Citrus Sinensis ID: 028325

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Protein Sequence
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPAWYSLAPDHETD
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEcccccccEEEccccccccccccccccccccEEEEccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccHHccccccccccccccccHHHHHHHHHHcccccHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mlksivagscsvplrleskdnlnagacfsdttrsasvaccssssrtnaynvpklepfsrtkleravkepslieksENDLADYcstlegddsysCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRkaktdgfaseektlgskriesssrpvpdglpkTLEELEEEerarmpdspytRLLRAKgrlpawyslapdhetd
Flexible Loop (DISEMBL)
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCssssrtnaynvpklepfsrtkleravkepslieksendLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSirkaktdgfASEEktlgskriesssrpvpdglpkTLEEleeeerarmpdspytrLLRAkgrlpawyslapdhetd
Low Complexity Region (SEG)
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRsasvaccssssRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFelkdlekelpkedieklilQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTleeleeeeRARMPDSPYTRLLRAKGRLPAWYSLAPDHETD
Disordered region (IsUnstruct)
************************GACF**************************************************LADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIR*************************************************************************
Disordered Region (DISOPRED)
*********CSVPLRLESKDNLNAGAC*****************************FSRT*****VK***LIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHG******************************************************YTRLLRAKGRLPA***********
Disordered Region (DISEMBL)
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTD**********************DGLPKTLEEL*********DSPYTRLLRAKGRLPAWYSLAPDHETD
Disordered Region (DISPRO)
*LKSIVAGSCSVPLRLESK*************************RTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAK********************RPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPAWYS********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPAWYSLAPDHETD
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
255556231	326	conserved hypothetical protein [Ricinus	0.985	0.634	0.661	2e-69
224103497	204	predicted protein [Populus trichocarpa]	0.966	0.995	0.635	3e-67
351720857	200	uncharacterized protein LOC100305614 [Gl	0.947	0.995	0.619	2e-61
225428657	194	PREDICTED: uncharacterized protein LOC10	0.838	0.907	0.653	9e-61
351728107	200	uncharacterized protein LOC100527613 [Gl	0.952	1.0	0.6	1e-59
449471271	209	PREDICTED: uncharacterized protein LOC10	0.752	0.755	0.687	2e-55
188572010	235	unknown protein [Ophiopogon japonicus]	0.857	0.765	0.590	1e-54
388501824	196	unknown [Medicago truncatula]	0.847	0.908	0.591	5e-52
357475533	196	hypothetical protein MTR_4g087160 [Medic	0.847	0.908	0.591	5e-52
449455220	215	PREDICTED: uncharacterized protein LOC10	0.752	0.734	0.650	9e-52

>gi|255556231|ref|XP_002519150.1| conserved hypothetical protein [Ricinus communis] gi|223541813|gb|EEF43361.1| conserved hypothetical protein [Ricinus communis]

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/210 (66%), Positives = 161/210 (76%), Gaps = 3/210 (1%)

Query: 1   MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRT 60
           MLKSI+  S S PL  E +   N+  C    +   S +  SSSS  ++  +PKLEPFSRT
Sbjct: 120 MLKSILLQSPSSPLLFEHR---NSKTCTRIVSTITSSSSSSSSSSRSSSYIPKLEPFSRT 176

Query: 61  KLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQS 120
           KLERAVK P LIEKSEN+LADYCSTL+GDDSYSCWRAYFELKDLE+E PKED+EKLILQ+
Sbjct: 177 KLERAVKAPPLIEKSENELADYCSTLDGDDSYSCWRAYFELKDLERESPKEDVEKLILQA 236

Query: 121 GGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERA 180
           GGVKSLIGCLHGISS+ K + +GF      L  ++ +    P+PDGLPK+ EEL+EEERA
Sbjct: 237 GGVKSLIGCLHGISSMHKGRKNGFGFMAPMLAVEKEKERPCPIPDGLPKSQEELDEEERA 296

Query: 181 RMPDSPYTRLLRAKGRLPAWYSLAPDHETD 210
           RMPDSPYTRLLR KGR PAWYS APDHETD
Sbjct: 297 RMPDSPYTRLLRTKGRFPAWYSPAPDHETD 326

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103497|ref|XP_002313079.1| predicted protein [Populus trichocarpa] gi|118483253|gb|ABK93529.1| unknown [Populus trichocarpa] gi|222849487|gb|EEE87034.1| predicted protein [Populus trichocarpa]

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 134/211 (63%), Positives = 159/211 (75%), Gaps = 8/211 (3%)

Query: 1   MLKSIVAGSCSVPLRLESKD-NLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSR 59
           M+KS++  S   PL +E++D N ++    S T        CSSS   +A N+PKL+PFSR
Sbjct: 1   MIKSLLLRSFPSPLLIEARDVNRSSKRVVSSTI------TCSSSRSDDALNIPKLDPFSR 54

Query: 60  TKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQ 119
           TK+ERAVK   LI+KSEN+LADYCSTLEGDDSYSCWRAYFELKDLE+E PKED+ +LI+Q
Sbjct: 55  TKIERAVKSLPLIQKSENELADYCSTLEGDDSYSCWRAYFELKDLERESPKEDVVRLIIQ 114

Query: 120 SGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEER 179
           SGGVKSLIGCLHGISS+ K K   F+        K  E    P+PDGLPK+L+ELEEEER
Sbjct: 115 SGGVKSLIGCLHGISSMNKGKKKAFSMAAPPNVMKERERLC-PIPDGLPKSLQELEEEER 173

Query: 180 ARMPDSPYTRLLRAKGRLPAWYSLAPDHETD 210
           ARMPDSP+TR+LR KGR PAWYS APDHETD
Sbjct: 174 ARMPDSPFTRMLRTKGRFPAWYSPAPDHETD 204

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351720857|ref|NP_001237958.1| uncharacterized protein LOC100305614 [Glycine max] gi|255626091|gb|ACU13390.1| unknown [Glycine max]

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/210 (61%), Positives = 153/210 (72%), Gaps = 11/210 (5%)

Query: 2   LKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSAS-VACCSSSSRTNAYNVPKLEPFSRT 60
           +K+ +   CS PL L++  N       S T R AS V CCSS    N   +PKLEPFSRT
Sbjct: 1   MKATLLRPCSGPLILDTHSNRT-----SSTMRHASTVVCCSSK---NQPYIPKLEPFSRT 52

Query: 61  KLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQS 120
           K ERAVK+P LIEKSE ++ DYCSTLEGD SYSCW+AYFELKDLEKE P+ DIE+LIL++
Sbjct: 53  KFERAVKDPPLIEKSEKEILDYCSTLEGDQSYSCWQAYFELKDLEKESPRADIERLILET 112

Query: 121 GGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERA 180
           GGVKSLIGCLHGIS + K K  G  +  K + S+  E    P+PDGLPK+ +EL EEE+A
Sbjct: 113 GGVKSLIGCLHGISIMHKVKK-GDMNLSKDVKSEEGERMC-PIPDGLPKSADELREEEQA 170

Query: 181 RMPDSPYTRLLRAKGRLPAWYSLAPDHETD 210
           RMPDSPYT+LLR  GR PAWYS APDHETD
Sbjct: 171 RMPDSPYTKLLRTMGRHPAWYSPAPDHETD 200

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428657|ref|XP_002284884.1| PREDICTED: uncharacterized protein LOC100267586 [Vitis vinifera] gi|297741365|emb|CBI32496.3| unnamed protein product [Vitis vinifera]

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 117/179 (65%), Positives = 138/179 (77%), Gaps = 3/179 (1%)

Query: 32  TRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDS 91
           +RS++V C   SSR +   +PKLEPFSR+KL+R +KEP LI+K EN+L DYCSTLEGDDS
Sbjct: 19  SRSSTVCC---SSRNSQPYIPKLEPFSRSKLDRVLKEPPLIQKCENELMDYCSTLEGDDS 75

Query: 92  YSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTL 151
           YSCW+AYFELKDLEKE PKED+EKLILQ GG+KSLIGCLH +++  K K  G  S +   
Sbjct: 76  YSCWQAYFELKDLEKESPKEDVEKLILQVGGLKSLIGCLHHVATFSKGKKAGIGSVKAVN 135

Query: 152 GSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPAWYSLAPDHETD 210
             K       PVPDGLPK+ EELEEE++ RMPDS +TRLLR KGR PAWYS APDHETD
Sbjct: 136 TEKEEGGRPFPVPDGLPKSQEELEEEDKGRMPDSAFTRLLRTKGRFPAWYSPAPDHETD 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351728107|ref|NP_001238719.1| uncharacterized protein LOC100527613 [Glycine max] gi|255632776|gb|ACU16741.1| unknown [Glycine max]

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/210 (60%), Positives = 152/210 (72%), Gaps = 10/210 (4%)

Query: 1   MLKSIVAGSCSVPLRLESKDNLNAGACFSDTTRSASVACCSSSSRTNAYNVPKLEPFSRT 60
           M  +++    S PL L++  N  +      T  +++V CCSS  R   Y +PKLEPFSRT
Sbjct: 1   MKATLLCPCSSAPLILDTHSNRTSA-----TRHASTVVCCSS--RNQPY-IPKLEPFSRT 52

Query: 61  KLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPKEDIEKLILQS 120
           K ERAVK+P LIEKSE ++ DYCSTLEGD SYSCW+AYFELKDLEKE PK DIE+LIL++
Sbjct: 53  KFERAVKDPPLIEKSEREILDYCSTLEGDQSYSCWQAYFELKDLEKESPKADIERLILET 112

Query: 121 GGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSRPVPDGLPKTLEELEEEERA 180
           G VKSLIGCLHGIS + K K  G  +  K + S+  E    P+PDGLPK+ +EL EEE+A
Sbjct: 113 GSVKSLIGCLHGISIMHKLKK-GDMNLSKDVKSEEGERLC-PIPDGLPKSADELREEEQA 170

Query: 181 RMPDSPYTRLLRAKGRLPAWYSLAPDHETD 210
           RMPDSPYT+LLR  GR PAWYS APDHETD
Sbjct: 171 RMPDSPYTKLLRTMGRHPAWYSPAPDHETD 200

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449471271|ref|XP_004153261.1| PREDICTED: uncharacterized protein LOC101222441 [Cucumis sativus]

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/163 (68%), Positives = 137/163 (84%), Gaps = 5/163 (3%)

Query: 51  VPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFELKDLEKELPK 110
           +PKL+PFSR+KL+RA+KEP LI+KSEN+LADYCSTLEGDDSYSCW+AYFEL+DLEKE PK
Sbjct: 49  IPKLQPFSRSKLDRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPK 108

Query: 111 EDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSR---PVPDGL 167
           +++EKLILQ+GGVKSLIGC+HGI++I+K+K  G   EE+    K +E       P+PDGL
Sbjct: 109 QEVEKLILQAGGVKSLIGCVHGITAIQKSK--GKEKEERKAWKKEVEGRGNRECPIPDGL 166

Query: 168 PKTLEELEEEERARMPDSPYTRLLRAKGRLPAWYSLAPDHETD 210
           PK+ EE+EEEE  RMPDS +TRLLR+KG  PAWYS APDHETD
Sbjct: 167 PKSAEEIEEEEEGRMPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|188572010|gb|ACD64979.1| unknown protein [Ophiopogon japonicus]

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 108/183 (59%), Positives = 137/183 (74%), Gaps = 3/183 (1%)

Query: 28  FSDTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLE 87
           F D  RS S     ++ R++A ++PKLEPFSR++++R ++EPS ++K ENDL +YCS LE
Sbjct: 22  FVDVGRSRSARFVCNAQRSSA-SIPKLEPFSRSRIDRRMQEPSFLKKCENDLTEYCSILE 80

Query: 88  GDDSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASE 147
           GD+SYSCWRAYFELKDLEKE+PK+D+EK + Q+GG KSLI CLHG++++ K   +     
Sbjct: 81  GDESYSCWRAYFELKDLEKEMPKDDVEKFVRQTGGRKSLIECLHGLTALEKKAKNKQKRA 140

Query: 148 EKTLGSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPAWYSLAPDH 207
                 +R E     VPDGLPKT E LEEEERARMPDSP+TRLLR+ GR PAWYS APDH
Sbjct: 141 AVIAEEERHEPPR--VPDGLPKTREVLEEEERARMPDSPFTRLLRSMGRHPAWYSEAPDH 198

Query: 208 ETD 210
           ETD
Sbjct: 199 ETD 201

Source: Ophiopogon japonicus

Species: Ophiopogon japonicus

Genus: Ophiopogon

Family: Asparagaceae

Order: Asparagales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388501824|gb|AFK38978.1| unknown [Medicago truncatula]

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 107/181 (59%), Positives = 137/181 (75%), Gaps = 3/181 (1%)

Query: 30  DTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGD 89
           + T S  + C SSSSR  ++ +PKL+PFSRTKL+R  K+  LIEKSE DL DYCS LEGD
Sbjct: 19  NPTSSTKLICSSSSSRNQSF-IPKLQPFSRTKLDRLAKDLPLIEKSEKDLLDYCSILEGD 77

Query: 90  DSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEK 149
           +SYSCW+AYFELKDL+KE P+ +IE+LI++ GGVKSLIGCLHGI+ +RK K +      +
Sbjct: 78  ESYSCWQAYFELKDLQKESPRAEIERLIIEIGGVKSLIGCLHGIALMRKLKKNDLNLTNE 137

Query: 150 TLGSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPAWYSLAPDHET 209
               +  E +  P PDGLPK+ +E+ EEE+A+MPDS YT+LLR+ G+ PAWYS APDHET
Sbjct: 138 IYSEE--EQNPCPRPDGLPKSADEMMEEEQAKMPDSSYTKLLRSMGKSPAWYSEAPDHET 195

Query: 210 D 210
           D
Sbjct: 196 D 196

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475533|ref|XP_003608052.1| hypothetical protein MTR_4g087160 [Medicago truncatula] gi|355509107|gb|AES90249.1| hypothetical protein MTR_4g087160 [Medicago truncatula]

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 107/181 (59%), Positives = 137/181 (75%), Gaps = 3/181 (1%)

Query: 30  DTTRSASVACCSSSSRTNAYNVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGD 89
           + T S  + C SSSSR  ++ +PKL+PFSRTKL+R  K+  LIEKSE DL DYCS LEGD
Sbjct: 19  NPTSSTKLICSSSSSRNQSF-IPKLQPFSRTKLDRLAKDLPLIEKSEKDLLDYCSILEGD 77

Query: 90  DSYSCWRAYFELKDLEKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEK 149
           +SYSCW+AYFELKDL+KE P+ +IE+LI++ GGVKSLIGCLHGI+ +RK K +      +
Sbjct: 78  ESYSCWQAYFELKDLQKESPRAEIERLIIEIGGVKSLIGCLHGIALMRKLKKNDLNLTNE 137

Query: 150 TLGSKRIESSSRPVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPAWYSLAPDHET 209
               +  E +  P PDGLPK+ +E+ EEE+A+MPDS YT+LLR+ G+ PAWYS APDHET
Sbjct: 138 IYSEE--EQNPCPRPDGLPKSADEMMEEEQAKMPDSSYTKLLRSMGKSPAWYSEAPDHET 195

Query: 210 D 210
           D
Sbjct: 196 D 196

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455220|ref|XP_004145351.1| PREDICTED: uncharacterized protein LOC101213926 [Cucumis sativus]

 Score =  208 bits (530), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 110/169 (65%), Positives = 134/169 (79%), Gaps = 11/169 (6%)

Query: 51  VPKLEPFSRTKLERAVKEPSLIEKSENDL------ADYCSTLEGDDSYSCWRAYFELKDL 104
           +PKL+PFSR+KL+RA+KEP LI+KSEN         DYCSTLEGDDSYSCW+AYFEL+DL
Sbjct: 49  IPKLQPFSRSKLDRAIKEPPLIQKSENYYYYYFCSCDYCSTLEGDDSYSCWKAYFELQDL 108

Query: 105 EKELPKEDIEKLILQSGGVKSLIGCLHGISSIRKAKTDGFASEEKTLGSKRIESSSR--- 161
           EKE PK+++EKLILQ+GGVKSLIGC+HGI++I+K+K  G   EE+    K +E       
Sbjct: 109 EKESPKQEVEKLILQAGGVKSLIGCVHGITAIQKSK--GKEKEERKAWKKEVEGRGNREC 166

Query: 162 PVPDGLPKTLEELEEEERARMPDSPYTRLLRAKGRLPAWYSLAPDHETD 210
           P+PDGLPK+ EE+EEEE  RMPDS +TRLLR+KG  PAWYS APDHETD
Sbjct: 167 PIPDGLPKSAEEIEEEEEGRMPDSAFTRLLRSKGTFPAWYSPAPDHETD 215

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
TAIR|locus:2044556	203	MEE14 "AT2G15890" [Arabidopsis	0.761	0.788	0.509	1.6e-38

TAIR|locus:2044556 MEE14 "AT2G15890" [Arabidopsis thaliana (taxid:3702)]

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 83/163 (50%), Positives = 110/163 (67%)

Query:    50 NVPKLEPFSRTKLERAVKEPSLIEKSENDLADYCSTLEGDDSYSCWRAYFXXXXXXXXXX 109
             +VPKLE FSR K +R +++P LIEK+E++L+DYCSTLEGDDSYSCWRAYF          
Sbjct:    42 DVPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKP 101

Query:   110 XXXXXXXXXQSGGVKSLIGCLHGISSIRKA-KT-DGFASEEKTLGSKRIESSSRPVPDGL 167
                      Q+GG+KSLIGCLHG++S+ K  KT +G    E++   K +      +PDGL
Sbjct:   102 KVEVENLILQTGGLKSLIGCLHGVASMEKDNKTKNGLHVGEESDREKGMNLHIH-IPDGL 160

Query:   168 PKTXXXXXXXXRARMPDSPYTRLLRAKGRLPAWYSLAPDHETD 210
             PK+        +++MPDS +TRLLR+KG +PAW+S APDHETD
Sbjct:   161 PKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.386    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      210       172   0.00093  108 3  11 23  0.46    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  578 (61 KB)
  Total size of DFA:  148 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.38u 0.18s 14.56t   Elapsed:  00:00:01
  Total cpu time:  14.38u 0.18s 14.56t   Elapsed:  00:00:01
  Start:  Fri May 10 14:14:57 2013   End:  Fri May 10 14:14:58 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00090586 SubName- Full=Putative uncharacterized protein; (204 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	210
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 2e-05
 Identities = 39/257 (15%), Positives = 72/257 (28%), Gaps = 90/257 (35%)

Query: 31  TTRSASVA-CCSSSSRTNAYNVPKLEPFSRTKLE---------RAVKEP----------- 69
           TTR   V    S+++ T+          +  +++         R    P           
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330

Query: 70  SLIEKSENDLADYCSTLEGDDSYSCW------------------RAYFE----------- 100
           S+I +S   + D  +T +     +C                   R  F+           
Sbjct: 331 SIIAES---IRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387

Query: 101 ----LKDLEKELPKEDIEKLILQSGGVKSLIGC--------LHGISSIRKAKTDGFASEE 148
               L  +  ++ K D+  +++      SL+          +  I    K K +     E
Sbjct: 388 PTILLSLIWFDVIKSDVM-VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE----NE 442

Query: 149 KTLGSKRIESSSRPV---PDGLPKT-------------LEELEEEERARMPDSPYT--RL 190
             L    ++  + P     D L                L+ +E  ER  +    +   R 
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF 502

Query: 191 LRAKGRL--PAWYSLAP 205
           L  K R    AW +   
Sbjct: 503 LEQKIRHDSTAWNASGS 519

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00