHHHHHHHHH
Confidence            334699999999999987754433223332            2232  233489999998 554321 11   3455678


Q ss_pred             HHHhCCCeEEEEEEE
Q 028297          170 LLERMGAEVVECACV  184 (211)
Q Consensus       170 ~L~~~Ga~~V~v~~~  184 (211)
                      .++++||+++.++.-
T Consensus        74 a~r~~ga~~i~~v~P   88 (308)
T TIGR01251        74 ALKRASAKSITAVIP   88 (308)
T ss_pred             HHHHcCCCeEEEEEE
Confidence            888999988755544

In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.

>PRK02458 ribose-phosphate pyrophosphokinase; Provisional

Probab=83.58  E-value=17  Score=31.82  Aligned_cols=77  Identities=17%  Similarity=0.195  Sum_probs=49.1

Q ss_pred             CCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hHH---HHHHHH
Q 028297           94 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---LSAAVR  169 (211)
Q Consensus        94 ~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~T---l~~a~~  169 (211)
                      .+.-.+|..+|+.||+++..+..++-..++.            .+.+  ....+|+.|+||-..... -..   +.-.++
T Consensus        16 ~~~~~la~~ia~~lg~~l~~~~~~~FpdGE~------------~v~i--~~~v~g~dV~ii~s~~~~~nd~l~eLll~~~   81 (323)
T PRK02458         16 NSNLEIAEKIAQAAGVPLGKLSSRQFSDGEI------------MINI--EESVRGDDIYIIQSTSFPVNDHLWELLIMID   81 (323)
T ss_pred             CCCHHHHHHHHHHhCCceeeeEEEECCCCCE------------EEEe--cCCcCCCeEEEEecCCCCCchHHHHHHHHHH
Confidence            3445799999999999986654333333332            2222  333489999999875322 222   344667


Q ss_pred             HHHhCCCeEEEEEEE
Q 028297          170 LLERMGAEVVECACV  184 (211)
Q Consensus       170 ~L~~~Ga~~V~v~~~  184 (211)
                      .|+++||+.+.++.-
T Consensus        82 alr~~~a~~i~lViP   96 (323)
T PRK02458         82 ACKRASANTVNVVLP   96 (323)
T ss_pred             HHHHcCCceEEEEEe
Confidence            888999988766554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	211
2dy0_A	190	Crystal Structure Of Project Jw0458 From Escherichi		2e-42
1ore_A	180	Human Adenine Phosphoribosyltransferase Length = 18		2e-27
1g2q_A	187	Crystal Structure Of Adenine Phosphoribosyltransfer		3e-21
1mzv_A	235	Crystal Structure Of Adenine Phosphoribosyltransfer		4e-18
1l1q_A	186	Crystal Structure Of Aprtase From Giardia Lamblia C		3e-16
1qb7_A	236	Crystal Structures Of Adenine Phosphoribosyltransfe		5e-16
1o57_A	291	Crystal Structure Of The Purine Operon Repressor Of		4e-04
1p4a_A	285	Crystal Structure Of The Purr Complexed With Cprpp		4e-04
1u9y_A	284	Crystal Structure Of Phosphoribosyl Diphosphate Syn		6e-04

>pdb|2DY0|A Chain A, Crystal Structure Of Project Jw0458 From Escherichia Coli Length = 190

Iteration: 1
 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/150 (52%), Positives = 114/150 (76%), Gaps = 2/150 (1%)
Query: 48  QIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAI 107
           Q +   GI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EARGF+FG  +AL +
Sbjct: 26  QDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGL 85
Query: 108 GAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAA 167
           G  FVP+RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+DDL+ATGGT+ A 
Sbjct: 86  GVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEAT 145
Query: 168 VRLLERMGAEVVECACVVGLPE--GQRRLD 195
           V+L+ R+G EV + A ++ L +  G++RL+
Sbjct: 146 VKLIRRLGGEVADAAFIINLFDLGGEQRLE 175

>pdb|1ORE|A Chain A, Human Adenine Phosphoribosyltransferase Length = 180

Iteration: 1
 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 100/156 (64%), Gaps = 5/156 (3%)
Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMG---ISVVAGIEARGFVFGPSIALAIGAK 110
           G++F+DI+ +L D  +F+  + +     +      I  +AG+++RGF+FGPS+A  +G  
Sbjct: 23  GVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG 82
Query: 111 FVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRL 170
            V +RK  KLPG  +  +Y LEYG   LE+   A+EPG+R +V+DDL+ATGGT++AA  L
Sbjct: 83  CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACEL 142
Query: 171 LERMGAEVVECACVVGLP--EGQRRLDGKPLYILVE 204
           L R+ AEV+EC  +V L   +G+ +L   P + L++
Sbjct: 143 LGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQ 178

>pdb|1G2Q|A Chain A, Crystal Structure Of Adenine Phosphoribosyltransferase Length = 187

Iteration: 1
 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 99/160 (61%), Gaps = 7/160 (4%)
Query: 50  WWAAGIMFQDITTLLLDHKAFKDTVDIFV----DRYRDMGISVVAGIEARGFVFGPSIAL 105
           + + GI+F+D   +  +   F+  +D F     + + ++ I  + G+E+RGF+FGP++AL
Sbjct: 20  FPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLAL 79
Query: 106 AIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLS 165
           A+G  FVP+RK  KLPGE     Y  EYG+D  E+   AI  G   +++DD++ATGG+ +
Sbjct: 80  ALGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAA 139
Query: 166 AAVRLLERMGAEVVECACVVGLP--EGQRRLDGKPLYILV 203
           AA  L+E++ A ++E   V+ L   +G+ +L+  P++ L+
Sbjct: 140 AAGELVEQLEANLLEYNFVMELDFLKGRSKLNA-PVFTLL 178

>pdb|1MZV|A Chain A, Crystal Structure Of Adenine Phosphoribosyltransferase (Aprt) From Leishmania Tarentolae Length = 235

Iteration: 1
 Score = 87.8 bits (216), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 57  FQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPL 114
           F D++++    +  K   D  V+RYR M    + + G +ARGF+FGP IA+ +G  FV +
Sbjct: 42  FADVSSITESPETLKAIRDFLVERYRTMSPAPTHILGFDARGFLFGPMIAVELGIPFVLM 101
Query: 115 RKPNKLPGEVI-SEAYVLEY---GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRL 170
           RK +K  G +I SE Y  EY     + + +  G+I    R ++IDD++ATGGT  + ++L
Sbjct: 102 RKADKNAGLLIRSEPYEKEYKEAAPEVMTIRHGSIGKNSRVVLIDDVLATGGTALSGLQL 161
Query: 171 LERMGAEVVECACVVGLP 188
           +E  GAEVVE   ++ +P
Sbjct: 162 VEASGAEVVEMVSILTIP 179

>pdb|1L1Q|A Chain A, Crystal Structure Of Aprtase From Giardia Lamblia Complexed With 9- Deazaadenine Length = 186

Iteration: 1
 Score = 81.3 bits (199), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 50  WWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGA 109
           +   GI F+D++ +L    A           Y+D+ I+ V GIE+RGF+ G  +A ++G 
Sbjct: 18  FPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGV 77
Query: 110 KFVPLRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAV 168
            FV LRK  KLPG+V    + +EY     +E+    + P +  L+ DD++ATGGTL AA+
Sbjct: 78  GFVALRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAI 137
Query: 169 RLLERMGAE 177
            L E  G +
Sbjct: 138 ELCETAGVK 146

>pdb|1QB7|A Chain A, Crystal Structures Of Adenine Phosphoribosyltransferase From Leishmania Donovani. Length = 236

Iteration: 1
 Score = 80.9 bits (198), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 6/138 (4%)
Query: 57  FQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPL 114
           F D++++    +  K   D  V RYR M    + + G +ARGF+FGP IA+ +   FV +
Sbjct: 41  FADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPFVLM 100
Query: 115 RKPNKLPGEVI-SEAYVLEY---GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRL 170
           RK +K  G +I SE Y  EY     + + +  G+I  G R ++IDD++ATGGT  + ++L
Sbjct: 101 RKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQL 160
Query: 171 LERMGAEVVECACVVGLP 188
           +E   A VVE   ++ +P
Sbjct: 161 VEASDAVVVEMVSILSIP 178

>pdb|1O57|A Chain A, Crystal Structure Of The Purine Operon Repressor Of Bacillus Subtilis Length = 291

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 76  IFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP-GEVISEAYVLEYG 134
           +F   + +  I VV  +  +G     + A  +    V +RK NK+  G  +S  YV    
Sbjct: 121 LFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYV-SGS 179
Query: 135 TDRLE---MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 185
           ++R++   +   +++ G   L+IDD +  GGT++  + LL+   A V     +V
Sbjct: 180 SNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLV 233

>pdb|1P4A|A Chain A, Crystal Structure Of The Purr Complexed With Cprpp Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 76  IFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP-GEVISEAYVLEYG 134
           +F   + +  I VV  +  +G     + A  +    V +RK NK+  G  +S  YV    
Sbjct: 121 LFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYV-SGS 179
Query: 135 TDRLE---MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 185
           ++R++   +   +++ G   L+IDD +  GGT++  + LL+   A V     +V
Sbjct: 180 SNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLV 233

>pdb|1U9Y|A Chain A, Crystal Structure Of Phosphoribosyl Diphosphate Synthase From Methanocaldococcus Jannaschii Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 152 LVIDDLVATGGTLSAAVRLLERMGAEVVECACV 184
            ++DD+++TGGT++ AV+LL+  GA+ +  ACV
Sbjct: 209 FIVDDIISTGGTMATAVKLLKEQGAKKIIAACV 241

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	211
2dy0_A	190	APRT, adenine phosphoribosyltransferase; structura	1e-85
1zn8_A	180	APRT, adenine phosphoribosyltransferase; glycosylt	4e-83
1g2q_A	187	Adenine phosphoribosyltransferase 1; dimer, single	7e-81
1l1q_A	186	Adenine phosphoribosyltransferase; aprtase, giardi	2e-77
1qb7_A	236	APRT, adenine phosphoribosyltransferase; dinucleot	8e-77
1o57_A	291	PUR operon repressor; purine operon repressor, hel	4e-56
1y0b_A	197	Xanthine phosphoribosyltransferase; purine metabol	1e-48
1vch_A	175	Phosphoribosyltransferase-related protein; structu	4e-33
2p1z_A	180	Phosphoribosyltransferase; STRU genomics, PSI-2, p	4e-14
2aee_A	211	OPRT, oprtase, orotate phosphoribosyltransferase;	5e-13
2wns_A	205	Orotate phosphoribosyltransferase; alternative spl	2e-12
3m3h_A	234	OPRT, oprtase, orotate phosphoribosyltransferase;	2e-12
3dez_A	243	OPRT, oprtase, orotate phosphoribosyltransferase;	2e-12
3qw4_B	453	UMP synthase; N-terminal orotidine monophosphate d	1e-11
2yzk_A	178	OPRT, oprtase, orotate phosphoribosyltransferase;	1e-10
2ps1_A	226	Orotate phosphoribosyltransferase 1; alpha beta, o	1e-08
3mjd_A	232	Orotate phosphoribosyltransferase; IDP02311, csgid	3e-07
1lh0_A	213	OMP synthase; loop closure, monomer closure, orota	2e-06
3n2l_A	238	OPRT, oprtase, orotate phosphoribosyltransferase;	6e-06
1vdm_A	153	Purine phosphoribosyltransferase; structural genom	6e-06
1wd5_A	208	Hypothetical protein TT1426; structural genomics,	7e-06
1u9y_A	284	RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy	2e-05
1dku_A	317	Protein (phosphoribosyl pyrophosphate synthetase);	3e-05
3lrt_A	286	Ribose-phosphate pyrophosphokinase; phosphoribosyl	3e-05
2xbu_A	221	Hypoxanthine-guanine phosphoribosyltransferase; gl	6e-05
3dah_A	319	Ribose-phosphate pyrophosphokinase; pyrophosphoki	7e-05
3s5j_B	326	Ribose-phosphate pyrophosphokinase 1; nucleotide s	1e-04
2ji4_A	379	Phosphoribosyl pyrophosphate synthetase-associated	3e-04

>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12} Length = 190

 Score =  250 bits (640), Expect = 1e-85
 Identities = 81/155 (52%), Positives = 116/155 (74%), Gaps = 4/155 (2%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GI+F+D+T+LL D KA+  ++D+ V+RY++ GI+ V G EARGF+FG  +AL +G  FVP
Sbjct: 32  GILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVP 91

Query: 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
           +RKP KLP E ISE Y LEYGTD+LE+HV AI+PG++ LV+DDL+ATGGT+ A V+L+ R
Sbjct: 92  VRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRR 151

Query: 174 MGAEVVECACVVGLPE--GQRRLDGK--PLYILVE 204
           +G EV + A ++ L +  G++RL+ +    Y LV 
Sbjct: 152 LGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVP 186

>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A* Length = 180

 Score =  243 bits (623), Expect = 4e-83
 Identities = 63/156 (40%), Positives = 99/156 (63%), Gaps = 5/156 (3%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMG---ISVVAGIEARGFVFGPSIALAIGAK 110
           G++F+DI+ +L D  +F+  + +     +      I  +AG+++RGF+FGPS+A  +G  
Sbjct: 23  GVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG 82

Query: 111 FVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRL 170
            V +RK  KLPG  +  +Y LEYG   LE+   A+EPG+R +V+DDL+ATGGT++AA  L
Sbjct: 83  CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACEL 142

Query: 171 LERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE 204
           L R+ AEV+EC  +V L    G+ +L   P + L++
Sbjct: 143 LGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQ 178

>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A Length = 187

 Score =  238 bits (609), Expect = 7e-81
 Identities = 57/157 (36%), Positives = 96/157 (61%), Gaps = 7/157 (4%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFV----DRYRDMGISVVAGIEARGFVFGPSIALAIGA 109
           GI+F+D   +  +   F+  +D F     + + ++ I  + G+E+RGF+FGP++ALA+G 
Sbjct: 24  GILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGV 83

Query: 110 KFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVR 169
            FVP+RK  KLPGE     Y  EYG+D  E+   AI  G   +++DD++ATGG+ +AA  
Sbjct: 84  GFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGE 143

Query: 170 LLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE 204
           L+E++ A ++E   V+ L    G+ +L+  P++ L+ 
Sbjct: 144 LVEQLEANLLEYNFVMELDFLKGRSKLNA-PVFTLLN 179

>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A* Length = 186

 Score =  229 bits (586), Expect = 2e-77
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 7/158 (4%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GI F+D++ +L    A           Y+D+ I+ V GIE+RGF+ G  +A ++G  FV 
Sbjct: 22  GIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVA 81

Query: 114 LRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLE 172
           LRK  KLPG+V    + +EY     +E+    + P +  L+ DD++ATGGTL AA+ L E
Sbjct: 82  LRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCE 141

Query: 173 RMGA--EVVECACVVGLPE--GQRRLDGK--PLYILVE 204
             G   E +    +  +    G+ ++  K   L+ ++ 
Sbjct: 142 TAGVKPENIYINVLYEIEALKGREKVGQKCTRLFSVIR 179

>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A* Length = 236

 Score =  229 bits (586), Expect = 8e-77
 Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 10/161 (6%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYR--DMGISVVAGIEARGFVFGPSIALAIGAKF 111
              F D++++    +  K   D  V RYR      + + G +ARGF+FGP IA+ +   F
Sbjct: 38  VPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPF 97

Query: 112 VPLRKPNKLPGEVI-SEAYVLEYG---TDRLEMHVGAIEPGERALVIDDLVATGGTLSAA 167
           V +RK +K  G +I SE Y  EY     + + +  G+I  G R ++IDD++ATGGT  + 
Sbjct: 98  VLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSG 157

Query: 168 VRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVE 204
           ++L+E   A VVE   ++ +P      ++       Y  ++
Sbjct: 158 LQLVEASDAVVVEMVSILSIPFLKAAEKIHSTANSRYKDIK 198

>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A* Length = 291

 Score =  179 bits (455), Expect = 4e-56
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 5/153 (3%)

Query: 57  FQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRK 116
           +  +T +L           +F   + +  I VV  +  +G     + A  +    V +RK
Sbjct: 102 YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRK 161

Query: 117 PNKLP-GEVISEAYVLEY--GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
            NK+  G  +S  YV         + +   +++ G   L+IDD +  GGT++  + LL+ 
Sbjct: 162 DNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDE 221

Query: 174 MGAEVVECACVVGLP--EGQRRLDGKPLYILVE 204
             A V     +V     + +   +   L  L  
Sbjct: 222 FNANVAGIGVLVEAEGVDERLVDEYMSLLTLST 254

>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A* Length = 197

 Score =  156 bits (397), Expect = 1e-48
 Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 15/166 (9%)

Query: 54  GIMFQDITTLL-------LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALA 106
           G++  D    +       +D    +   D F  R+   GI+ +  IE+ G        L 
Sbjct: 15  GVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLK 74

Query: 107 IGAKFVPLRKPNKLPGE----VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG 162
           +G   V  RK   L         S     +    ++ +    +   +  L+IDD +A G 
Sbjct: 75  LGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQ 134

Query: 163 TLSAAVRLLERMGAEVVECACVVGLP--EGQRRLD--GKPLYILVE 204
                V ++++ GA +     V+      G+  L   G  +  L  
Sbjct: 135 AAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLAR 180

>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1 Length = 175

 Score =  115 bits (291), Expect = 4e-33
 Identities = 24/147 (16%), Positives = 47/147 (31%), Gaps = 6/147 (4%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
                 +   L D +  +   +            ++   E         +A A+G  +V 
Sbjct: 22  PGRRIPLVEFLGDPEFTRAAAEALRPLV-PKEAEILFTTETSPIPLTHVLAEALGLPYVV 80

Query: 114 LRKPNKLPGEVISEAYVLEYGTDR-----LEMHVGAIEPGERALVIDDLVATGGTLSAAV 168
            R+  +   E      V            L+         +R +++ D+VA+G T+ A  
Sbjct: 81  ARRRRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAME 140

Query: 169 RLLERMGAEVVECACVVGLPEGQRRLD 195
           +++ R G  VV    V         +D
Sbjct: 141 KMVLRAGGHVVARLAVFRQGTPGLAVD 167

>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae} Length = 180

 Score = 66.5 bits (163), Expect = 4e-14
 Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 20/131 (15%)

Query: 59  DITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL---R 115
           D+    L  +A +   ++  +   D     V G+         S+  A G + +     R
Sbjct: 37  DLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADG-REIHAFVVR 95

Query: 116 KPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERM 174
           K  K            ++G   R+E   G    G++ LV++D   TG +   AV+ L   
Sbjct: 96  KEAK------------KHGMQRRIE---GPDVVGKKVLVVEDTTTTGNSPLTAVKALREA 140

Query: 175 GAEVVECACVV 185
           GAEVV  A VV
Sbjct: 141 GAEVVGVATVV 151

>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1 Length = 211

 Score = 64.3 bits (157), Expect = 5e-13
 Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 23/162 (14%)

Query: 51  WAAGIM---FQDITTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIAL 105
           WA+GI    + D    L   K      + FV+  +       V+AG    G   G  IA 
Sbjct: 29  WASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIAD 88

Query: 106 AIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLS 165
            +   F  +R   K            ++G        G +  G++ ++I+DL++TGG++ 
Sbjct: 89  KMTLPFAYIRSKPK------------DHGAGNQI--EGRVLKGQKMVIIEDLISTGGSVL 134

Query: 166 AAVRLLERMGAEVVECACVV--GLPEGQRRLD--GKPLYILV 203
            A     R GA+V+    +    LP+  +     G  L  L 
Sbjct: 135 DAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLS 176

>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens} Length = 205

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 19/140 (13%)

Query: 51  WAAGIM---FQDITTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIAL 105
             +G+    + D+  ++   +      DI     ++ GIS   V G+          I  
Sbjct: 23  LKSGLSSPIYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICS 82

Query: 106 AIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLS 165
                 +  RK  K            +YGT RL    G I PGE  L+I+D+V +G ++ 
Sbjct: 83  TNQIPMLIRRKETK------------DYGTKRLV--EGTINPGETCLIIEDVVTSGSSVL 128

Query: 166 AAVRLLERMGAEVVECACVV 185
             V +L++ G +V +   ++
Sbjct: 129 ETVEVLQKEGLKVTDAIVLL 148

>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A* Length = 234

 Score = 63.3 bits (154), Expect = 2e-12
 Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 18/140 (12%)

Query: 59  DITTLLLDHKAFKDTVDIFVDRYRD--MGISVVAGIEARGFVFGPSIALAIGAKFVPLRK 116
           D    L   K  +       +  ++    + V+AG    G      ++  +      +R 
Sbjct: 60  DNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRS 119

Query: 117 PNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGA 176
             K             +G        G  E G++ +V++DL++TGG+    V  L   G 
Sbjct: 120 KAK------------GHGKGNQI--EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGC 165

Query: 177 EVVECACVV--GLPEGQRRL 194
           EV+    +    L  G+ +L
Sbjct: 166 EVLGIVSIFTYELEAGKEKL 185

>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans} Length = 243

 Score = 62.9 bits (153), Expect = 2e-12
 Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 20/151 (13%)

Query: 59  DITTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIALAIGAKFVPLRK 116
           D    L   +      + FV+  ++      V+AG    G   G  IA  +      +R 
Sbjct: 72  DNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRS 131

Query: 117 PNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGA 176
             K            ++G        G +  G++ ++I+DL++TGG++  AV   +R GA
Sbjct: 132 KPK------------DHGAGNQI--EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGA 177

Query: 177 EVVECACVV--GLPEGQRRLD--GKPLYILV 203
           +V+    +    LP+     +     L  L 
Sbjct: 178 DVLGVVAIFTYELPKATANFEKASVKLVTLS 208

>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani} Length = 453

 Score = 62.1 bits (151), Expect = 1e-11
 Identities = 29/127 (22%), Positives = 47/127 (37%), Gaps = 14/127 (11%)

Query: 59  DITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPN 118
           D+  L+      +     +    R      +AG+         +I+  +    +  R+  
Sbjct: 290 DLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRREA 349

Query: 119 KLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEV 178
           K             YGT       G  + G+R ++IDDLV+TG T   A+  L   G EV
Sbjct: 350 K------------IYGTKAAI--EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEV 395

Query: 179 VECACVV 185
           V    +V
Sbjct: 396 VSIVVLV 402

>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix} Length = 178

 Score = 56.9 bits (138), Expect = 1e-10
 Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 26/143 (18%)

Query: 51  WAAGIM---FQDITTLLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIAL 105
            ++G     + D+  LL D  ++   +D+ ++           V G+   G  +   +AL
Sbjct: 19  LSSGRRSSVYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLAL 78

Query: 106 AIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIE---PGERALVIDDLVATGG 162
            +      +R   K             +GT         +E   P  R +V+DD+  TG 
Sbjct: 79  RLSKPLGYVRPERK------------GHGTLSQ------VEGDPPKGRVVVVDDVATTGT 120

Query: 163 TLSAAVRLLERMGAEVVECACVV 185
           +++ ++ +L   G  V     +V
Sbjct: 121 SIAKSIEVLRSNGYTVGTALVLV 143

>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A* Length = 226

 Score = 52.2 bits (125), Expect = 1e-08
 Identities = 16/103 (15%), Positives = 39/103 (37%), Gaps = 5/103 (4%)

Query: 83  DMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHV 142
           D+   V+ G   +G      + + +        +  +      +     ++G   +   V
Sbjct: 65  DLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQY---AFNRKEAKDHGEGGII--V 119

Query: 143 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 185
           G+    +R L+IDD++  G  ++ A  ++     +VV     +
Sbjct: 120 GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIAL 162

>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis} Length = 232

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 98  VFGP---SIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVI 154
           +FGP    I L      V   K N             ++G   +   VGA    ++ L+I
Sbjct: 85  LFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKDHGEGGVF--VGADMTNKKVLLI 142

Query: 155 DDLVATGGTLSAAVRLLERMGAEVVECACVV 185
           DD++  G     +   L+ + A++      +
Sbjct: 143 DDVMTAGTAFYESYNKLKIINAKIAGVVLSI 173

>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A Length = 213

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 17/125 (13%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 63  LLLDHKAFKDTVDIFVDRYRDMGIS--VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL 120
           L    +        + +   D GI   ++ G   +G     + A+A+            L
Sbjct: 39  LFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHH-----DKDL 93

Query: 121 PGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180
           P    +     ++G       +       R +++DD++  G  +  ++ +++  GA +  
Sbjct: 94  PY-CFNRKEAKDHGEGGS---LVGSALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAG 149

Query: 181 CACVV 185
               +
Sbjct: 150 VLISL 154

>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae} Length = 238

 Score = 44.5 bits (105), Expect = 6e-06
 Identities = 13/103 (12%), Positives = 36/103 (34%), Gaps = 9/103 (8%)

Query: 83  DMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHV 142
            +   V+ G   +G     + A+A+             P     +     +G       +
Sbjct: 86  GIEFDVLFGPAYKGIPIATTTAVALADHH-----DVDTPYCFNRKE-AKNHGEGGN---L 136

Query: 143 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 185
              +   R +++DD++  G  +  ++ L++   A++      +
Sbjct: 137 VGSKLEGRVMLVDDVITAGTAIRESMELIQANKADLAGVLVAI 179

>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1 Length = 153

 Score = 43.4 bits (103), Expect = 6e-06
 Identities = 13/48 (27%), Positives = 27/48 (56%)

Query: 148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLD 195
            +R +++DD+  TG TL   +  ++++GA+ ++ AC+   P      D
Sbjct: 83  DKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWTSVVPD 130

>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1 Length = 208

 Score = 44.2 bits (104), Expect = 7e-06
 Identities = 17/49 (34%), Positives = 26/49 (53%)

Query: 148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDG 196
           G   +++DD VATG ++ AA+ ++ + G   V  A  V  PE   RL  
Sbjct: 120 GRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLKA 168

>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A* Length = 284

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 140 MHV-GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 183
                  +      ++DD+++TGGT++ AV+LL+  GA+ +  AC
Sbjct: 197 APKTLDAK-DRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAAC 240

>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A* Length = 317

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)

Query: 140 MHV-GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 183
           M++ G IE G+ A++IDD++ T GT++ A   L   GA+ V   C
Sbjct: 209 MNIVGNIE-GKTAILIDDIIDTAGTITLAANALVENGAKEVYACC 252

>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A* Length = 286

 Score = 42.5 bits (101), Expect = 3e-05
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 140 MHV-GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 183
                 +  G++ L++DD+++TGGT++ +  LL   GA  +  + 
Sbjct: 195 KVPNVDVN-GKKLLIVDDIISTGGTIAKSSGLLREKGASKIYVSA 238

>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A* Length = 221

 Score = 41.7 bits (97), Expect = 6e-05
 Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 5/139 (3%)

Query: 58  QDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKP 117
           Q         K FK  + I +      G  + A I            + I A  + L + 
Sbjct: 16  QLCQVSAERIKNFKPDLIIAIGG----GGFIPARILRTFLKEPGVPTIRIFAIILSLYED 71

Query: 118 NKLPGEVISEAYVLEYGTDRLEMHVGAIEP-GERALVIDDLVATGGTLSAAVRLLERMGA 176
               G  + E  V    T  ++     ++  G+  L++D++  T  TL  A+  LE+  A
Sbjct: 72  LNSVGSEVEEVGVKVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAA 131

Query: 177 EVVECACVVGLPEGQRRLD 195
           E  +   +      + + +
Sbjct: 132 EQAKAKGIDTEKSPEMKTN 150

>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei} Length = 319

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 140 MHV-GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 183
           M++ G +E G   +++DD+V T GTL  A ++L+  GA+ V    
Sbjct: 208 MNIIGEVE-GRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYA 251

>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A Length = 326

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 140 MH-VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 183
           M  VG ++    A+++DD+  T GT+  A   L   GA  V    
Sbjct: 205 MVLVGDVK-DRVAILVDDMADTCGTICHAADKLLSAGATRVYAIL 248

>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* Length = 379

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 3/46 (6%)

Query: 139 EMH-VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGA-EVVECA 182
            +  VG +  G  A+++DD++    +  AA   L+  GA ++   A
Sbjct: 263 PITVVGDVG-GRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMA 307

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	211
3s5j_B	326	Ribose-phosphate pyrophosphokinase 1; nucleotide s	100.0
3dah_A	319	Ribose-phosphate pyrophosphokinase; pyrophosphoki	100.0
1u9y_A	284	RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy	99.98
1dku_A	317	Protein (phosphoribosyl pyrophosphate synthetase);	99.98
3lrt_A	286	Ribose-phosphate pyrophosphokinase; phosphoribosyl	99.98
2ji4_A	379	Phosphoribosyl pyrophosphate synthetase-associated	99.97
2dy0_A	190	APRT, adenine phosphoribosyltransferase; structura	99.97
1zn8_A	180	APRT, adenine phosphoribosyltransferase; glycosylt	99.97
1g2q_A	187	Adenine phosphoribosyltransferase 1; dimer, single	99.97
1qb7_A	236	APRT, adenine phosphoribosyltransferase; dinucleot	99.97
1l1q_A	186	Adenine phosphoribosyltransferase; aprtase, giardi	99.96
3m3h_A	234	OPRT, oprtase, orotate phosphoribosyltransferase;	99.93
3dez_A	243	OPRT, oprtase, orotate phosphoribosyltransferase;	99.93
2p1z_A	180	Phosphoribosyltransferase; STRU genomics, PSI-2, p	99.92
2yzk_A	178	OPRT, oprtase, orotate phosphoribosyltransferase;	99.92
2wns_A	205	Orotate phosphoribosyltransferase; alternative spl	99.92
1y0b_A	197	Xanthine phosphoribosyltransferase; purine metabol	99.92
3mjd_A	232	Orotate phosphoribosyltransferase; IDP02311, csgid	99.91
1o57_A	291	PUR operon repressor; purine operon repressor, hel	99.91
1lh0_A	213	OMP synthase; loop closure, monomer closure, orota	99.91
1vch_A	175	Phosphoribosyltransferase-related protein; structu	99.91
2aee_A	211	OPRT, oprtase, orotate phosphoribosyltransferase;	99.9
3n2l_A	238	OPRT, oprtase, orotate phosphoribosyltransferase;	99.9
3qw4_B	453	UMP synthase; N-terminal orotidine monophosphate d	99.89
2ps1_A	226	Orotate phosphoribosyltransferase 1; alpha beta, o	99.89
3hvu_A	204	Hypoxanthine phosphoribosyltransferase; hypoxanthi	99.8
1vdm_A	153	Purine phosphoribosyltransferase; structural genom	99.79
1hgx_A	183	HGXPRTASE, hypoxanthine-guanine-xanthine phosphori	99.79
1fsg_A	233	HGPRTASE, hypoxanthine-guanine phosphoribosyltrans	99.77
1z7g_A	217	HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribos	99.75
2geb_A	185	Hypoxanthine-guanine phosphoribosyltransferase; HG	99.75
1pzm_A	211	HGPRT, hypoxanthine-guanine phosphoribosyltransfer	99.74
2jbh_A	225	Phosphoribosyltransferase domain-containing prote;	99.74
3o7m_A	186	Hypoxanthine phosphoribosyltransferase; hypoxanthi	99.73
3ozf_A	250	Hypoxanthine-guanine-xanthine phosphoribosyltrans;	99.73
1tc1_A	220	Protein (hypoxanthine phosphoribosyltransferase);	99.72
1wd5_A	208	Hypothetical protein TT1426; structural genomics,	99.72
1yfz_A	205	Hypoxanthine-guanine phosphoribosyltransferase; pr	99.72
1a3c_A	181	PYRR, pyrimidine operon regulatory protein PYRR; t	99.71
2ywu_A	181	Hypoxanthine-guanine phosphoribosyltransferase; ro	99.71
3ohp_A	177	Hypoxanthine phosphoribosyltransferase; structural	99.69
1ufr_A	181	TT1027, PYR mRNA-binding attenuation protein; pyri	99.67
1nul_A	152	XPRT, xanthine-guanine phosphoribosyltransferase;	99.66
1w30_A	201	PYRR bifunctional protein; transferase, glycosyltr	99.62
1ecf_A	504	Glutamine phosphoribosylpyrophosphate amidotransf;	99.6
2xbu_A	221	Hypoxanthine-guanine phosphoribosyltransferase; gl	99.58
3acd_A	181	Hypoxanthine-guanine phosphoribosyltransferase; ro	99.53
1ao0_A	459	Glutamine phosphoribosylpyrophosphate amidotransfe	99.52
1dqn_A	230	Guanine phosphoribosyltransferase; protein-inhibit	99.35
1o5o_A	221	Uracil phosphoribosyltransferase; TM0721, structur	99.33
1i5e_A	209	Uracil phosphoribosyltransferase; salvage pathway;	99.32
2ehj_A	208	Uracil phosphoribosyltransferase; structural genom	99.2
2e55_A	208	Uracil phosphoribosyltransferase; structural genom	99.19
1v9s_A	208	Uracil phosphoribosyltransferase; pyrimidine salva	99.14
1bd3_D	243	Uprtase, uracil phosphoribosyltransferase; glycosy	99.13
3dmp_A	217	Uracil phosphoribosyltransferase; structural genom	98.98
1xtt_A	216	Probable uracil phosphoribosyltransferase; tetrame	98.8
3dah_A	319	Ribose-phosphate pyrophosphokinase; pyrophosphoki	88.34
1u9y_A	284	RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy	86.77
3s5j_B	326	Ribose-phosphate pyrophosphokinase 1; nucleotide s	84.42

>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A

Probab=100.00  E-value=4.8e-35  Score=252.66  Aligned_cols=186  Identities=20%  Similarity=0.160  Sum_probs=146.3

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeee-e--------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLF-F--------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|||||+|||||||++.|     +|+++|||+ +              ++||++|++|+++..|+++|+.+.+++++...
T Consensus        45 ~esvrg~dV~iiqs~~~p-----~nd~lmeLl~~idA~k~asA~rIt~ViPY~~YaRQDr~~~~repisak~vA~lL~~~  119 (326)
T 3s5j_B           45 GESVRGEDVYIVQSGCGE-----INDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVA  119 (326)
T ss_dssp             CSCCTTCEEEEECCCCSC-----HHHHHHHHHHHHHHHHHTTCSEEEEEESSCTTTTCCSCTTSSCCCHHHHHHHHHHHH
T ss_pred             CCCcCCCcEEEEecCCCC-----ccHHHHHHHHHHHHHHhcCCcEEEEeccCccccccCCcCCCCCCEeHHHHHHHHHHc
Confidence            489999999999999866     899999983 3              79999999999999999999999999998643


Q ss_pred             HHHH-H---------------------HHHHHHHHHhh----cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297           68 KAFK-D---------------------TVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP  121 (211)
Q Consensus        68 ~~~~-~---------------------~~~~la~~i~~----~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~  121 (211)
                      +..+ .                     ....+++++.+    .+.++|++|+.||+.+|..+|+.|++|+.+++|+++.+
T Consensus       120 G~drvit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~  199 (326)
T 3s5j_B          120 GADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKA  199 (326)
T ss_dssp             TCSEEEEESCSSGGGGGGCSSCEEEECSHHHHHHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC----
T ss_pred             CCCEEEEEeCCChHHHhhcCCceeceEcHHHHHHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCC
Confidence            2111 0                     12333333432    23579999999999999999999999999998877544


Q ss_pred             CceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCe
Q 028297          122 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPL  199 (211)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l  199 (211)
                      +...           .+.+ .+. .+||+|+||||+++||+|+.++++.|+++||++|+++++|+.++  +.++|++.++
T Consensus       200 ~~v~-----------~~~l-~g~-v~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i  266 (326)
T 3s5j_B          200 NEVD-----------RMVL-VGD-VKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACF  266 (326)
T ss_dssp             ---C-----------CEEE-ESC-CTTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCC
T ss_pred             Ceee-----------EEec-ccc-CCCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCC
Confidence            4321           1222 245 49999999999999999999999999999999999999999876  7888876677


Q ss_pred             EEEEccc
Q 028297          200 YILVEPR  206 (211)
Q Consensus       200 ~sl~~~~  206 (211)
                      ..++..+
T Consensus       267 ~~vv~t~  273 (326)
T 3s5j_B          267 EAVVVTN  273 (326)
T ss_dssp             SEEEEET
T ss_pred             CEEEEec
Confidence            7776544

>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}

Probab=100.00  E-value=7.1e-36  Score=257.45  Aligned_cols=186  Identities=18%  Similarity=0.207  Sum_probs=142.2

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCC-CCCeeheeHHHHhcC
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWW-AAGIMFQDITTLLLD   66 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~-~~~i~~~d~~~l~~~   66 (211)
                      .|||||+|||||||++.|     +|+++|||+.               ++||++|++|+++..| +++|+.+.+++++..
T Consensus        49 ~esvrg~dV~iiqs~~~p-----~nd~lmeLl~~idA~k~asA~rIt~ViPY~~YaRQDr~~~~~r~pisak~vA~ll~~  123 (319)
T 3dah_A           49 QENVRGKDVFVLQSTCAP-----TNDNLMELMIMVDALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKVVANMLEI  123 (319)
T ss_dssp             CSCCBTCEEEEECCCCSS-----HHHHHHHHHHHHHHHHHTTBSEEEEEESSCTTTTCCSCCTTCCCCCHHHHHHHHHHH
T ss_pred             CCCcCCCeEEEEccCCCC-----CcHHHHHHHHHHHHHHHcCCcEEEEEccCccccccccccCCCCCCccHHHHHHHHHh
Confidence            489999999999999866     8999999843               7999999999999999 999999999999864


Q ss_pred             HHHHH-H---------------------HHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCC
Q 028297           67 HKAFK-D---------------------TVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG  122 (211)
Q Consensus        67 ~~~~~-~---------------------~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~  122 (211)
                      .+..+ .                     ....+++++++.  +.++|++|+.||+.+|..+|+.|++|+.+++|+++.++
T Consensus       124 ~G~d~vit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~  203 (319)
T 3dah_A          124 AGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQNYPDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKAN  203 (319)
T ss_dssp             HTCCEEEEESCSCGGGGGGCSSCEEEECCHHHHHHHHHTTCCTTEEEECCSSTTHHHHHHHHHHTTCEEEC---------
T ss_pred             cCCCEEEEEECCChHHhhhcCCceEecccHHHHHHHHHHhCCCCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCC
Confidence            32211 1                     134455555543  45799999999999999999999999998888765433


Q ss_pred             ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeE
Q 028297          123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLY  200 (211)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~  200 (211)
                      ...           .+.+ .+. .+||+|+||||+++||+|+.++++.|+++||+.|+++++|+.++  +.++|++.++.
T Consensus       204 ~v~-----------~~~i-~g~-v~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~  270 (319)
T 3dah_A          204 VAE-----------VMNI-IGE-VEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALD  270 (319)
T ss_dssp             ------------------------CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCS
T ss_pred             ceE-----------EEEc-ccc-CCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCC
Confidence            211           1222 244 48999999999999999999999999999999999999999876  88889877777


Q ss_pred             EEEccc
Q 028297          201 ILVEPR  206 (211)
Q Consensus       201 sl~~~~  206 (211)
                      .++..+
T Consensus       271 ~vv~t~  276 (319)
T 3dah_A          271 ELVVTD  276 (319)
T ss_dssp             EEEEES
T ss_pred             EEEEec
Confidence            777554

>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*

Probab=99.98  E-value=7.8e-34  Score=241.86  Aligned_cols=186  Identities=16%  Similarity=0.190  Sum_probs=146.0

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|||||+||||+||++.|      |+++|||+.               ++||++|++|+++..|+++++.+.+++++...
T Consensus        42 ~~~vrg~dv~iiqs~~~p------n~~lmell~~~~a~~~~~a~~i~~v~Py~~yaRqdr~~~~~~~i~ak~vA~ll~~~  115 (284)
T 1u9y_A           42 VDEINDDEAVIINTQKNQ------NDAIVETILLCDALRDEGVKKITLVAPYLAYARQDKKFNPGEAISIRALAKIYSNI  115 (284)
T ss_dssp             CSCCCSSEEEEECCCSSH------HHHHHHHHHHHHHHHTTTCCEEEEECSSCTTCSCSSCSSTTBCCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEeCCCCC------cHHHHHHHHHHHHHHHcCCceEEEEecccccceeeccccCCCchHHHHHHHHHhhc
Confidence            489999999999999843      999999843               79999999999999899999999999998432


Q ss_pred             ------------HHHH---------HHHHHHHHHHhhc-CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCcee
Q 028297           68 ------------KAFK---------DTVDIFVDRYRDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVI  125 (211)
Q Consensus        68 ------------~~~~---------~~~~~la~~i~~~-~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~  125 (211)
                                  ...+         ..+..+++++.+. +.++|++|+.||+++|..+|+.|++|+..++|+++.++.  
T Consensus       116 ~d~vit~dlH~~~~~~~f~~p~d~l~a~~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~~--  193 (284)
T 1u9y_A          116 VDKLITINPHETHIKDFFTIPFIYGDAVPKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPTE--  193 (284)
T ss_dssp             CSEEEEESCSCGGGGGGCSSCEEEECCHHHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------
T ss_pred             cCEEEEecCCChHHHHHhCCchhHhhHHHHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCCe--
Confidence                        1100         1156667777643 567999999999999999999999999888776643220  


Q ss_pred             eeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEE
Q 028297          126 SEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILV  203 (211)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~  203 (211)
                                ..+.+ .+...+||+||||||++|||+|+.++++.|+++||++|+++++|+.++  +.++|++.++++++
T Consensus       194 ----------~~~~l-~g~~v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~vv  262 (284)
T 1u9y_A          194 ----------IQIAP-KTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEVV  262 (284)
T ss_dssp             ------------CCB-SSCCCTTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEEE
T ss_pred             ----------EEEEe-cCccCCCCEEEEEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEEE
Confidence                      01222 232359999999999999999999999999999999999999999876  78888876788877


Q ss_pred             cccc
Q 028297          204 EPRL  207 (211)
Q Consensus       204 ~~~~  207 (211)
                      ..+.
T Consensus       263 ~t~t  266 (284)
T 1u9y_A          263 GTDT  266 (284)
T ss_dssp             EETT
T ss_pred             EeCC
Confidence            6654

>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*

Probab=99.98  E-value=1.4e-33  Score=243.64  Aligned_cols=187  Identities=20%  Similarity=0.225  Sum_probs=147.8

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|||||+||||+||++.|     +|+++|||+.               ++||++|++|+++..++.+++.+.+++++...
T Consensus        51 ~e~vrg~dv~iiqs~~~~-----~nd~lmell~~~~a~~~~~a~~i~av~pY~~yaRqd~K~~~r~~i~a~~~a~ll~~~  125 (317)
T 1dku_A           51 EESIRGCDCYIIQSTSDP-----VNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKARSREPITAKLFANLLETA  125 (317)
T ss_dssp             CSCCTTCEEEEECCCCSS-----HHHHHHHHHHHHHHHHHTTCSEEEEEESSCTTTTCCSCSSTTCCCHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEEcCCCCC-----CcHHHHHHHHHHHHhhccCcceEEEEEEcchHhhhhhhhcCCCchHHHHHHHHHHHc
Confidence            489999999999999866     8999999843               79999999999998899999888888887643


Q ss_pred             HHHH----------------------HHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCc
Q 028297           68 KAFK----------------------DTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGE  123 (211)
Q Consensus        68 ~~~~----------------------~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~  123 (211)
                      +..+                      .....+++++++.  +..+|++|+.||+.+|..+|+.|++|+..++|++...+.
T Consensus       126 g~~~vit~dlH~~q~~~~f~~p~d~l~a~p~l~~~l~~r~~~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~~  205 (317)
T 1dku_A          126 GATRVIALDLHAPQIQGFFDIPIDHLMGVPILGEYFEGKNLEDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNV  205 (317)
T ss_dssp             TCCEEEEESCSSGGGGGGCSSCEEEECSHHHHHHHHHTTTCCSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC------
T ss_pred             CCCEEEEeccCchhhhcccCCCceEEEehHHHHHHHHhhcCCCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEeccccc
Confidence            2111                      1245566666553  456999999999999999999999999887776532221


Q ss_pred             eeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEE
Q 028297          124 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI  201 (211)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~s  201 (211)
                                 ...+.+. +. .+||+|||||||+|||+|+.+|++.|+++||++|+++++|+..+  +.++|++.++..
T Consensus       206 -----------~~~~~l~-~~-v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~~  272 (317)
T 1dku_A          206 -----------AEVMNIV-GN-IEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKE  272 (317)
T ss_dssp             --------------CEEE-SC-CTTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEE
T ss_pred             -----------eeEEEec-cc-CCCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCCE
Confidence                       1123332 44 49999999999999999999999999999999999999999887  777887777877


Q ss_pred             EEcccc
Q 028297          202 LVEPRL  207 (211)
Q Consensus       202 l~~~~~  207 (211)
                      ++..+-
T Consensus       273 vv~t~t  278 (317)
T 1dku_A          273 LVVTNS  278 (317)
T ss_dssp             EEEETT
T ss_pred             EEEeCC
Confidence            776543

>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*

Probab=99.98  E-value=2.3e-33  Score=238.75  Aligned_cols=182  Identities=16%  Similarity=0.154  Sum_probs=148.6

Q ss_pred             ccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCHH
Q 028297            4 EETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHK   68 (211)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~~   68 (211)
                      ||  |+|||||||++.|     +|+++|||+.               ++||++|++|++...|+++|+.+.+++++... 
T Consensus        43 e~--g~dV~iiqs~~~p-----~nd~lmeLl~~ida~k~~~A~~it~ViPY~~YaRQDr~~~~~e~isak~vA~ll~~~-  114 (286)
T 3lrt_A           43 ED--LTGHNIFIIGNTH-----SDAEVMEMILTLSAIQDYRTKSVNIIAPYYGYARQHQRYKNGEPISSQILTEIYSSY-  114 (286)
T ss_dssp             SC--CTTSEEEEECCCC-----SHHHHHHHHHHHHHGGGSCCSEEEEEESSCTTTTCCSCSSTTCCCHHHHHHHHHHHT-
T ss_pred             CC--CCcEEEEEeCCCC-----CcHHHHHHHHHHHHHHHcCCCEEEEEecCcccccCcccCCCCCcccHHHHHHHHHHH-
Confidence            56  9999999999866     8999999843               79999999999999999999999999988532 


Q ss_pred             HHH-H---------------------HHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceee
Q 028297           69 AFK-D---------------------TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVIS  126 (211)
Q Consensus        69 ~~~-~---------------------~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~  126 (211)
                      ..+ .                     .+..+++++++.+.++|++|+.||+.+|..+|+.|++|+..++|+++.++..  
T Consensus       115 ~d~vit~DlH~~~iq~ff~~pvd~l~~~~~la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g~v--  192 (286)
T 3lrt_A          115 SNSIATVDIHDEKTLSYSKVKFSDLHANDAIVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDRTV--  192 (286)
T ss_dssp             CSEEEEESCSCGGGGGGCSSEEEEECCHHHHHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTEEE--
T ss_pred             hCeEEEecCChHHHhhhcCCcEEEeecHHHHHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCCcE--
Confidence            111 1                     1455566666556789999999999999999999999999888876433321  


Q ss_pred             eeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEEc
Q 028297          127 EAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE  204 (211)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~~  204 (211)
                                .+....+. .+||+||||||+++||+|+.++++.|+++||++++++++|+.++  +.++| +.++.+++.
T Consensus       193 ----------~i~~~~~d-v~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~vv~  260 (286)
T 3lrt_A          193 ----------EMKVPNVD-VNGKKLLIVDDIISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEIHV  260 (286)
T ss_dssp             ----------EEEESCCC-CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEEEE
T ss_pred             ----------EEeecccc-CCcCEEEEEeccccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEEEE
Confidence                      11111233 59999999999999999999999999999999999999999886  78899 778888776


Q ss_pred             ccc
Q 028297          205 PRL  207 (211)
Q Consensus       205 ~~~  207 (211)
                      -+-
T Consensus       261 Tnt  263 (286)
T 3lrt_A          261 TDT  263 (286)
T ss_dssp             ESS
T ss_pred             ecC
Confidence            543

>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*

Probab=99.97  E-value=1.2e-32  Score=242.64  Aligned_cols=196  Identities=15%  Similarity=0.178  Sum_probs=134.9

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|||||+|||||||++.|     +|++||||+.               ++||++|++|++. +++.+|+.+.+++++...
T Consensus        74 ~esvrg~dV~iiqs~~~~-----~nd~lmeLl~~idA~k~asA~rit~ViPY~~YaRQdr~-~~r~~i~ak~vA~lL~~a  147 (379)
T 2ji4_A           74 QESVRGKDVFIIQTVSKD-----VNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKM-RKRGSIVSKLLASMMCKA  147 (379)
T ss_dssp             CSCCTTCEEEEECCCCSC-----HHHHHHHHHHHHHHHHHTTCSEEEEECSSCSSCCC--------CCHHHHHHHHHHHT
T ss_pred             CCCcCCCEEEEEeCCCCC-----ccHHHHHHHHHHHHHHhcCCceEEEEEeccCccccccc-cCCCcHHHHHHHHHHHHc
Confidence            489999999999999866     8999999843               7999999999995 568889999899887532


Q ss_pred             HH------------HH----------HHHHHHHHHHhh----cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297           68 KA------------FK----------DTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP  121 (211)
Q Consensus        68 ~~------------~~----------~~~~~la~~i~~----~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~  121 (211)
                      +.            .+          .....+++++.+    .+.++|++|+.||+++|..+|+.|++|+.+++|++...
T Consensus       148 Gad~vit~DlHs~q~qgfF~ipvD~l~A~p~La~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~  227 (379)
T 2ji4_A          148 GLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDA  227 (379)
T ss_dssp             TCCEEEEESCSSGGGGGGSSSCEEEECCHHHHHHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC------
T ss_pred             CCCEEEEecCCChhhccccCCceeeeccHHHHHHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecc
Confidence            11            00          113334444433    24679999999999999999999999998887665321


Q ss_pred             C----------ceeeeeeeeecCc----------eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEE
Q 028297          122 G----------EVISEAYVLEYGT----------DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC  181 (211)
Q Consensus       122 ~----------~~~~~~~~~~~~~----------~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v  181 (211)
                      .          ......+..+++.          ..+.+ .+. .+||+||||||+++||+|+.++++.|++.||+.|.+
T Consensus       228 ~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~~~~~~~~l-~g~-v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~  305 (379)
T 2ji4_A          228 ESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITV-VGD-VGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFV  305 (379)
T ss_dssp             -----------------------------------CCCE-ESC-CTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEE
T ss_pred             cccccccccCCcccccccccccccchhhhhhhccccccc-ccC-CCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEE
Confidence            0          0000000000000          01111 133 599999999999999999999999999999999999


Q ss_pred             EEEEeCch--hhcccCCCCeEEEEccc
Q 028297          182 ACVVGLPE--GQRRLDGKPLYILVEPR  206 (211)
Q Consensus       182 ~~~~~~~~--~~~~l~~~~l~sl~~~~  206 (211)
                      +++|+.++  +.++|++.++..++..+
T Consensus       306 ~~tH~v~s~~a~~~l~~s~id~vvvTn  332 (379)
T 2ji4_A          306 MATHGLLSSDAPRRIEESAIDEVVVTN  332 (379)
T ss_dssp             EEEEECCCTTHHHHHHHSSCCEEEEES
T ss_pred             EEEeecCCcHHHHHHHhCCCCEEEEec
Confidence            99999776  78888766676666544

>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}

Probab=99.97  E-value=2.8e-30  Score=207.83  Aligned_cols=165  Identities=51%  Similarity=0.879  Sum_probs=145.2

Q ss_pred             eeeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCC
Q 028297           43 SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG  122 (211)
Q Consensus        43 ~~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~  122 (211)
                      ..+++++||.+++.|.|+.+++.+++..+.+++.+++++.+.++|+|+++|.||+++|..+|+.|++|+..+||+++.++
T Consensus        21 ~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~rk~~~~~~  100 (190)
T 2dy0_A           21 SIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPR  100 (190)
T ss_dssp             HSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHHTCEEEEEBSTTCCCS
T ss_pred             HHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHHCCCEEEEEecCCCCc
Confidence            34568999999999999999999999999999999999977678999999999999999999999999988888777666


Q ss_pred             ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCC
Q 028297          123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKP  198 (211)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~  198 (211)
                      ...+.+++.+++.+.+.+..+...+|++||||||++|||+|+.+|++.|+++||++|+++|++++.+  ++++|+  ++|
T Consensus       101 ~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~g~~  180 (190)
T 2dy0_A          101 ETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGIT  180 (190)
T ss_dssp             CEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHHTTTCE
T ss_pred             ccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHHHhhCCCc
Confidence            6666666666666667765444469999999999999999999999999999999999999999975  788886  899


Q ss_pred             eEEEEcccc
Q 028297          199 LYILVEPRL  207 (211)
Q Consensus       199 l~sl~~~~~  207 (211)
                      +++|+++++
T Consensus       181 v~sl~~~~~  189 (190)
T 2dy0_A          181 SYSLVPFPG  189 (190)
T ss_dssp             EEEEEEECC
T ss_pred             EEEEEEecC
Confidence            999999875

>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*

Probab=99.97  E-value=7.5e-30  Score=203.39  Aligned_cols=163  Identities=39%  Similarity=0.740  Sum_probs=143.1

Q ss_pred             eeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcC---CcEEEEecCCccchHHHHHHHhCCCeEEeecCCCC
Q 028297           44 FFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMG---ISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL  120 (211)
Q Consensus        44 ~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~---~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~  120 (211)
                      .+++++||.+++.|.|+..++.+++..+.+++.+++.+...+   +|+|++++.||+++|..+|+.|++|+..+|++++.
T Consensus        13 i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~   92 (180)
T 1zn8_A           13 IRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKL   92 (180)
T ss_dssp             CEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCEEEEEEETTCC
T ss_pred             HhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCCEEEEEecCCC
Confidence            456899999999999999999999999999999999886543   89999999999999999999999999888877666


Q ss_pred             CCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCC
Q 028297          121 PGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKP  198 (211)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~  198 (211)
                      ++...+..++.+++.+.+.+..+...+||+||||||++|||+|+.+|++.|+++|+++|++++++++++  +.++++++|
T Consensus        93 ~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~~~~~~l~~~~  172 (180)
T 1zn8_A           93 PGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVP  172 (180)
T ss_dssp             CSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHTTSC
T ss_pred             CcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCcchhhhhcCCc
Confidence            666666666666666677765454468999999999999999999999999999999999999999986  788999999


Q ss_pred             eEEEEccc
Q 028297          199 LYILVEPR  206 (211)
Q Consensus       199 l~sl~~~~  206 (211)
                      +++|++++
T Consensus       173 ~~sl~~~~  180 (180)
T 1zn8_A          173 FFSLLQYE  180 (180)
T ss_dssp             EEEEEEEC
T ss_pred             eEEEEecC
Confidence            99999874

>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A

Probab=99.97  E-value=1.1e-29  Score=203.76  Aligned_cols=164  Identities=35%  Similarity=0.694  Sum_probs=141.1

Q ss_pred             eeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhh----cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCC
Q 028297           44 FFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNK  119 (211)
Q Consensus        44 ~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~----~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~  119 (211)
                      .+.+++||.+++.|.|+..++.+++..+.+++.+++++.+    .++|+|++++.||+++|..+|+.+++|+..++|.++
T Consensus        14 ~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~rk~~~   93 (187)
T 1g2q_A           14 LHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVGFVPVRKAGK   93 (187)
T ss_dssp             CEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTCEEEEEEETTC
T ss_pred             cccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCCCEEEEEEeCC
Confidence            3568999999999999999999999999999999999976    468999999999999999999999999988887766


Q ss_pred             CCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCC
Q 028297          120 LPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGK  197 (211)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~  197 (211)
                      .++...+.+++.+++.+.+.+..+...+|++||||||++|||+|+.+|++.|+++|+++|++++++++.+  +++++ ++
T Consensus        94 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~~g~~~l-~~  172 (187)
T 1g2q_A           94 LPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKL-NA  172 (187)
T ss_dssp             SCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCSSCCCCC-SS
T ss_pred             CCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccCcCchhhc-Cc
Confidence            6666666666666666677765555569999999999999999999999999999999999999999986  78888 99


Q ss_pred             CeEEEEccccc
Q 028297          198 PLYILVEPRLS  208 (211)
Q Consensus       198 ~l~sl~~~~~~  208 (211)
                      |++||+++++.
T Consensus       173 ~~~sl~~~~~~  183 (187)
T 1g2q_A          173 PVFTLLNAQKE  183 (187)
T ss_dssp             CEEECC-----
T ss_pred             cEEEEEEechh
Confidence            99999999875

>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*

Probab=99.97  E-value=2.8e-29  Score=208.53  Aligned_cols=164  Identities=31%  Similarity=0.580  Sum_probs=144.0

Q ss_pred             ee-cCCCCCCe-eheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297           46 FF-QIWWAAGI-MFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP  121 (211)
Q Consensus        46 ~~-~~~~~~~i-~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~  121 (211)
                      ++ ++||.+++ .|.|++.++.++...+.+++.+++++.+.  ++|+|++++.||+++|..+|..|++|+..+||.++.+
T Consensus        28 ~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~~p~~~~rk~~k~~  107 (236)
T 1qb7_A           28 WYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPFVLMRKADKNA  107 (236)
T ss_dssp             EECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHTCCEEEEBCGGGCC
T ss_pred             ccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhCCCEEEEEEecCCC
Confidence            56 99999999 99999999999999999999999999876  7899999999999999999999999998888877666


Q ss_pred             Ccee-eeeeeeec---CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC
Q 028297          122 GEVI-SEAYVLEY---GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD  195 (211)
Q Consensus       122 ~~~~-~~~~~~~~---~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~  195 (211)
                      +... +.++..++   +.+.+++..+.+.+|++||||||++|||+|+.++++.|+++||+++++++++++.+  |+++|.
T Consensus       108 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~g~~~l~  187 (236)
T 1qb7_A          108 GLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSIPFLKAAEKIH  187 (236)
T ss_dssp             SSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECGGGCHHHHHH
T ss_pred             CcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEEEEcccccHHHHHh
Confidence            6554 44455555   44566665555569999999999999999999999999999999999999999986  788886


Q ss_pred             --------CCCeEEEEcccccc
Q 028297          196 --------GKPLYILVEPRLSV  209 (211)
Q Consensus       196 --------~~~l~sl~~~~~~~  209 (211)
                              |+|++||++++++.
T Consensus       188 ~~~~~~~~g~~v~sl~~~~~~~  209 (236)
T 1qb7_A          188 STANSRYKDIKFISLLSDDALT  209 (236)
T ss_dssp             HHHHHTTTTCCEEEEEEGGGCC
T ss_pred             hhcccccCCCcEEEEEEccccc
Confidence                    89999999999864

>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*

Probab=99.96  E-value=3.1e-28  Score=195.30  Aligned_cols=164  Identities=30%  Similarity=0.503  Sum_probs=140.4

Q ss_pred             eeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCc
Q 028297           44 FFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGE  123 (211)
Q Consensus        44 ~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~  123 (211)
                      .+.+|+||.+++.|.|+..++.++...+.+++.+++.+...++|+|+++|.||+++|..+|+.|++|+...+|+++.++.
T Consensus        12 ~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~~rk~~~~~~~   91 (186)
T 1l1q_A           12 IKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVALRKAGKLPGD   91 (186)
T ss_dssp             CEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEEEETTSSCSS
T ss_pred             hccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEEEEecCCCCCc
Confidence            45689999999999999999999999999999999988766789999999999999999999999999888877766655


Q ss_pred             eeeeeeeeecCce-eEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCe--EEEEEEEEeCch--hhcccCCCC
Q 028297          124 VISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAE--VVECACVVGLPE--GQRRLDGKP  198 (211)
Q Consensus       124 ~~~~~~~~~~~~~-~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~--~V~v~~~~~~~~--~~~~l~~~~  198 (211)
                      ..+.+++..++.. .+.+..+...+|++||||||++|||+|+.+|++.|+++||+  +|+++|++++++  |+++|.+++
T Consensus        92 ~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~~g~~~l~~~~  171 (186)
T 1l1q_A           92 VCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQKC  171 (186)
T ss_dssp             EEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGCHHHHHTTTC
T ss_pred             eechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCccHHHHHhhcC
Confidence            5444444433332 56655444459999999999999999999999999999999  999999999986  899999999


Q ss_pred             eEEEEcccc
Q 028297          199 LYILVEPRL  207 (211)
Q Consensus       199 l~sl~~~~~  207 (211)
                      +.+++.+.+
T Consensus       172 ~~~~~~~~~  180 (186)
T 1l1q_A          172 TRLFSVIRE  180 (186)
T ss_dssp             CCEEEEEEC
T ss_pred             cceehhhhh
Confidence            988887654

>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*

Probab=99.93  E-value=2.9e-26  Score=189.92  Aligned_cols=145  Identities=19%  Similarity=0.293  Sum_probs=118.9

Q ss_pred             CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeee
Q 028297           53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYV  130 (211)
Q Consensus        53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~  130 (211)
                      .+-.|.|.+.++.+|...+.+++.+++.+.+.  ++|+|+|++.||+++|..+|..|++|+.++||+++.++...     
T Consensus        54 ~Sp~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G~~~-----  128 (234)
T 3m3h_A           54 KSPIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKGN-----  128 (234)
T ss_dssp             EESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC---------C-----
T ss_pred             cCCEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCCcce-----
Confidence            33368999999999999999999999999876  78999999999999999999999999999888765443311     


Q ss_pred             eecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEccc
Q 028297          131 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPR  206 (211)
Q Consensus       131 ~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~  206 (211)
                            .+   .+...+|++||||||++|||+|+.++++.|+++|++++++++++++..  +.++++  |+|+++|++++
T Consensus       129 ------~i---~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL~~~~  199 (234)
T 3m3h_A          129 ------QI---EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSDYS  199 (234)
T ss_dssp             ------CE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEESSCHH
T ss_pred             ------EE---ecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEEEeeHH
Confidence                  22   245569999999999999999999999999999999999999999864  788884  89999999999


Q ss_pred             ccccC
Q 028297          207 LSVNY  211 (211)
Q Consensus       207 ~~~~~  211 (211)
                      ++++|
T Consensus       200 dl~~~  204 (234)
T 3m3h_A          200 ALTEV  204 (234)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98864

>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}

Probab=99.93  E-value=9.9e-26  Score=187.62  Aligned_cols=142  Identities=21%  Similarity=0.320  Sum_probs=123.6

Q ss_pred             eheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeec
Q 028297           56 MFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY  133 (211)
Q Consensus        56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~  133 (211)
                      .|.|++.++.+|...+.+++.+++.+.+.  ++|+|++++.||+++|..+|..|++|+.++||+++.++...        
T Consensus        69 ~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G~~~--------  140 (243)
T 3dez_A           69 IYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHGAGN--------  140 (243)
T ss_dssp             EEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC-----C--------
T ss_pred             EEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCCcee--------
Confidence            58899999999999999999999999876  78999999999999999999999999999988765444321        


Q ss_pred             CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEcccccc
Q 028297          134 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRLSV  209 (211)
Q Consensus       134 ~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~~~~  209 (211)
                         .+   .+...+|++||||||++|||+|+.++++.|+++|++++++++++++..  +.++++  ++++++|+++++++
T Consensus       141 ---~i---eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~sL~~~~dl~  214 (243)
T 3dez_A          141 ---QI---EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSNYSELI  214 (243)
T ss_dssp             ---CE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESSCHHHHH
T ss_pred             ---EE---EeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEEEeeHHHHH
Confidence               22   245569999999999999999999999999999999999999999863  788885  89999999999988


Q ss_pred             cC
Q 028297          210 NY  211 (211)
Q Consensus       210 ~~  211 (211)
                      +|
T Consensus       215 ~~  216 (243)
T 3dez_A          215 KV  216 (243)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}

Probab=99.92  E-value=1.1e-24  Score=173.91  Aligned_cols=143  Identities=24%  Similarity=0.269  Sum_probs=116.6

Q ss_pred             CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCe--EEeecCCCCCCceeeeeee
Q 028297           53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYV  130 (211)
Q Consensus        53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~--~~~~k~~~~~~~~~~~~~~  130 (211)
                      ++..|.|+..++.+|+..+.+++.+++++.+.++|+|+++|.||+++|..+|+.+++|+  ..+|++.+..+.       
T Consensus        31 ~s~~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~~~~~rk~~~~~g~-------  103 (180)
T 2p1z_A           31 EADYYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRKEAKKHGM-------  103 (180)
T ss_dssp             ----CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-CC--------
T ss_pred             cCCEEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCCeEEEEeccccccc-------
Confidence            34468899999999999999999999998777889999999999999999999999775  445544321111       


Q ss_pred             eecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEcccc
Q 028297          131 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRL  207 (211)
Q Consensus       131 ~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~  207 (211)
                          ...+.   +...+||+||||||++|||+|+.++++.|+++|++++++++++++++ ++++++  |+|++||+++++
T Consensus       104 ----~~~~~---g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~~sl~~~~~  176 (180)
T 2p1z_A          104 ----QRRIE---GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEYRYILGLED  176 (180)
T ss_dssp             ----CCSEE---SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCEEEEECSTT
T ss_pred             ----hhhcc---CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeEEEEEEHHH
Confidence                00121   34469999999999999999999999999999999999999999987 778884  899999999999


Q ss_pred             cc
Q 028297          208 SV  209 (211)
Q Consensus       208 ~~  209 (211)
                      ++
T Consensus       177 l~  178 (180)
T 2p1z_A          177 LG  178 (180)
T ss_dssp             TT
T ss_pred             hh
Confidence            84

>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}

Probab=99.92  E-value=4.6e-25  Score=175.70  Aligned_cols=141  Identities=22%  Similarity=0.368  Sum_probs=120.3

Q ss_pred             eheeHHHHhcCHHHHHHHHHHHHHHH-hhc-CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeec
Q 028297           56 MFQDITTLLLDHKAFKDTVDIFVDRY-RDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY  133 (211)
Q Consensus        56 ~~~d~~~l~~~~~~~~~~~~~la~~i-~~~-~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~  133 (211)
                      .|.|+..++.+|+..+.+++.+++.+ ... ++|+|++++.||+++|..+|+.+++|+...|++++..+..         
T Consensus        27 ~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~~g~~---------   97 (178)
T 2yzk_A           27 VYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKGHGTL---------   97 (178)
T ss_dssp             EEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTTSCCC---------
T ss_pred             eEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccccCcc---------
Confidence            47899999999999999999999988 654 6899999999999999999999999998877654321110         


Q ss_pred             CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEccccccc
Q 028297          134 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSVN  210 (211)
Q Consensus       134 ~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~~~~  210 (211)
                        ..+   .+.+ +||+||||||++|||+|+.++++.|+++|++++.+++++++.. +.++|+  ++|+++|++++++++
T Consensus        98 --~~i---~~~~-~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~~sl~~~~~~~~  171 (178)
T 2yzk_A           98 --SQV---EGDP-PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRLVSVATLKTILE  171 (178)
T ss_dssp             --CCC---BTCC-CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEEEEEEEHHHHHH
T ss_pred             --cee---cccC-CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcEEEEeeHHHHHH
Confidence              011   2454 9999999999999999999999999999999999999999876 788885  899999999999876


Q ss_pred             C
Q 028297          211 Y  211 (211)
Q Consensus       211 ~  211 (211)
                      |
T Consensus       172 ~  172 (178)
T 2yzk_A          172 K  172 (178)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}

Probab=99.92  E-value=6.7e-25  Score=178.51  Aligned_cols=142  Identities=20%  Similarity=0.375  Sum_probs=121.3

Q ss_pred             eheeHHHHhcCHHHHHHHHHHHHHHHhh--cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeec
Q 028297           56 MFQDITTLLLDHKAFKDTVDIFVDRYRD--MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY  133 (211)
Q Consensus        56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~--~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~  133 (211)
                      .|.|+..++.+|...+.+++.+++++.+  .++|+|+|+|.+|+++|..+|..|++|+...||..+..+..         
T Consensus        31 ~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~~g~~---------  101 (205)
T 2wns_A           31 IYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGTK---------  101 (205)
T ss_dssp             EEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTTSSSC---------
T ss_pred             EEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCccCcc---------
Confidence            5789999999999999999999999976  46899999999999999999999999998876654321110         


Q ss_pred             CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEccccccc
Q 028297          134 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSVN  210 (211)
Q Consensus       134 ~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~~~~  210 (211)
                        ..+   .+.+.+||+||||||++|||+|+.+|++.|+++|++++++++++++.. +.++++  |+|+++|++++++.+
T Consensus       102 --~~~---~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~~~~l~~~g~~v~sl~~~~~~~~  176 (205)
T 2wns_A          102 --RLV---EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKMLE  176 (205)
T ss_dssp             --CSE---ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEEEEEEEHHHHHH
T ss_pred             --ccc---cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCcchHHHHHHcCCeEEEEEEHHHHHH
Confidence              122   245568999999999999999999999999999999999999999975 777874  899999999998876


Q ss_pred             C
Q 028297          211 Y  211 (211)
Q Consensus       211 ~  211 (211)
                      |
T Consensus       177 ~  177 (205)
T 2wns_A          177 I  177 (205)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*

Probab=99.92  E-value=4.4e-24  Score=172.23  Aligned_cols=147  Identities=20%  Similarity=0.312  Sum_probs=118.6

Q ss_pred             HhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC--Cceeee-eeeeecC-ceeE
Q 028297           63 LLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP--GEVISE-AYVLEYG-TDRL  138 (211)
Q Consensus        63 l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~--~~~~~~-~~~~~~~-~~~~  138 (211)
                      +..++...+.+++.+++.+...++|+|+|+|.||+++|..+|+.|++|+..++|+++.+  +..... .+....+ ...+
T Consensus        31 ~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (197)
T 1y0b_A           31 HQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQI  110 (197)
T ss_dssp             SEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEEEBSSCCSSCCSSEEEEEEEETTTTEEEEE
T ss_pred             ccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEEEEecCCCCCCCceEEEeeeccccCceEEE
Confidence            45789999999999999987667899999999999999999999999998877766544  232211 1111111 2345


Q ss_pred             EEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEcccccc
Q 028297          139 EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRLSV  209 (211)
Q Consensus       139 ~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~~~~  209 (211)
                      .+..+...+||+||||||++|||+|+.+|++.|+++||++|+++|+++++.  +.++|+  +.|+++|++++++.
T Consensus       111 ~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~~~~~~sl~~~~~i~  185 (197)
T 1y0b_A          111 AVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSLE  185 (197)
T ss_dssp             EEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTSTHHHHHHHTTCCEEEEEEEEECT
T ss_pred             EEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchhhhHHhcCCcEEEEEEEEEec
Confidence            554344458999999999999999999999999999999999999999974  888886  78999999998763

>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}

Probab=99.91  E-value=3.3e-24  Score=177.32  Aligned_cols=146  Identities=16%  Similarity=0.205  Sum_probs=118.2

Q ss_pred             CCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHh------CCCeEEeecCCCCCC
Q 028297           51 WAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPG  122 (211)
Q Consensus        51 ~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L------~~p~~~~~k~~~~~~  122 (211)
                      .+.+-.|.|.+ ++.+|...+.+++.+++.+.+.  ++|+|++|+.||+++|..+|..|      ++|+.++||+.+..+
T Consensus        46 G~~Sp~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~RK~~k~~g  124 (232)
T 3mjd_A           46 GRISPYFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKDHG  124 (232)
T ss_dssp             SCEEEEEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEECCC-----
T ss_pred             CCccceEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEEeecccCC
Confidence            33444678875 5689999999999999999875  68999999999999999999997      899998888765433


Q ss_pred             ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hh--------cc
Q 028297          123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQ--------RR  193 (211)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~--------~~  193 (211)
                      ..           ..++   +...+|++||||||++|||+|+.+++++|+++||+++++++++++.+ ++        +.
T Consensus       125 ~~-----------~~i~---g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~~~  190 (232)
T 3mjd_A          125 EG-----------GVFV---GADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQEKAKDSDISATKKI  190 (232)
T ss_dssp             -------------CCEE---ESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSSSCHHHHH
T ss_pred             CC-----------ceEe---ccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCcCCccccchhHHHH
Confidence            21           1222   33459999999999999999999999999999999999999999986 44        44


Q ss_pred             cC--CCCeEEEEcccccccC
Q 028297          194 LD--GKPLYILVEPRLSVNY  211 (211)
Q Consensus       194 l~--~~~l~sl~~~~~~~~~  211 (211)
                      ++  |+|++||++++++++|
T Consensus       191 ~~~~gv~v~sL~~~~~l~~~  210 (232)
T 3mjd_A          191 SQDFNIPVLAVTNFESIFEY  210 (232)
T ss_dssp             HHHHCCCEEEEEEHHHHHHH
T ss_pred             HHHcCCcEEEEEeHHHHHHH
Confidence            43  9999999999998764

>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*

Probab=99.91  E-value=1.2e-23  Score=179.55  Aligned_cols=151  Identities=22%  Similarity=0.354  Sum_probs=121.3

Q ss_pred             heeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCC-CCceeeeeeeee--c
Q 028297           57 FQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL-PGEVISEAYVLE--Y  133 (211)
Q Consensus        57 ~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~-~~~~~~~~~~~~--~  133 (211)
                      |.++..++.+|.+.+.+++.+++.+.+.++|+|+++|.||+++|..+|..|++|+..++|+++. ++.....++...  .
T Consensus       102 f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~rk~~~~t~~~~~~~~~~~g~~~  181 (291)
T 1o57_A          102 YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYVSGSSN  181 (291)
T ss_dssp             EECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEEBCC-----CCEEEEEEECSSCC
T ss_pred             eEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEEEEeccCCCCceeeeeeeccccc
Confidence            5567788899999999999999999876789999999999999999999999999888776543 333333333211  1


Q ss_pred             CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCCCeEEEEccccc
Q 028297          134 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLS  208 (211)
Q Consensus       134 ~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~~l~sl~~~~~~  208 (211)
                      ....+.+......+|++||||||++|||+|+.+|++.|+++||+++++++++++..+.+++ +.|++||++++++
T Consensus       182 ~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~~~~l-~~~~~SL~~~~~~  255 (291)
T 1o57_A          182 RIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVDERL-VDEYMSLLTLSTI  255 (291)
T ss_dssp             SEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSCTTSC-CSCCEEEEEEECC
T ss_pred             ceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcccccc-CCceEEEEEEccc
Confidence            1235555544446999999999999999999999999999999999999999998765555 5799999999876

>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A

Probab=99.91  E-value=5.9e-24  Score=173.87  Aligned_cols=143  Identities=17%  Similarity=0.306  Sum_probs=119.1

Q ss_pred             CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHh------CCCeEEeecCCCCCCce
Q 028297           53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEV  124 (211)
Q Consensus        53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L------~~p~~~~~k~~~~~~~~  124 (211)
                      .+-.|.| ..++.++...+.+++.+++++.+.  ++|+|+|++.||+++|..+|..|      ++|+...||+.+.++..
T Consensus        30 ~s~~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~~  108 (213)
T 1lh0_A           30 KSPYFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGEG  108 (213)
T ss_dssp             EEEEEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTTC
T ss_pred             cccEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCCC
Confidence            3345778 568888999999999999999764  68999999999999999999999      89998888765433221


Q ss_pred             eeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhccc---------
Q 028297          125 ISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRL---------  194 (211)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l---------  194 (211)
                                 ..+.   +...+| +||||||++|||+|+.++++.|+++|++++++++++++.+ |+++|         
T Consensus       109 -----------~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~~g~~~l~~~~~~~~~  173 (213)
T 1lh0_A          109 -----------GSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERD  173 (213)
T ss_dssp             -----------SSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHH
T ss_pred             -----------Ccee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEcccCcccchhhHHHHHHH
Confidence                       1222   233589 9999999999999999999999999999999999999987 66666         


Q ss_pred             CCCCeEEEEcccccccC
Q 028297          195 DGKPLYILVEPRLSVNY  211 (211)
Q Consensus       195 ~~~~l~sl~~~~~~~~~  211 (211)
                      .|+|++||++++++++|
T Consensus       174 ~g~~v~sl~~~~~l~~~  190 (213)
T 1lh0_A          174 YGCKVISIITLKDLIAY  190 (213)
T ss_dssp             HCCEEEEEEEHHHHHHH
T ss_pred             cCCCeEEEEEHHHHHHH
Confidence            48999999999988764

>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.91  E-value=6.7e-24  Score=168.00  Aligned_cols=157  Identities=17%  Similarity=0.171  Sum_probs=121.5

Q ss_pred             eeeeecCCCCC-CeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCC-
Q 028297           43 SFFFFQIWWAA-GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL-  120 (211)
Q Consensus        43 ~~~~~~~~~~~-~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~-  120 (211)
                      ..+.+++||.+ ++ |.+..++..++...+.+++.+++++.. ++|+|++++.||+++|..+|+.|++|+...+|+++. 
T Consensus        11 ~~~~~~~~~~~~g~-~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~~~~~   88 (175)
T 1vch_A           11 VTRHVPLIEPLPGR-RIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRRRRPY   88 (175)
T ss_dssp             EEEEECEEEEETTE-EEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSCCTT
T ss_pred             eeeEcCceEcCCCc-EEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEecCCCC
Confidence            34457888876 55 588888899999999999999988865 689999999999999999999999999877766543 


Q ss_pred             -CCceeeeeeeeec-CceeEEEecCCc--CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCC
Q 028297          121 -PGEVISEAYVLEY-GTDRLEMHVGAI--EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDG  196 (211)
Q Consensus       121 -~~~~~~~~~~~~~-~~~~~~~~~~~~--~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~  196 (211)
                       +..........++ ..+.+.+..+..  .+||+||||||++|||+|+.+|++.|+++||++|++++++++...     +
T Consensus        89 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~-----~  163 (175)
T 1vch_A           89 MEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTP-----G  163 (175)
T ss_dssp             CCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCC-----S
T ss_pred             CCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCC-----C
Confidence             2221111111111 123555432222  389999999999999999999999999999999999999998643     7


Q ss_pred             CCeEEEEccc
Q 028297          197 KPLYILVEPR  206 (211)
Q Consensus       197 ~~l~sl~~~~  206 (211)
                      .|+++|..++
T Consensus       164 ~~~~sl~~~~  173 (175)
T 1vch_A          164 LAVDTVAELP  173 (175)
T ss_dssp             SCCEEEEECC
T ss_pred             cceEEEEeec
Confidence            8999999875

>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1

Probab=99.90  E-value=2.4e-23  Score=169.87  Aligned_cols=141  Identities=23%  Similarity=0.351  Sum_probs=118.5

Q ss_pred             eheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeec
Q 028297           56 MFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY  133 (211)
Q Consensus        56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~  133 (211)
                      .|.|.+.++.+|...+.+++.+++++.+.  ++|+|+|++.||+++|..+|+.|++|+..++|+++.++..         
T Consensus        37 ~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~~---------  107 (211)
T 2aee_A           37 IYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAG---------  107 (211)
T ss_dssp             EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC----C---------
T ss_pred             eEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCCc---------
Confidence            47889999999999999999999998754  6799999999999999999999999998888766433221         


Q ss_pred             CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEcccccc
Q 028297          134 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRLSV  209 (211)
Q Consensus       134 ~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~~~~  209 (211)
                        ..+.   +...+||+||||||++|||+|+.++++.|+++|+++++++++++++.  +.++|+  ++|+.++++.+++.
T Consensus       108 --~~i~---g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~~~i~  182 (211)
T 2aee_A          108 --NQIE---GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELI  182 (211)
T ss_dssp             --CSEE---SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHHHHH
T ss_pred             --ceec---CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEeeHHHHH
Confidence              1222   44469999999999999999999999999999999999999999864  788885  78999999987654


Q ss_pred             c
Q 028297          210 N  210 (211)
Q Consensus       210 ~  210 (211)
                      +
T Consensus       183 ~  183 (211)
T 2aee_A          183 A  183 (211)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}

Probab=99.90  E-value=2e-23  Score=172.96  Aligned_cols=144  Identities=19%  Similarity=0.299  Sum_probs=116.1

Q ss_pred             CCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHh------CCCeEEeecCCCCCCc
Q 028297           52 AAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGE  123 (211)
Q Consensus        52 ~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L------~~p~~~~~k~~~~~~~  123 (211)
                      +.+-.|.|. .++.+|...+.+++.+++.+.+.  ++|+|++|+.||+++|..+|..|      ++|+.++||+.+.++.
T Consensus        54 ~~Sp~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK~~k~~g~  132 (238)
T 3n2l_A           54 RKSPYFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRKEAKNHGE  132 (238)
T ss_dssp             CEEEEEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECCC------
T ss_pred             CcccEEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEeeccCCCCC
Confidence            333468887 56789999999999999999764  68999999999999999999997      7899998887654432


Q ss_pred             eeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhc------cc--
Q 028297          124 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQR------RL--  194 (211)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~------~l--  194 (211)
                      .           ..++   +...+| +||||||++|||+|+.+++++|+++|++++++++++++.+ |++      ++  
T Consensus       133 ~-----------~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~~l~a~~~~~~  197 (238)
T 3n2l_A          133 G-----------GNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQEKGKGELSAIQEVER  197 (238)
T ss_dssp             -------------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCCBCSSSSBHHHHHHH
T ss_pred             C-----------ceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEcccCccchhhHHHHHHH
Confidence            1           1222   334589 9999999999999999999999999999999999999876 333      23  


Q ss_pred             -CCCCeEEEEcccccccC
Q 028297          195 -DGKPLYILVEPRLSVNY  211 (211)
Q Consensus       195 -~~~~l~sl~~~~~~~~~  211 (211)
                       .|+|++||++++++++|
T Consensus       198 ~~Gv~v~SL~~~~~l~~~  215 (238)
T 3n2l_A          198 DFGCAVISIVSLTDLITY  215 (238)
T ss_dssp             HHCCEEEEEEEHHHHHHH
T ss_pred             HcCCCEEEEEEHHHHHHH
Confidence             39999999999998764

>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}

Probab=99.89  E-value=2.4e-23  Score=187.17  Aligned_cols=141  Identities=21%  Similarity=0.320  Sum_probs=122.0

Q ss_pred             eheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCc
Q 028297           56 MFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGT  135 (211)
Q Consensus        56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~  135 (211)
                      .|.|++.++.+|...+.+++.+++.+.+.++|+|++++.||+++|..+|..|++|+.++||+++..+..           
T Consensus       287 ~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~p~~~~rk~~k~~g~~-----------  355 (453)
T 3qw4_B          287 IYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRREAKIYGTK-----------  355 (453)
T ss_dssp             EEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCCCEEEESSCC-----------------
T ss_pred             EEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCCCEEEEEeeccccCcC-----------
Confidence            589999999999999999999999998778999999999999999999999999999888766432210           


Q ss_pred             eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEccccccc
Q 028297          136 DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSVN  210 (211)
Q Consensus       136 ~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~~~~  210 (211)
                      ..+   .+.+.+|++||||||++|||+|+.++++.|+++|++++++++++++.. ++++|+  |+|++||++++|+++
T Consensus       356 ~~i---~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~~g~~~l~~~g~~v~sL~~~~dl~~  430 (453)
T 3qw4_B          356 AAI---EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDMGAKAFLNKLGYDFEAVVGLHQLLP  430 (453)
T ss_dssp             -CE---ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSSSHHHHHHHTTCCEEEEEEHHHHHH
T ss_pred             ceE---ecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCcchHHHHHhcCCCEEEEeEHHHHHH
Confidence            112   245569999999999999999999999999999999999999999987 778884  999999999999875

>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*

Probab=99.89  E-value=4.2e-23  Score=170.20  Aligned_cols=143  Identities=17%  Similarity=0.267  Sum_probs=117.8

Q ss_pred             CeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHh---------CCCeEEeecCCCCCC
Q 028297           54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI---------GAKFVPLRKPNKLPG  122 (211)
Q Consensus        54 ~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L---------~~p~~~~~k~~~~~~  122 (211)
                      +..|.| ..++.++...+.+++.+++++.+.  ++|+|++|+.+|+++|..+|..|         ++|+...||.++.++
T Consensus        35 s~~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~~g  113 (226)
T 2ps1_A           35 SPYFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKDHG  113 (226)
T ss_dssp             EEEEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEESST
T ss_pred             CCEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhhcC
Confidence            335777 568889999999999999999764  68999999999999999999999         999888776543322


Q ss_pred             ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhc----c----
Q 028297          123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQR----R----  193 (211)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~----~----  193 (211)
                                  .+.+..  +...+|++||||||++|||+|+.++++.|+++|++++++++++++.+ +++    +    
T Consensus       114 ------------~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~g~~~~~~~~~~~  179 (226)
T 2ps1_A          114 ------------EGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEVVSTDDKEGLSAT  179 (226)
T ss_dssp             ------------TCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBBSCTTCSSCCBHH
T ss_pred             ------------CCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCcccccccccchHH
Confidence                        223332  23349999999999999999999999999999999999999999987 443    2    


Q ss_pred             -----cCCCCeEEEEcccccccC
Q 028297          194 -----LDGKPLYILVEPRLSVNY  211 (211)
Q Consensus       194 -----l~~~~l~sl~~~~~~~~~  211 (211)
                           ..|+|++||++++++++|
T Consensus       180 ~~~~~~~g~~v~sl~~~~~l~~~  202 (226)
T 2ps1_A          180 QTVSKKYGIPVLSIVSLIHIITY  202 (226)
T ss_dssp             HHHHHHHTCCEEEEEEHHHHHHH
T ss_pred             HHHHHhcCCeEEEEecHHHHHHH
Confidence                 349999999999988764

>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*

Probab=99.80  E-value=3.5e-19  Score=144.59  Aligned_cols=137  Identities=16%  Similarity=0.211  Sum_probs=106.0

Q ss_pred             eecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCe--EEeecCCCC
Q 028297           46 FFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKL  120 (211)
Q Consensus        46 ~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~--~~~~k~~~~  120 (211)
                      .-++||.++|...|+..++.+++..+...+.+++++.+.   +.++|+||+.||+.+|..+|+.|++|+  ..+++++..
T Consensus        16 ~~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~Y~   95 (204)
T 3hvu_A           16 ENLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYG   95 (204)
T ss_dssp             ---CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECS
T ss_pred             CCCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEEec
Confidence            457899999988888888999999999999999988654   478999999999999999999999985  334432211


Q ss_pred             CCceeeeeeeeecCceeEEEe--cCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          121 PGEVISEAYVLEYGTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                      ...         ...+.+.+.  .....+||+||||||+++||+|+.++++.|+++|++++.+++++++++++
T Consensus        96 ~~~---------~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~  159 (204)
T 3hvu_A           96 HST---------VSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGR  159 (204)
T ss_dssp             GGG---------TTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGGGC
T ss_pred             CCC---------ccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCCCC
Confidence            100         001112221  12235899999999999999999999999999999999999999998643

>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1

Probab=99.79  E-value=6.7e-19  Score=136.14  Aligned_cols=118  Identities=16%  Similarity=0.258  Sum_probs=88.5

Q ss_pred             cCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCC-CCceeeeeeeeecCceeEEEec
Q 028297           65 LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKL-PGEVISEAYVLEYGTDRLEMHV  142 (211)
Q Consensus        65 ~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~  142 (211)
                      .+....+.+++.+++++.+.++|+|++++.||+++|..+|+.|++|+.. +++.... .+...        ....+....
T Consensus         6 ~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~   77 (153)
T 1vdm_A            6 LTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDERG--------EKPVITIPI   77 (153)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--CCC--------SSCEEEECC
T ss_pred             CCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcccc--------cceeEeccC
Confidence            3455566677888888865578999999999999999999999999653 3322111 11100        001233322


Q ss_pred             CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297          143 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG  190 (211)
Q Consensus       143 ~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~  190 (211)
                      ....+||+||||||++|||+|+.++++.|+++|+++|++++++.++..
T Consensus        78 ~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~~  125 (153)
T 1vdm_A           78 HGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWT  125 (153)
T ss_dssp             CSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTTC
T ss_pred             CcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCCC
Confidence            334589999999999999999999999999999999999999998764

>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1

Probab=99.79  E-value=8.2e-19  Score=139.87  Aligned_cols=129  Identities=12%  Similarity=0.228  Sum_probs=94.9

Q ss_pred             eeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeee
Q 028297           58 QDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLE  132 (211)
Q Consensus        58 ~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~  132 (211)
                      .|+..++.+++..+..+..+++++.+.   +.++|++++.||+++|..+|+.|++|+..  ++... .... .      .
T Consensus         8 ~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~-y~~~-~------~   79 (183)
T 1hgx_A            8 DDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSS-YSGT-K------S   79 (183)
T ss_dssp             TTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC--------------
T ss_pred             cCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEe-cCCc-c------c
Confidence            456667788888888889999888643   57999999999999999999999999754  22111 0100 0      0


Q ss_pred             cCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhccc
Q 028297          133 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL  194 (211)
Q Consensus       133 ~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l  194 (211)
                      .+...+........+||+||||||++|||+|+.++++.|+++|+++|.++++++++.+.+++
T Consensus        80 ~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~g~~~~  141 (183)
T 1hgx_A           80 TGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGKKAY  141 (183)
T ss_dssp             ---CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCSSCSS
T ss_pred             ccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCcccccC
Confidence            01112221112235899999999999999999999999999999999999999887634444

>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A

Probab=99.77  E-value=2.1e-18  Score=142.74  Aligned_cols=145  Identities=17%  Similarity=0.088  Sum_probs=104.9

Q ss_pred             eecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEEee-cCCCCC
Q 028297           46 FFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVPLR-KPNKLP  121 (211)
Q Consensus        46 ~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~-k~~~~~  121 (211)
                      ...+||.+++.+.|+..++.+++..+...+.+++++.+.   +.++|+|++.||+++|..+|+.|+.++...+ |..+.+
T Consensus        31 ~~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~P  110 (233)
T 1fsg_A           31 NADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPP  110 (233)
T ss_dssp             EGGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCS
T ss_pred             ccccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCCC
Confidence            357788888888888888899999999999999888652   6799999999999999999999987322211 111111


Q ss_pred             Cc--eee-eeeeeecCceeEEEecC--CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297          122 GE--VIS-EAYVLEYGTDRLEMHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG  190 (211)
Q Consensus       122 ~~--~~~-~~~~~~~~~~~~~~~~~--~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~  190 (211)
                      ..  ... .+|+.+...+.+.+..+  ...+||+||||||+++||+|+.++++.|+++|+++|.++++++++++
T Consensus       111 ~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~~  184 (233)
T 1fsg_A          111 FFEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTD  184 (233)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCT
T ss_pred             cEEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence            00  000 01111111112233211  22589999999999999999999999999999999999999997764

>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*

Probab=99.75  E-value=2.5e-18  Score=140.78  Aligned_cols=135  Identities=13%  Similarity=0.187  Sum_probs=101.9

Q ss_pred             eecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhh---cCCcEEEEecCCccchHHHHHHHhC---------CCe--
Q 028297           46 FFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIG---------AKF--  111 (211)
Q Consensus        46 ~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~---~~~d~Iv~i~~gG~~~A~~lA~~L~---------~p~--  111 (211)
                      +..+||.+++.+.|+..++.+++.++...+.+++++.+   .+.++|++++.||+++|..+|+.|+         +|+  
T Consensus        17 ~~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~   96 (217)
T 1z7g_A           17 DLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTV   96 (217)
T ss_dssp             CGGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEE
T ss_pred             cccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeee
Confidence            45688888888888888889999999888899988864   3578999999999999999999998         564  


Q ss_pred             EEeecCCCCCCceeeeeeeeecCceeEEEec---CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCc
Q 028297          112 VPLRKPNKLPGEVISEAYVLEYGTDRLEMHV---GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP  188 (211)
Q Consensus       112 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~  188 (211)
                      ..++..... +.         ...+.+.+..   ....+||+||||||+++||+|+.++++.|+++|++++.++++++++
T Consensus        97 ~~i~~~~y~-~~---------~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~  166 (217)
T 1z7g_A           97 DFIRLKSYC-ND---------QSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKR  166 (217)
T ss_dssp             EEECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEEC
T ss_pred             eeEEEEEec-cc---------ccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECc
Confidence            223321110 00         0001111111   1224899999999999999999999999999999999999999877


Q ss_pred             hh
Q 028297          189 EG  190 (211)
Q Consensus       189 ~~  190 (211)
                      ++
T Consensus       167 ~~  168 (217)
T 1z7g_A          167 TP  168 (217)
T ss_dssp             C-
T ss_pred             cc
Confidence            53

>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}

Probab=99.75  E-value=2.8e-17  Score=131.28  Aligned_cols=123  Identities=15%  Similarity=0.167  Sum_probs=89.7

Q ss_pred             HHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCe--EEeecCCCCCCceeeeeeeeecCce
Q 028297           62 TLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYGTD  136 (211)
Q Consensus        62 ~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~--~~~~k~~~~~~~~~~~~~~~~~~~~  136 (211)
                      .++.++...+.....+++++.+.   ++++|++++.||+++|..+|+.|++|+  ..+++.+.......       .++.
T Consensus        14 ~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~~~~-------~~~~   86 (185)
T 2geb_A           14 EILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSSTKS-------SGIV   86 (185)
T ss_dssp             EEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTTHHH-------HCCE
T ss_pred             eEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCCCcc-------CccE
Confidence            34566677777777788877643   579999999999999999999999987  33432211111000       0111


Q ss_pred             eEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          137 RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       137 ~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                      .+........+||+||||||++|||+|+.++++.|+++|+++|.+++++++++++
T Consensus        87 ~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~  141 (185)
T 2geb_A           87 KIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERR  141 (185)
T ss_dssp             EEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC
T ss_pred             EEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCcc
Confidence            1211112235899999999999999999999999999999999999999998654

>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1

Probab=99.74  E-value=1.2e-17  Score=136.22  Aligned_cols=125  Identities=13%  Similarity=0.159  Sum_probs=85.6

Q ss_pred             eHHHHhcCHHHHHHHHHHHHHHHhh---------cCCcEEEEecCCccchHHHHHHHh---CCCe--EEeecCCCCCCce
Q 028297           59 DITTLLLDHKAFKDTVDIFVDRYRD---------MGISVVAGIEARGFVFGPSIALAI---GAKF--VPLRKPNKLPGEV  124 (211)
Q Consensus        59 d~~~l~~~~~~~~~~~~~la~~i~~---------~~~d~Iv~i~~gG~~~A~~lA~~L---~~p~--~~~~k~~~~~~~~  124 (211)
                      |+..++.++...+...+.+++++.+         .+.++|+|++.||+++|..+|+.|   ++|+  ..+++.+...+..
T Consensus        22 di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y~~~~~  101 (211)
T 1pzm_A           22 MSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGSGVE  101 (211)
T ss_dssp             TEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-------
T ss_pred             ccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeeccCccc
Confidence            3334445555555556666666543         346899999999999999999999   9995  3344322111100


Q ss_pred             eeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297          125 ISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG  190 (211)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~  190 (211)
                      .       .+.-.+........+||+||||||+++||+|+.++++.|+++|+++|.++++++++++
T Consensus       102 ~-------~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~  160 (211)
T 1pzm_A          102 T-------SGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSG  160 (211)
T ss_dssp             -------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred             c-------CCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence            0       0000110011123589999999999999999999999999999999999999999864

>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}

Probab=99.74  E-value=1.1e-17  Score=137.75  Aligned_cols=133  Identities=14%  Similarity=0.245  Sum_probs=96.2

Q ss_pred             cCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhC---------CCe--EE
Q 028297           48 QIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIG---------AKF--VP  113 (211)
Q Consensus        48 ~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~---------~p~--~~  113 (211)
                      ..|+.+++.+.++..++.++.........+++++.+.   +.++|+|++.||+++|..+|+.|+         +|+  ..
T Consensus        27 ~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~  106 (225)
T 2jbh_A           27 NLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDF  106 (225)
T ss_dssp             GGSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEE
T ss_pred             HHCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEE
Confidence            3466666655666677778888888888888888652   578999999999999999999998         564  33


Q ss_pred             eecCCCCCCceeeeeeeeecCceeEEEec--C-CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297          114 LRKPNKLPGEVISEAYVLEYGTDRLEMHV--G-AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG  190 (211)
Q Consensus       114 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~  190 (211)
                      ++..+. .+..         ..+.+.+..  . ...+||+||||||+++||+|+.++++.|+++|+++|.++++++++++
T Consensus       107 i~~~~y-~~~~---------~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~~  176 (225)
T 2jbh_A          107 IRLKSY-RNDQ---------SMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTS  176 (225)
T ss_dssp             EEEC--------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC-
T ss_pred             EEEEec-cCcc---------ccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence            433211 0100         001111111  1 22489999999999999999999999999999999999999987754

>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0

Probab=99.73  E-value=2.2e-17  Score=132.20  Aligned_cols=124  Identities=15%  Similarity=0.216  Sum_probs=93.0

Q ss_pred             eHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeec
Q 028297           59 DITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEY  133 (211)
Q Consensus        59 d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~  133 (211)
                      |+..++.+++..+...+.+++++.+.   +.++|+|++.||+.+|..+|+.|++|+..  ++..+......         
T Consensus         7 di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~Y~~~~~---------   77 (186)
T 3o7m_A            7 EIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQTE---------   77 (186)
T ss_dssp             EEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEECC-------------
T ss_pred             cccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEEecCCCc---------
Confidence            45556778888888888888887653   47899999999999999999999998633  44322111000         


Q ss_pred             CceeEEEe--cCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          134 GTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       134 ~~~~~~~~--~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                      ..+.+.+.  .....+||+||||||+++||+|+.++++.|+++|++++.++++++++.++
T Consensus        78 ~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~  137 (186)
T 3o7m_A           78 TTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERR  137 (186)
T ss_dssp             ---CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC
T ss_pred             ccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCCCC
Confidence            01112222  12235899999999999999999999999999999999999999998643

>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*

Probab=99.73  E-value=4.7e-18  Score=141.63  Aligned_cols=142  Identities=14%  Similarity=0.143  Sum_probs=101.7

Q ss_pred             CCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCce-
Q 028297           50 WWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEV-  124 (211)
Q Consensus        50 ~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~-  124 (211)
                      |..+.....|+..++.+++..+...+.|++++.+.   +.++|+|++.||+.+|..+|+.|+.++.. +||..+.+... 
T Consensus        49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~  128 (250)
T 3ozf_A           49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH  128 (250)
T ss_dssp             SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred             ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence            34344455677777888999998888999888643   46899999999999999999999843322 23333332211 


Q ss_pred             --eeeeeeeecCceeEEEecCC--cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          125 --ISEAYVLEYGTDRLEMHVGA--IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       125 --~~~~~~~~~~~~~~~~~~~~--~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                        ...+|+.+++.+.+++..+.  ..+||+||||||+++||+|+.++++.|+++|++++.++++++++.++
T Consensus       129 fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~~r  199 (250)
T 3ozf_A          129 YVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPL  199 (250)
T ss_dssp             EEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECCTT
T ss_pred             EEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCccc
Confidence              11123222223344443222  24899999999999999999999999999999999999999998643

>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*

Probab=99.72  E-value=3.5e-17  Score=134.28  Aligned_cols=125  Identities=15%  Similarity=0.182  Sum_probs=88.7

Q ss_pred             eHHHHhcCHHHHHHHHHHHHHHHhhc---CC-------cEEEEecCCccchHHHHHHHh---CCCeE--EeecCCCCCCc
Q 028297           59 DITTLLLDHKAFKDTVDIFVDRYRDM---GI-------SVVAGIEARGFVFGPSIALAI---GAKFV--PLRKPNKLPGE  123 (211)
Q Consensus        59 d~~~l~~~~~~~~~~~~~la~~i~~~---~~-------d~Iv~i~~gG~~~A~~lA~~L---~~p~~--~~~k~~~~~~~  123 (211)
                      |+..++.+++......+.|+.++.+.   ..       ++|+|++.||+++|..+|+.|   ++|+.  .+++.+...+.
T Consensus         6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~~~   85 (220)
T 1tc1_A            6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGL   85 (220)
T ss_dssp             TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred             ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCCCc
Confidence            44455667777777777777777532   23       899999999999999999999   99953  34322111110


Q ss_pred             eeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297          124 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG  190 (211)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~  190 (211)
                      ..       .+.-.+........+||+||||||++|||+|+.++++.|+++|+++|.++++++++++
T Consensus        86 ~~-------~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~  145 (220)
T 1tc1_A           86 TS-------SGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREG  145 (220)
T ss_dssp             ------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTC
T ss_pred             cc-------CCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence            00       0011121111223589999999999999999999999999999999999999998864

>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.72  E-value=4.4e-17  Score=132.36  Aligned_cols=133  Identities=25%  Similarity=0.328  Sum_probs=87.4

Q ss_pred             HHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCce-------------
Q 028297           74 VDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTD-------------  136 (211)
Q Consensus        74 ~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~-------------  136 (211)
                      ++.|++++.+.  +.++|+++|+||+++|..+|+.|++|+..  ++|.+...+.........+.+..             
T Consensus        10 ~~~La~~i~~~~~~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~~~~   89 (208)
T 1wd5_A           10 GALLAEALAPLGLEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQS   89 (208)
T ss_dssp             HHHHHHHHGGGCCCSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSCHH
T ss_pred             HHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhcccCHH
Confidence            44455545432  56899999999999999999999999876  44432211000000000000000             


Q ss_pred             ------------------eEE-EecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCC
Q 028297          137 ------------------RLE-MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGK  197 (211)
Q Consensus       137 ------------------~~~-~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~  197 (211)
                                        .+. .......+||+||||||++|||+|+.+|++.|+++|+++|.+++.+....+.++|...
T Consensus        90 ~l~~~~~~~~~~~~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~~~~~~l~~~  169 (208)
T 1wd5_A           90 YLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLKAR  169 (208)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCHHHHHHhccc
Confidence                              000 0011225899999999999999999999999999999999999999888776766432


Q ss_pred             -CeEEEEccc
Q 028297          198 -PLYILVEPR  206 (211)
Q Consensus       198 -~l~sl~~~~  206 (211)
                       .+..+.+.+
T Consensus       170 ~~~v~~~~~~  179 (208)
T 1wd5_A          170 AEVVALSVPQ  179 (208)
T ss_dssp             SEEEEEECCT
T ss_pred             CcEEEEecCc
Confidence             555555433

>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*

Probab=99.72  E-value=5.8e-17  Score=131.42  Aligned_cols=122  Identities=16%  Similarity=0.174  Sum_probs=88.4

Q ss_pred             HhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeE--EeecCCCCCCceeeeeeeeecCcee
Q 028297           63 LLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDR  137 (211)
Q Consensus        63 l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~  137 (211)
                      ++.++.........+++++.+.   ++|+|++++.||+++|..+|+.|++|+.  .+++.+.......       .++..
T Consensus        35 ~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~~~~~~-------~~~~~  107 (205)
T 1yfz_A           35 ILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSSTKS-------SGIVK  107 (205)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECSHHHHH-------HCCEE
T ss_pred             EEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEeccCCccc-------cceEE
Confidence            4556666677777777777642   5799999999999999999999999962  3332211100000       01111


Q ss_pred             EEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          138 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       138 ~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                      +........+||+||||||++|||+|+.++++.|+++|+++|.+++++++++++
T Consensus       108 ~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~  161 (205)
T 1yfz_A          108 IIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERR  161 (205)
T ss_dssp             EEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC
T ss_pred             EeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCccc
Confidence            111112235899999999999999999999999999999999999999988654

>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*

Probab=99.71  E-value=3.6e-17  Score=129.90  Aligned_cols=122  Identities=16%  Similarity=0.214  Sum_probs=83.3

Q ss_pred             HhcCHHHHHHHHHHHHHHHhhc----CCcEEEEecCCccchHHHHHHHhC----CC--eEEeecCCC-CCCceeeeeeee
Q 028297           63 LLLDHKAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAIG----AK--FVPLRKPNK-LPGEVISEAYVL  131 (211)
Q Consensus        63 l~~~~~~~~~~~~~la~~i~~~----~~d~Iv~i~~gG~~~A~~lA~~L~----~p--~~~~~k~~~-~~~~~~~~~~~~  131 (211)
                      ++.++.........+++++.+.    ++|+|++++.||+++|..+|+.|+    +|  +..+++... ..........  
T Consensus         6 ~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--   83 (181)
T 1a3c_A            6 VILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSND--   83 (181)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------CC--
T ss_pred             CccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCccc--
Confidence            4456677777777788777643    579999999999999999999987    44  333433211 1111100000  


Q ss_pred             ecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEEEEEEEEeCc
Q 028297          132 EYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP  188 (211)
Q Consensus       132 ~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V~v~~~~~~~  188 (211)
                      ......+.+  ....+||+||||||++|||+|+.+|++.|+++| +++|++++++++.
T Consensus        84 ~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~  139 (181)
T 1a3c_A           84 EPLVKGADI--PVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG  139 (181)
T ss_dssp             CCEEEEEEC--SSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             eeeeccccc--CcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence            000112222  223589999999999999999999999999997 9999999999886

>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A

Probab=99.69  E-value=4.1e-16  Score=123.89  Aligned_cols=120  Identities=14%  Similarity=0.203  Sum_probs=85.4

Q ss_pred             hcCHHHHHHHHHHHHHHHhhc---CC-cEEEEecCCccchHHHHHHHhCCCeE--EeecCCCCCCceeeeeeeeecCcee
Q 028297           64 LLDHKAFKDTVDIFVDRYRDM---GI-SVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDR  137 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~~---~~-d~Iv~i~~gG~~~A~~lA~~L~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~  137 (211)
                      +.+++..+...+.++.++.+.   .. ++|+|++.||+.+|..+|+.|++|+.  .+++.........       .+.-.
T Consensus         8 l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~~~~~-------~~~v~   80 (177)
T 3ohp_A            8 MISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGNSMQS-------SRDVR   80 (177)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC---------------CCCC
T ss_pred             eeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcCCCcc-------CCcEE
Confidence            345566666677777777543   24 89999999999999999999999863  3443221111000       01111


Q ss_pred             EEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297          138 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG  190 (211)
Q Consensus       138 ~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~  190 (211)
                      +........+||+||||||+++||+|+.++++.|++.|++++.++++++++.+
T Consensus        81 i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~~  133 (177)
T 3ohp_A           81 ILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPTR  133 (177)
T ss_dssp             EEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred             EecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCcc
Confidence            22111223589999999999999999999999999999999999999999864

>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.67  E-value=3.6e-16  Score=124.19  Aligned_cols=119  Identities=17%  Similarity=0.146  Sum_probs=80.3

Q ss_pred             cCHHHHHHHHHHHHHHHhhc----CCcEEEEecCCccchHHHHHHHhC----CCeE--EeecCCCCCCceeeeeeeeecC
Q 028297           65 LDHKAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAIG----AKFV--PLRKPNKLPGEVISEAYVLEYG  134 (211)
Q Consensus        65 ~~~~~~~~~~~~la~~i~~~----~~d~Iv~i~~gG~~~A~~lA~~L~----~p~~--~~~k~~~~~~~~~~~~~~~~~~  134 (211)
                      .++.........++.++.+.    +.++|+|++.||+++|..+|+.|+    +|+.  .+++...........   ....
T Consensus         8 ~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~   84 (181)
T 1ufr_A            8 MNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDLTEIG---YRPQ   84 (181)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------CE
T ss_pred             cCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccc---ccce
Confidence            34455555556666666432    457999999999999999999887    7763  233221110000000   0000


Q ss_pred             ceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEEEEEEEEeCc
Q 028297          135 TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP  188 (211)
Q Consensus       135 ~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V~v~~~~~~~  188 (211)
                      ...+.+ ... .+||+||||||++|||+|+.+|++.|+++| +++|.++++++++
T Consensus        85 ~~~~~~-~~~-~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~  137 (181)
T 1ufr_A           85 VRETRI-PFD-LTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG  137 (181)
T ss_dssp             EEEEEE-CSC-CTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             eccccc-CcC-CCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence            112222 233 589999999999999999999999999999 9999999999886

>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*

Probab=99.66  E-value=3.4e-16  Score=121.31  Aligned_cols=111  Identities=21%  Similarity=0.276  Sum_probs=82.8

Q ss_pred             hcCHHHHHHHHHHHHHHHhh-cCCcEEEEecCCccchHHHHHHHhCCC-eEEeecCCCCCCceeeeeeeeecCceeEEEe
Q 028297           64 LLDHKAFKDTVDIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAK-FVPLRKPNKLPGEVISEAYVLEYGTDRLEMH  141 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~-~~~d~Iv~i~~gG~~~A~~lA~~L~~p-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~  141 (211)
                      +.++...+..+..+++++.+ .+.++|+|++.||+.+|..+|+.|++| +..++..... ..          +.+.+.+.
T Consensus         6 l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y~-~~----------~~~~~~~~   74 (152)
T 1nul_A            6 IVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYD-HD----------NQRELKVL   74 (152)
T ss_dssp             ECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEEE
T ss_pred             ecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEec-Cc----------ccceEEEe
Confidence            45667777788889988875 356899999999999999999999999 6555422211 00          00111222


Q ss_pred             cCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297          142 VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG  190 (211)
Q Consensus       142 ~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~  190 (211)
                      .+...+||+||||||+++||+|+.++++.|++     +.++++++++..
T Consensus        75 ~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~~~  118 (152)
T 1nul_A           75 KRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPAG  118 (152)
T ss_dssp             ECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGGG
T ss_pred             cCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECCCC
Confidence            22235899999999999999999999999986     789999999853

>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1

Probab=99.62  E-value=1.9e-15  Score=122.26  Aligned_cols=121  Identities=17%  Similarity=0.195  Sum_probs=82.8

Q ss_pred             HhcCHHHHHHHHHHHHHHHhhc-----------CCcEEEEecCCccchHHHHHHHh----CCCeEE--eecCCCCCCcee
Q 028297           63 LLLDHKAFKDTVDIFVDRYRDM-----------GISVVAGIEARGFVFGPSIALAI----GAKFVP--LRKPNKLPGEVI  125 (211)
Q Consensus        63 l~~~~~~~~~~~~~la~~i~~~-----------~~d~Iv~i~~gG~~~A~~lA~~L----~~p~~~--~~k~~~~~~~~~  125 (211)
                      ++.+++..+...+.++.++.+.           +.++|++++.||+++|..+|+.|    ++|+..  +...........
T Consensus        15 ~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~~~~~   94 (201)
T 1w30_A           15 ELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDLMI   94 (201)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC----
T ss_pred             EEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecCCccc
Confidence            4456677777777777666432           45799999999999999999998    576432  322211100000


Q ss_pred             eeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEEEEEEEEeCc
Q 028297          126 SEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP  188 (211)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V~v~~~~~~~  188 (211)
                      ..    ......+.+ .....+||+||||||++|||+|+.++++.|+++| +++|.++++++++
T Consensus        95 ~~----~~~~~~~~~-~~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~  153 (201)
T 1w30_A           95 KP----PRPLASTSI-PAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG  153 (201)
T ss_dssp             --------CCCCCBC-CTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             cc----cceeecccC-CCccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence            00    000011111 1122589999999999999999999999999999 9999999999985

>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*

Probab=99.60  E-value=1.8e-15  Score=137.76  Aligned_cols=115  Identities=16%  Similarity=0.158  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHhh----cCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCce--eeeeeeeecCceeEEEecCC
Q 028297           72 DTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEV--ISEAYVLEYGTDRLEMHVGA  144 (211)
Q Consensus        72 ~~~~~la~~i~~----~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  144 (211)
                      .+++.|++++.+    .++|+|+++|.+|+.+|..+|+.+++|+.. +.|.+....+.  ..+..+....+..+......
T Consensus       277 ~lg~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~~~t~i~~~~~~R~~~v~~~~~~~~~~  356 (504)
T 1ecf_A          277 NMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAE  356 (504)
T ss_dssp             HHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCCCCCCCCSSSCCCCCCSTTTEEECGGG
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEecccCCceeCccHHHHHHHHHhhhcccccc
Confidence            556666665532    347999999999999999999999999863 33332211111  01111111112234432333


Q ss_pred             cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeC
Q 028297          145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL  187 (211)
Q Consensus       145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~  187 (211)
                       .+||+||||||++|||+|+.+++++|+++||++|++++++..
T Consensus       357 -v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~~  398 (504)
T 1ecf_A          357 -FRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPE  398 (504)
T ss_dssp             -TTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCC
T ss_pred             -CCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEecC
Confidence             599999999999999999999999999999999999998744

>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*

Probab=99.58  E-value=7.7e-15  Score=120.36  Aligned_cols=125  Identities=14%  Similarity=0.157  Sum_probs=84.4

Q ss_pred             hcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCC------CeEEeecCCCCCCceeeeeeeeecCcee
Q 028297           64 LLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGA------KFVPLRKPNKLPGEVISEAYVLEYGTDR  137 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~------p~~~~~k~~~~~~~~~~~~~~~~~~~~~  137 (211)
                      +.+....+..++.|+.++.+.++++|+|++.||+.+|..||+.|++      |+..++............ .....+...
T Consensus         8 ~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~-~~~~~g~~~   86 (221)
T 2xbu_A            8 YISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGS-EVEEVGVKV   86 (221)
T ss_dssp             ECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC--------------CEE
T ss_pred             ecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCccccc-cccccCcee
Confidence            3455666777888888885557899999999999999999999998      343333111000000000 000001111


Q ss_pred             EE---Ee---cCCcCCCCEEEEEeccccchHHHHHHHHHHHh--------CCC---------eEEEEEEEEeCch
Q 028297          138 LE---MH---VGAIEPGERALVIDDLVATGGTLSAAVRLLER--------MGA---------EVVECACVVGLPE  189 (211)
Q Consensus       138 ~~---~~---~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~--------~Ga---------~~V~v~~~~~~~~  189 (211)
                      +.   ..   .....+||+||||||+++||+||.++++.|++        .|+         +.+.++|+++++.
T Consensus        87 ~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~  161 (221)
T 2xbu_A           87 SRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK  161 (221)
T ss_dssp             EEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred             eeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence            11   10   02335999999999999999999999999997        786         5899999999875

>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*

Probab=99.53  E-value=1e-13  Score=110.35  Aligned_cols=120  Identities=19%  Similarity=0.200  Sum_probs=84.2

Q ss_pred             HhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCcee
Q 028297           63 LLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTDR  137 (211)
Q Consensus        63 l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~  137 (211)
                      ++.+.+..+...+.+|.+|.+.   +..+++|+..||+.+|..|++.++.|...  +.-.... +...      ..+...
T Consensus        12 vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ssy~-~~~~------~~g~~~   84 (181)
T 3acd_A           12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYG-NAFK------SSGEVE   84 (181)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-------------------C
T ss_pred             EEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEEec-CCcC------CCCceE
Confidence            3445666666677777776543   34689999999999999999999988643  2211110 0000      001111


Q ss_pred             EEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          138 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       138 ~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                      +........+||+|||||||++||.|+.++.+.|++.|++.+.+++++++..
T Consensus        85 ~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~~  136 (181)
T 3acd_A           85 LLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS  136 (181)
T ss_dssp             EEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred             eccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcCc
Confidence            2111233359999999999999999999999999999999999999999775

>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*

Probab=99.52  E-value=2.3e-14  Score=129.17  Aligned_cols=115  Identities=22%  Similarity=0.213  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCce--eeeeeeeecCceeEEEecCCc
Q 028297           69 AFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEV--ISEAYVLEYGTDRLEMHVGAI  145 (211)
Q Consensus        69 ~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  145 (211)
                      ....+++.+++.+. .+.|+|+++|.+|..+|..+|+.+++|+.. +.|.+....+.  .++..+....+..+....+. 
T Consensus       258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~~~~-  335 (459)
T 1ao0_A          258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVRGV-  335 (459)
T ss_dssp             HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEECHHH-
T ss_pred             HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhccccccc-
Confidence            34467777777664 367999999999999999999999999863 44433211111  01111111112234432233 


Q ss_pred             CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEE
Q 028297          146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV  185 (211)
Q Consensus       146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~  185 (211)
                      .+||+||||||++|||+|+.++++.|+++||++|++++++
T Consensus       336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~  375 (459)
T 1ao0_A          336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISS  375 (459)
T ss_dssp             HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred             CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence            4899999999999999999999999999999999999943

>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*

Probab=99.35  E-value=1.1e-12  Score=108.19  Aligned_cols=110  Identities=8%  Similarity=0.153  Sum_probs=78.2

Q ss_pred             hcCHHHHHHHHHHHHHHHhhc-----CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCce
Q 028297           64 LLDHKAFKDTVDIFVDRYRDM-----GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTD  136 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~~-----~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~  136 (211)
                      +-+++......+.+|+++.+.     +.++|+|++.||+.+|..+|+.|++|+..  ++..+. .+.         ... 
T Consensus        35 lis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs~y-~~~---------~s~-  103 (230)
T 1dqn_A           35 LATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSSY-KGT---------RQE-  103 (230)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEEE-ECS---------SCE-
T ss_pred             ecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEEEe-CCC---------ccC-
Confidence            345555666666777666532     45799999999999999999999999743  222111 000         001 


Q ss_pred             eEEE-ec--CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          137 RLEM-HV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       137 ~~~~-~~--~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                      ...+ ..  ....+||+|||||||++||.||.++++.|++     +.++++++++.
T Consensus       104 ~v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~  154 (230)
T 1dqn_A          104 SVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDV  154 (230)
T ss_dssp             EEECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCH
T ss_pred             ceEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCc
Confidence            1221 11  1124899999999999999999999999988     88999999886

>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1

Probab=99.33  E-value=3.9e-12  Score=104.07  Aligned_cols=98  Identities=18%  Similarity=0.247  Sum_probs=75.2

Q ss_pred             cEEEEecCCccchHHHHHHHh-CCCeEEeecCCCCCCceeeeeeeeecCceeE-EEecCCcCCCCEEEEEeccccchHHH
Q 028297           87 SVVAGIEARGFVFGPSIALAI-GAKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTL  164 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLIVDDiitTG~Tl  164 (211)
                      -++|+|.++|+.++..+++.+ ++++..+...+....           ++... ....+...+||+|+||||+++||+|+
T Consensus        84 lviV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~t-----------~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl  152 (221)
T 1o5o_A           84 IVVVPILRAGLVMADGILELLPNASVGHIGIYRDPET-----------LQAVEYYAKLPPLNDDKEVFLLDPMLATGVSS  152 (221)
T ss_dssp             EEEEEEETTHHHHHHHHHHHSTTCEECEEEEEECTTT-----------CCEEEEEEECCCCCTTCEEEEECSEESSSHHH
T ss_pred             EEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEcCCC-----------CceeEEEecCCCccCCCEEEEECCccccHHHH
Confidence            488999999999999999999 566554443332110           00011 11223335899999999999999999


Q ss_pred             HHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297          165 SAAVRLLERMGAEVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       165 ~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~  195 (211)
                      .++++.|++.|++.+.++|++..+++.++|.
T Consensus       153 ~~ai~~L~~~G~~~I~~~~lv~~~~g~~~l~  183 (221)
T 1o5o_A          153 IKAIEILKENGAKKITLVALIAAPEGVEAVE  183 (221)
T ss_dssp             HHHHHHHHHTTCCEEEEECSEECHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence            9999999999999999999999988888875

>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1

Probab=99.32  E-value=6.1e-12  Score=102.22  Aligned_cols=99  Identities=21%  Similarity=0.271  Sum_probs=74.0

Q ss_pred             CcEEEEecCCccchHHHHHHHh-CCCeEEeecCCCCCCceeeeeeeeecCce-eEEEecCCcCCCCEEEEEeccccchHH
Q 028297           86 ISVVAGIEARGFVFGPSIALAI-GAKFVPLRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGT  163 (211)
Q Consensus        86 ~d~Iv~i~~gG~~~A~~lA~~L-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gk~VLIVDDiitTG~T  163 (211)
                      ..+++++.++|+.++..+.+.+ +.++..+.+.+....           .+. .+....+...+||+|||||||++||+|
T Consensus        71 ~~~vV~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~~t-----------~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T  139 (209)
T 1i5e_A           71 KLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDPQT-----------LKPVEYYVKLPSDVEERDFIIVDPMLATGGS  139 (209)
T ss_dssp             CEEEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCTTC-----------SSCEEEEEECCTTTTTSEEEEECSEESSSHH
T ss_pred             ceEEEEEecCChHHHHHHHHhCCCCeEEEEEEEEcCCC-----------CceEEEEEcCCCccCCCEEEEEcCCCcCHHH
Confidence            3588999999999999999988 455544433221111           011 111122333589999999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297          164 LSAAVRLLERMGAEVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       164 l~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~  195 (211)
                      +.++++.|+++|++.|.+++++..+++.+++.
T Consensus       140 ~~~a~~~L~~~G~~~I~~~~lv~~~~g~~~l~  171 (209)
T 1i5e_A          140 AVAAIDALKKRGAKSIKFMCLIAAPEGVKAVE  171 (209)
T ss_dssp             HHHHHHHHHHTTCCCEEEECSEECHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEEEEEECHHHHHHHH
Confidence            99999999999999999999999888777775

>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}

Probab=99.20  E-value=1.1e-10  Score=94.61  Aligned_cols=97  Identities=21%  Similarity=0.251  Sum_probs=72.1

Q ss_pred             cEEEEecCCccchHHHHHHHhC-CCeEEeecCC-CCCCceeeeeeeeecCceeE-EEecCCcCCCCEEEEEeccccchHH
Q 028297           87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPN-KLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGT  163 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLIVDDiitTG~T  163 (211)
                      -++|++-++|+.++..+.+.+. +++..+.-.+ ....            +... ....+...+||+|+||||+++||+|
T Consensus        71 l~~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd~~t~------------~~~~~~~~lp~di~~r~VilvDd~laTG~T  138 (208)
T 2ehj_A           71 ITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETL------------EPVPYFQKLVSNIDERMALIVDPMLATGGS  138 (208)
T ss_dssp             CEEEEBTTGGGGGHHHHHHHCTTCEECEEEEEECTTTC------------CEEEEEEECCSCGGGCEEEEEEEEESSCHH
T ss_pred             eEEEEeecCHHHHHHHHHHhCCcCceeEEEEEEcCCCC------------ceEEEecCCCCccCCCEEEEECCccccHHH
Confidence            4899999999999999999885 2222221111 1111            1111 1122333589999999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297          164 LSAAVRLLERMGAEVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       164 l~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~  195 (211)
                      +.++++.|++.|++.+.++|++..+++.+++.
T Consensus       139 ~~~ai~~L~~~G~~~I~~~~lv~~p~g~~~l~  170 (208)
T 2ehj_A          139 VIATIDLLKKAGCSSIKVLVLVAAPEGIAALE  170 (208)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEEEECHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence            99999999999999999999999998777775

>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}

Probab=99.19  E-value=1.6e-10  Score=93.65  Aligned_cols=96  Identities=23%  Similarity=0.285  Sum_probs=72.1

Q ss_pred             cEEEEecCCccchHHHHHHHhC-CCeEEeecCC-CCCCceeeeeeeeecCceeE-EEecCCcCCCCEEEEEeccccchHH
Q 028297           87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPN-KLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGT  163 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLIVDDiitTG~T  163 (211)
                      -++|++-++|+.++..+.+.+. +++..+...+ ....            +... ....+ ..+||+|+||||+++||+|
T Consensus        70 ~~~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd~~t~------------~~~~~~~~lp-di~~r~vilvDd~laTG~T  136 (208)
T 2e55_A           70 IVFVPILRAGLSFLEGALQVVPNAKVGFLGIKRNEETL------------ESHIYYSRLP-ELKGKIVVILDPMLATGGT  136 (208)
T ss_dssp             EEEEEEETTTHHHHHHHHHHSTTCEECEEEEEECTTTC------------CEEEEEEECC-CCBTSEEEEECSEESSSHH
T ss_pred             EEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEecCCC------------ceEEEecCCC-CCCCCEEEEECCccccHHH
Confidence            4888999999999999999886 2222221111 1111            1111 12224 4589999999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297          164 LSAAVRLLERMGAEVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       164 l~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~  195 (211)
                      +.++++.|++.|++.+.+++++..+++.++|.
T Consensus       137 ~~~ai~~L~~~G~~~I~~~~lv~~~~g~~~l~  168 (208)
T 2e55_A          137 LEVALREILKHSPLKVKSVHAIAAPEGLKRIE  168 (208)
T ss_dssp             HHHHHHHHHTTCBSEEEEEEEEECHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEEEEEECHHHHHHHH
Confidence            99999999999999999999999988877775

>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1

Probab=99.14  E-value=7.5e-11  Score=95.65  Aligned_cols=98  Identities=24%  Similarity=0.295  Sum_probs=71.2

Q ss_pred             cEEEEecCCccchHHHHHHHhC-CCeEEeecCCCCCCceeeeeeeeecCceeE-EEecCCcCCCCEEEEEeccccchHHH
Q 028297           87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTL  164 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLIVDDiitTG~Tl  164 (211)
                      -++|++-++|+.++..+.+.+. +++..+.-.+..  .+         ++... ....+...+||+|+||||+++||+|+
T Consensus        71 l~~V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd~--~t---------~~~~~~~~~lp~di~~r~vilvDd~laTG~T~  139 (208)
T 1v9s_A           71 LALVAILRAGLVMVEGILKLVPHARVGHIGLYRDP--ES---------LNPVQYYIKLPPDIAERRAFLLDPMLATGGSA  139 (208)
T ss_dssp             CEEEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHHH
T ss_pred             eEEEEeccchHHHHHHHHHhCCCCeeeEEEEEEcC--CC---------CCceEEeccCCCccCCCEEEEECCccccHHHH
Confidence            4899999999999999998875 233222222110  00         01011 11223334899999999999999999


Q ss_pred             HHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297          165 SAAVRLLERMGAEVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       165 ~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~  195 (211)
                      .++++.|++.|++.+.++|++..+++.+++.
T Consensus       140 ~~ai~~L~~~G~~~I~~~~lv~~~~g~~~l~  170 (208)
T 1v9s_A          140 SLALSLLKERGATGVKLMAILAAPEGLERIA  170 (208)
T ss_dssp             HHHHHHHHHTTCCSCEEEEEEECHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence            9999999999999999999999988888775

>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*

Probab=99.13  E-value=2.5e-10  Score=94.54  Aligned_cols=111  Identities=15%  Similarity=0.209  Sum_probs=77.8

Q ss_pred             cEEEEecCCccchHHHHHHHhC-CCeEEeecCC-CCCCceeeeeeeeecCceeE-EEecCCcCCCCEEEEEeccccchHH
Q 028297           87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPN-KLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGT  163 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLIVDDiitTG~T  163 (211)
                      -++|++-++|+.++..+.+.+. +++..+.-.+ ....            +..+ ....+...+||+|+||||+++||+|
T Consensus       104 l~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd~~t~------------~~~~~~~~lp~di~~r~VilvDdmlaTG~T  171 (243)
T 1bd3_D          104 ICGVSIVRAGESMESGLRAVCRGVRIGKILIQRDETTA------------EPKLIYEKLPADIRERWVMLLDPMCATAGS  171 (243)
T ss_dssp             EEEEEEETTTHHHHHHHHHHSTTCCEEEEEEEECSSSC------------CEEEEEEECCTTGGGSEEEEECSEESSCHH
T ss_pred             EEEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEcCCCC------------CeEEEeccCCcccCCCEEEEECCccccHHH
Confidence            3688899999999999999885 3433222111 1111            1112 1222333589999999999999999


Q ss_pred             HHHHHHHHHhCCC--eEEEEEEEEeCchhhcccC----CCCeEEEEccccccc
Q 028297          164 LSAAVRLLERMGA--EVVECACVVGLPEGQRRLD----GKPLYILVEPRLSVN  210 (211)
Q Consensus       164 l~~a~~~L~~~Ga--~~V~v~~~~~~~~~~~~l~----~~~l~sl~~~~~~~~  210 (211)
                      +.++++.|++.|+  +.+.++|++..+++.++|.    ++.+.. ..+++.+|
T Consensus       172 ~~~ai~~L~~~G~~p~~I~~~~lvaap~g~~~l~~~~p~v~I~t-a~ID~~Ln  223 (243)
T 1bd3_D          172 VCKAIEVLLRLGVKEERIIFVNILAAPQGIERVFKEYPKVRMVT-AAVDICLN  223 (243)
T ss_dssp             HHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHHHHHCTTSEEEE-EEECSEEC
T ss_pred             HHHHHHHHHHcCCCcceEEEEEEEeCHHHHHHHHHHCCCCEEEE-EEecCCcC
Confidence            9999999999999  9999999999988877775    444443 34444443

>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1

Probab=98.98  E-value=1e-09  Score=89.54  Aligned_cols=96  Identities=19%  Similarity=0.189  Sum_probs=71.4

Q ss_pred             cEEEEecCCccchHHHHHHHhC-CCeEEeecCCCC-CCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHH
Q 028297           87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKL-PGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL  164 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl  164 (211)
                      -++|++-++|..++..+.+.+. +++..+...|.. .+..            ......+ ..+|++|+|+||++.||+|+
T Consensus        79 i~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd~~t~p~------------~~~~~lP-~i~~~~VilvD~~laTG~T~  145 (217)
T 3dmp_A           79 LAIVPVLRAGVGMSDGLLELIPSARVGHIGVYRADDHRPV------------EYLVRLP-DLEDRIFILCDPMVATGYSA  145 (217)
T ss_dssp             EEEEEEETTTHHHHHHHHHHCTTSEECEEECSCCCSSSCC------------CSEEECC-CCTTCEEEEECSEESSSHHH
T ss_pred             EEEEEecccchHHHHHHHHhCcCCceeEEEEEECCCCCcE------------EEeecCC-CCCCCEEEEEcCcccccHHH
Confidence            4788999999999999999984 444333211110 0100            0111224 35899999999999999999


Q ss_pred             HHHHHHHHhCCC--eEEEEEEEEeCchhhcccC
Q 028297          165 SAAVRLLERMGA--EVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       165 ~~a~~~L~~~Ga--~~V~v~~~~~~~~~~~~l~  195 (211)
                      .+|++.|++.|+  +.+.++|++..++|.+++.
T Consensus       146 ~~ai~~L~~~G~pe~~I~~~~~vaa~egl~~l~  178 (217)
T 3dmp_A          146 AHAIDVLKRRGVPGERLMFLALVAAPEGVQVFQ  178 (217)
T ss_dssp             HHHHHHHHTTTCCGGGEEEECSEECHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcCeEEEEEEEeCHHHHHHHH
Confidence            999999999999  9999999999888777764

>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*

Probab=98.80  E-value=1.3e-08  Score=82.85  Aligned_cols=102  Identities=10%  Similarity=0.098  Sum_probs=69.8

Q ss_pred             cEEEEecCCccchHHHHHHHhC-CCeEEee-cCCCCCCceeeeeeeeecCceeE-EEecCCcCCCC--EEEEEeccccch
Q 028297           87 SVVAGIEARGFVFGPSIALAIG-AKFVPLR-KPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGE--RALVIDDLVATG  161 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~-k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk--~VLIVDDiitTG  161 (211)
                      -++|++-++|..++..+.+.+. ++...+. .|....+....     ...+... ....+ ..+++  +|+|+||++.||
T Consensus        73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~~~-----~~~~p~~~y~klP-~i~~~~~~VilvDp~laTG  146 (216)
T 1xtt_A           73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVP-----KDMDVYIYYKKIP-DIRAKVDNVIIADPMIATA  146 (216)
T ss_dssp             EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSCC-----SCCCEEEEEEECC-CCCTTTCEEEEECSEESSS
T ss_pred             EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCcccccc-----cccCceEeeccCC-CccCCcceEEEEcCCccch
Confidence            4788999999999999999874 3443221 11111100000     0000111 12224 35888  999999999999


Q ss_pred             HHHHHHHHHHHhCCC-eEEEEEEEEeCchhhcccC
Q 028297          162 GTLSAAVRLLERMGA-EVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       162 ~Tl~~a~~~L~~~Ga-~~V~v~~~~~~~~~~~~l~  195 (211)
                      +|+.+|++.|++ |+ +.+.++|++..+++.+++.
T Consensus       147 ~T~~~ai~~L~~-G~p~~I~~~~~vaa~~gl~~l~  180 (216)
T 1xtt_A          147 STMLKVLEEVVK-ANPKRIYIVSIISSEYGVNKIL  180 (216)
T ss_dssp             HHHHHHHHHHGG-GCCSEEEEECSEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHh-CCCCeEEEEEEecCHHHHHHHH
Confidence            999999999999 99 9999999998888777764

>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}

Probab=88.34  E-value=3.7  Score=34.76  Aligned_cols=76  Identities=17%  Similarity=0.194  Sum_probs=49.6

Q ss_pred             CccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchH----HHHHHHHH
Q 028297           95 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG----TLSAAVRL  170 (211)
Q Consensus        95 gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~----Tl~~a~~~  170 (211)
                      +.-.+|..+|+.||+|+..+..++-..++.            .+.+  ....+|++|.||-.....-.    -+.-++++
T Consensus        15 ~~~~La~~ia~~lg~~l~~~~~~~F~dGE~------------~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA   80 (319)
T 3dah_A           15 ANPALAQEVVKILGIPLGKAMVSRFSDGEI------------QVEI--QENVRGKDVFVLQSTCAPTNDNLMELMIMVDA   80 (319)
T ss_dssp             SCHHHHHHHHHHHTSCCCCEEEEECTTSCE------------EEEE--CSCCBTCEEEEECCCCSSHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCceeeeEEEECCCCCE------------EEEE--CCCcCCCeEEEEccCCCCCcHHHHHHHHHHHH
Confidence            334699999999999876644333222321            2333  34459999999977654322    14567788


Q ss_pred             HHhCCCeEEEEEEE
Q 028297          171 LERMGAEVVECACV  184 (211)
Q Consensus       171 L~~~Ga~~V~v~~~  184 (211)
                      ++.+||+++.++.-
T Consensus        81 ~k~asA~rIt~ViP   94 (319)
T 3dah_A           81 LKRASAGRITAAIP   94 (319)
T ss_dssp             HHHTTBSEEEEEES
T ss_pred             HHHcCCcEEEEEcc
Confidence            89999998865543

>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*

Probab=86.77  E-value=3.5  Score=34.14  Aligned_cols=73  Identities=10%  Similarity=0.070  Sum_probs=48.0

Q ss_pred             cchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hH--HHHHHHHHHHh
Q 028297           97 FVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG--TLSAAVRLLER  173 (211)
Q Consensus        97 ~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~--Tl~~a~~~L~~  173 (211)
                      -.+|..+|+.||+|+..+..++-..++.            .+.+  ....+|++|.|+-..... -.  -+.-+++++++
T Consensus        10 ~~la~~ia~~l~~~l~~~~~~~F~dGE~------------~v~i--~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~~   75 (284)
T 1u9y_A           10 QNLAFKVAKLLNTKLTRVEYKRFPDNEI------------YVRI--VDEINDDEAVIINTQKNQNDAIVETILLCDALRD   75 (284)
T ss_dssp             HHHHHHHHHHTTCCEECEEEEECTTCCE------------EEEE--CSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCeeeeeEEEECCCCCE------------EEEe--CCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHH
Confidence            4689999999999987654333222321            2332  334589999999886542 11  24456788899


Q ss_pred             CCCeEEEEEE
Q 028297          174 MGAEVVECAC  183 (211)
Q Consensus       174 ~Ga~~V~v~~  183 (211)
                      +||+.+.++.
T Consensus        76 ~~a~~i~~v~   85 (284)
T 1u9y_A           76 EGVKKITLVA   85 (284)
T ss_dssp             TTCCEEEEEC
T ss_pred             cCCceEEEEe
Confidence            9999875543

>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A

Probab=84.42  E-value=9.4  Score=32.31  Aligned_cols=74  Identities=15%  Similarity=0.118  Sum_probs=47.7

Q ss_pred             ccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hH---HHHHHHHHH
Q 028297           96 GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG---TLSAAVRLL  171 (211)
Q Consensus        96 G~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~---Tl~~a~~~L  171 (211)
                      .-.+|..+|+.||+|+..+..++-..++.            .+++  ....+|++|.||-..... -.   -+.-+++++
T Consensus        12 ~~~La~~ia~~lg~~l~~~~~~~F~dGE~------------~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~   77 (326)
T 3s5j_B           12 HQDLSQKIADRLGLELGKVVTKKFSNQET------------CVEI--GESVRGEDVYIVQSGCGEINDNLMELLIMINAC   77 (326)
T ss_dssp             CCHHHHHHHHHTTCCCCCEEEEECTTSCE------------EEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhCCceeeeEEeECCCCCE------------EEEE--CCCcCCCcEEEEecCCCCccHHHHHHHHHHHHH
Confidence            34699999999999986544333222322            2333  344599999999865432 11   233566788


Q ss_pred             HhCCCeEEEEEE
Q 028297          172 ERMGAEVVECAC  183 (211)
Q Consensus       172 ~~~Ga~~V~v~~  183 (211)
                      +.+||+++.++.
T Consensus        78 k~asA~rIt~Vi   89 (326)
T 3s5j_B           78 KIASASRVTAVI   89 (326)
T ss_dssp             HHTTCSEEEEEE
T ss_pred             HhcCCcEEEEec
Confidence            999999886643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	211
d1zn7a1	178	c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sap	2e-38
d1qb7a_	236	c.61.1.1 (A:) Adenine PRTase {Leishmania donovani	4e-37
d1g2qa_	178	c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Sacch	4e-35
d1l1qa_	181	c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [Tax	6e-34
d1o57a2	202	c.61.1.1 (A:75-276) Pur operon repressor (PurR), C	1e-32
d1y0ba1	191	c.61.1.1 (A:1-191) Xanthine phosphoribosyltransfer	7e-31
d1vcha1	174	c.61.1.1 (A:2-175) Putative phosphoribosyltransfer	3e-29
d1wd5a_	208	c.61.1.1 (A:) Putative phosphoribosyltransferase T	3e-06
d2aeea1	208	c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus p	1e-05
d1nula_	150	c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {E	2e-04
d1xtta1	215	c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus	8e-04
d1v9sa1	208	c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus the	0.002
d1i5ea_	208	c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldoly	0.004

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]} Length = 178

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (324), Expect = 2e-38
 Identities = 63/156 (40%), Positives = 99/156 (63%), Gaps = 5/156 (3%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAK 110
           G++F+DI+ +L D  +F+  + +     +      I  +AG+++RGF+FGPS+A  +G  
Sbjct: 21  GVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLG 80

Query: 111 FVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRL 170
            V +RK  KLPG  +  +Y LEYG   LE+   A+EPG+R +V+DDL+ATGGT++AA  L
Sbjct: 81  CVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACEL 140

Query: 171 LERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE 204
           L R+ AEV+EC  +V L    G+ +L   P + L++
Sbjct: 141 LGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQ 176

>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]} Length = 236

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Leishmania donovani [TaxId: 5661]

 Score =  127 bits (319), Expect = 4e-37
 Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 8/149 (5%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISV--VAGIEARGFVFGPSIALAIGAKF 111
              F D++++    +  K   D  V RYR M  +   + G +ARGF+FGP IA+ +   F
Sbjct: 38  VPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPF 97

Query: 112 VPLRKPNKLPGEVI-SEAYVLEY---GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAA 167
           V +RK +K  G +I SE Y  EY     + + +  G+I  G R ++IDD++ATGGT  + 
Sbjct: 98  VLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSG 157

Query: 168 VRLLERMGAEVVECACVVGLPE--GQRRL 194
           ++L+E   A VVE   ++ +P      ++
Sbjct: 158 LQLVEASDAVVVEMVSILSIPFLKAAEKI 186

>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 178

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  120 bits (302), Expect = 4e-35
 Identities = 57/156 (36%), Positives = 95/156 (60%), Gaps = 7/156 (4%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVD----RYRDMGISVVAGIEARGFVFGPSIALAIGA 109
           GI+F+D   +  +   F+  +D F       + ++ I  + G+E+RGF+FGP++ALA+G 
Sbjct: 24  GILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGV 83

Query: 110 KFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVR 169
            FVP+RK  KLPGE     Y  EYG+D  E+   AI  G   +++DD++ATGG+ +AA  
Sbjct: 84  GFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGE 143

Query: 170 LLERMGAEVVECACVVGLPE--GQRRLDGKPLYILV 203
           L+E++ A ++E   V+ L    G+ +L+  P++ L+
Sbjct: 144 LVEQLEANLLEYNFVMELDFLKGRSKLNA-PVFTLL 178

>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId: 5741]} Length = 181

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Giardia lamblia [TaxId: 5741]

 Score =  117 bits (294), Expect = 6e-34
 Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 7/158 (4%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
           GI F+D++ +L    A           Y+D+ I+ V GIE+RGF+ G  +A ++G  FV 
Sbjct: 21  GIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVA 80

Query: 114 LRKPNKLPGEVISEAYVLEYGTDR-LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLE 172
           LRK  KLPG+V    + +EY     +E+    + P +  L+ DD++ATGGTL AA+ L E
Sbjct: 81  LRKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCE 140

Query: 173 RMGA--EVVECACVVGLPE--GQRRLD--GKPLYILVE 204
             G   E +    +  +    G+ ++      L+ ++ 
Sbjct: 141 TAGVKPENIYINVLYEIEALKGREKVGQKCTRLFSVIR 178

>d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal domain {Bacillus subtilis [TaxId: 1423]} Length = 202

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pur operon repressor (PurR), C-terminal domain
species: Bacillus subtilis [TaxId: 1423]

 Score =  114 bits (287), Expect = 1e-32
 Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 5/153 (3%)

Query: 57  FQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRK 116
           +  +T +L           +F   + +  I VV  +  +G     + A  +    V +RK
Sbjct: 28  YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRK 87

Query: 117 PNKLP-GEVISEAYVLEYG--TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLER 173
            NK+  G  +S  YV         + +   +++ G   L+IDD +  GGT++  + LL+ 
Sbjct: 88  DNKVTEGSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDE 147

Query: 174 MGAEVVECACVVGLPEGQRRL--DGKPLYILVE 204
             A V     +V       RL  +   L  L  
Sbjct: 148 FNANVAGIGVLVEAEGVDERLVDEYMSLLTLST 180

>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]} Length = 191

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine phosphoribosyltransferase
species: Bacillus subtilis [TaxId: 1423]

 Score =  109 bits (274), Expect = 7e-31
 Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 11/156 (7%)

Query: 59  DITTLL---LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR 115
            + + L   +D    +   D F  R+   GI+ +  IE+ G        L +G   V  R
Sbjct: 21  KVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFAR 80

Query: 116 KPNKLPGE----VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLL 171
           K   L         S     +    ++ +    +   +  L+IDD +A G      V ++
Sbjct: 81  KHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIV 140

Query: 172 ERMGAEVVECACVVGLPE--GQRRLD--GKPLYILV 203
           ++ GA +     V+      G+  L   G  +  L 
Sbjct: 141 KQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLA 176

>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]} Length = 174

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TTHA1613
species: Thermus thermophilus [TaxId: 274]

 Score =  105 bits (262), Expect = 3e-29
 Identities = 28/151 (18%), Positives = 53/151 (35%), Gaps = 8/151 (5%)

Query: 54  GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP 113
                 +   L D +  +   +            ++   E         +A A+G  +V 
Sbjct: 21  PGRRIPLVEFLGDPEFTRAAAEALRPLV-PKEAEILFTTETSPIPLTHVLAEALGLPYVV 79

Query: 114 LRKPNKLPGE--VISEAYVLEYGTDR---LEMHVGAIEPGERALVIDDLVATGGTLSAAV 168
            R+  +   E  +I E   L  G      L+         +R +++ D+VA+G T+ A  
Sbjct: 80  ARRRRRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAME 139

Query: 169 RLLERMGAEVVECACVVGLPEGQRRLDGKPL 199
           +++ R G  VV    V    +G   L    +
Sbjct: 140 KMVLRAGGHVVARLAVFR--QGTPGLAVDTV 168

>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]} Length = 208

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TT1426 (TTHA1462)
species: Thermus thermophilus [TaxId: 274]

 Score = 44.0 bits (103), Expect = 3e-06
 Identities = 17/57 (29%), Positives = 29/57 (50%)

Query: 148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVE 204
           G   +++DD VATG ++ AA+ ++ + G   V  A  V  PE   RL  +   + + 
Sbjct: 120 GRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLKARAEVVALS 176

>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]} Length = 208

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Orotate PRTase
species: Streptococcus pyogenes [TaxId: 1314]

 Score = 42.5 bits (99), Expect = 1e-05
 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 19/141 (13%)

Query: 50  WWAAGIM---FQDITTLLLDHKAFKDTVDIFVDRYRDMG--ISVVAGIEARGFVFGPSIA 104
            WA+GI    + D    L   K      + FV+  +     + V+AG    G   G  IA
Sbjct: 26  TWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIA 85

Query: 105 LAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL 164
             +   F  +R   K                       G +  G++ ++I+DL++TGG++
Sbjct: 86  DKMTLPFAYIRSKPK--------------DHGAGNQIEGRVLKGQKMVIIEDLISTGGSV 131

Query: 165 SAAVRLLERMGAEVVECACVV 185
             A     R GA+V+    + 
Sbjct: 132 LDAAAAASREGADVLGVVAIF 152

>d1nula_ c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {Escherichia coli [TaxId: 562]} Length = 150

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine-guanine PRTase (XPRTase)
species: Escherichia coli [TaxId: 562]

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 10/99 (10%)

Query: 81  YRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEM 140
                   +  +   G V G  +A  +G + V          + +  +         L++
Sbjct: 22  MPSEQWKGIIAVSRGGLVPGALLARELGIRHV----------DTVCISSYDHDNQRELKV 71

Query: 141 HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 179
              A   GE  +VIDDLV TGGT  A   +  +     +
Sbjct: 72  LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTI 110

>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]} Length = 215

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Sulfolobus solfataricus [TaxId: 2287]

 Score = 36.9 bits (85), Expect = 8e-04
 Identities = 5/50 (10%), Positives = 20/50 (40%)

Query: 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL 194
               +  ++ D ++AT  T+   +  + +   + +    ++    G  ++
Sbjct: 129 RAKVDNVIIADPMIATASTMLKVLEEVVKANPKRIYIVSIISSEYGVNKI 178

>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]} Length = 208

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermus thermophilus [TaxId: 274]

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 17/44 (38%), Positives = 28/44 (63%)

Query: 151 ALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL 194
           A ++D ++ATGG+ S A+ LL+  GA  V+   ++  PEG  R+
Sbjct: 126 AFLLDPMLATGGSASLALSLLKERGATGVKLMAILAAPEGLERI 169

>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]} Length = 208

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Bacillus caldolyticus [TaxId: 1394]

 Score = 34.5 bits (79), Expect = 0.004
 Identities = 14/43 (32%), Positives = 30/43 (69%)

Query: 152 LVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL 194
           +++D ++ATGG+  AA+  L++ GA+ ++  C++  PEG + +
Sbjct: 127 IIVDPMLATGGSAVAAIDALKKRGAKSIKFMCLIAAPEGVKAV 169

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	211
d1zn7a1	178	Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]	100.0
d1g2qa_	178	Adenine PRTase {Baker's yeast (Saccharomyces cerev	100.0
d1l1qa_	181	Adenine PRTase {Giardia lamblia [TaxId: 5741]}	99.97
d1qb7a_	236	Adenine PRTase {Leishmania donovani [TaxId: 5661]}	99.96
d1o57a2	202	Pur operon repressor (PurR), C-terminal domain {Ba	99.94
d1y0ba1	191	Xanthine phosphoribosyltransferase {Bacillus subti	99.93
d2aeea1	208	Orotate PRTase {Streptococcus pyogenes [TaxId: 131	99.92
d1vcha1	174	Putative phosphoribosyltransferase TTHA1613 {Therm	99.91
d1lh0a_	213	Orotate PRTase {Salmonella typhimurium [TaxId: 903	99.84
d1u9ya2	129	Phosphoribosylpyrophosphate synthetase {Methanocal	99.81
d1dkua2	149	Phosphoribosylpyrophosphate synthetase {Bacillus s	99.81
d1vdma1	153	Pprobable purine phosphoribosyltransferase PH0095	99.8
d2c4ka2	184	PRPP synthetase-associated protein 1 {Human (Homo	99.73
d1wd5a_	208	Putative phosphoribosyltransferase TT1426 (TTHA146	99.66
d1hgxa_	173	Hypoxanthine-guanine-xanthine PRTase {Tritrichomon	99.59
d1yfza1	178	Xanthine-guanine PRTase (XPRTase) {Thermoanaerobac	99.56
d1nula_	150	Xanthine-guanine PRTase (XPRTase) {Escherichia col	99.54
d1tc1a_	184	Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 569	99.5
d1j7ja_	172	Hypoxanthine PRTase {Salmonella typhimurium [TaxId	99.48
d1pzma_	183	Hypoxanthine-guanine-xanthine PRTase {Leishmania t	99.48
d1cjba_	228	Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium	99.43
d1z7ga1	214	Hypoxanthine-guanine PRTase (HGPRTase) {Human (Hom	99.43
d1ufra_	178	Pyrimidine operon regulator PyrR {Thermus thermoph	99.4
d1fsga_	233	Hypoxanthine-guanine-xanthine PRTase {Toxoplasma g	99.39
d1a3ca_	178	Pyrimidine operon regulator PyrR {Bacillus subtili	99.37
d1w30a_	182	Pyrimidine operon regulator PyrR {Mycobacterium tu	99.36
d1ecfa1	243	Glutamine PRPP amidotransferase, C-terminal domain	99.33
d1gph11	231	Glutamine PRPP amidotransferase, C-terminal domain	99.31
d1dqna_	230	Guanine PRTase {Giardia lamblia [TaxId: 5741]}	99.2
d1dkua1	159	Phosphoribosylpyrophosphate synthetase {Bacillus s	99.15
d2c4ka1	160	PRPP synthetase-associated protein 1 {Human (Homo	98.95
d1u9ya1	155	Phosphoribosylpyrophosphate synthetase {Methanocal	98.82
d1i5ea_	208	Uracil PRTase, Upp {Bacillus caldolyticus [TaxId:	98.59
d1o5oa_	210	Uracil PRTase, Upp {Thermotoga maritima [TaxId: 23	98.5
d1bd3a_	224	Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811	98.46
d1v9sa1	208	Uracil PRTase, Upp {Thermus thermophilus [TaxId: 2	98.41
d1xtta1	215	Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId	98.23
d2c4ka1	160	PRPP synthetase-associated protein 1 {Human (Homo	94.05
d1u9ya1	155	Phosphoribosylpyrophosphate synthetase {Methanocal	93.77
d1dkua1	159	Phosphoribosylpyrophosphate synthetase {Bacillus s	93.7
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	89.44
d1dcfa_	134	Receiver domain of the ethylene receptor {Thale cr	84.86

>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-33  Score=218.71  Aligned_cols=162  Identities=40%  Similarity=0.738  Sum_probs=147.8

Q ss_pred             eeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhh---cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297           45 FFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP  121 (211)
Q Consensus        45 ~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~---~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~  121 (211)
                      +.+|+||.+||.|+|+..++.+|+.++.+++.++++++.   .++|.|++++.+|+++|..+|..|++|++++||+.+.+
T Consensus        12 ~~~pd~P~~Gi~f~Di~~il~~P~~~~~~~~~la~~~~~~~~~~~D~Iv~~e~~Gi~la~~lA~~l~~p~v~~Rk~~~~~   91 (178)
T d1zn7a1          12 RSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLP   91 (178)
T ss_dssp             EEEETSSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTGGGGTHHHHHHHHTCEEEEEEETTCCC
T ss_pred             cccCCCCCCCCeEEECchhhhCHHHHHHHHHHHHhhhhhhcCCCcceEEEeccccchhhhhhHHHcCCCceEeeecCCCC
Confidence            568999999999999999999999999999999998865   37899999999999999999999999999999988888


Q ss_pred             CceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCe
Q 028297          122 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPL  199 (211)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l  199 (211)
                      .......+..+++...+++..+.+.+|++||||||+++||+|+.+++++++++||+++++++++++.+  |+++|+++|+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~i~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~~~ii~~~~~~g~~~l~~~pv  171 (178)
T d1zn7a1          92 GPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPF  171 (178)
T ss_dssp             SSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHTTSCE
T ss_pred             ccceeEEeeccccccceeeccCcccCCCeEEEehhhhhhchHHHHHHHHHHHCCCEEEEEEEEEEcCcCCHHHhcCCCCe
Confidence            77766666666666677777778889999999999999999999999999999999999999999886  8899999999


Q ss_pred             EEEEccc
Q 028297          200 YILVEPR  206 (211)
Q Consensus       200 ~sl~~~~  206 (211)
                      +||++++
T Consensus       172 ~SL~~~d  178 (178)
T d1zn7a1         172 FSLLQYE  178 (178)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEeC
Confidence            9999875

>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.5e-32  Score=214.97  Aligned_cols=160  Identities=36%  Similarity=0.712  Sum_probs=142.5

Q ss_pred             eeeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhh----cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCC
Q 028297           43 SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPN  118 (211)
Q Consensus        43 ~~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~----~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~  118 (211)
                      ..+.+++||.+||.|+|+..++.+|..++.+++.+++++.+    .++|+|++++.+|+++|..+|..||+|++++||.+
T Consensus        13 ~i~~~~dfP~~Gi~f~Di~~ll~dP~~~~~li~~l~~~l~~~~~~~~vD~Ivg~e~~Gi~la~~vA~~L~~p~v~~RK~~   92 (178)
T d1g2qa_          13 ALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVGFVPVRKAG   92 (178)
T ss_dssp             HCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTCEEEEEEETT
T ss_pred             hccCCCCCCCCCceEecChhhhcCHHHHHHHHHHHHHHHHhhhccCCCcEEEEeccccchhhHHHHHHhCCceeeeeecc
Confidence            45689999999999999999999999999888888777754    37899999999999999999999999999999988


Q ss_pred             CCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCC
Q 028297          119 KLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDG  196 (211)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~  196 (211)
                      +.+.......+..+++.+.+.+..+.+.+|++||||||+++||+|+.+++++|+++||++++++|++++.+  |+++| +
T Consensus        93 k~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvgv~viid~~~~~g~~~l-~  171 (178)
T d1g2qa_          93 KLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKL-N  171 (178)
T ss_dssp             CSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCSSCCCCC-S
T ss_pred             cccccceEEEeeccccceeeeeccccccCCCEEEEEehHhhhChHHHHHHHHHHHcCCEEEEEEEEEEcCCCCchHHc-C
Confidence            87776665555556666677777788889999999999999999999999999999999999999999986  78888 6


Q ss_pred             CCeEEEE
Q 028297          197 KPLYILV  203 (211)
Q Consensus       197 ~~l~sl~  203 (211)
                      +|++||+
T Consensus       172 ~pv~SLi  178 (178)
T d1g2qa_         172 APVFTLL  178 (178)
T ss_dssp             SCEEECC
T ss_pred             CCeEEeC
Confidence            8999975

>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId: 5741]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Giardia lamblia [TaxId: 5741]

Probab=99.97  E-value=1.7e-31  Score=211.65  Aligned_cols=164  Identities=30%  Similarity=0.525  Sum_probs=146.8

Q ss_pred             eeeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCC
Q 028297           43 SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG  122 (211)
Q Consensus        43 ~~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~  122 (211)
                      ..+++|+||.+||.|+|+..++.+|+..+.+++.+++++++.++|.|++++.+|+++|..+|..||+|+..+||.++.++
T Consensus        10 ~i~~~~dfp~~Gi~F~Di~~il~dp~~~~~~~~~la~~~~~~~~d~Ivgie~~Gi~lA~~lA~~Lg~p~v~~rk~~~~~~   89 (181)
T d1l1qa_          10 LIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVALRKAGKLPG   89 (181)
T ss_dssp             TCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEEEETTSSCS
T ss_pred             hcCCCCCCCCCCccEEechhhhCCHHHHHHHHHHHHHHHhccCCCEEEeeccchhhhHHHHHHHhCCCceeEeecccccc
Confidence            34679999999999999999999999999999999999988899999999999999999999999999999999888887


Q ss_pred             ceeeeeeeeecCce-eEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeE--EEEEEEEeCch--hhcccC--
Q 028297          123 EVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEV--VECACVVGLPE--GQRRLD--  195 (211)
Q Consensus       123 ~~~~~~~~~~~~~~-~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~--V~v~~~~~~~~--~~~~l~--  195 (211)
                      ......+..++++. .+++..+.+.+|++||||||+++||+|+.+++++|+++||+.  ++++++++..+  |+++|+  
T Consensus        90 ~~~~~~~~~~~~~~~~lel~~~~l~~g~rVlIVDDvi~TGgT~~aa~~ll~~~Ga~v~~v~v~vlie~~~~~Gr~~l~~~  169 (181)
T d1l1qa_          90 DVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQK  169 (181)
T ss_dssp             SEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGCHHHHHTTT
T ss_pred             cccccccccCCCCCceeeeeeeeecCCCeeEEehhhhhhcHHHHHHHHHHHHCCCceEEEEEEEEEEcCcCChHHHhhcC
Confidence            77666666666544 567766777799999999999999999999999999999955  88999999875  888887  


Q ss_pred             CCCeEEEEccc
Q 028297          196 GKPLYILVEPR  206 (211)
Q Consensus       196 ~~~l~sl~~~~  206 (211)
                      +++++||+.++
T Consensus       170 g~~v~Sl~k~~  180 (181)
T d1l1qa_         170 CTRLFSVIREH  180 (181)
T ss_dssp             CCCEEEEEECC
T ss_pred             CCcEEEEEeec
Confidence            79999999875

>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Adenine PRTase
species: Leishmania donovani [TaxId: 5661]

Probab=99.96  E-value=1.7e-28  Score=201.20  Aligned_cols=166  Identities=31%  Similarity=0.530  Sum_probs=143.2

Q ss_pred             eecCC-CCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCC
Q 028297           46 FFQIW-WAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG  122 (211)
Q Consensus        46 ~~~~~-~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~  122 (211)
                      ..+.| |.+++.|+|++.++.+|+.++.+++.+++.++..  ++|+|++++.+|+++|..+|.+||+|++++||.++.++
T Consensus        29 ~~p~~~p~~~~~F~Di~~ll~~P~~~~~l~~~l~~~~~~~~~~~D~Ivgies~Gi~la~~lA~~Lg~p~v~vRK~~K~~g  108 (236)
T d1qb7a_          29 YSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPFVLMRKADKNAG  108 (236)
T ss_dssp             ECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHTCCEEEEBCGGGCCS
T ss_pred             cCCCCCCCCCCEEEeChhHhcCHHHHHHHHHHHHHHHHhcCCCCCEEEeccccchhHHhhhhhhhhcceeeeeeccccCC
Confidence            34666 7888999999999999999999999999999865  68999999999999999999999999999999988776


Q ss_pred             cee-eeeeeeecCc---eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC-
Q 028297          123 EVI-SEAYVLEYGT---DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD-  195 (211)
Q Consensus       123 ~~~-~~~~~~~~~~---~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~-  195 (211)
                      ... .+++..++++   +.+++..+.+.+|++||||||+++||+|+.+++++++++||++++++++++...  |+++|+ 
T Consensus       109 ~~~~~~~~~~~y~~~~~~~l~i~~~~l~~g~rVlIVDDviaTGgT~~aa~~ll~~~Ga~Vvg~~~vv~~~~~~g~~~l~~  188 (236)
T d1qb7a_         109 LLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSIPFLKAAEKIHS  188 (236)
T ss_dssp             SEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECGGGCHHHHHHH
T ss_pred             ccceeeeEEeeecccccccccchhhcccCCceEEEehhhhhccHHHHHHHHHHHHCCCEEEEEEEEEEcCCCChHHHHHh
Confidence            543 2334444443   246666677779999999999999999999999999999999999999999876  777774 


Q ss_pred             -------CCCeEEEEcccccccC
Q 028297          196 -------GKPLYILVEPRLSVNY  211 (211)
Q Consensus       196 -------~~~l~sl~~~~~~~~~  211 (211)
                             ++|++||++++.++++
T Consensus       189 ~~~~~~~~i~i~sL~~~d~l~~~  211 (236)
T d1qb7a_         189 TANSRYKDIKFISLLSDDALTEE  211 (236)
T ss_dssp             HHHHTTTTCCEEEEEEGGGCCGG
T ss_pred             ccccccCCccEEEeechhhhHHH
Confidence                   6899999999888664

>d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pur operon repressor (PurR), C-terminal domain
species: Bacillus subtilis [TaxId: 1423]

Probab=99.94  E-value=3.3e-26  Score=183.88  Aligned_cols=158  Identities=22%  Similarity=0.344  Sum_probs=128.8

Q ss_pred             CCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC-Cceeee
Q 028297           49 IWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP-GEVISE  127 (211)
Q Consensus        49 ~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~-~~~~~~  127 (211)
                      +++.++ .|.|++.++.+|..++.+++.+++.+...++|+|++++.||+++|..+|..||+|++++||+.+.+ ......
T Consensus        21 ~~~lpg-~yid~~~ll~~P~~l~~i~~~la~~~~~~~iD~Vvgi~~~Gi~lA~~lA~~L~~p~v~~Rk~~k~~~~~~~~~   99 (202)
T d1o57a2          21 ERILPG-GYVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSI   99 (202)
T ss_dssp             GGEETT-TEECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEEBCC-----CCEEEE
T ss_pred             CccCCC-CeEECchhcCCHHHHHHHHHHHHHHhccCCCCEEEEeccCcchhhHHHHHHhhcceeeeeccCCCCCCCeEEE
Confidence            333344 288999999999999999999999999888999999999999999999999999999999877654 344443


Q ss_pred             eeeeecCc--eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccC--CCCeEEEE
Q 028297          128 AYVLEYGT--DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLD--GKPLYILV  203 (211)
Q Consensus       128 ~~~~~~~~--~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~--~~~l~sl~  203 (211)
                      ++...++.  ..+.+..+.+.+|++||||||+++||+|+.+++++++++||++++++|++++..+.+++.  ++++.+|.
T Consensus       100 ~~~~~~~~~~~~l~i~~~~l~~g~rVlIVDDvi~TG~T~~a~~~~l~~~Ga~vv~~~vlvd~~~~~~~~~~~~~~l~sl~  179 (202)
T d1o57a2         100 NYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVDERLVDEYMSLLTLS  179 (202)
T ss_dssp             EEECSSCCSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSCTTSCCSCCEEEEEEE
T ss_pred             EeecCCCCccccchhcccccccCceEEEEhHHhhhhHHHHHHHHHHHHCCCEEEEEEEEEECCCcccchhhCCCceEEEE
Confidence            33333322  245666667779999999999999999999999999999999999999999987555554  78899998


Q ss_pred             cccc
Q 028297          204 EPRL  207 (211)
Q Consensus       204 ~~~~  207 (211)
                      .++.
T Consensus       180 ~i~~  183 (202)
T d1o57a2         180 TINM  183 (202)
T ss_dssp             CCCS
T ss_pred             eEee
Confidence            8764

>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine phosphoribosyltransferase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.93  E-value=3e-25  Score=176.84  Aligned_cols=144  Identities=20%  Similarity=0.289  Sum_probs=121.1

Q ss_pred             cCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCce--eeeee-eeecC-ceeEEE
Q 028297           65 LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEV--ISEAY-VLEYG-TDRLEM  140 (211)
Q Consensus        65 ~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~--~~~~~-~~~~~-~~~~~~  140 (211)
                      .||.+.+.+++.++++++..++|.|++++.+|+++|..+|..|++|+..+||+++.+...  ...++ +...+ ...+.+
T Consensus        30 ~dP~ll~~i~~~la~~~~~~~~d~Ivg~~~~Gi~lA~~iA~~L~~p~v~~Rk~~k~~~~~~~~~~~~~~~~~~~~~~~~~  109 (191)
T d1y0ba1          30 IDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAV  109 (191)
T ss_dssp             ECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEEEBSSCCSSCCSSEEEEEEEETTTTEEEEEEE
T ss_pred             cCHHHHHHHHHHHHHHhccCCCCEEEecCcccHHHHHHHHhhccceEEEEEeecCcCCCCceeEEEEEeeeccceeeeee
Confidence            489999999999999998888999999999999999999999999999999887765432  11111 11111 224555


Q ss_pred             ecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEccccc
Q 028297          141 HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRLS  208 (211)
Q Consensus       141 ~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~~~  208 (211)
                      ..+.+.+|++||||||+++||+|+.+++++++++|++++++++++++.+  ++++|.  |+|++||++++++
T Consensus       110 ~~~~l~~g~rVlIVDDvi~TG~T~~~~~~ll~~~Ga~vv~v~vlid~~~~~gr~~l~~~g~~v~SL~~i~~~  181 (191)
T d1y0ba1         110 SGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSL  181 (191)
T ss_dssp             EGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTSTHHHHHHHTTCCEEEEEEEEEC
T ss_pred             ehhhhcCCceEEEhHHhhhhChHHHHHHHHHHHCCCEEEEEEEEEEcCCcCHHHHHHHCCCCEEEEEEEeee
Confidence            5566679999999999999999999999999999999999999999975  788886  8999999999876

>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Orotate PRTase
species: Streptococcus pyogenes [TaxId: 1314]

Probab=99.92  E-value=5.4e-25  Score=177.42  Aligned_cols=144  Identities=23%  Similarity=0.327  Sum_probs=124.6

Q ss_pred             CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeee
Q 028297           53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYV  130 (211)
Q Consensus        53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~  130 (211)
                      .+-.|.|.+.++.+|+..+.+++.+++.+.+.  ++|+|++++.+|+++|..+|..+++|+.++||+.+.++...     
T Consensus        32 ~S~~Y~d~~~~~~~p~~~~~i~~~~~~~i~~~~~~~d~I~G~a~~Gip~a~~ia~~~~~p~~~vRK~~K~~G~~~-----  106 (208)
T d2aeea1          32 KSPIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAGN-----  106 (208)
T ss_dssp             EESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC----CC-----
T ss_pred             CChhheeChhhhcCHHHHHHHHHHHHHHHhhcccccccccccchhhhHHHHHHHHhhccceEEeeeccccccccc-----
Confidence            33469999999999999999999999998754  67999999999999999999999999999998876554321     


Q ss_pred             eecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEccc
Q 028297          131 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPR  206 (211)
Q Consensus       131 ~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~  206 (211)
                            .++   +.+.+|++||||||++|||+|+.++++.|+++|+++++++|++++..  +.++++  |+|++||++++
T Consensus       107 ------~ie---G~~~~G~~VlvVeDviTTG~S~~~ai~~l~~~g~~V~~~~vivdr~~~~~~~~l~~~gi~~~sL~~~~  177 (208)
T d2aeea1         107 ------QIE---GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYT  177 (208)
T ss_dssp             ------SEE---SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHH
T ss_pred             ------eee---ccccCCCEEEEehhhhhhcccHHHHHHHHHHcCCEEEEEEEEEEcccchHHHHHHHcCCCEEEEecHH
Confidence                  222   55678999999999999999999999999999999999999999974  677776  89999999999


Q ss_pred             cccc
Q 028297          207 LSVN  210 (211)
Q Consensus       207 ~~~~  210 (211)
                      |+++
T Consensus       178 dll~  181 (208)
T d2aeea1         178 ELIA  181 (208)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9876

>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TTHA1613
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=1.1e-24  Score=171.03  Aligned_cols=145  Identities=18%  Similarity=0.159  Sum_probs=112.3

Q ss_pred             eeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCc
Q 028297           44 FFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGE  123 (211)
Q Consensus        44 ~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~  123 (211)
                      .+.+|.++..+..|.+...++.+|++.+.+++.+++.+. .++|+|++++.||+++|..+|..|++|+.++||+++....
T Consensus        11 ~r~lp~~~~~~~~~i~~~~~l~dp~~~~~~~~~la~~~~-~~~D~Ivgi~~~Gi~~A~~lA~~L~~p~~~~rk~~k~~~~   89 (174)
T d1vcha1          11 TRHVPLIEPLPGRRIPLVEFLGDPEFTRAAAEALRPLVP-KEAEILFTTETSPIPLTHVLAEALGLPYVVARRRRRPYME   89 (174)
T ss_dssp             EEEECEEEEETTEEEECCCCTTCHHHHHHHHHHHGGGSC-TTCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSCCTTCC
T ss_pred             eeeCCCcccCCcceEEchhhhCCHHHHHHHHHHHHHHcC-CCCCEEEecCCCcchHhHHHHHHcCCCEEEEEEeccCCCC
Confidence            456777766666788999999999999999999988764 4789999999999999999999999999999988765432


Q ss_pred             e--eeeeeeeecCcee-EEEec--CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          124 V--ISEAYVLEYGTDR-LEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       124 ~--~~~~~~~~~~~~~-~~~~~--~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                      .  ....++..++... .....  ....+|++||||||+++||+|+.+++++|+++||++++++++++++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~rVlIVDDvi~TG~Tl~a~~~~l~~~Ga~vv~v~vl~~~G~  160 (174)
T d1vcha1          90 DPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGT  160 (174)
T ss_dssp             SCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSC
T ss_pred             CCeEEEEEEEEeccceeEEEeeccccccCCCEEEEEeceecccHHHHHHHHHHHHCCCEEEEEEEEEeCCC
Confidence            1  1111122222222 22211  12348999999999999999999999999999999999999999875

>d1lh0a_ c.61.1.1 (A:) Orotate PRTase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Orotate PRTase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.84  E-value=5.1e-21  Score=154.40  Aligned_cols=143  Identities=15%  Similarity=0.255  Sum_probs=111.8

Q ss_pred             CCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHh------CCCeEEeecCCCCCCc
Q 028297           52 AAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGE  123 (211)
Q Consensus        52 ~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L------~~p~~~~~k~~~~~~~  123 (211)
                      +.+-.|.|.+.+...| ....+++.++..+.+.  ++|+|++|+.||+++|..+|..+      +.|+...||..+.++.
T Consensus        29 ~~S~~Y~d~r~~~~~~-~~~~i~~~~~~~~~~~~~~~d~i~G~a~gGipla~~va~~l~~~~~~~~p~~~~Rke~k~~G~  107 (213)
T d1lh0a_          29 RKSPYFFNAGLFNTGR-DLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGE  107 (213)
T ss_dssp             CEEEEEECGGGCCBHH-HHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTT
T ss_pred             CcCCEeEeCcccCCcH-HHHHHHHHHHHhhhhcccccceeccccccchHHHHHHHHHHHHhcCCCCceEEeecccccccc
Confidence            3344688887665444 4567888888877654  78999999999999999999987      4577888877665443


Q ss_pred             eeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhccc-------C
Q 028297          124 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRL-------D  195 (211)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l-------~  195 (211)
                      .           +.++   +.. ++.+||||||++|||+|+.++++.|+++|+++++++|++++.+ +...+       +
T Consensus       108 ~-----------~~ie---G~~-~~~~VliVeDViTTGgS~~eaie~l~~~G~~V~~v~vivDR~e~~~~~~~~~~~~~~  172 (213)
T d1lh0a_         108 G-----------GSLV---GSA-LQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVER  172 (213)
T ss_dssp             C-----------SSEE---ESC-CCSEEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHH
T ss_pred             c-----------cccc---cCc-CCCcEEEEccchhhcccHHHHHHHHHHhcccceeEEEEEeecccccchhHHHHHHHH
Confidence            2           1232   343 3448999999999999999999999999999999999999976 33332       2


Q ss_pred             --CCCeEEEEccccccc
Q 028297          196 --GKPLYILVEPRLSVN  210 (211)
Q Consensus       196 --~~~l~sl~~~~~~~~  210 (211)
                        |+|++||++++|+++
T Consensus       173 ~~gi~~~sl~~~~dl~~  189 (213)
T d1lh0a_         173 DYGCKVISIITLKDLIA  189 (213)
T ss_dssp             HHCCEEEEEEEHHHHHH
T ss_pred             HcCCeEEEEccHHHHHH
Confidence              899999999999875

>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=99.81  E-value=6.3e-21  Score=142.50  Aligned_cols=107  Identities=22%  Similarity=0.339  Sum_probs=84.4

Q ss_pred             EEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHH
Q 028297           88 VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAA  167 (211)
Q Consensus        88 ~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a  167 (211)
                      +||+|+.||..+|..+|+.|+.|+.+++|+|..+++..           ... ..++ .+||+|+||||+++||+|+.++
T Consensus         3 ViVsPD~G~~~~a~~~a~~l~~~~a~~~K~R~~~~~~~-----------~~~-~~gd-v~gk~viIvDDii~TGgTl~~a   69 (129)
T d1u9ya2           3 IVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPTEIQ-----------IAP-KTLD-AKDRDVFIVDDIISTGGTMATA   69 (129)
T ss_dssp             EEEESSGGGHHHHHHHHHHHTCCEEEBC---------------------CCB-SSCC-CTTCCEEEEEEECSSSHHHHHH
T ss_pred             EEEEECccHHHHHHHHHHHcCCCEEEEEeeecccccce-----------eec-cccc-ccceEEEEEcchhcccccHHHH
Confidence            79999999999999999999999999888775433211           111 1244 4999999999999999999999


Q ss_pred             HHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEEcccc
Q 028297          168 VRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  207 (211)
Q Consensus       168 ~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~~~~~  207 (211)
                      ++.|+++||+.|+++++|+.++  +.++|++.++..+++-+-
T Consensus        70 a~~Lk~~GA~~V~~~~tHgifs~~a~~~l~~~~i~~iv~Tnt  111 (129)
T d1u9ya2          70 VKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEVVGTDT  111 (129)
T ss_dssp             HHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEEEEETT
T ss_pred             HHHHHhcCCcceEEEEeccccChHHHHHHHhCCCCEEEEcCC
Confidence            9999999999999999999987  788888767877776543

>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.81  E-value=4.7e-20  Score=140.84  Aligned_cols=107  Identities=24%  Similarity=0.357  Sum_probs=88.2

Q ss_pred             EEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHH
Q 028297           88 VVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAA  167 (211)
Q Consensus        88 ~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a  167 (211)
                      +||+|+.||..+|+.+|+.|+.|+..+.|++..++...           .+.+ .+++ +||+|+|||||++||+|+.++
T Consensus         3 vvVsPD~G~~kra~~~a~~l~~~~a~~~K~r~~~~~~~-----------~~~~-~GdV-~gk~viIvDDmi~TGgTl~~a   69 (149)
T d1dkua2           3 VIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNVAE-----------VMNI-VGNI-EGKTAILIDDIIDTAGTITLA   69 (149)
T ss_dssp             EEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEE-ESCC-TTCEEEEECSEESSCHHHHHH
T ss_pred             EEEEeCccHHHHHHHHHHHcCCCEEEEEeccCCCCeeE-----------EEee-eeee-CCCEEEEEhhhhhchHhHHHH
Confidence            78999999999999999999999999888775443321           1222 3665 999999999999999999999


Q ss_pred             HHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEEcccc
Q 028297          168 VRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPRL  207 (211)
Q Consensus       168 ~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~~~~~  207 (211)
                      ++.|++.||+.|+++++|+.++  +.++|++.++..+++-+-
T Consensus        70 a~~L~~~GA~~V~~~~THglfs~~a~~~l~~~~i~~ivvTnT  111 (149)
T d1dkua2          70 ANALVENGAKEVYACCTHPVLSGPAVERINNSTIKELVVTNS  111 (149)
T ss_dssp             HHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEEEEEETT
T ss_pred             HHHHHHhCCceEEEEEeecccCchHHHHHhccCCceEEEeCC
Confidence            9999999999999999999998  888899889999886543

>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pprobable purine phosphoribosyltransferase PH0095
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.80  E-value=2.7e-19  Score=137.10  Aligned_cols=120  Identities=15%  Similarity=0.250  Sum_probs=91.6

Q ss_pred             hcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhC-CCeEEeecCCCCCCceeeeeeeeecCceeEEEec
Q 028297           64 LLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHV  142 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (211)
                      +.+++..+..++.+|.++.+.++|+||||++||+.+|..+|+.|+ .|+..++.........       ......+....
T Consensus         5 ~~s~~~i~~~i~~la~~i~~~~~d~IVgI~~gG~~~A~~la~~L~~~~~~~~~~~~y~~~~~-------~~~~~~~~~~~   77 (153)
T d1vdma1           5 YLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDE-------RGEKPVITIPI   77 (153)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--C-------CCSSCEEEECC
T ss_pred             EcCHHHHHHHHHHHHHHHHccCCCEEEEECCCcchhHHHHHHHhCCCceEEEEEeecccccc-------cCCcceeeccc
Confidence            345667778888999999888999999999999999999999997 5666554322111000       00111222222


Q ss_pred             CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297          143 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG  190 (211)
Q Consensus       143 ~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~  190 (211)
                      ....+||+||||||+++||+||.++++.|++.|++.|+++|++++++.
T Consensus        78 ~~~~~gk~VLIVDDii~TG~Tl~~~~~~l~~~g~~~v~~avl~~k~~~  125 (153)
T d1vdma1          78 HGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWT  125 (153)
T ss_dssp             CSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTTC
T ss_pred             ccccCCCEEEEEeeeeccCCcHHHHHHHHHhcCCceEEEEEEEECCCC
Confidence            334589999999999999999999999999999999999999999864

>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: PRPP synthetase-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.7e-18  Score=136.61  Aligned_cols=118  Identities=14%  Similarity=0.188  Sum_probs=84.8

Q ss_pred             cEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeee-e--------eeee----------cCceeEEEecCCcCC
Q 028297           87 SVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISE-A--------YVLE----------YGTDRLEMHVGAIEP  147 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~-~--------~~~~----------~~~~~~~~~~~~~~~  147 (211)
                      .+||+|+.||.++|..+|+.|++|+..+.|++......... .        ....          .....+.+ .|+ ++
T Consensus         5 ~VVvsPd~Ggv~ra~~~A~~L~~~~a~i~k~r~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v-iGd-Vk   82 (184)
T d2c4ka2           5 AVIVAKSPDAAKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKNATVHPGLELPLMMAKEKPPITV-VGD-VG   82 (184)
T ss_dssp             CEEEESSGGGHHHHHHHHHHHTCEEEEEC---------------------------------------CCCCE-ESC-CT
T ss_pred             CEEEEECcchHHHHHHHHHHhCCCEEEEEeeeccccccccccccCCccccccccccccccccccccceeeeEE-EEe-cc
Confidence            58999999999999999999999998877655321110000 0        0000          00001111 244 49


Q ss_pred             CCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEEccc
Q 028297          148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVEPR  206 (211)
Q Consensus       148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~~~~  206 (211)
                      ||+|+||||+++||+|+.++++.|++.||++|+++++|+.++  +.++|.+.++..++.-+
T Consensus        83 Gk~vIIVDD~I~TG~T~~~a~~~Lk~~GA~~v~~~~tH~~~~~~a~~~l~~~~i~~i~~tn  143 (184)
T d2c4ka2          83 GRIAIIVDDIIDDVESFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSVDEVVVTN  143 (184)
T ss_dssp             TEEEEEECSEESSTHHHHHHHHHHHTTTEEEEEEEEEEECCCTTHHHHHHHSSCCEEEEEB
T ss_pred             CCEEEEecchhcchHHHHHHHHHHHhcccccceEEEEeeccCchHHHHhhcCCccEEEEec
Confidence            999999999999999999999999999999999999999987  88888877888877544

>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Putative phosphoribosyltransferase TT1426 (TTHA1462)
species: Thermus thermophilus [TaxId: 274]

Probab=99.66  E-value=5.2e-16  Score=124.08  Aligned_cols=123  Identities=24%  Similarity=0.313  Sum_probs=83.3

Q ss_pred             HHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEee--cCCCCCCceeeeeeeeecCc-------------
Q 028297           73 TVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLR--KPNKLPGEVISEAYVLEYGT-------------  135 (211)
Q Consensus        73 ~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~--k~~~~~~~~~~~~~~~~~~~-------------  135 (211)
                      +++.||+.+.+.  +.++|+++|.||+++|..+|+.|++|+..+.  +.+...+.........+.+.             
T Consensus         9 Ag~~LA~~l~~~~~~~~vVl~ip~ggv~~A~~iA~~L~~p~d~~~~~~i~~p~~~e~~~gavs~~~~~~~~~~~~~~~~~   88 (208)
T d1wd5a_           9 AGALLAEALAPLGLEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQ   88 (208)
T ss_dssp             HHHHHHHHHGGGCCCSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSCH
T ss_pred             HHHHHHHHHHHcCCCCCEEEeCCCCcHHHHHHHHHHcCCCceeEEEeeccCCCchhhhhceeecCCCeEechHHHhhcCc
Confidence            456677777654  4579999999999999999999999986532  21111110000000000000             


Q ss_pred             ----------------e--eE-EEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297          136 ----------------D--RL-EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       136 ----------------~--~~-~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~  195 (211)
                                      .  .. ........+||+||||||+++||+||.+|++.|+++||+.|.+++.+..+.+.+++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gk~ViLVDD~I~TG~T~~aa~~~L~~~ga~~V~~a~~v~~~~~~~~l~  167 (208)
T d1wd5a_          89 SYLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLK  167 (208)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHhhcceeeccCCCcccCCCEEEEEcchhhhhHHHHHHHHHHHhcCCCEEEEeeccCChHHHHhhc
Confidence                            0  00 000112359999999999999999999999999999999999999888777666665

>d1hgxa_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Tritrichomonas foetus [TaxId: 5724]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine-xanthine PRTase
species: Tritrichomonas foetus [TaxId: 5724]

Probab=99.59  E-value=6e-15  Score=114.74  Aligned_cols=121  Identities=12%  Similarity=0.204  Sum_probs=85.6

Q ss_pred             HhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCcee
Q 028297           63 LLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTDR  137 (211)
Q Consensus        63 l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~  137 (211)
                      ++.+++..+...+.+|.++.+.   +..+++|+.+||+.+|..|++.++.|...  +..... .+...       .+...
T Consensus         7 il~s~~~I~~~i~rlA~~I~~~~~~~~~vivgIl~GG~~fa~~L~~~l~~~~~~~~~~~~~y-~~~~~-------~~~~~   78 (173)
T d1hgxa_           7 VLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSSY-SGTKS-------TGNLT   78 (173)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC-----------------CE
T ss_pred             EecCHHHHHHHHHHHHHHHHHHcCCCCcEEEEEecCcHHHHHHHHHhcCCCceeEEEEEEec-CCccc-------cccee
Confidence            3446666666666777666543   44689999999999999999999988643  221111 01000       01112


Q ss_pred             EEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297          138 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ  191 (211)
Q Consensus       138 ~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~  191 (211)
                      +........+||+|||||||++||.|+..+.+.|++.|++.+.++|+++++..+
T Consensus        79 i~~~~~~~~~gk~VLlVDDI~dtG~Tl~~~~~~l~~~~p~~v~~avL~~K~~~~  132 (173)
T d1hgxa_          79 ISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGK  132 (173)
T ss_dssp             EEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCSS
T ss_pred             eeecccccccccceeEEeeEechhHHHHHHHHHHHhcCCCeeEEEEEEEecccc
Confidence            222223346999999999999999999999999999999999999999997543

>d1yfza1 c.61.1.1 (A:3-180) Xanthine-guanine PRTase (XPRTase) {Thermoanaerobacter tengcongensis [TaxId: 119072]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine-guanine PRTase (XPRTase)
species: Thermoanaerobacter tengcongensis [TaxId: 119072]

Probab=99.56  E-value=1.1e-14  Score=113.71  Aligned_cols=122  Identities=16%  Similarity=0.187  Sum_probs=88.0

Q ss_pred             HHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCc
Q 028297           61 TTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGT  135 (211)
Q Consensus        61 ~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~  135 (211)
                      .+++.+++..+...+.+|.++.+.   +..+++|+.+||+.+|..|++.|+.|...  +..... .....      ..+.
T Consensus         7 ~~vl~s~e~I~~~i~~LA~~I~~~~~~~~~vivgI~~GG~~fa~~L~~~l~~~~~~~~~~~~~y-~~~~~------~~~~   79 (178)
T d1yfza1           7 EEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSY-GSSTK------SSGI   79 (178)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEEC-SHHHH------HHCC
T ss_pred             heEEcCHHHHHHHHHHHHHHHHHHhCCCCcEEEEecCCceeHHHHHHhhcccceeeeEEEEEEe-cCCee------cCCc
Confidence            345567777788888888887543   34589999999999999999999987643  221111 00000      0011


Q ss_pred             eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          136 DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       136 ~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                      ..+........+||+|||||||++||.||..+.+.|++.|++.+.++|++.+..
T Consensus        80 ~~~~~~~~~~~~gk~VLlVDDVldTG~Tl~~~~~~l~~~~~~~v~~avL~~K~~  133 (178)
T d1yfza1          80 VKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE  133 (178)
T ss_dssp             EEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred             eEEecCCccCCCCCEEEEEeeeehhhHHHHHHHHHHHhhCccceEEEEEEEcCC
Confidence            112211223359999999999999999999999999999999999999999875

>d1nula_ c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Xanthine-guanine PRTase (XPRTase)
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=8.1e-15  Score=111.54  Aligned_cols=114  Identities=20%  Similarity=0.247  Sum_probs=80.7

Q ss_pred             hcCHHHHHHHHHHHHHHHhhc-CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEec
Q 028297           64 LLDHKAFKDTVDIFVDRYRDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHV  142 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~~-~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (211)
                      +-+++..+..++.+|.++.+. ++++|+|+.+||+.+|..|++.|+.|...........+...        +...+.  .
T Consensus         4 ~isw~~i~~~~~~La~~I~~~~~~~~IvgI~rGG~i~a~~L~~~l~~~~~~~~~~~~y~~~~~--------~~~~~~--~   73 (150)
T d1nula_           4 IVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQ--------RELKVL--K   73 (150)
T ss_dssp             ECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC----------------CEEE--E
T ss_pred             EecHHHHHHHHHHHHHHHHhhCCCCEEEEEccChhHHHHHHHHHhccCcceEEEEEeccCccc--------cceeee--e
Confidence            345677778888889888554 68999999999999999999999998644321111111100        011122  1


Q ss_pred             CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhc
Q 028297          143 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQR  192 (211)
Q Consensus       143 ~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~  192 (211)
                      .....||+|||||||++||.|+..+.+.|++     +.+++++.++..+.
T Consensus        74 ~~~~~gk~VLiVDDI~dtG~Tl~~~~~~l~~-----~~~atl~~k~~~~~  118 (150)
T d1nula_          74 RAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPAGRP  118 (150)
T ss_dssp             CCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGGGGG
T ss_pred             ccccCCCceEEEEecccchHHHHHHHHHhhc-----CcEEEEEEccCCCc
Confidence            2335899999999999999999999999865     35788888876443

>d1tc1a_ c.61.1.1 (A:) Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine PRTase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.50  E-value=1.4e-13  Score=107.78  Aligned_cols=119  Identities=15%  Similarity=0.193  Sum_probs=80.0

Q ss_pred             hcCHHHHHHHHHHHHHHHhhc----------CCcEEEEecCCccchHHHHHHHh---CCCeEE--eecCCCCCCceeeee
Q 028297           64 LLDHKAFKDTVDIFVDRYRDM----------GISVVAGIEARGFVFGPSIALAI---GAKFVP--LRKPNKLPGEVISEA  128 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~~----------~~d~Iv~i~~gG~~~A~~lA~~L---~~p~~~--~~k~~~~~~~~~~~~  128 (211)
                      +.+++..+...+.+|.++.+.          ++.+++|+..||+.+|..|++.|   ..|...  +...+.......   
T Consensus         8 l~s~~eI~~~i~~lA~qI~~~y~~~~~~~~~~~~viigI~~Gg~~fa~~L~~~l~~~~~~~~i~~~~~~~~~~~~~~---   84 (184)
T d1tc1a_           8 LFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTS---   84 (184)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC---------
T ss_pred             EcCHHHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEEcCCcHHHHHHHHHHhhhcCCCeeeeeEEEEeecccccc---
Confidence            345556666666666666431          34589999999999999999987   444432  221111000000   


Q ss_pred             eeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          129 YVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                          .+............+||+|||||||++||.||.++++.|++.|++.+..+|++.+..
T Consensus        85 ----~~~~~~~~~~~~~~~gk~VLlVDDIldTG~Tl~~~~~~l~~~~~~~i~~avL~~k~~  141 (184)
T d1tc1a_          85 ----SGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE  141 (184)
T ss_dssp             -------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred             ----cccccccccCcccccceeEEEEecchhHHHHHHHHHHHHhhhcCccccEEEEEEecc
Confidence                000112212233469999999999999999999999999999999999999998764

>d1j7ja_ c.61.1.1 (A:) Hypoxanthine PRTase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine PRTase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.48  E-value=2.2e-13  Score=105.64  Aligned_cols=135  Identities=13%  Similarity=0.181  Sum_probs=87.5

Q ss_pred             cCHHHHHHHHHHHHHHHhh----c-CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCcee
Q 028297           65 LDHKAFKDTVDIFVDRYRD----M-GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTDR  137 (211)
Q Consensus        65 ~~~~~~~~~~~~la~~i~~----~-~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~  137 (211)
                      .+++..+...+.+|.++.+    . +..+++|+..||+.+|..+++.|+.+...  +.-.........       .+...
T Consensus         7 is~~~I~~~I~rlA~~I~e~~~~~~~~~vivgIl~GG~~fa~~L~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~   79 (172)
T d1j7ja_           7 IPEAEIKARIAELGRQITERYKDSGSEMVLVGLLRGSFMFMADLCREVQVPHEVDFMTASSYGSGMST-------TRDVK   79 (172)
T ss_dssp             ECHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETTTTHHHHHHHHTTCCSCCEEEEEBCC----------------CCCC
T ss_pred             cCHHHHHHHHHHHHHHHHHHhcccCCceEEEEEcCCcHHHHHHHHHHhCCcccCCeEEEEecCCCccc-------cCcee
Confidence            3555666666666766643    2 45699999999999999999999987643  111110000000       00001


Q ss_pred             EEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCCCeEEEEcccc
Q 028297          138 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRL  207 (211)
Q Consensus       138 ~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~~l~sl~~~~~  207 (211)
                      +........+||+||||||+++||.||.++.+.|++.|++.+.+++++.+... .++.--|=+.-+++++
T Consensus        80 ~~~~~~~~~~gk~VLlVDDVldTG~TL~~~~~~l~~~~p~~i~~avL~~k~~~-r~~pi~pDy~G~~ipd  148 (172)
T d1j7ja_          80 ILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILGLREPKSLAICTLLDKPSR-REVDVPVEFVGFSIPD  148 (172)
T ss_dssp             CSBCCSSCCBTSEEEEEEEEESSCHHHHHHHHHHHTTCBSEEEEEEEEECGGG-CSSCCCCSEEEEECCS
T ss_pred             eecCCCcccCCCEEEEEeeehhHHHHHHHHHHHHHhhCCCceEEEEEEEeccc-ccCCCCCCEEEEEcCC
Confidence            10011223599999999999999999999999999999999999999999642 2222113344555544

>d1pzma_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Leishmania tarentolae [TaxId: 5689]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine-xanthine PRTase
species: Leishmania tarentolae [TaxId: 5689]

Probab=99.48  E-value=4.2e-13  Score=105.08  Aligned_cols=115  Identities=10%  Similarity=0.141  Sum_probs=77.7

Q ss_pred             CHHHHHHHHHHHHHHHhh---------cCCcEEEEecCCccchHHHHHHHhC---CCeEE--eecCCCCCCceeeeeeee
Q 028297           66 DHKAFKDTVDIFVDRYRD---------MGISVVAGIEARGFVFGPSIALAIG---AKFVP--LRKPNKLPGEVISEAYVL  131 (211)
Q Consensus        66 ~~~~~~~~~~~la~~i~~---------~~~d~Iv~i~~gG~~~A~~lA~~L~---~p~~~--~~k~~~~~~~~~~~~~~~  131 (211)
                      +.+......+.+|.++.+         .++.+++|+..||+.+|..|++.|.   .|...  ++-.....+..       
T Consensus        10 t~e~I~~~i~~lA~qI~~~y~~~~~~~~~piviigIl~Gg~~fa~~L~~~L~~~~~~~~i~~i~~~sy~~~~~-------   82 (183)
T d1pzma_          10 TQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGSGVE-------   82 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC--------------
T ss_pred             CHHHHHHHHHHHHHHHHHHhhhhcccCCCCeEEEEEcCCccHHHHHHHHhccccCCceeEEEEEEeecccccc-------
Confidence            445555556666666653         1356899999999999999999885   44422  22111100000       


Q ss_pred             ecCceeEEE--ecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          132 EYGTDRLEM--HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       132 ~~~~~~~~~--~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                        ..+...+  ......+||+|||||||++||.||..+.+.|++.|++.+.+++++++..
T Consensus        83 --~~~~~~~~~~~~~~~~gk~VLlVDDI~DTG~Tl~~~~~~l~~~~p~~v~~avL~~K~~  140 (183)
T d1pzma_          83 --TSGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS  140 (183)
T ss_dssp             --------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred             --cCCceeecccCcchhccccEEEEeeeecccHHHHHHHHHHHhhCCcceeEEEEEEecc
Confidence              0011111  1122358999999999999999999999999999999999999999875

>d1cjba_ c.61.1.1 (A:) Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine PRTase (HGPRTase)
species: Plasmodium falciparum [TaxId: 5833]

Probab=99.43  E-value=1.5e-13  Score=111.23  Aligned_cols=134  Identities=14%  Similarity=0.148  Sum_probs=89.0

Q ss_pred             eheeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCC-CCCce--ee-ee
Q 028297           56 MFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNK-LPGEV--IS-EA  128 (211)
Q Consensus        56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~-~~~~~--~~-~~  128 (211)
                      ...++.+++-+.+..+.-.+.||.+|.+.   +..+++|+..||+.+|..|++.|+.+.......-. ..+..  .. ..
T Consensus        35 y~~~~~~Vli~~~~I~~rI~rLA~eI~~~y~~~~~vivgIL~Gg~~Fa~dL~r~L~~~~~~~~~~~s~y~~~~~~~~~~~  114 (228)
T d1cjba_          35 YKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKS  114 (228)
T ss_dssp             TGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEEEEEEEE
T ss_pred             hhccccEEecCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHHhccccccceeeeecccCceEEEEEEe
Confidence            45566777777777777777777777533   45689999999999999999998654321100000 00000  00 00


Q ss_pred             eeeecCceeEEEe--cCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          129 YVLEYGTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       129 ~~~~~~~~~~~~~--~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                      +............  .....+||+|||||||++||.||.++.+.|++.|++.+.++|++.+..
T Consensus       115 ~~~~~~~~~~~~~~~~~~~i~gk~VLlVDDIlDTG~TL~~~~~~L~~~gp~sv~~avLldK~~  177 (228)
T d1cjba_         115 YCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRT  177 (228)
T ss_dssp             EETTEEEEEEEEEESCGGGGBTCEEEEEEEEESSSHHHHHHHHHHGGGCBSEEEEEEEEEECC
T ss_pred             ecCccccccceeecCChhhhCCceeEEecchhhHHHHHHHHHHHHHhhCcceeEEEEeeeecc
Confidence            0000011111111  122358999999999999999999999999999999999999988764

>d1z7ga1 c.61.1.1 (A:4-217) Hypoxanthine-guanine PRTase (HGPRTase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine PRTase (HGPRTase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=3.6e-13  Score=107.91  Aligned_cols=123  Identities=14%  Similarity=0.190  Sum_probs=84.9

Q ss_pred             eHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHh---------CCCeEE-eecCCCCCCcee
Q 028297           59 DITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAI---------GAKFVP-LRKPNKLPGEVI  125 (211)
Q Consensus        59 d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L---------~~p~~~-~~k~~~~~~~~~  125 (211)
                      ++.+++-+.+..+...+.||.++.+.   +..+++|+..||+.+|..|.++|         ..|+.. ..+-....+...
T Consensus        27 ~~~~ilis~~~I~~~I~rLA~qI~~~y~~k~~vlVgIl~Gg~~Fa~dL~~~L~~~~~~~~~~~~~~i~~~~~~sy~~~~~  106 (214)
T d1z7ga1          27 DLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQS  106 (214)
T ss_dssp             TEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEEEEECBC-------
T ss_pred             cccEEecCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEECCcEehHHHHHHHHHHhcccCCcccceeeeeeeeeecCCccc
Confidence            44555667777777777788777532   45699999999999999999998         455433 111110111100


Q ss_pred             eeeeeeecCceeEEEe--cCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          126 SEAYVLEYGTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       126 ~~~~~~~~~~~~~~~~--~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                              ........  .....+||+|||||||++||.||.++.+.|++.|++++.++++.++..
T Consensus       107 --------~~~~~~~~~~~~~~i~gk~VLiVDDIlDTG~TL~~~~~~l~~~gp~sv~~avLldK~~  164 (214)
T d1z7ga1         107 --------TGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT  164 (214)
T ss_dssp             -----------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred             --------ccccceeccCChHhhhhceEEEecchhhHHHHHHHHHHHHHhhCCCeEEEEEEEEccc
Confidence                    00000000  112358999999999999999999999999999999999999998764

>d1ufra_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pyrimidine operon regulator PyrR
species: Thermus thermophilus [TaxId: 274]

Probab=99.40  E-value=2.4e-12  Score=100.15  Aligned_cols=115  Identities=20%  Similarity=0.194  Sum_probs=77.2

Q ss_pred             CHHHHHHHHHHHHHHHh----hcCCcEEEEecCCccchHHHHHHHhC------CCeEEeecC--CCCCCceeeeeeeeec
Q 028297           66 DHKAFKDTVDIFVDRYR----DMGISVVAGIEARGFVFGPSIALAIG------AKFVPLRKP--NKLPGEVISEAYVLEY  133 (211)
Q Consensus        66 ~~~~~~~~~~~la~~i~----~~~~d~Iv~i~~gG~~~A~~lA~~L~------~p~~~~~k~--~~~~~~~~~~~~~~~~  133 (211)
                      +.+..+...+.+|.++.    +.++.+++|+..||+.+|..|++.+.      +++..+.-.  +...+.         .
T Consensus         9 s~~eI~~~I~rlA~qI~e~~~~~~~~vligI~~gg~~fa~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~   79 (178)
T d1ufra_           9 NAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDLTE---------I   79 (178)
T ss_dssp             EHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC-----------------
T ss_pred             CHHHHHHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHHHhhhhhcCCCcceEEEEeEEecccccc---------C
Confidence            34444555556665554    33567899999999999999999863      344333211  100000         0


Q ss_pred             CceeE--EEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEEEEEEEEeCch
Q 028297          134 GTDRL--EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLPE  189 (211)
Q Consensus       134 ~~~~~--~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V~v~~~~~~~~  189 (211)
                      +....  ........+||+|||||||++||.||..+.+.|.+.| ++.+.++++.++..
T Consensus        80 ~~~~~~~~~~~~~~i~gk~VLiVDDIlDTG~TL~~~~~~l~~~g~~~~i~~avL~dk~~  138 (178)
T d1ufra_          80 GYRPQVRETRIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRGH  138 (178)
T ss_dssp             ---CEEEEEEECSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCC
T ss_pred             CcceEEecccCccccCCCeEEEEEcccCcchHHHHHHHHHhhhCCCcEEEEEEEEcCCc
Confidence            11111  1112234699999999999999999999999999998 88999999999853

>d1fsga_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Hypoxanthine-guanine-xanthine PRTase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.39  E-value=5e-13  Score=108.38  Aligned_cols=127  Identities=19%  Similarity=0.123  Sum_probs=86.8

Q ss_pred             CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCC-----------CeEE---ee
Q 028297           53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGA-----------KFVP---LR  115 (211)
Q Consensus        53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~-----------p~~~---~~  115 (211)
                      ++-...++.+++-+.+..+.-.+.||.+|.+.   +..+++|+..||+.+|..|++.|..           +...   .+
T Consensus        38 p~~~~~~i~~Ili~~~~I~~rI~rLA~eI~e~~~~k~~vlIgIl~Gg~~fa~~L~~~L~~~~~~~~~~~~i~~~~~~~~~  117 (233)
T d1fsga_          38 PPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPPFFEHYVR  117 (233)
T ss_dssp             CTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCSCEEEEEE
T ss_pred             ccccccchhEEecCHHHHHHHHHHHHHHHHHHcCCCCeEEEEEecCCHHHHHHHHHHHHHhhcccccccccCcceeEEEE
Confidence            33334455566667777777777777777532   4468999999999999999998842           1110   11


Q ss_pred             cCCCCCCceeeeeeeeecCceeEEEec--CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297          116 KPNKLPGEVISEAYVLEYGTDRLEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE  189 (211)
Q Consensus       116 k~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~  189 (211)
                      ...          +.............  ....+||+|||||||++||.||.++.+.|++.|++.+.++|+.++..
T Consensus       118 ~s~----------~~~~~~~~~~~~~~~~~~~i~gk~VLlVDDIlDTG~TL~~~~~~L~~~gp~sv~~avLldK~~  183 (233)
T d1fsga_         118 LKS----------YQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRT  183 (233)
T ss_dssp             EEE----------EETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred             eec----------cCCccccccccccccChhhhcCceEEEeechhhHHHHHHHHHHHHHhhCcccccEEEEEEcCc
Confidence            000          00000011111111  22358999999999999999999999999999999999999999764

>d1a3ca_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pyrimidine operon regulator PyrR
species: Bacillus subtilis [TaxId: 1423]

Probab=99.37  E-value=1.9e-12  Score=100.79  Aligned_cols=121  Identities=17%  Similarity=0.260  Sum_probs=78.9

Q ss_pred             hcCHHHHHHHHHHHHHHHhh----cCCcEEEEecCCccchHHHHHHHhC----CCeE--EeecCCCCCCceeeeeeeeec
Q 028297           64 LLDHKAFKDTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIG----AKFV--PLRKPNKLPGEVISEAYVLEY  133 (211)
Q Consensus        64 ~~~~~~~~~~~~~la~~i~~----~~~d~Iv~i~~gG~~~A~~lA~~L~----~p~~--~~~k~~~~~~~~~~~~~~~~~  133 (211)
                      +.+.+..+...+.+|.++.+    .+..+++|+..||+.+|..|++.|.    .|+.  .+.-.... ...    +....
T Consensus         5 l~~~~~I~~~i~rlA~qI~e~~~~~~~~vligvl~Gg~~f~~~L~~~L~~~~~~~~~~~~i~~~~~~-~~~----~~~~~   79 (178)
T d1a3ca_           5 ILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYR-DDL----SKKTS   79 (178)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC-------------
T ss_pred             EeCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEecCccchHHHHHHHhhhhhcccceeeEeeeeeeee-ccc----ccccc
Confidence            34556666777777777753    2457889999999999999999984    4432  22111100 000    00000


Q ss_pred             CceeEEE--ecCCcCCCCEEEEEeccccchHHHHHHHHHHHhC-CCeEEEEEEEEeCch
Q 028297          134 GTDRLEM--HVGAIEPGERALVIDDLVATGGTLSAAVRLLERM-GAEVVECACVVGLPE  189 (211)
Q Consensus       134 ~~~~~~~--~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~-Ga~~V~v~~~~~~~~  189 (211)
                      ....+..  ......+||+|||||||++||.||.++.+.|++. +++.+.++++.++..
T Consensus        80 ~~~~~~~~~~~~~~l~gk~VLIVDDIlDTG~TL~~~~~~l~~~~~p~~v~~avL~dk~~  138 (178)
T d1a3ca_          80 NDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGH  138 (178)
T ss_dssp             CCCCEEEEEECSSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCC
T ss_pred             CCccEEecccCcccccCCEEEEEeeeeccCcHHHHHHHHHHhcCCCcEEEEEEEEcCCC
Confidence            0111111  1233469999999999999999999999999875 589999999999863

>d1w30a_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Pyrimidine operon regulator PyrR
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.36  E-value=2.2e-12  Score=100.85  Aligned_cols=116  Identities=17%  Similarity=0.175  Sum_probs=77.1

Q ss_pred             CHHHHHHHHHHHHHHHhh-----------cCCcEEEEecCCccchHHHHHHHh----CCCeEE--eecCCCCCCceeeee
Q 028297           66 DHKAFKDTVDIFVDRYRD-----------MGISVVAGIEARGFVFGPSIALAI----GAKFVP--LRKPNKLPGEVISEA  128 (211)
Q Consensus        66 ~~~~~~~~~~~la~~i~~-----------~~~d~Iv~i~~gG~~~A~~lA~~L----~~p~~~--~~k~~~~~~~~~~~~  128 (211)
                      +++-.....+.+|.+|.+           .+..+++|+..||+.+|..|++.|    +.++..  +.-........    
T Consensus         7 s~~~I~~~I~rlA~qI~E~~~~~~~~~~~~~~~vliGIl~Gg~~fa~~L~~~L~~~~~~~~~~~~i~~~~y~~~~~----   82 (182)
T d1w30a_           7 SAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDLM----   82 (182)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC-------
T ss_pred             CHHHHHHHHHHHHHHHHHhcccccccccCCCcEEEEEeccchHHHHHHHHHHHHhhccceeeEEEEeeeeeccccc----
Confidence            445556666777777732           123589999999999999999988    554432  21111000000    


Q ss_pred             eeeecCceeEEE--ecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEEEEEEEEeCc
Q 028297          129 YVLEYGTDRLEM--HVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP  188 (211)
Q Consensus       129 ~~~~~~~~~~~~--~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V~v~~~~~~~  188 (211)
                         ..+......  ......+||+|||||||++||.||.++.+.|.+.| ++.+.+++++++.
T Consensus        83 ---~~~~~~~~~~~~~~~~l~gk~VLlVDDIlDTG~TL~~~~~~l~~~g~~~~v~~avLvdk~  142 (182)
T d1w30a_          83 ---IKPPRPLASTSIPAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG  142 (182)
T ss_dssp             --------CCCCCBCCTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred             ---cccccccccccccccccCCcEEEEEecccccCchHHHHHHHHHhcCCCCEEEEEEEEcCC
Confidence               000000000  01223589999999999999999999999999998 7889999999985

>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Glutamine PRPP amidotransferase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.33  E-value=2.5e-12  Score=104.35  Aligned_cols=114  Identities=17%  Similarity=0.191  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHh----hcCCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceee--eeeeeecCceeEEEec
Q 028297           71 KDTVDIFVDRYR----DMGISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVIS--EAYVLEYGTDRLEMHV  142 (211)
Q Consensus        71 ~~~~~~la~~i~----~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~--~~~~~~~~~~~~~~~~  142 (211)
                      ..++..||+.+.    ..+.|+|+++|..|...|..+|+.||+|+..  ++++. .......  +..+....+..+....
T Consensus        27 ~~lG~~La~~~~~~~~~~~~dvV~~vP~s~~~~a~g~a~~l~~p~~~~~ikn~~-~~RtfI~p~~~~R~~~v~~K~~~~~  105 (243)
T d1ecfa1          27 VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRY-VGRTFIMPGQQLRRKSVRRKLNANR  105 (243)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSC-CCCCCCCSSSCCCCCCSTTTEEECG
T ss_pred             HHHHHHHHHHHHHhcCCCCccEEecccccchhhhHHHHHHcCChhhhhhhhccc-chhhhhCCcHHHHHHHHhhccccch
Confidence            355666665543    3367999999999999999999999999854  33332 1111111  1111111223454443


Q ss_pred             CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEe
Q 028297          143 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  186 (211)
Q Consensus       143 ~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~  186 (211)
                      . ..+||+|+||||-+-.|+|+...+++|+++||+.|++.....
T Consensus       106 ~-~i~gk~vvlVDDSIVRGtT~k~iv~~L~~~gakeih~~i~sP  148 (243)
T d1ecfa1         106 A-EFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAP  148 (243)
T ss_dssp             G-GTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSC
T ss_pred             h-eeccceEEEEhhHHHhhhhHHHHHHHHHHcCCCeEEEEeccc
Confidence            3 459999999999999999999999999999999999887653

>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Glutamine PRPP amidotransferase, C-terminal domain
species: Bacillus subtilis [TaxId: 1423]

Probab=99.31  E-value=2.5e-12  Score=103.48  Aligned_cols=116  Identities=20%  Similarity=0.196  Sum_probs=81.9

Q ss_pred             HHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCceeeeee--eeecCceeEEEecCCc
Q 028297           69 AFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEVISEAY--VLEYGTDRLEMHVGAI  145 (211)
Q Consensus        69 ~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  145 (211)
                      ....+++.||+... .+.|+|+++|.+|...|..+|+.+|+|+.. +.|.+.........+.  +...-+..+.... ..
T Consensus        24 ~R~~lG~~La~~~~-~~~diV~~vPds~~~~a~g~a~~~~ip~~~~~ikn~~~~RtFI~p~~~~R~~~v~~K~~~~~-~~  101 (231)
T d1gph11          24 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVR-GV  101 (231)
T ss_dssp             HHHHHHHHHHHHCC-CCCSEEECCTTTTHHHHHHHHHHHTCCBCCCEEECTTCSTTCCCCCHHHHHHTCCCSEEECH-HH
T ss_pred             HHHHHHHHHhhhCC-CCCcEEEecCCcchhHHHHHHHHhCCchhhcceehhhhhhccCCCchHHHHHHHHHhhhhhh-he
Confidence            33477888876642 368999999999999999999999999855 3232222111111111  1111122343333 33


Q ss_pred             CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEe
Q 028297          146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG  186 (211)
Q Consensus       146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~  186 (211)
                      .+||+|+||||-+-.|+|+...+++|+++||++|++...+.
T Consensus       102 i~gK~vvlVDDSIVRGtT~k~iv~~lr~aGakeVh~~i~sP  142 (231)
T d1gph11         102 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSP  142 (231)
T ss_dssp             HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESSC
T ss_pred             eccCceEEeehhhhccchHHHHHHHHHHcCCCeEEEEeccc
Confidence            59999999999999999999999999999999999887653

>d1dqna_ c.61.1.1 (A:) Guanine PRTase {Giardia lamblia [TaxId: 5741]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Guanine PRTase
species: Giardia lamblia [TaxId: 5741]

Probab=99.20  E-value=2.1e-12  Score=104.06  Aligned_cols=112  Identities=10%  Similarity=0.120  Sum_probs=77.9

Q ss_pred             HhcCHHHHHHHHHHHHHHHhh-----cCCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCc
Q 028297           63 LLLDHKAFKDTVDIFVDRYRD-----MGISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGT  135 (211)
Q Consensus        63 l~~~~~~~~~~~~~la~~i~~-----~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~  135 (211)
                      ++-+++..+...+.+|++|.+     .++.+++|+..||+.+|..|++.|+.|+..  ++-..          |......
T Consensus        34 il~t~eeI~~~i~~lA~~I~e~Yk~~~~~~viI~VLkGg~~FaadL~r~L~~~~~idfi~vsS----------Y~g~~~~  103 (230)
T d1dqna_          34 LLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSS----------YKGTRQE  103 (230)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEE----------EECSSCE
T ss_pred             EEecHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEccCcHHHHHHHHHhcCCCceEEEEEEEE----------cCCCccc
Confidence            344556666666666666653     245689999999999999999999998744  32111          1111111


Q ss_pred             eeEEEec--CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEE
Q 028297          136 DRLEMHV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACV  184 (211)
Q Consensus       136 ~~~~~~~--~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~  184 (211)
                      +...+..  ....+||+|||||||++||.||..+.+.|++.|++.+.++++
T Consensus       104 ~~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL~~l~~~L~~~~~~Sv~i~~l  154 (230)
T d1dqna_         104 SVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKHAKICSCFVKDV  154 (230)
T ss_dssp             EEECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTTCEEEEEEESCH
T ss_pred             CccceecccccccCCCceEEEehhhhhhHHHHHHHHHHhhcCCceEEEEEe
Confidence            1121111  122479999999999999999999999999999998877665

>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.15  E-value=3.6e-12  Score=97.40  Aligned_cols=70  Identities=17%  Similarity=0.151  Sum_probs=57.2

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+|||||||+++|     +|+++||++.               +.||++|++|+....++++++.+.+++++   
T Consensus        43 ~~~vrg~dv~ivqs~~~~-----~nd~lmelll~~~a~k~~~A~~i~~ViPY~~YsRQDr~~~~ge~isak~vA~lL---  114 (159)
T d1dkua1          43 EESIRGCDCYIIQSTSDP-----VNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKARSREPITAKLFANLL---  114 (159)
T ss_dssp             CSCCTTCEEEEECCCCSS-----HHHHHHHHHHHHHHHHHTTCSEEEEEESSCTTTTCCSCSSTTCCCHHHHHHHHH---
T ss_pred             ecCCCCCceEEEecCCCC-----cHHHHHHHHHHHHHHHHcCCcceEEeecccchhhhccccCCCCceeHHHHhhhH---
Confidence            489999999999999865     8999999843               79999999999999999999866555443   


Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecC
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEA   94 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~   94 (211)
                                    ...+.|-|++++.
T Consensus       115 --------------~~~G~d~vitvDl  127 (159)
T d1dkua1         115 --------------ETAGATRVIALDL  127 (159)
T ss_dssp             --------------HHHTCCEEEEESC
T ss_pred             --------------hhcCCceeEEecC
Confidence                          3336778888774

>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: PRPP synthetase-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=6.8e-11  Score=90.24  Aligned_cols=70  Identities=14%  Similarity=0.180  Sum_probs=52.3

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH   67 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~   67 (211)
                      .|+|||+|||||||++.|     +|+++||++.               ++||++|++|+... .+.+++           
T Consensus        46 ~e~vrg~~V~ivqs~~~~-----~n~~lmeLll~~da~k~~~a~~It~ViPY~~YaRQDk~~-~~g~i~-----------  108 (160)
T d2c4ka1          46 KESVRGQDIFIIQTIPRD-----VNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMR-KRGSIV-----------  108 (160)
T ss_dssp             CSCCTTCCEEEECCCCSC-----HHHHHHHHHHHHHHHHHTTCSCEEEEESSCTTTTTTSCC-SSSCCH-----------
T ss_pred             CccccCCceEEEeccCcc-----hHHHHHHHHHHHHHHHHhCcccceeecccchhhhccccc-cCCCch-----------
Confidence            489999999999999855     8999999843               79999999999764 444443           


Q ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEecCC
Q 028297           68 KAFKDTVDIFVDRYRDMGISVVAGIEAR   95 (211)
Q Consensus        68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~g   95 (211)
                            +..++..+...+.|-|++++.-
T Consensus       109 ------a~~va~~l~~~g~d~vitvDlH  130 (160)
T d2c4ka1         109 ------CKLLASMLAKAGLTHIITMDLH  130 (160)
T ss_dssp             ------HHHHHHHHHHTCCCEEEEESCS
T ss_pred             ------HHHHHhHHhhcCcceEEEeccC
Confidence                  2233344444578999998853

>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=98.82  E-value=1.3e-10  Score=88.22  Aligned_cols=56  Identities=5%  Similarity=-0.041  Sum_probs=46.3

Q ss_pred             cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHh
Q 028297            3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLL   64 (211)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~   64 (211)
                      .|+|||+||||+||+. |     +|+++||++.               ++||++|++|++...++++++.+.+++++
T Consensus        42 ~~~vrg~~vvvi~s~~-~-----~~d~lmelll~~da~~~~~a~~I~~ViPY~~YaRQDr~~~~ge~iSak~va~ll  112 (155)
T d1u9ya1          42 VDEINDDEAVIINTQK-N-----QNDAIVETILLCDALRDEGVKKITLVAPYLAYARQDKKFNPGEAISIRALAKIY  112 (155)
T ss_dssp             CSCCCSSEEEEECCCS-S-----HHHHHHHHHHHHHHHHTTTCCEEEEECSSCTTCSCSSCSSTTBCCHHHHHHHHH
T ss_pred             ccccCCceeEEEeccc-c-----cchHHHHHHHHHHHHHHhCCcceEEecccchhhccccccCCCCcccHHHHHHHH
Confidence            4899999999999975 4     6999999733               79999999999999999999865444433

>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Bacillus caldolyticus [TaxId: 1394]

Probab=98.59  E-value=4.7e-07  Score=71.30  Aligned_cols=97  Identities=22%  Similarity=0.298  Sum_probs=70.1

Q ss_pred             EEEEecCCccchHHHHHHHhC-CCeEEee-cCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHH
Q 028297           88 VVAGIEARGFVFGPSIALAIG-AKFVPLR-KPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLS  165 (211)
Q Consensus        88 ~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~  165 (211)
                      ++|++-+.|..+...+.+.+. .+...+- .+.....+           ...++...+...+++.|+|+|.++.||+|+.
T Consensus        72 ~~V~ILRAGl~m~~g~~~~~p~a~vg~Ig~~Rd~~t~~-----------p~~~y~klP~~i~~~~villDPmlATG~s~~  140 (208)
T d1i5ea_          72 GVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDPQTLK-----------PVEYYVKLPSDVEERDFIIVDPMLATGGSAV  140 (208)
T ss_dssp             EEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCTTCSS-----------CEEEEEECCTTTTTSEEEEECSEESSSHHHH
T ss_pred             eEeecccchhhHHHHHHHhCCCceeeeEEEeeccCCCC-----------cEEEeeecCcchhcCeEEEeChhHhcchhHH
Confidence            577888999999988888863 3332221 11111111           0012223344468999999999999999999


Q ss_pred             HHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297          166 AAVRLLERMGAEVVECACVVGLPEGQRRLD  195 (211)
Q Consensus       166 ~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~  195 (211)
                      .|++.|++.|++.+.++++...++|.+++.
T Consensus       141 ~ai~~L~~~G~~~I~~v~~iaa~~Gi~~i~  170 (208)
T d1i5ea_         141 AAIDALKKRGAKSIKFMCLIAAPEGVKAVE  170 (208)
T ss_dssp             HHHHHHHHTTCCCEEEECSEECHHHHHHHH
T ss_pred             HHHHHHHhCCCCcEEEEEEeecHHHHHHHH
Confidence            999999999999999999999888777764

>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermotoga maritima [TaxId: 2336]

Probab=98.50  E-value=1e-06  Score=69.35  Aligned_cols=103  Identities=19%  Similarity=0.325  Sum_probs=72.7

Q ss_pred             cEEEEecCCccchHHHHHHHhC-CCeEE--eecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHH
Q 028297           87 SVVAGIEARGFVFGPSIALAIG-AKFVP--LRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGT  163 (211)
Q Consensus        87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~T  163 (211)
                      -++|++-++|..+...+.+.+. +++..  +.+..+.....            ..+...+....++.|+|+|.++.||+|
T Consensus        73 i~~V~ILRAGl~m~~g~~~~~p~a~vg~i~~~r~~~t~~p~------------~yy~~lP~~i~~~~vil~DPmlATG~s  140 (210)
T d1o5oa_          73 IVVVPILRAGLVMADGILELLPNASVGHIGIYRDPETLQAV------------EYYAKLPPLNDDKEVFLLDPMLATGVS  140 (210)
T ss_dssp             EEEEEEETTHHHHHHHHHHHSTTCEECEEEEEECTTTCCEE------------EEEEECCCCCTTCEEEEECSEESSSHH
T ss_pred             eEEEEEeccchhHHHHHHHhCCCceeeEEEEeccCCCCCce------------eehhhCCccccCceEEEEhHHhhcCcc
Confidence            4788888999999988888873 34322  22111100000            111222334578999999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEEEEeCchhhcccC----CCCeEE
Q 028297          164 LSAAVRLLERMGAEVVECACVVGLPEGQRRLD----GKPLYI  201 (211)
Q Consensus       164 l~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~----~~~l~s  201 (211)
                      +.+|++.|++.|++.+.++++...++|.+++.    ++++..
T Consensus       141 ~~~ai~~L~~~g~~~I~~v~~ias~~Gl~~i~~~~P~v~I~t  182 (210)
T d1o5oa_         141 SIKAIEILKENGAKKITLVALIAAPEGVEAVEKKYEDVKIYV  182 (210)
T ss_dssp             HHHHHHHHHHTTCCEEEEECSEECHHHHHHHHHHCTTCEEEE
T ss_pred             HHHHHHHHHhCCCCcEEEEEEEEchHHHHHHHHHCCCCEEEE
Confidence            99999999999999999999998888777763    555443

>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.46  E-value=6.6e-07  Score=71.18  Aligned_cols=111  Identities=14%  Similarity=0.193  Sum_probs=74.8

Q ss_pred             EEEEecCCccchHHHHHHHhC-CCeEEeecCCCCCCceeeeeeeeecCcee-EEEecCCcCCCCEEEEEeccccchHHHH
Q 028297           88 VVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDR-LEMHVGAIEPGERALVIDDLVATGGTLS  165 (211)
Q Consensus        88 ~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gk~VLIVDDiitTG~Tl~  165 (211)
                      ++|++-+.|..+...+-+.+. +....+--.|... . .         +.. .....+...++++|+|+|.++.||+|+.
T Consensus        86 ~~V~ILRAGl~m~~g~~~~~p~a~~g~i~~~Rde~-t-~---------~p~~~y~klP~~i~~~~vil~DPmLATG~S~~  154 (224)
T d1bd3a_          86 CGVSIVRAGESMESGLRAVCRGVRIGKILIQRDET-T-A---------EPKLIYEKLPADIRERWVMLLDPMCATAGSVC  154 (224)
T ss_dssp             EEEEEETGGGGGHHHHHHHSTTCCEEEEEEEECTT-T-C---------CEEEEEEECCTTGGGSEEEEECSEESSCHHHH
T ss_pred             EEEeeecccchhhhhHHhhCCCccceeeeeccccC-C-C---------CceeeHhhCCCccccceEEEeChHHhcchHHH
Confidence            578888999999998888763 4443322111100 0 0         001 1222233348899999999999999999


Q ss_pred             HHHHHHHhCCCe--EEEEEEEEeCchhhcccC----CCCeEEEEccccccc
Q 028297          166 AAVRLLERMGAE--VVECACVVGLPEGQRRLD----GKPLYILVEPRLSVN  210 (211)
Q Consensus       166 ~a~~~L~~~Ga~--~V~v~~~~~~~~~~~~l~----~~~l~sl~~~~~~~~  210 (211)
                      .|++.|++.|++  .+.+++++..++|.+++.    ++++.. ..+++.+|
T Consensus       155 ~ai~~L~~~g~~~~~I~~v~~iaa~~Gi~~l~~~~P~v~i~t-a~ID~~Ln  204 (224)
T d1bd3a_         155 KAIEVLLRLGVKEERIIFVNILAAPQGIERVFKEYPKVRMVT-AAVDICLN  204 (224)
T ss_dssp             HHHHHHHHTTCCGGGEEEEEEEECHHHHHHHHHHCTTCEEEE-EEECSEEC
T ss_pred             HHHHHHHHcCCCcceEEEEEEEecHHHHHHHHHHCcCCEEEE-EEECcccC
Confidence            999999999986  577888888888777764    556555 34555444

>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Thermus thermophilus [TaxId: 274]

Probab=98.41  E-value=1.1e-06  Score=69.23  Aligned_cols=112  Identities=22%  Similarity=0.305  Sum_probs=73.3

Q ss_pred             EEEEecCCccchHHHHHHHhC-CCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHH
Q 028297           88 VVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSA  166 (211)
Q Consensus        88 ~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~  166 (211)
                      ++|++-+.|..+...+-+.+. .+...+--.+..  ++.        .........+....+++|+|+|.++.||+|+..
T Consensus        72 ~~V~ILRAGl~m~~g~~~~~p~a~ig~i~~~r~~--~t~--------~p~~~y~klP~~i~~~~vil~DPmlATG~s~~~  141 (208)
T d1v9sa1          72 ALVAILRAGLVMVEGILKLVPHARVGHIGLYRDP--ESL--------NPVQYYIKLPPDIAERRAFLLDPMLATGGSASL  141 (208)
T ss_dssp             EEEEETTTHHHHHHHHHTTCTTCEEEEEEEC-------------------CEEEECCSCGGGSCEEEECSEESSSHHHHH
T ss_pred             EEeeeeccchhHHHHHHHHCCCcceeeEEEEecC--CCC--------CcEEEEEecCcccccceEEEeCchhhcchhHHH
Confidence            677888899877777666553 333222111110  000        000122222333478999999999999999999


Q ss_pred             HHHHHHhCCCeEEEEEEEEeCchhhcccC----CCCeEEEEccccccc
Q 028297          167 AVRLLERMGAEVVECACVVGLPEGQRRLD----GKPLYILVEPRLSVN  210 (211)
Q Consensus       167 a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~----~~~l~sl~~~~~~~~  210 (211)
                      |++.|++.|++.+.++++...++|.+++.    ++.+.. ..+++.+|
T Consensus       142 ai~~L~~~gv~~I~~v~~ias~~Gi~~v~~~~P~v~I~t-a~iD~~Ln  188 (208)
T d1v9sa1         142 ALSLLKERGATGVKLMAILAAPEGLERIAKDHPDTEVVV-AAIDERLN  188 (208)
T ss_dssp             HHHHHHHTTCCSCEEEEEEECHHHHHHHHHHCTTCEEEE-EEECSEEC
T ss_pred             HHHHHHhcCCCceEEEEEEecHHHHHHHHHHCCCCEEEE-EEecCCcC
Confidence            99999999999999999998888777764    556555 24555544

>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=98.23  E-value=2.2e-06  Score=67.72  Aligned_cols=109  Identities=10%  Similarity=0.118  Sum_probs=70.7

Q ss_pred             EEEEecCCccchHHHHHHHhC-CCeEEeecCC-CCCCceeeeeeeeecCceeEEE-ecCC-cCCCCEEEEEeccccchHH
Q 028297           88 VVAGIEARGFVFGPSIALAIG-AKFVPLRKPN-KLPGEVISEAYVLEYGTDRLEM-HVGA-IEPGERALVIDDLVATGGT  163 (211)
Q Consensus        88 ~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~gk~VLIVDDiitTG~T  163 (211)
                      ++|++-++|..+...+.+.+. .+...+-..+ ...+....++     .+..++. ..+. ..+.++|+|+|.++.||+|
T Consensus        73 ~~V~ILRAGl~m~~g~~~~~p~a~vg~ig~~r~~~~~~~~~~~-----~~~~~yy~klP~~~~~~~~VillDPmlATG~s  147 (215)
T d1xtta1          73 VIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVPKD-----MDVYIYYKKIPDIRAKVDNVIIADPMIATAST  147 (215)
T ss_dssp             EEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSCCSC-----CCEEEEEEECCCCCTTTCEEEEECSEESSSHH
T ss_pred             EEeechhhcccchHHHHhhCCCCceeeeeeEeccccccCCCcc-----cceeeeeecCCCcccccceEEEeCchHhcchh
Confidence            788888999888888887763 3333321111 1111000000     0011221 2222 2244689999999999999


Q ss_pred             HHHHHHHHHhCCCeEEEEEEEEeCchhhcccC----CCCeEE
Q 028297          164 LSAAVRLLERMGAEVVECACVVGLPEGQRRLD----GKPLYI  201 (211)
Q Consensus       164 l~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~----~~~l~s  201 (211)
                      +.++++.|++.|++.+.++++...++|.+++.    ++.++.
T Consensus       148 ~~~ai~~L~~~g~~~I~~~~~ias~~Gi~~l~~~~P~v~i~t  189 (215)
T d1xtta1         148 MLKVLEEVVKANPKRIYIVSIISSEYGVNKILSKYPFIYLFT  189 (215)
T ss_dssp             HHHHHHHHGGGCCSEEEEECSEEEHHHHHHHHHHCTTSEEEE
T ss_pred             HHHHHHHHhccCCCEEEEEEEEecHHHHHHHHHHCcCCEEEE
Confidence            99999999999999999999998888777763    555554

>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: PRPP synthetase-associated protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.05  E-value=0.11  Score=38.00  Aligned_cols=73  Identities=16%  Similarity=0.145  Sum_probs=48.5

Q ss_pred             chHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchH----HHHHHHHHHHh
Q 028297           98 VFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG----TLSAAVRLLER  173 (211)
Q Consensus        98 ~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~----Tl~~a~~~L~~  173 (211)
                      .+|..+|+.||+++..+..++-..++.            .++  .....+|+.|+||-.....-.    -+.-+++.+++
T Consensus        15 ~LA~~ia~~Lg~~l~~~~~~~F~DGE~------------~v~--i~e~vrg~~V~ivqs~~~~~n~~lmeLll~~da~k~   80 (160)
T d2c4ka1          15 ELAKRITERLGAELGKSVVYQETNGET------------RVE--IKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKT   80 (160)
T ss_dssp             HHHHHHHHHTTCCCCCEEEEECTTSCE------------EEE--ECSCCTTCCEEEECCCCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCccceEEEECCCCCe------------eec--cCccccCCceEEEeccCcchHHHHHHHHHHHHHHHH
Confidence            599999999999986654333223322            223  234459999999987765532    13335788899


Q ss_pred             CCCeEEEEEEE
Q 028297          174 MGAEVVECACV  184 (211)
Q Consensus       174 ~Ga~~V~v~~~  184 (211)
                      +||+.|.++.-
T Consensus        81 ~~a~~It~ViP   91 (160)
T d2c4ka1          81 ACARNIIGVIP   91 (160)
T ss_dssp             TTCSCEEEEES
T ss_pred             hCcccceeecc
Confidence            99998876544

>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Methanocaldococcus jannaschii [TaxId: 2190]

Probab=93.77  E-value=0.34  Score=35.03  Aligned_cols=76  Identities=9%  Similarity=0.086  Sum_probs=50.7

Q ss_pred             CccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHH---HHHHHHH
Q 028297           95 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL---SAAVRLL  171 (211)
Q Consensus        95 gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl---~~a~~~L  171 (211)
                      +.-.+|..+|+.||.++..+..++-..++              +.+..+...+|++|+|+=.....-..+   .-.++++
T Consensus         8 ~~~~La~~ia~~lg~~l~~~~~~~F~DGE--------------~~v~i~~~vrg~~vvvi~s~~~~~d~lmelll~~da~   73 (155)
T d1u9ya1           8 QSQNLAFKVAKLLNTKLTRVEYKRFPDNE--------------IYVRIVDEINDDEAVIINTQKNQNDAIVETILLCDAL   73 (155)
T ss_dssp             TCHHHHHHHHHHTTCCEECEEEEECTTCC--------------EEEEECSCCCSSEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCceeeEEEEcCCCC--------------cceeeccccCCceeEEEecccccchHHHHHHHHHHHH
Confidence            44579999999999998775544333333              222233445999999997654444444   3466788


Q ss_pred             HhCCCeEEEEEEE
Q 028297          172 ERMGAEVVECACV  184 (211)
Q Consensus       172 ~~~Ga~~V~v~~~  184 (211)
                      +++||+.|.++.-
T Consensus        74 ~~~~a~~I~~ViP   86 (155)
T d1u9ya1          74 RDEGVKKITLVAP   86 (155)
T ss_dssp             HTTTCCEEEEECS
T ss_pred             HHhCCcceEEecc
Confidence            9999998766543

>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosylpyrophosphate synthetase-like
domain: Phosphoribosylpyrophosphate synthetase
species: Bacillus subtilis [TaxId: 1423]

Probab=93.70  E-value=0.37  Score=34.94  Aligned_cols=76  Identities=16%  Similarity=0.150  Sum_probs=49.6

Q ss_pred             CccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccch-HH---HHHHHHH
Q 028297           95 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATG-GT---LSAAVRL  170 (211)
Q Consensus        95 gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG-~T---l~~a~~~  170 (211)
                      +.-.+|..+|+.||+++.....++-..++              +.+......+|++|+||-.....= ..   +.-+++.
T Consensus         9 s~~~La~~ia~~Lg~~l~~~~~~~FpDGE--------------~~v~i~~~vrg~dv~ivqs~~~~~nd~lmelll~~~a   74 (159)
T d1dkua1           9 SNPELAKEIADIVGVQLGKCSVTRFSDGE--------------VQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDA   74 (159)
T ss_dssp             SCHHHHHHHHHHHTCCCCCEEEEECTTSC--------------EEEEECSCCTTCEEEEECCCCSSHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCCccceEEEEcCCCC--------------EEEEeecCCCCCceEEEecCCCCcHHHHHHHHHHHHH
Confidence            33569999999999988665443333333              222233445999999997765431 11   2245788


Q ss_pred             HHhCCCeEEEEEEE
Q 028297          171 LERMGAEVVECACV  184 (211)
Q Consensus       171 L~~~Ga~~V~v~~~  184 (211)
                      +++.||+.|.++.-
T Consensus        75 ~k~~~A~~i~~ViP   88 (159)
T d1dkua1          75 LKRASAKTINIVIP   88 (159)
T ss_dssp             HHHTTCSEEEEEES
T ss_pred             HHHcCCcceEEeec
Confidence            89999998876554

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=89.44  E-value=0.33  Score=32.93  Aligned_cols=30  Identities=30%  Similarity=0.482  Sum_probs=20.8

Q ss_pred             CCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297          148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVE  180 (211)
Q Consensus       148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~  180 (211)
                      ||+||||||=-.....+   .+.|++.|.+++.
T Consensus         1 GkrILivDD~~~~~~~l---~~~L~~~g~~v~~   30 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMML---KDIITKAGYEVAG   30 (118)
T ss_dssp             CCEEEEECSCHHHHHHH---HHHHHHTTCEEEE
T ss_pred             CCEEEEEeCCHHHHHHH---HHHHHHcCCceEE
Confidence            89999999965444444   4556778877543

>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Receiver domain of the ethylene receptor
domain: Receiver domain of the ethylene receptor
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.86  E-value=0.82  Score=31.48  Aligned_cols=30  Identities=30%  Similarity=0.361  Sum_probs=22.0

Q ss_pred             CCCCEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297          146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEV  178 (211)
Q Consensus       146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~  178 (211)
                      .+|++||||||--++...   ..+.|++.|.++
T Consensus         5 ~~g~rILvVDD~~~~~~~---l~~~L~~~G~~v   34 (134)
T d1dcfa_           5 FTGLKVLVMDENGVSRMV---TKGLLVHLGCEV   34 (134)
T ss_dssp             CTTCEEEEECSCHHHHHH---HHHHHHHTTCEE
T ss_pred             CCCCEEEEEeCCHHHHHH---HHHHHHHCCCEE
Confidence            389999999997555444   445677889864