Citrus Sinensis ID: 028372

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Protein Sequence
MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVLL
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHcccccEEEcccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHHcccEEccccccccccHHHHHHcHHHHHHccccccccEEEEccccccccccHHHHHHHHccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccHHHcHHHHHccccEEEEccccccccccEEEEEHHHccccEccHHHHHHHHHHHHHccccccccccEEEEcccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHHHHccEcccccccHHHHHHHHHcHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHHccccEEEEEEcc
Coil and Loop (DISEMBL)
MEDNNAIKRDVTEligntpmvyLNNVVDGCVARIAAKLetmepcssvkDRIAYSMIKdaedkglitpgkttlievtsgntgVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILkktpdgyllrqfenpanpkihyettgpeiwqdsggkvdAFISgigtggtvtgagrflkennpdIKVVLRVLL
Flexible Loop (DISEMBL)
mednnaikrdvteligntpmvyLNNVVDGCVARIAAKletmepcssvKDRIAYSMIKdaedkglitpGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTgagrflkennpdikvVLRVLL
Low Complexity Region (SEG)
MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFeeilekgeeilkkTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISgigtggtvtgagRFLKENNPDIKVVLRVLL
Disordered region (IsUnstruct)
*********DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV**
Disordered Region (DISOPRED)
*****AI**DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVLL
Disordered Region (DISEMBL)
********RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVLL
Disordered Region (DISPRO)
****NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVLL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVLL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	210	2.2.26 [Sep-21-2011]
F4K5T2	323	Bifunctional cystathionin	no	no	0.971	0.631	0.730	9e-77
Q43317	325	Cysteine synthase OS=Citr	N/A	no	0.952	0.615	0.725	3e-76
P32260	383	Cysteine synthase, chloro	N/A	no	0.947	0.519	0.693	2e-75
Q00834	325	Cysteine synthase OS=Spin	N/A	no	0.976	0.630	0.682	9e-75
Q9XEA6	321	Cysteine synthase OS=Oryz	no	no	0.942	0.616	0.702	1e-74
P38076	325	Cysteine synthase OS=Trit	N/A	no	0.947	0.612	0.678	2e-73
P31300	374	Cysteine synthase, chloro	N/A	no	0.947	0.532	0.673	2e-73
Q9XEA8	325	Cysteine synthase OS=Oryz	no	no	0.966	0.624	0.679	2e-73
O81154	325	Cysteine synthase OS=Sola	N/A	no	0.942	0.609	0.707	2e-73
O81155	386	Cysteine synthase, chloro	N/A	no	0.947	0.515	0.678	3e-73

>sp|F4K5T2|CGL_ARATH Bifunctional cystathionine gamma-lyase/cysteine synthase OS=Arabidopsis thaliana GN=DES1 PE=1 SV=1

 Score =  286 bits (731), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 149/204 (73%), Positives = 171/204 (83%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           MED   IK DVTELIGNTPMVYLN +VDGCVARIAAKLE MEPCSS+KDRIAYSMIKDAE
Sbjct: 1   MEDRVLIKNDVTELIGNTPMVYLNKIVDGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAE 60

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
           DKGLITPGK+TLIE T GNTG+GLA I A+RGY +I++MPST S+ERRI+LRALGAE+ L
Sbjct: 61  DKGLITPGKSTLIEATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHL 120

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
            D ++  +  LEK +EIL KTP GY+  QF NP NP+IHY TTGPEIW+DS GKVD  ++
Sbjct: 121 TDISIGIKGQLEKAKEILSKTPGGYIPHQFINPENPEIHYRTTGPEIWRDSAGKVDILVA 180

Query: 181 GIGTGGTVTGAGRFLKENNPDIKV 204
           G+GTGGTVTG G+FLKE N DIKV
Sbjct: 181 GVGTGGTVTGTGKFLKEKNKDIKV 204

Involved in maintaining Cys homeostasis through the desulfuration of L-cysteine. Probably unable to interact with SAT and to form the decameric Cys synthase complex (CSC) and is therefore not an enzymatically true OASTL protein.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 1

>sp|Q43317|CYSK_CITLA Cysteine synthase OS=Citrullus lanatus PE=1 SV=1

 Score =  284 bits (726), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 145/200 (72%), Positives = 173/200 (86%)

Query: 5   NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGL 64
           + I +DVTELIGNTP+VYLN VVDGCVAR+AAKLE MEPCSSVKDRI YSMI DAE+KGL
Sbjct: 6   STIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDAENKGL 65

Query: 65  ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124
           ITPG++ LIE TSGNTG+GLAFIAAA+GY LII MP++ S+ERR +LRA GAE++L D A
Sbjct: 66  ITPGESVLIEPTSGNTGIGLAFIAAAKGYRLIICMPASMSLERRTILRAFGAELVLTDPA 125

Query: 125 LRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGT 184
              +  ++K EEI  KTP+ Y+L+QFENPANPKIHYETTGPEIW+ SGGK+DA +SGIGT
Sbjct: 126 RGMKGAVQKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWRGSGGKIDALVSGIGT 185

Query: 185 GGTVTGAGRFLKENNPDIKV 204
           GGTVTGAG++LKE NP+IK+
Sbjct: 186 GGTVTGAGKYLKEQNPNIKL 205

Produces L-cysteine from O-acetyl-L-serine and hydrogen sulfide. Can also use pyrazole and 3,4-dihydroxypyridine instead of the hydrogen sulfide to produce two plant specific non-protein amino acids beta-pyrazolylalanine and L-mimosine.

Citrullus lanatus (taxid: 3654)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 5

EC: 2

>sp|P32260|CYSKP_SPIOL Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2

 Score =  281 bits (719), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 138/199 (69%), Positives = 168/199 (84%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I  DV++LIG TPMVYLNNV  G VA IAAKLE+MEPC SVKDRI YSMI DAE KG+IT
Sbjct: 67  IAEDVSQLIGKTPMVYLNNVSKGSVANIAAKLESMEPCCSVKDRIGYSMIDDAEQKGVIT 126

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGKTTL+E TSGNTG+GLAFIAAARGY + + MP++ SMERR++L+A GAE++L D A  
Sbjct: 127 PGKTTLVEPTSGNTGIGLAFIAAARGYKITLTMPASMSMERRVILKAFGAELVLTDPAKG 186

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
            +  +EK EEILKKTPD Y+L+QF+NPANPKIHYETTGPEIW+D+ GKVD F++GIGTGG
Sbjct: 187 MKGAVEKAEEILKKTPDSYMLQQFDNPANPKIHYETTGPEIWEDTKGKVDIFVAGIGTGG 246

Query: 187 TVTGAGRFLKENNPDIKVV 205
           T++G GR+LKE NP ++V+
Sbjct: 247 TISGVGRYLKERNPGVQVI 265

Spinacia oleracea (taxid: 3562)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q00834|CYSK_SPIOL Cysteine synthase OS=Spinacia oleracea PE=1 SV=1

 Score =  279 bits (714), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 140/205 (68%), Positives = 172/205 (83%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           +E+   I +DVTELIG TP+VYLN V DGCVAR+AAKLE MEPCSSVKDRI +SMI DAE
Sbjct: 2   VEEKAFIAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAE 61

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
             GLITPG++ LIE TSGNTG+GLAFIAAA+GY LII MP++ S+ERR +LRA GAE+IL
Sbjct: 62  KSGLITPGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELIL 121

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
            D A   +  ++K EEI  KTP+ Y+L+QFENPANPK+HYETTGPEIW+ +GGK+D F+S
Sbjct: 122 TDPAKGMKGAVQKAEEIRDKTPNSYILQQFENPANPKVHYETTGPEIWKGTGGKIDIFVS 181

Query: 181 GIGTGGTVTGAGRFLKENNPDIKVV 205
           GIGTGGT+TGAG++LKE NPD+K++
Sbjct: 182 GIGTGGTITGAGKYLKEQNPDVKLI 206

Spinacia oleracea (taxid: 3562)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q9XEA6|CYSK1_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2

 Score =  278 bits (712), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 139/198 (70%), Positives = 170/198 (85%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I +DVTELIGNTP+VYLN V DGCV R+AAKLE+MEPCSSVKDRI YSMI DAE+KGLIT
Sbjct: 5   IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIT 64

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGK+ LIE TSGNTG+GLAF+AAA+GY L++ MP++ SMERRI+L+A GAE+IL D  L 
Sbjct: 65  PGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLG 124

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
            +  ++K EE+  KT + ++L+QFENPANPKIHYETTGPEIW+ +GGKVD  +SGIGTGG
Sbjct: 125 MKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSGIGTGG 184

Query: 187 TVTGAGRFLKENNPDIKV 204
           T+TGAGR+L+E NPDIK+
Sbjct: 185 TITGAGRYLREQNPDIKI 202

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P38076|CYSK_WHEAT Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1

 Score =  275 bits (703), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 135/199 (67%), Positives = 168/199 (84%)

Query: 6   AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           AI +DVTELIGNTP+VYLN V DGCV R+AAKLE+MEPCSSVKDRI YSMI DAE+KG I
Sbjct: 8   AIAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFI 67

Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
            PGK+ LIE TSGNTG+GLAF+AAA+GY L++ MP++ SMERRI+L+A GAE+IL D  L
Sbjct: 68  VPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLL 127

Query: 126 RFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTG 185
             +  ++K EE+  KTP+ Y+L+QFEN ANPKIHYETTGPEIW+ +GGK+D  +SGIGTG
Sbjct: 128 GMKGAVQKAEELAAKTPNSYILQQFENAANPKIHYETTGPEIWKGTGGKIDGLVSGIGTG 187

Query: 186 GTVTGAGRFLKENNPDIKV 204
           GT+TG G++L+E NP+IK+
Sbjct: 188 GTITGTGKYLQEQNPNIKL 206

Triticum aestivum (taxid: 4565)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|P31300|CYSKP_CAPAN Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1

 Score =  275 bits (703), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 134/199 (67%), Positives = 167/199 (83%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I  DVT+LIGNTPMVYLN +V GCVA IAAKLE MEPC SVKDRI +SMI DAE+KGLI+
Sbjct: 67  IAEDVTQLIGNTPMVYLNTIVKGCVANIAAKLEIMEPCCSVKDRIGFSMISDAEEKGLIS 126

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGKT L+E TSGNTG+GLAFIAA+RGY LI+ MP++ S+ERR++L+A GAE++L D A  
Sbjct: 127 PGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKG 186

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
            +  + K EEIL  TPD Y+L+QF+NPANPKIHYETTGPEIW+D+ GK+D  ++GIGTGG
Sbjct: 187 MKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGG 246

Query: 187 TVTGAGRFLKENNPDIKVV 205
           T++G GR+LKE NP+IK++
Sbjct: 247 TISGTGRYLKEKNPNIKII 265

Capsicum annuum (taxid: 4072)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q9XEA8|CYSK2_ORYSJ Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1

 Score =  275 bits (703), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/203 (67%), Positives = 168/203 (82%)

Query: 2   EDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAED 61
           E   +I  DVT LIGNTP+VYLN VVDGC A+IAAKLE MEPCSSVKDRI YSMI DAE+
Sbjct: 3   ESGQSIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEE 62

Query: 62  KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121
           KGLITPGK+ LIE TSGNTG+GLAF+AAA+GY LI+ MP++ SMERRI+L+A GAE++L 
Sbjct: 63  KGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVLT 122

Query: 122 DSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISG 181
           D  L  +  ++K +E+  K P+ Y+L+QFENPANPKIHYETTGPEIW+ + GKVD  +SG
Sbjct: 123 DPLLGMKGAIQKADELAAKMPNSYILQQFENPANPKIHYETTGPEIWKATAGKVDILVSG 182

Query: 182 IGTGGTVTGAGRFLKENNPDIKV 204
           IGTGGTVTG G++LKE NP+IK+
Sbjct: 183 IGTGGTVTGTGKYLKEQNPEIKI 205

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|O81154|CYSK_SOLTU Cysteine synthase OS=Solanum tuberosum PE=2 SV=1

 Score =  275 bits (702), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 140/198 (70%), Positives = 169/198 (85%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I +DVTELIGNTP+VYLNNVVDGCVAR+AAKLE+MEPCSSVKDRI YSMI DAE+KGLI 
Sbjct: 8   IAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIK 67

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG++ LIE TSGNTGVGLAF+AAA+GY LII MPS+ S+ERRI+LR   +E++L D A  
Sbjct: 68  PGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELVLTDPAKG 127

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
            +  + K EEI  KTP+ Y+L+QFENPANPKIHYETTGPEIW+ S GKVDA  SGIGTGG
Sbjct: 128 MKGAISKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWKGSNGKVDALASGIGTGG 187

Query: 187 TVTGAGRFLKENNPDIKV 204
           T+TG+G++L+E NP++K+
Sbjct: 188 TITGSGKYLREQNPNVKL 205

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1

 Score =  274 bits (701), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 135/199 (67%), Positives = 166/199 (83%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I  DVT+LIGNTPMVYLN +  GCVA IAAKLE MEPC SVKDRI +SMI DAE+KGLI+
Sbjct: 69  IAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLIS 128

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGKT L+E TSGNTG+GLAFIAA+RGY LI+ MP++ S+ERR++L+A GAE++L D A  
Sbjct: 129 PGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKG 188

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
            +  + K EEIL  TPD Y+L+QF+NPANPKIHYETTGPEIW+D+ GK+D  ++GIGTGG
Sbjct: 189 MKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGG 248

Query: 187 TVTGAGRFLKENNPDIKVV 205
           T+TG GRFLKE NP+IK++
Sbjct: 249 TITGTGRFLKEQNPNIKII 267

Solanum tuberosum (taxid: 4113)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 4

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
359487832	342	PREDICTED: cysteine synthase [Vitis vini	0.971	0.596	0.759	3e-83
297808839	324	cysteine synthase [Arabidopsis lyrata su	0.980	0.635	0.713	7e-82
255542388	332	cysteine synthase, putative [Ricinus com	0.971	0.614	0.794	3e-81
363814498	324	uncharacterized protein LOC100775420 [Gl	0.966	0.626	0.694	5e-81
255636625	242	unknown [Glycine max]	0.971	0.842	0.696	1e-80
255542384	256	cysteine synthase, putative [Ricinus com	0.971	0.796	0.769	4e-80
351724467	324	cysteine synthase [Glycine max] gi|12650	0.966	0.626	0.689	4e-80
224130748	331	predicted protein [Populus trichocarpa]	0.971	0.616	0.753	2e-79
224130744	323	predicted protein [Populus trichocarpa]	0.971	0.631	0.754	5e-79
224144420	325	predicted protein [Populus trichocarpa]	0.966	0.624	0.733	2e-78

>gi|359487832|ref|XP_002275688.2| PREDICTED: cysteine synthase [Vitis vinifera] gi|298204914|emb|CBI34221.3| unnamed protein product [Vitis vinifera]

 Score =  313 bits (801), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 155/204 (75%), Positives = 180/204 (88%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           MED +AI +D+TELIG TPMVYLN +VDGCVARIAAKLE MEPCSSVKDRI YSMIKDAE
Sbjct: 1   MEDKSAIAKDITELIGKTPMVYLNKIVDGCVARIAAKLEMMEPCSSVKDRIGYSMIKDAE 60

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
           DKGLITPGKT LIE TSGNTG+GLAFIAA +GY L+IVMP++ S+ERRI+LRA GAE+I+
Sbjct: 61  DKGLITPGKTVLIEPTSGNTGIGLAFIAAVKGYKLVIVMPASFSLERRIILRAFGAELII 120

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
            D A  F+E L + EE+LKK P+GY+L+QFENPANP+IHYETTGPEIW+ SGGKVDA +S
Sbjct: 121 TDPAKGFKEQLRRIEELLKKIPNGYVLQQFENPANPRIHYETTGPEIWEGSGGKVDALVS 180

Query: 181 GIGTGGTVTGAGRFLKENNPDIKV 204
           GIGTGGT +GAG+FLKE NP+IKV
Sbjct: 181 GIGTGGTASGAGKFLKEKNPEIKV 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808839|ref|XP_002872303.1| cysteine synthase [Arabidopsis lyrata subsp. lyrata] gi|297318140|gb|EFH48562.1| cysteine synthase [Arabidopsis lyrata subsp. lyrata]

 Score =  308 bits (790), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 147/206 (71%), Positives = 176/206 (85%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           MED  +IK DVTELIGNTPMVYLNNVVDGCVARIAAKLE MEP SSVKDRIAYSMIKDAE
Sbjct: 1   MEDRCSIKNDVTELIGNTPMVYLNNVVDGCVARIAAKLEMMEPFSSVKDRIAYSMIKDAE 60

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
           +KGLITPGK+TLIE T+GNTG+GLA + AARGY +I+VMPST S+ERRI+L+ALGAE+ L
Sbjct: 61  EKGLITPGKSTLIEPTAGNTGIGLACVGAARGYKVILVMPSTMSLERRIILKALGAELHL 120

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
           ++  +  + +LEK + IL KTP GY+ +QFEN ANP+IHY+TTGPEIW+DS GKVD  ++
Sbjct: 121 SEQRIGLKGMLEKTDAILSKTPGGYIPQQFENAANPEIHYQTTGPEIWRDSAGKVDILVA 180

Query: 181 GIGTGGTVTGAGRFLKENNPDIKVVL 206
           G+GTGGT +G G+FLKE N DIKV +
Sbjct: 181 GVGTGGTASGVGKFLKEQNKDIKVCV 206

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542388|ref|XP_002512257.1| cysteine synthase, putative [Ricinus communis] gi|223548218|gb|EEF49709.1| cysteine synthase, putative [Ricinus communis]

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 162/204 (79%), Positives = 179/204 (87%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           ME N  IK+DVTELIGNTPMVYLNN+VDGCVARIAAKLE MEP SSVKDRIAYSMIKDAE
Sbjct: 10  MEANCEIKKDVTELIGNTPMVYLNNIVDGCVARIAAKLEMMEPVSSVKDRIAYSMIKDAE 69

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
           DKGLITPGKT LIE TSGNTG+GLA IAA +GY +I+ MP++ S+ERRIVLRALGAE+ L
Sbjct: 70  DKGLITPGKTVLIEPTSGNTGIGLAAIAAMKGYKIILTMPASMSLERRIVLRALGAEVYL 129

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
            D A  F  +LEK +EIL KTP+GY+ RQFENPANPKIHYETTGPEIW+DSGGKVDA ++
Sbjct: 130 TDPAKGFNGVLEKTDEILNKTPNGYVFRQFENPANPKIHYETTGPEIWRDSGGKVDALVA 189

Query: 181 GIGTGGTVTGAGRFLKENNPDIKV 204
           GIGTGGTVTGAGRFLKE N DIKV
Sbjct: 190 GIGTGGTVTGAGRFLKEKNSDIKV 213

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814498|ref|NP_001242884.1| uncharacterized protein LOC100775420 [Glycine max] gi|255645072|gb|ACU23035.1| unknown [Glycine max]

 Score =  306 bits (783), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 141/203 (69%), Positives = 169/203 (83%)

Query: 2   EDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAED 61
           E   AIK+D TEL+GNTPMV+LNN+V GCVARIAAKLE M+ C SVKDRIA SMI+DAE 
Sbjct: 3   EPQCAIKKDATELVGNTPMVFLNNIVVGCVARIAAKLEYMQACCSVKDRIALSMIEDAEK 62

Query: 62  KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121
           KGLITPGKT L+E TSGNTG+GLAFIAA RGY L + MPS  S+ER+I+LRA GAE+ L 
Sbjct: 63  KGLITPGKTVLVEYTSGNTGIGLAFIAALRGYKLQVTMPSYVSLERKIILRAFGAEVYLT 122

Query: 122 DSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISG 181
           D A   + +++K EE+L KTPD ++L QFENPANP IHYETTGPEIW+DSGGK+DA ++G
Sbjct: 123 DPAKGIDGVIQKAEELLAKTPDSFMLNQFENPANPNIHYETTGPEIWRDSGGKIDALVAG 182

Query: 182 IGTGGTVTGAGRFLKENNPDIKV 204
           IGTGG++ GAGRFL+E NPDIK+
Sbjct: 183 IGTGGSIAGAGRFLREKNPDIKL 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255636625|gb|ACU18650.1| unknown [Glycine max]

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 142/204 (69%), Positives = 168/204 (82%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           ME    IK+D TELIGNTPMVYLNN+VDGCVARIAAKLE M+ C SVKDRIA SMI+DAE
Sbjct: 1   MEPQCRIKKDATELIGNTPMVYLNNIVDGCVARIAAKLEYMQACCSVKDRIALSMIEDAE 60

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
            KGLITPGKT L+E TSGNTG+GLAFIAA RGY L + MPS  S+ER+I+LRA GAE+ L
Sbjct: 61  KKGLITPGKTVLVEYTSGNTGIGLAFIAALRGYKLQVTMPSYVSLERKIILRAFGAEVYL 120

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
            D A   + +++K EE++ KTPD ++L QFENPANP IHY TTGPEIW+DSG K+DA +S
Sbjct: 121 TDPAKGIDGVIQKAEELIAKTPDSFMLNQFENPANPNIHYGTTGPEIWRDSGEKIDALVS 180

Query: 181 GIGTGGTVTGAGRFLKENNPDIKV 204
           GIGTGG++ GAGRFL+E NPDIK+
Sbjct: 181 GIGTGGSIAGAGRFLREKNPDIKL 204

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542384|ref|XP_002512255.1| cysteine synthase, putative [Ricinus communis] gi|223548216|gb|EEF49707.1| cysteine synthase, putative [Ricinus communis]

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 157/204 (76%), Positives = 180/204 (88%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           MED  AIK+DVTELIGNTPMVYLNN+++GC  RIAAKLE MEPC SVKDRIAYSMIKDAE
Sbjct: 1   MEDKCAIKKDVTELIGNTPMVYLNNILEGCDVRIAAKLENMEPCYSVKDRIAYSMIKDAE 60

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
           +KGLITPGKT L+EVTSGNTG+ +A IAAA+GY +IIVMP+  S+ERRIVLRA GAE+ L
Sbjct: 61  EKGLITPGKTVLVEVTSGNTGIAMASIAAAKGYKIIIVMPAFKSLERRIVLRAFGAELHL 120

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
            D    ++EIL+K EEI+K TP+GY+L QFENPANPKIHYETTGPEIW+DSGGKVDA ++
Sbjct: 121 TDPNKGYDEILKKAEEIVKNTPNGYMLHQFENPANPKIHYETTGPEIWKDSGGKVDALVA 180

Query: 181 GIGTGGTVTGAGRFLKENNPDIKV 204
           GIGTGGTVTGAG+FLKE NPDIKV
Sbjct: 181 GIGTGGTVTGAGKFLKEKNPDIKV 204

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724467|ref|NP_001235267.1| cysteine synthase [Glycine max] gi|126508784|gb|ABO15567.1| cysteine synthase [Glycine max]

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 140/203 (68%), Positives = 168/203 (82%)

Query: 2   EDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAED 61
           E   AIK+D TEL+GNTPMV+LNN+V GCVARIAAKLE M+ C SVKDRIA SMI+DAE 
Sbjct: 3   EPQCAIKKDATELVGNTPMVFLNNIVVGCVARIAAKLEYMQACCSVKDRIALSMIEDAEK 62

Query: 62  KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121
           KGLITPGKT L+E TSGNTG+GLAFIAA RGY L + MPS  S+ER+I+LRA GAE+ L 
Sbjct: 63  KGLITPGKTVLVEYTSGNTGIGLAFIAALRGYKLQVTMPSYVSLERKIILRAFGAEVYLT 122

Query: 122 DSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISG 181
           D A   + +++K EE++ KTPD ++L QFENPANP IHYETTGPEIW+DSG K+DA +SG
Sbjct: 123 DPAKGIDGVIQKAEELIAKTPDSFMLNQFENPANPNIHYETTGPEIWRDSGEKIDALVSG 182

Query: 182 IGTGGTVTGAGRFLKENNPDIKV 204
           IGTGG++ GAGRFL+E NPDIK+
Sbjct: 183 IGTGGSIAGAGRFLREKNPDIKL 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130748|ref|XP_002328366.1| predicted protein [Populus trichocarpa] gi|222838081|gb|EEE76446.1| predicted protein [Populus trichocarpa]

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 159/211 (75%), Positives = 181/211 (85%), Gaps = 7/211 (3%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDR-------IAY 53
           MEDN AIK+DVTELIGNTPMVYLNNV DGCVARIAAKLE MEP SSVKDR       I +
Sbjct: 1   MEDNCAIKKDVTELIGNTPMVYLNNVADGCVARIAAKLEMMEPLSSVKDRHATCSLKIGH 60

Query: 54  SMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA 113
           SMIKDAEDKGLITPGKT LIE TSGNTG+ +AFIAA +GY  I++MP+T S+ERRIVLRA
Sbjct: 61  SMIKDAEDKGLITPGKTVLIEPTSGNTGIAVAFIAAVKGYKAILIMPATMSLERRIVLRA 120

Query: 114 LGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGG 173
           LGAE+ L D A  F+ +L+K +EIL  TP+GY+LRQFENPANP+IHYETTGPEIW+DS G
Sbjct: 121 LGAEVCLTDPAKGFQGVLDKSDEILNNTPNGYMLRQFENPANPQIHYETTGPEIWKDSRG 180

Query: 174 KVDAFISGIGTGGTVTGAGRFLKENNPDIKV 204
           KVDAF++GIGTGGTVTGAG+FLKE NP+IKV
Sbjct: 181 KVDAFVAGIGTGGTVTGAGKFLKEKNPEIKV 211

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130744|ref|XP_002328365.1| predicted protein [Populus trichocarpa] gi|222838080|gb|EEE76445.1| predicted protein [Populus trichocarpa]

 Score =  299 bits (765), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 154/204 (75%), Positives = 178/204 (87%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           MED  AIK+DVTELIGNTPMVYLNN++DGCVA IAAKLE MEPC SVKDRIAYSMIKDAE
Sbjct: 1   MEDKCAIKKDVTELIGNTPMVYLNNILDGCVACIAAKLEMMEPCFSVKDRIAYSMIKDAE 60

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
           DKGLITPGKT LIE+TSGNTG+ LA IAAA+GY +II+MP+  S+ERRIV+ A GAE+ L
Sbjct: 61  DKGLITPGKTVLIELTSGNTGIALASIAAAKGYKVIIIMPAAKSIERRIVMLAFGAELHL 120

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
            D  + ++E+L KGEEILK TP+GY+L QFENPANP+IHYETTGPEIW+DS GKVD  ++
Sbjct: 121 TDPTMGYKEVLRKGEEILKVTPNGYMLHQFENPANPRIHYETTGPEIWKDSAGKVDVLVA 180

Query: 181 GIGTGGTVTGAGRFLKENNPDIKV 204
           GIGTGGTVTGAG+FLKE  P+IKV
Sbjct: 181 GIGTGGTVTGAGKFLKEKKPEIKV 204

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144420|ref|XP_002336146.1| predicted protein [Populus trichocarpa] gi|222874214|gb|EEF11345.1| predicted protein [Populus trichocarpa]

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/203 (73%), Positives = 176/203 (86%)

Query: 2   EDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAED 61
           E+  +I +DVTELIG TP+VYLNNVVDGCVARIAAKLE MEPCSSVKDRI YSMIKDAE+
Sbjct: 3   EEKGSIAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMIKDAEE 62

Query: 62  KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121
           KGLI PG++ LIE TSGNTG+GLAF+AAA+GY LII MP++ S+ERR+VL A GAE+IL 
Sbjct: 63  KGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYRLIITMPASMSLERRMVLLAFGAELILT 122

Query: 122 DSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISG 181
           D A   +  ++K EEIL KTP+ YLL+QFENPANPKIHYETTGPE+W+ SGGKVDAF+SG
Sbjct: 123 DPARGMKGAVQKAEEILAKTPNAYLLQQFENPANPKIHYETTGPEMWKGSGGKVDAFVSG 182

Query: 182 IGTGGTVTGAGRFLKENNPDIKV 204
           IGTGGT+TGA ++LKE NPDIK+
Sbjct: 183 IGTGGTITGAAKYLKEQNPDIKI 205

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	210
TAIR|locus:2143814	323	CYSD2 "cysteine synthase D2" [	0.971	0.631	0.671	1.4e-69
TAIR|locus:2143754	323	DES1 "L-cysteine desulfhydrase	0.971	0.631	0.647	5.1e-67
TAIR|locus:2114804	324	CYSD1 "cysteine synthase D1" [	0.966	0.626	0.610	9.7e-64
TAIR|locus:2130419	322	OASA1 "O-acetylserine (thiol)	0.942	0.614	0.611	5.4e-63
TAIR|locus:2043964	392	OASB "O-acetylserine (thiol) l	0.947	0.507	0.577	4.3e-61
TAIR|locus:2080417	433	OASC "O-acetylserine (thiol) l	0.966	0.468	0.576	4.3e-61
TAIR|locus:2096454	404	CS26 "cysteine synthase 26" [A	0.947	0.492	0.547	2.1e-54
UNIPROTKB|Q43153	368	CYSC "Bifunctional L-3-cyanoal	0.942	0.538	0.505	1.9e-51
UNIPROTKB|Q76MX2	351	PCAS-1 "Bifunctional L-3-cyano	0.942	0.564	0.5	2.4e-51
UNIPROTKB|Q1KLZ2	376	CAS1 "L-3-cyanoalanine synthas	0.942	0.526	0.489	8.3e-51

TAIR|locus:2143814 CYSD2 "cysteine synthase D2" [Arabidopsis thaliana (taxid:3702)]

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 137/204 (67%), Positives = 156/204 (76%)

Query:     1 MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
             MED   IK D+TELIGNTPMVYLNNVVDGCVARIAAKLE MEPCSSVKDRIAYSMIKDAE
Sbjct:     1 MEDRCLIKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAE 60

Query:    61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
             DKGLITPGK+TLIE T+GNTG+GLA + AARGY +I+VMPST S+ERRI+LRALGAE+ L
Sbjct:    61 DKGLITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHL 120

Query:   121 ADSALRFXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
             +D  +               TP GY+ +QFENPANP+IHY TTGPEIW+DS GKVD  ++
Sbjct:   121 SDQRIGLKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVA 180

Query:   181 XXXXXXXXXXXXRFLKENNPDIKV 204
                         +FLKE N DIKV
Sbjct:   181 GVGTGGTATGVGKFLKEQNKDIKV 204

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IMP

GO:0005739 "mitochondrion" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

TAIR|locus:2143754 DES1 "L-cysteine desulfhydrase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
 Identities = 132/204 (64%), Positives = 151/204 (74%)

Query:     1 MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
             MED   IK DVTELIGNTPMVYLN +VDGCVARIAAKLE MEPCSS+KDRIAYSMIKDAE
Sbjct:     1 MEDRVLIKNDVTELIGNTPMVYLNKIVDGCVARIAAKLEMMEPCSSIKDRIAYSMIKDAE 60

Query:    61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
             DKGLITPGK+TLIE T GNTG+GLA I A+RGY +I++MPST S+ERRI+LRALGAE+ L
Sbjct:    61 DKGLITPGKSTLIEATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHL 120

Query:   121 ADSALRFXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
              D ++               TP GY+  QF NP NP+IHY TTGPEIW+DS GKVD  ++
Sbjct:   121 TDISIGIKGQLEKAKEILSKTPGGYIPHQFINPENPEIHYRTTGPEIWRDSAGKVDILVA 180

Query:   181 XXXXXXXXXXXXRFLKENNPDIKV 204
                         +FLKE N DIKV
Sbjct:   181 GVGTGGTVTGTGKFLKEKNKDIKV 204

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

TAIR|locus:2114804 CYSD1 "cysteine synthase D1" [Arabidopsis thaliana (taxid:3702)]

 Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
 Identities = 124/203 (61%), Positives = 148/203 (72%)

Query:     2 EDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAED 61
             ED  +IK D T+LIGNTPMVYLNN+VDGCVARIAAKLE MEPCSSVK+RIAY MIKDAED
Sbjct:     3 EDRCSIKDDATQLIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKERIAYGMIKDAED 62

Query:    62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121
             KGLITPGK+TLIE TSGNTG+GLAFI AA+GY +++ MPS+ S+ER+I+L ALGAE+ L 
Sbjct:    63 KGLITPGKSTLIEATSGNTGIGLAFIGAAKGYKVVLTMPSSMSLERKIILLALGAEVHLT 122

Query:   122 DSALRFXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISX 181
             D +                 PD  +L QF+NP+NP+ HY TTGPEIW+DS G+VD  ++ 
Sbjct:   123 DPSKGVQGIIDKAEEICSKNPDSIMLEQFKNPSNPQTHYRTTGPEIWRDSAGEVDILVAG 182

Query:   182 XXXXXXXXXXXRFLKENNPDIKV 204
                        RFLKE N D KV
Sbjct:   183 VGTGGTLSGSGRFLKEKNKDFKV 205

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA;IMP

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=ISS;RCA;IDA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009069 "serine family amino acid metabolic process" evidence=RCA

GO:0042545 "cell wall modification" evidence=RCA

TAIR|locus:2130419 OASA1 "O-acetylserine (thiol) lyase (OAS-TL) isoform A1" [Arabidopsis thaliana (taxid:3702)]

 Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
 Identities = 121/198 (61%), Positives = 146/198 (73%)

Query:     7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
             I +DVTELIGNTP+VYLNNV +GCV R+AAKLE MEPCSSVKDRI +SMI DAE KGLI 
Sbjct:     5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 64

Query:    67 PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
             PG++ LIE TSGNTGVGLAF AAA+GY LII MP++ S ERRI+L A G E++L D A  
Sbjct:    65 PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 124

Query:   127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                           TP+GY+L+QFENPANPKIHYETTGPEIW+ +GGK+D F+S      
Sbjct:   125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 184

Query:   187 XXXXXXRFLKENNPDIKV 204
                   ++LKE N ++K+
Sbjct:   185 TITGAGKYLKEQNANVKL 202

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;IGI;IDA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA;TAS

GO:0008152 "metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0005829 "cytosol" evidence=ISS;IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA;IMP;IDA

GO:0007568 "aging" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA;IMP

GO:0048046 "apoplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2043964 OASB "O-acetylserine (thiol) lyase B" [Arabidopsis thaliana (taxid:3702)]

 Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
 Identities = 115/199 (57%), Positives = 146/199 (73%)

Query:     7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
             I  +  +LIG TPMVYLNNVV GCVA +AAKLE MEPC SVKDRI YSMI DAE+KGLIT
Sbjct:    75 IADNAAQLIGKTPMVYLNNVVKGCVASVAAKLEIMEPCCSVKDRIGYSMITDAEEKGLIT 134

Query:    67 PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
             PGK+ L+E TSGNTG+GLAFIAA++GY LI+ MP++ S+ERR++LRA GAE++L + A  
Sbjct:   135 PGKSVLVESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLTEPAKG 194

Query:   127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                           TP+ Y+L+QF+NPANPKIHYETTGPEIW+D+ GK+D  ++      
Sbjct:   195 MTGAIQKAEEILKKTPNSYMLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAGIGTGG 254

Query:   187 XXXXXXRFLKENNPDIKVV 205
                   RF+KE  P++KV+
Sbjct:   255 TITGVGRFIKERKPELKVI 273

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009536 "plastid" evidence=TAS

GO:0019344 "cysteine biosynthetic process" evidence=RCA;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0048046 "apoplast" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2080417 OASC "O-acetylserine (thiol) lyase isoform C" [Arabidopsis thaliana (taxid:3702)]

 Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
 Identities = 117/203 (57%), Positives = 145/203 (71%)

Query:     3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDK 62
             D   I  +V++LIG TPMVYLN++  GCVA IAAKLE MEPC SVKDRI YSM+ DAE K
Sbjct:   109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQK 168

Query:    63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
             G I+PGK+ L+E TSGNTG+GLAFIAA+RGY LI+ MP++ SMERR++L+A GAE++L D
Sbjct:   169 GFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD 228

Query:   123 SALRFXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXX 182
              A                TPD Y+L+QF+NPANPKIHYETTGPEIW D+ GKVD F++  
Sbjct:   229 PAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGI 288

Query:   183 XXXXXXXXXXRFLKENNPDIKVV 205
                       RF+KE NP  +V+
Sbjct:   289 GTGGTITGVGRFIKEKNPKTQVI 311

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM;IDA;TAS

GO:0006535 "cysteine biosynthetic process from serine" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0019344 "cysteine biosynthetic process" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009507 "chloroplast" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0048868 "pollen tube development" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2096454 CS26 "cysteine synthase 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 109/199 (54%), Positives = 139/199 (69%)

Query:     7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
             I  DVT+LIG+TPMVYLN V DGC+A IAAKLE+MEPC SVKDRI  SMI +AE+ G IT
Sbjct:    99 IAEDVTQLIGSTPMVYLNRVTDGCLADIAAKLESMEPCRSVKDRIGLSMINEAENSGAIT 158

Query:    67 PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
             P KT L+E T+GNTG+G+AF+AAA+GY LI+ MP++ ++ERR++LRALGAEI+L +    
Sbjct:   159 PRKTVLVEPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPEKG 218

Query:   127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                           T + Y+ +QF+N AN KIH+ETTGPEIW+D+ G VD F++      
Sbjct:   219 LKGAVDKAKEIVLKTKNAYMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAGIGTGG 278

Query:   187 XXXXXXRFLKENNPDIKVV 205
                    FLK  N DIKVV
Sbjct:   279 TVTGTGGFLKMMNKDIKVV 297

GO:0003824 "catalytic activity" evidence=IEA

GO:0004124 "cysteine synthase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM

GO:0019344 "cysteine biosynthetic process" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=IMP

GO:0015979 "photosynthesis" evidence=IMP

GO:0090322 "regulation of superoxide metabolic process" evidence=IMP

GO:0009643 "photosynthetic acclimation" evidence=IMP

GO:0031977 "thylakoid lumen" evidence=IDA

UNIPROTKB|Q43153 CYSC "Bifunctional L-3-cyanoalanine synthase/cysteine synthase, mitochondrial" [Spinacia oleracea (taxid:3562)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 100/198 (50%), Positives = 136/198 (68%)

Query:     7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
             IK +V++LIG TP+VYL+ + +G  A IA K E M+P +SVKDR A +MI+DAE KGLI+
Sbjct:    49 IKTNVSQLIGRTPLVYLSKISEGSGAYIAVKQEMMQPTASVKDRPALAMIEDAEKKGLIS 108

Query:    67 PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
             PGKT LIE TSGN G+ +AF+AA +GY +++ MPS  SMERR+V+RA GA++IL D    
Sbjct:   109 PGKTVLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSMERRVVMRAFGADLILTDPDKG 168

Query:   127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                           TPDG++L+QF NPAN ++H+ETTGPEIW+D+ GKVD F+       
Sbjct:   169 MGGTVKKANQLLDSTPDGFMLQQFNNPANTQVHFETTGPEIWEDTQGKVDIFVMGIGSGG 228

Query:   187 XXXXXXRFLKENNPDIKV 204
                   R+LK  NP++K+
Sbjct:   229 TVSGVGRYLKSQNPNVKI 246

GO:0004124 "cysteine synthase activity" evidence=IDA

GO:0006534 "cysteine metabolic process" evidence=IDA

GO:0019499 "cyanide metabolic process" evidence=IDA

GO:0050017 "L-3-cyanoalanine synthase activity" evidence=IDA

UNIPROTKB|Q76MX2 PCAS-1 "Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial" [Solanum tuberosum (taxid:4113)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 99/198 (50%), Positives = 132/198 (66%)

Query:     7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
             IK  V++LIG TP+VYLN V +GC A IA K E M+P SS+KDR A++MI DAE KGLIT
Sbjct:    32 IKTQVSQLIGKTPLVYLNKVSEGCGAYIAVKQEMMQPTSSIKDRPAFAMINDAEKKGLIT 91

Query:    67 PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
             PGKTTLIE TSGN G+ +AF+AA +GY +I+ MPS  S+ERR+ +RA GA+++  D    
Sbjct:    92 PGKTTLIEPTSGNMGISMAFMAAMKGYKMILTMPSYTSLERRVTMRAFGADLVTTDPTKG 151

Query:   127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                           TP+ Y+L+QF NPAN + H+ETTGPEIW+D+ G VD F+       
Sbjct:   152 MGGTIKKAYDLLESTPNAYMLQQFSNPANTQAHFETTGPEIWEDTQGNVDIFVMGIGSGG 211

Query:   187 XXXXXXRFLKENNPDIKV 204
                   ++LK  NP++K+
Sbjct:   212 TVSGVGQYLKSKNPNVKI 229

GO:0004124 "cysteine synthase activity" evidence=IDA

GO:0006534 "cysteine metabolic process" evidence=IDA

GO:0019499 "cyanide metabolic process" evidence=IDA

GO:0050017 "L-3-cyanoalanine synthase activity" evidence=IDA

UNIPROTKB|Q1KLZ2 CAS1 "L-3-cyanoalanine synthase 1, mitochondrial" [Malus x domestica (taxid:3750)]

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 97/198 (48%), Positives = 132/198 (66%)

Query:     7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
             IK  V++LIG TP+VYLN V +GC A IA K E  +P +S+KDR A SMI DAE+KGLIT
Sbjct:    55 IKTQVSQLIGRTPIVYLNKVTEGCGAYIAVKQEMFQPTASIKDRPALSMINDAEEKGLIT 114

Query:    67 PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
             PG+T LIE TSGN G+ +AF+AA RGY +++ MPS  S+ERR+ +R  GA++IL D    
Sbjct:   115 PGETILIEPTSGNMGISMAFMAAMRGYKMVLTMPSYTSLERRVCMRCFGADLILTDPTKG 174

Query:   127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                           TP+ Y+L+QF NPAN K+H+ETTGPEIW+D+ G+VD F+       
Sbjct:   175 MGGTVKKAYDLLESTPNAYMLQQFSNPANTKVHFETTGPEIWEDTNGQVDIFVMGIGSGG 234

Query:   187 XXXXXXRFLKENNPDIKV 204
                   ++LK  NP++++
Sbjct:   235 TVSGVGQYLKSKNPNVQI 252

GO:0009836 "fruit ripening, climacteric" evidence=IDA

GO:0050017 "L-3-cyanoalanine synthase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P37887	CYSK_BACSU	2, ., 5, ., 1, ., 4, 7	0.525	0.9285	0.6331	yes	no
O81154	CYSK_SOLTU	2, ., 5, ., 1, ., 4, 7	0.7070	0.9428	0.6092	N/A	no
Q8CMT6	CYSK_STAES	2, ., 5, ., 1, ., 4, 7	0.5076	0.9142	0.6193	yes	no
O32978	CYSK_MYCLE	2, ., 5, ., 1, ., 4, 7	0.515	0.9476	0.6419	yes	no
Q7DDL5	CYSK_NEIMB	2, ., 5, ., 1, ., 4, 7	0.52	0.9428	0.6387	yes	no
Q43317	CYSK_CITLA	2, ., 5, ., 1, ., 5, 2	0.725	0.9523	0.6153	N/A	no
Q5HRP1	CYSK_STAEQ	2, ., 5, ., 1, ., 4, 7	0.5076	0.9142	0.6193	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00031107001	RecName- Full=Cysteine synthase; EC=2.5.1.47; (323 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00000669001	SubName- Full=Chromosome chr8 scaffold_106, whole genome shotgun sequence; (403 aa)	•					•	•		0.957
	GSVIVG00024596001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (668 aa)				•		•	•		0.950
	GSVIVG00008446001	SubName- Full=Chromosome undetermined scaffold_1460, whole genome shotgun sequence; (261 aa)	•					•	•		0.945
	GSVIVG00016589001	SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (290 aa)	•					•	•		0.943
	GSVIVG00011752001	SubName- Full=Chromosome undetermined scaffold_334, whole genome shotgun sequence; (307 aa)	•					•	•		0.935
	GSVIVG00033340001	SubName- Full=Chromosome chr19 scaffold_66, whole genome shotgun sequence; (304 aa)	•					•	•		0.928
	GSVIVG00033361001	RecName- Full=Cysteine synthase; EC=2.5.1.47; (373 aa)			•			•	•	•	0.916
	GSVIVG00033683001	RecName- Full=Cysteine synthase; EC=2.5.1.47; (390 aa)			•			•	•	•	0.905
	GSVIVG00026889001	RecName- Full=Cysteine synthase; EC=2.5.1.47; (371 aa)			•			•	•	•	0.905
	GSVIVG00031101001	RecName- Full=Cysteine synthase; EC=2.5.1.47; (251 aa)			•			•	•	•	0.905

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	210
PLN02565	322	PLN02565, PLN02565, cysteine synthase	1e-116
PLN00011	323	PLN00011, PLN00011, cysteine synthase	1e-114
TIGR01136	299	TIGR01136, cysKM, cysteine synthase	1e-100
TIGR01139	298	TIGR01139, cysK, cysteine synthase A	4e-96
PLN03013	429	PLN03013, PLN03013, cysteine synthase	8e-96
cd01561	291	cd01561, CBS_like, CBS_like: This subgroup include	1e-95
COG0031	300	COG0031, CysK, Cysteine synthase [Amino acid trans	1e-95
PLN02556	368	PLN02556, PLN02556, cysteine synthase/L-3-cyanoala	3e-92
PRK10717	330	PRK10717, PRK10717, cysteine synthase A; Provision	3e-81
PRK11761	296	PRK11761, cysM, cysteine synthase B; Provisional	2e-74
TIGR01137	454	TIGR01137, cysta_beta, cystathionine beta-synthase	5e-69
TIGR01138	290	TIGR01138, cysM, cysteine synthase B	1e-62
cd00640	244	cd00640, Trp-synth-beta_II, Tryptophan synthase be	2e-60
TIGR03945	304	TIGR03945, PLP_SbnA_fam, 2,3-diaminopropionate bio	6e-54
pfam00291	295	pfam00291, PALP, Pyridoxal-phosphate dependent enz	4e-50
PLN02356	423	PLN02356, PLN02356, phosphateglycerate kinase	9e-37
cd01562	304	cd01562, Thr-dehyd, Threonine dehydratase: The fir	7e-17
COG1171	347	COG1171, IlvA, Threonine dehydratase [Amino acid t	1e-16
TIGR01127	380	TIGR01127, ilvA_1Cterm, threonine ammonia-lyase, m	3e-11
cd01563	324	cd01563, Thr-synth_1, Threonine synthase is a pyri	2e-10
PRK08638	333	PRK08638, PRK08638, threonine dehydratase; Validat	2e-10
TIGR01124	499	TIGR01124, ilvA_2Cterm, threonine ammonia-lyase, b	7e-10
PRK12483	521	PRK12483, PRK12483, threonine dehydratase; Reviewe	4e-09
TIGR02079	409	TIGR02079, THD1, threonine dehydratase	1e-08
PRK09224	504	PRK09224, PRK09224, threonine dehydratase; Reviewe	1e-08
PLN02550	591	PLN02550, PLN02550, threonine dehydratase	9e-08
PRK06381	319	PRK06381, PRK06381, threonine synthase; Validated	2e-07
PRK06382	406	PRK06382, PRK06382, threonine dehydratase; Provisi	2e-07
PRK08526	403	PRK08526, PRK08526, threonine dehydratase; Provisi	6e-07
PRK06815	317	PRK06815, PRK06815, hypothetical protein; Provisio	6e-07
PRK08198	404	PRK08198, PRK08198, threonine dehydratase; Provisi	1e-06
PRK06608	338	PRK06608, PRK06608, threonine dehydratase; Provisi	2e-06
COG0498	411	COG0498, ThrC, Threonine synthase [Amino acid tran	2e-06
PRK06450	338	PRK06450, PRK06450, threonine synthase; Validated	3e-06
PRK06721	352	PRK06721, PRK06721, threonine synthase; Reviewed	1e-05
PRK05638	442	PRK05638, PRK05638, threonine synthase; Validated	2e-05
PRK06110	322	PRK06110, PRK06110, hypothetical protein; Provisio	3e-05
TIGR03528	396	TIGR03528, 2_3_DAP_am_ly, diaminopropionate ammoni	4e-05
TIGR02991	317	TIGR02991, ectoine_eutB, ectoine utilization prote	5e-05
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	6e-05
cd06448	316	cd06448, L-Ser-dehyd, Serine dehydratase is a pyri	9e-05
TIGR01747	376	TIGR01747, diampropi_NH3ly, diaminopropionate ammo	1e-04
PRK06352	351	PRK06352, PRK06352, threonine synthase; Validated	6e-04
PRK08206	399	PRK08206, PRK08206, diaminopropionate ammonia-lyas	7e-04
PRK08329	347	PRK08329, PRK08329, threonine synthase; Validated	0.002
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	0.004
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	0.004

>gnl|CDD|166206 PLN02565, PLN02565, cysteine synthase

 Score =  333 bits (856), Expect = e-116
 Identities = 146/199 (73%), Positives = 174/199 (87%)

Query: 6   AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           +I +DVTELIG TP+VYLNNVVDGCVARIAAKLE MEPCSSVKDRI YSMI DAE+KGLI
Sbjct: 4   SIAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMITDAEEKGLI 63

Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
            PG++ LIE TSGNTG+GLAF+AAA+GY LII MP++ S+ERRI+L A GAE++L D A 
Sbjct: 64  KPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPAK 123

Query: 126 RFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTG 185
             +  ++K EEIL KTP+ Y+L+QFENPANPKIHYETTGPEIW+ +GGKVDAF+SGIGTG
Sbjct: 124 GMKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGPEIWKGTGGKVDAFVSGIGTG 183

Query: 186 GTVTGAGRFLKENNPDIKV 204
           GT+TGAG++LKE NPDIK+
Sbjct: 184 GTITGAGKYLKEQNPDIKL 202

Length = 322

>gnl|CDD|177651 PLN00011, PLN00011, cysteine synthase

 Score =  327 bits (839), Expect = e-114
 Identities = 155/204 (75%), Positives = 176/204 (86%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           MED   IK DVTELIGNTPMVYLNN+VDGCVARIAAKLE MEPCSSVKDRIAYSMIKDAE
Sbjct: 1   MEDRCLIKNDVTELIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAE 60

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
           DKGLITPGK+TLIE T+GNTG+GLA I AARGY +I+VMPST S+ERRI+LRALGAE+ L
Sbjct: 61  DKGLITPGKSTLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHL 120

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
            D ++  + +LEK EEIL KTP GY+ +QFENPANP+IHY TTGPEIW+DS GKVD  ++
Sbjct: 121 TDQSIGLKGMLEKAEEILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVA 180

Query: 181 GIGTGGTVTGAGRFLKENNPDIKV 204
           G+GTGGT TG G+FLKE N DIKV
Sbjct: 181 GVGTGGTATGVGKFLKEKNKDIKV 204

Length = 323

>gnl|CDD|233286 TIGR01136, cysKM, cysteine synthase

 Score =  291 bits (748), Expect = e-100
 Identities = 113/195 (57%), Positives = 148/195 (75%), Gaps = 1/195 (0%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKT 70
           + ELIGNTP+V LN +  GC AR+ AKLE   P  SVKDRIA SMI+DAE +GL+ PG  
Sbjct: 1   IEELIGNTPLVRLNRLAPGCDARVLAKLEGRNPSGSVKDRIALSMIEDAEKRGLLKPG-D 59

Query: 71  TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEI 130
           T+IE TSGNTG+ LA +AAA+GY LI+ MP T S+ERR +LRA GAE+IL  +    +  
Sbjct: 60  TIIEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAEEGMKGA 119

Query: 131 LEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTG 190
           ++K EE+  +T    +L QFENPANP+ HY+TTGPEIW+D+ G++D F++G+GTGGT+TG
Sbjct: 120 IDKAEELAAETNKYVMLDQFENPANPEAHYKTTGPEIWRDTDGRIDHFVAGVGTGGTITG 179

Query: 191 AGRFLKENNPDIKVV 205
            GR+LKE NP+IK+V
Sbjct: 180 VGRYLKEQNPNIKIV 194

This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff [Amino acid biosynthesis, Serine family]. Length = 299

>gnl|CDD|233288 TIGR01139, cysK, cysteine synthase A

 Score =  281 bits (721), Expect = 4e-96
 Identities = 112/196 (57%), Positives = 147/196 (75%), Gaps = 3/196 (1%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKT 70
           ++ELIGNTP+V LN + +GC A +  KLE   P  SVKDRIA +MI DAE +GL+ PG  
Sbjct: 1   ISELIGNTPLVRLNRI-EGCNANVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPG-K 58

Query: 71  TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEI 130
           T++E TSGNTG+ LA +AAARGY LI+ MP T S+ERR +L+A GAE++L   A   +  
Sbjct: 59  TIVEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAEGMKGA 118

Query: 131 LEKGEEILKKTPDGY-LLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT 189
           + K EEI   TP+ Y +L+QFENPANP+IH +TTGPEIW+D+ GK+DAF++G+GTGGT+T
Sbjct: 119 IAKAEEIAASTPNSYFMLQQFENPANPEIHRKTTGPEIWRDTDGKLDAFVAGVGTGGTIT 178

Query: 190 GAGRFLKENNPDIKVV 205
           G G  LKE  P+IK+V
Sbjct: 179 GVGEVLKEQKPNIKIV 194

This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate [Amino acid biosynthesis, Serine family]. Length = 298

>gnl|CDD|178587 PLN03013, PLN03013, cysteine synthase

 Score =  285 bits (729), Expect = 8e-96
 Identities = 133/203 (65%), Positives = 164/203 (80%)

Query: 3   DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDK 62
           D   I  +V++LIG TPMVYLN++  GCVA IAAKLE MEPC SVKDRI YSM+ DAE K
Sbjct: 109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQK 168

Query: 63  GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
           G I+PGK+ L+E TSGNTG+GLAFIAA+RGY LI+ MP++ SMERR++L+A GAE++L D
Sbjct: 169 GFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD 228

Query: 123 SALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGI 182
            A      ++K EEILK TPD Y+L+QF+NPANPKIHYETTGPEIW D+ GKVD F++GI
Sbjct: 229 PAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGI 288

Query: 183 GTGGTVTGAGRFLKENNPDIKVV 205
           GTGGT+TG GRF+KE NP  +V+
Sbjct: 289 GTGGTITGVGRFIKEKNPKTQVI 311

Length = 429

>gnl|CDD|107204 cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase

 Score =  279 bits (717), Expect = 1e-95
 Identities = 111/193 (57%), Positives = 140/193 (72%), Gaps = 3/193 (1%)

Query: 16  GNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEV 75
           GNTP+V LN +  G  A I AKLE   P  SVKDRIA  MI+DAE +GL+ PG TT+IE 
Sbjct: 1   GNTPLVRLNRLSPGTGAEIYAKLEFFNPGGSVKDRIALYMIEDAEKRGLLKPG-TTIIEP 59

Query: 76  TSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL--ADSALRFEEILEK 133
           TSGNTG+GLA +AAA+GY  IIVMP T S E+R +LRALGAE+IL     A   +  + K
Sbjct: 60  TSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAEADGMKGAIAK 119

Query: 134 GEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGR 193
             E+  +TP+ + L QFENPANP+ HYETT PEIW+   GKVDAF++G+GTGGT+TG  R
Sbjct: 120 ARELAAETPNAFWLNQFENPANPEAHYETTAPEIWEQLDGKVDAFVAGVGTGGTITGVAR 179

Query: 194 FLKENNPDIKVVL 206
           +LKE NP++++V 
Sbjct: 180 YLKEKNPNVRIVG 192

CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine. Length = 291

>gnl|CDD|223110 COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism]

 Score =  280 bits (718), Expect = 1e-95
 Identities = 113/202 (55%), Positives = 145/202 (71%), Gaps = 3/202 (1%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I   + +LIGNTP+V LN +  G    I AKLE+  P  SVKDRIA  MI+DAE +GL+ 
Sbjct: 1   IYESILDLIGNTPLVRLNRLSPGTGVEIYAKLESFNPGGSVKDRIALYMIEDAEKRGLLK 60

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA-L 125
           PG  T++E TSGNTG+ LA +AAA+GY LIIVMP T S ERR +LRALGAE+IL   A  
Sbjct: 61  PG-GTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPG 119

Query: 126 RFEEILEKGEEILKKTPD-GYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGT 184
             +  +E+ +E+  + P     L QFENPANP+ HYETTGPEIWQ + GKVDAF++G+GT
Sbjct: 120 NMKGAIERAKELAAEIPGYAVWLNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGT 179

Query: 185 GGTVTGAGRFLKENNPDIKVVL 206
           GGT+TG  R+LKE NP++++V 
Sbjct: 180 GGTITGVARYLKERNPNVRIVA 201

Length = 300

>gnl|CDD|178171 PLN02556, PLN02556, cysteine synthase/L-3-cyanoalanine synthase

 Score =  274 bits (701), Expect = 3e-92
 Identities = 113/198 (57%), Positives = 152/198 (76%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           IK D ++LIG TP+VYLN V +GC A IAAK E  +P SS+KDR A +MI+DAE K LIT
Sbjct: 49  IKTDASQLIGKTPLVYLNKVTEGCGAYIAAKQEMFQPTSSIKDRPALAMIEDAEKKNLIT 108

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGKTTLIE TSGN G+ LAF+AA +GY +I+ MPS  S+ERR+ +RA GAE++L D    
Sbjct: 109 PGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTKG 168

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
               ++K  E+L+ TPD ++L+QF NPAN ++H+ETTGPEIW+D+ G+VD F+ GIG+GG
Sbjct: 169 MGGTVKKAYELLESTPDAFMLQQFSNPANTQVHFETTGPEIWEDTLGQVDIFVMGIGSGG 228

Query: 187 TVTGAGRFLKENNPDIKV 204
           TV+G G++LK  NP++K+
Sbjct: 229 TVSGVGKYLKSKNPNVKI 246

Length = 368

>gnl|CDD|182672 PRK10717, PRK10717, cysteine synthase A; Provisional

 Score =  244 bits (626), Expect = 3e-81
 Identities = 103/215 (47%), Positives = 139/215 (64%), Gaps = 24/215 (11%)

Query: 7   IKRDVTELIGNTPMVYLNNVVD--GCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGL 64
           I  DV++ IGNTP++ LN   +  GC   I  K E + P  SVKDR A ++I DAE +GL
Sbjct: 3   IFEDVSDTIGNTPLIRLNRASEATGC--EILGKAEFLNPGGSVKDRAALNIIWDAEKRGL 60

Query: 65  ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS- 123
           + PG T ++E T+GNTG+GLA +AAARGY  +IVMP T S E++ +LRALGAE++L  + 
Sbjct: 61  LKPGGT-IVEGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119

Query: 124 -----------ALRFEEILEKGEEILKKTPDGYL-LRQFENPANPKIHYETTGPEIWQDS 171
                      A R        EE++   P+G +   QF+NPAN + HYETTGPEIW+ +
Sbjct: 120 PYANPNNYVKGAGR------LAEELVASEPNGAIWANQFDNPANREAHYETTGPEIWEQT 173

Query: 172 GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVL 206
            GKVD F+  +GTGGT+ G  R+LKE NP +K+VL
Sbjct: 174 DGKVDGFVCAVGTGGTLAGVSRYLKETNPKVKIVL 208

Length = 330

>gnl|CDD|236972 PRK11761, cysM, cysteine synthase B; Provisional

 Score =  225 bits (577), Expect = 2e-74
 Identities = 92/193 (47%), Positives = 120/193 (62%), Gaps = 2/193 (1%)

Query: 13  ELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTL 72
           + IGNTP+V L  +       I AKLE   P  SVKDR A SMI  AE +G I PG  TL
Sbjct: 8   DTIGNTPLVKLQRLPPDRGNTILAKLEGNNPAGSVKDRPALSMIVQAEKRGEIKPG-DTL 66

Query: 73  IEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILE 132
           IE TSGNTG+ LA IAA +GY + ++MP   S ERR  +RA GAE+IL       E   +
Sbjct: 67  IEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPKEQGMEGARD 126

Query: 133 KGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAG 192
              ++  +  +G +L QF NP NP  HYETTGPEIW+ + G++  F+S +GT GT+ G  
Sbjct: 127 LALQMQAEG-EGKVLDQFANPDNPLAHYETTGPEIWRQTEGRITHFVSSMGTTGTIMGVS 185

Query: 193 RFLKENNPDIKVV 205
           R+LKE NP +++V
Sbjct: 186 RYLKEQNPAVQIV 198

Length = 296

>gnl|CDD|233287 TIGR01137, cysta_beta, cystathionine beta-synthase

 Score =  217 bits (554), Expect = 5e-69
 Identities = 97/202 (48%), Positives = 134/202 (66%), Gaps = 4/202 (1%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I+ ++ +LIGNTP+V LN V  G    + AK E   P  SVKDRIA  MI+DAE  G + 
Sbjct: 1   IRDNIIDLIGNTPLVRLNKVSKGIKCELLAKCEFFNPGGSVKDRIALRMIEDAEASGRLK 60

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG  T+IE TSGNTG+GLA +AA +GY  IIV+P   S E+  VL+ALGAEI+   +A  
Sbjct: 61  PG-DTIIEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTAAA 119

Query: 127 F---EEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIG 183
           F   E  +   + ++++ P  ++L Q+ NP+NP  HY+ TGPEI +   GK+D F++G G
Sbjct: 120 FDSPESHIGVAKRLVREIPGAHILDQYNNPSNPLAHYDGTGPEILEQCEGKLDMFVAGAG 179

Query: 184 TGGTVTGAGRFLKENNPDIKVV 205
           TGGT+TG  R+LKE+NP  ++V
Sbjct: 180 TGGTITGIARYLKESNPKCRIV 201

Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven [Amino acid biosynthesis, Serine family]. Length = 454

>gnl|CDD|130208 TIGR01138, cysM, cysteine synthase B

 Score =  196 bits (499), Expect = 1e-62
 Identities = 90/195 (46%), Positives = 120/195 (61%), Gaps = 2/195 (1%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKT 70
           + + +GNTP+V L  +     + +  KLE   P  SVKDR A SMI +AE +G I PG  
Sbjct: 2   IEQTVGNTPLVRLQRMGPENGSEVWLKLEGNNPAGSVKDRPALSMIVEAEKRGEIKPGDV 61

Query: 71  TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEI 130
            LIE TSGNTG+ LA IAA +GY + ++MP   S ER+  +RA GAE+IL       E  
Sbjct: 62  -LIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTKEEGMEGA 120

Query: 131 LEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTG 190
            +   E+  +   G LL QF NP NP  HY +TGPEIWQ +GG++  F+S +GT GT+ G
Sbjct: 121 RDLALELANRGE-GKLLDQFNNPDNPYAHYTSTGPEIWQQTGGRITHFVSSMGTTGTIMG 179

Query: 191 AGRFLKENNPDIKVV 205
             RFLKE NP +++V
Sbjct: 180 VSRFLKEQNPPVQIV 194

CysM differs from CysK in that it can also use thiosulfate instead of sulfide, to produce cysteine thiosulfonate instead of cysteine. Alternate name: O-acetylserine (thiol)-lyase [Amino acid biosynthesis, Serine family]. Length = 290

>gnl|CDD|107202 cd00640, Trp-synth-beta_II, Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions

 Score =  188 bits (481), Expect = 2e-60
 Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 6/189 (3%)

Query: 18  TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTS 77
           TP+V L  +     A I  KLE + P  S KDR A ++I  AE++G +   K  +IE T 
Sbjct: 1   TPLVRLKRLSKLGGANIYLKLEFLNPTGSFKDRGALNLILLAEEEGKL--PKGVIIESTG 58

Query: 78  GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEI 137
           GNTG+ LA  AA  G    IVMP   S E+   +RALGAE++L      F++ +   +E+
Sbjct: 59  GNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD--FDDAIALAKEL 116

Query: 138 LKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGG-KVDAFISGIGTGGTVTGAGRFLK 196
            ++ P  Y + QF+NPAN      T G EI +  GG K DA +  +G GG + G  R LK
Sbjct: 117 AEEDPGAYYVNQFDNPANIAGQG-TIGLEILEQLGGQKPDAVVVPVGGGGNIAGIARALK 175

Query: 197 ENNPDIKVV 205
           E  P++KV+
Sbjct: 176 ELLPNVKVI 184

This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine. Length = 244

>gnl|CDD|234409 TIGR03945, PLP_SbnA_fam, 2,3-diaminopropionate biosynthesis protein SbnA

 Score =  173 bits (442), Expect = 6e-54
 Identities = 76/199 (38%), Positives = 104/199 (52%), Gaps = 6/199 (3%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKT 70
           +  LIGNTP+V L  +      R+ AKLE   P  S+KDR A  +++ A  +G ITPG T
Sbjct: 1   ILSLIGNTPLVKLERLFPDAPFRLFAKLEGFNPGGSIKDRPALYILEAAIKRGRITPG-T 59

Query: 71  TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEI 130
           T+IE +SGN G+ LA I A +G   I V+    S +   +LRA GAE+            
Sbjct: 60  TIIESSSGNLGIALAMICAYKGLRFICVVDPNISPQNLKLLRAYGAEVEKVTEPDETGGY 119

Query: 131 L----EKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
           L     +  E+L   PD Y   Q+ NP NP+ HY  TG EI +     +D    G+ T G
Sbjct: 120 LGTRIARVRELLASIPDAYWPNQYANPDNPRAHYHGTGREIARAF-PPLDYLFVGVSTTG 178

Query: 187 TVTGAGRFLKENNPDIKVV 205
           T+ G  R L+E  P+ KV+
Sbjct: 179 TLMGCSRRLRERGPNTKVI 197

Members of this family include SbnA, a protein of the staphyloferrin B biosynthesis operon of Staphylococcus aureus. SbnA and SbnB together appear to synthesize 2,3-diaminopropionate, a precursor of certain siderophores and other secondary metabolites. SbnA is a pyridoxal phosphate-dependent enzyme [Cellular processes, Biosynthesis of natural products]. Length = 304

>gnl|CDD|215840 pfam00291, PALP, Pyridoxal-phosphate dependent enzyme

 Score =  164 bits (416), Expect = 4e-50
 Identities = 72/199 (36%), Positives = 106/199 (53%), Gaps = 13/199 (6%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKT 70
           ++  IG TP+V L +      AR+  KLE++ P  S KDR A  ++  A ++G       
Sbjct: 1   ISLGIGPTPLVRLPS--PLLGARVYLKLESLNPTGSFKDRGAAYLLLRALERG------A 52

Query: 71  TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEE- 129
           T++E +SGNTG  LA  AA  G  + IV+P   S  + +++RALGAE+IL  S   +++ 
Sbjct: 53  TVVEASSGNTGRALAAAAARLGLKVTIVVPEGASPGKLLLMRALGAEVILVVSEGDYDDA 112

Query: 130 --ILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSG-GKVDAFISGIGTGG 186
             + E+  E+L        L Q+ NP N    Y+T G EI +  G G  DA +  +G GG
Sbjct: 113 LELAEEAAELLAAYDGPIPLGQYNNP-NVIAGYKTIGLEILEQLGQGDPDAVVVPVGGGG 171

Query: 187 TVTGAGRFLKENNPDIKVV 205
              G  R LKE  P I+V+
Sbjct: 172 LAAGIARGLKELGPGIRVI 190

Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4. Length = 295

>gnl|CDD|215204 PLN02356, PLN02356, phosphateglycerate kinase

 Score =  132 bits (333), Expect = 9e-37
 Identities = 80/243 (32%), Positives = 120/243 (49%), Gaps = 42/243 (17%)

Query: 5   NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGL 64
              +  + + IGNTP++ +N++ +     I  K E + P  SVKDR+A  +I++A + G 
Sbjct: 41  KKPRNGLIDAIGNTPLIRINSLSEATGCEILGKCEFLNPGGSVKDRVAVKIIEEALESGQ 100

Query: 65  ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI------ 118
           + PG   + E ++G+T + LA +A A G    +V+P   ++E+  +L ALGA +      
Sbjct: 101 LFPGGV-VTEGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRPV 159

Query: 119 -------------ILADSALRFEEILEKGEEI----LKKT------------------PD 143
                          A  A        KG E     L+KT                    
Sbjct: 160 SITHKDHYVNIARRRALEANELASKRRKGSETDGIHLEKTNGCISEEEKENSLFSSSCTG 219

Query: 144 GYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIK 203
           G+   QFEN AN + HYE TGPEIW+ + G +DAF++  GTGGT+ G  RFL+E NP+IK
Sbjct: 220 GFFADQFENLANFRAHYEGTGPEIWEQTQGNLDAFVAAAGTGGTLAGVSRFLQEKNPNIK 279

Query: 204 VVL 206
             L
Sbjct: 280 CFL 282

Length = 423

>gnl|CDD|107205 cd01562, Thr-dehyd, Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen

 Score = 76.8 bits (190), Expect = 7e-17
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 35/201 (17%)

Query: 18  TPMVY---LNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMI----KDAEDKGLITPGKT 70
           TP++    L+ ++    A +  K E ++   S K R AY+ +    ++   KG++     
Sbjct: 18  TPLLTSPTLSELLG---AEVYLKCENLQKTGSFKIRGAYNKLLSLSEEERAKGVVA---- 70

Query: 71  TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEI 130
                ++GN   G+A+ A   G    IVMP T    +    RA GAE++L      F+E 
Sbjct: 71  ----ASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGE--DFDEA 124

Query: 131 LEKGEEILKKTPDGYLLRQFENPANPKIHYE------TTGPEIWQDSGGKVDAFISGIGT 184
             K  E+ ++   G     F +P +     +      T G EI +     +DA    +G 
Sbjct: 125 EAKARELAEEE--GLT---FIHPFD---DPDVIAGQGTIGLEILEQV-PDLDAVFVPVGG 175

Query: 185 GGTVTGAGRFLKENNPDIKVV 205
           GG + G    +K  +P+ KV+
Sbjct: 176 GGLIAGIATAVKALSPNTKVI 196

Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions. Length = 304

>gnl|CDD|224092 COG1171, IlvA, Threonine dehydratase [Amino acid transport and metabolism]

 Score = 76.5 bits (189), Expect = 1e-16
 Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 15/192 (7%)

Query: 18  TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTS 77
           TP+    ++ +   A I  K E ++P  S K R AY+ +    ++     G   +I  ++
Sbjct: 26  TPLQRSPSLSERLGAEIYLKRENLQPVGSFKIRGAYNKLSSLSEEEERAAG---VIAASA 82

Query: 78  GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEI 137
           GN   G+A+ A   G    IVMP T    +    R  GAE+IL      F++     EE+
Sbjct: 83  GNHAQGVAYAAKRLGIKATIVMPETTPKIKVDATRGYGAEVILHGD--NFDDAYAAAEEL 140

Query: 138 LKKTPDGYLLRQFENPANPKIH----YETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGR 193
            ++      +  F++P            T   EI +      DA    +G GG ++G   
Sbjct: 141 AEEE-GLTFVPPFDDP-----DVIAGQGTIALEILEQLPDLPDAVFVPVGGGGLISGIAT 194

Query: 194 FLKENNPDIKVV 205
            LK  +P+IKV+
Sbjct: 195 ALKALSPEIKVI 206

Length = 347

>gnl|CDD|130197 TIGR01127, ilvA_1Cterm, threonine ammonia-lyase, medium form

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 17/192 (8%)

Query: 18  TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTS 77
           TP++Y   + D   + +  KLE ++   S K R A + I +  +       +  ++  ++
Sbjct: 1   TPLIYSTTLSDITGSEVYLKLENLQKTGSFKIRGALNKIANLSEDQ----RQRGVVAASA 56

Query: 78  GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEI 137
           GN   G+A+ A   G   +IVMP +    +    ++ GAE+IL      ++E       +
Sbjct: 57  GNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVIL--HGDDYDEAYAFATSL 114

Query: 138 LKKTPDGY-LLRQFENP---ANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGR 193
            ++   G   +  F++    A       T G EI +D    VD  I  +G GG ++G   
Sbjct: 115 AEEE--GRVFVHPFDDEFVMAGQG----TIGLEIMED-IPDVDTVIVPVGGGGLISGVAS 167

Query: 194 FLKENNPDIKVV 205
             K+ NP++KV+
Sbjct: 168 AAKQINPNVKVI 179

A form of threonine dehydratase with two copies of the C-terminal domain pfam00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes [Amino acid biosynthesis, Pyruvate family]. Length = 380

>gnl|CDD|107206 cd01563, Thr-synth_1, Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate

 Score = 59.1 bits (144), Expect = 2e-10
 Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 16/186 (8%)

Query: 16  GNTPMVYLNNVVD-GCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIE 74
           GNTP+V    + +      +  K E + P  S KDR     +  A  K L   G   +  
Sbjct: 21  GNTPLVRAPRLGERLGGKNLYVKDEGLNPTGSFKDRGMTVAVSKA--KEL---GVKAVAC 75

Query: 75  VTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKG 134
            ++GNT   LA  AA  G   ++ +P+  ++ +     A GA ++  +    F++ L   
Sbjct: 76  ASTGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG--NFDDALRLV 133

Query: 135 EEILKKTPDGYLLRQFENPANP-KIH-YETTGPEIWQDSGGKV-DAFISGIGTGGTVTGA 191
            E+ ++    YL     N  NP ++   +T   EI +  G +V D  +  +G GG +T  
Sbjct: 134 RELAEENW-IYLS----NSLNPYRLEGQKTIAFEIAEQLGWEVPDYVVVPVGNGGNITAI 188

Query: 192 GRFLKE 197
            +  KE
Sbjct: 189 WKGFKE 194

It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants. Length = 324

>gnl|CDD|236317 PRK08638, PRK08638, threonine dehydratase; Validated

 Score = 58.6 bits (142), Expect = 2e-10
 Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 23/212 (10%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAY---SMIK 57
           ++D    K+ +   I  TP+   N + + C   I  KLE M+   S K R A+   S + 
Sbjct: 11  IDDIIEAKQRLAGRIRKTPLPRSNYLSERCKGEIFLKLENMQRTGSFKIRGAFNKLSSLT 70

Query: 58  DAE-DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGA 116
           DAE  KG++          ++GN   G+A   A  G +  +VMP      +       GA
Sbjct: 71  DAEKRKGVVA--------CSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGA 122

Query: 117 EIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPAN-PKI--HYETTGPEIWQDSGG 173
           E++L      F + + K EEI+++       R F  P + PK+     T G EI +D   
Sbjct: 123 EVVLHGD--NFNDTIAKVEEIVEEEG-----RTFIPPYDDPKVIAGQGTIGLEILEDL-W 174

Query: 174 KVDAFISGIGTGGTVTGAGRFLKENNPDIKVV 205
            VD  I  IG GG + G    LK  NP I ++
Sbjct: 175 DVDTVIVPIGGGGLIAGIAVALKSINPTIHII 206

Length = 333

>gnl|CDD|130194 TIGR01124, ilvA_2Cterm, threonine ammonia-lyase, biosynthetic, long form

 Score = 57.4 bits (139), Expect = 7e-10
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 22/180 (12%)

Query: 33  RIAAKLETMEPCSSVKDRIAYSMI----KDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA 88
           RI  K E ++P  S K R AY+ +     + + +G+I          ++GN   G+AF A
Sbjct: 33  RILIKREDLQPVFSFKLRGAYNKMAQLSPEQKARGVIA--------ASAGNHAQGVAFSA 84

Query: 89  AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLR 148
           A  G   +IVMP T    +   +R  G E++L  +   F++   K  E+ ++    + + 
Sbjct: 85  ARLGLKALIVMPETTPDIKVDAVRGFGGEVVLHGAN--FDDAKAKAIELSQEKGLTF-IH 141

Query: 149 QFENP---ANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVV 205
            F++P   A       T   EI +     +DA    +G GG   G    +K+  P+IKV+
Sbjct: 142 PFDDPLVIAGQG----TLALEILRQVANPLDAVFVPVGGGGLAAGVAALIKQLMPEIKVI 197

This model describes a form of threonine ammonia-lyase, a pyridoxal-phosphate dependent enzyme, with two copies of the threonine dehydratase C-terminal domain (pfam00585). Members with known function participate in isoleucine biosynthesis and are inhibited by isoleucine. Alternate name: threonine deaminase, threonine dehydratase. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain [Amino acid biosynthesis, Pyruvate family]. Length = 499

>gnl|CDD|237111 PRK12483, PRK12483, threonine dehydratase; Reviewed

 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 16/177 (9%)

Query: 33  RIAAKLETMEPCSSVKDRIAYSMIK----DAEDKGLITPGKTTLIEVTSGNTGVGLAFIA 88
           ++  K E ++P  S K R AY+ +     +   +G+IT         ++GN   G+A  A
Sbjct: 53  QVLLKREDLQPVFSFKIRGAYNKMARLPAEQLARGVIT--------ASAGNHAQGVALAA 104

Query: 89  AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLR 148
           A  G   +IVMP T    +   +RA G E++L   +  F + L    + L +      + 
Sbjct: 105 ARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGES--FPDALAHALK-LAEEEGLTFVP 161

Query: 149 QFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVV 205
            F++P +      T   EI +   G +DA    +G GG + G   ++K   P+IKV+
Sbjct: 162 PFDDP-DVIAGQGTVAMEILRQHPGPLDAIFVPVGGGGLIAGIAAYVKYVRPEIKVI 217

Length = 521

>gnl|CDD|233712 TIGR02079, THD1, threonine dehydratase

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 13/208 (6%)

Query: 2   EDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAED 61
           +D  A ++ + E++ +TP+     + +   A I  K E ++P  S K R AY+ +K   D
Sbjct: 1   QDIEAARKRLKEVVPHTPLQLNERLSEKYGANIYLKREDLQPVRSYKIRGAYNFLKQLSD 60

Query: 62  KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE---I 118
             L       ++  ++GN   G A+     G +  + MP+T   ++   ++  G E   I
Sbjct: 61  AQL----AKGVVCASAGNHAQGFAYACRHLGVHGTVFMPATTPKQKIDRVKIFGGEFIEI 116

Query: 119 ILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYE-TTGPEIWQDSGGKVDA 177
           IL      F++      E ++    G  +  F++P    I  + T   EI      K D 
Sbjct: 117 ILVGDT--FDQCAAAAREHVEDH-GGTFIPPFDDPR--IIEGQGTVAAEILDQLPEKPDY 171

Query: 178 FISGIGTGGTVTGAGRFLKENNPDIKVV 205
            +  +G GG ++G   +L   +P  K++
Sbjct: 172 VVVPVGGGGLISGLTTYLAGTSPKTKII 199

This model represents threonine dehydratase, the first step in the pathway converting threonine into isoleucine. At least two other clades of biosynthetic threonine dehydratases have been charcterized (TIGR01124 and TIGR01127). Those sequences described by this model are exclusively found in species containg the rest of the isoleucine pathway and which are generally lacking in members of the those other two clades of threonine dehydratases. Members of this clade are also often gene clustered with other elements of the isoleucine pathway [Amino acid biosynthesis, Pyruvate family]. Length = 409

>gnl|CDD|236417 PRK09224, PRK09224, threonine dehydratase; Reviewed

 Score = 53.6 bits (130), Expect = 1e-08
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 40/189 (21%)

Query: 33  RIAAKLETMEPCSSVKDRIAYSMI----KDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA 88
           ++  K E ++P  S K R AY+ +    ++   +G+IT         ++GN   G+A  A
Sbjct: 36  QVLLKREDLQPVFSFKLRGAYNKMAQLTEEQLARGVIT--------ASAGNHAQGVALSA 87

Query: 89  AARGYNLIIVMPSTC-SMERRIVLRALGAEIILA-DSALRFEEILEKGEEILKKTPDGYL 146
           A  G   +IVMP T   ++   V RA G E++L  DS   F+E      E+ ++  +G  
Sbjct: 88  ARLGIKAVIVMPVTTPDIKVDAV-RAFGGEVVLHGDS---FDEAYAHAIELAEE--EGLT 141

Query: 147 LRQFENPANPKIH-YE---------TTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLK 196
                      IH ++         T   EI Q     +DA    +G GG + G   ++K
Sbjct: 142 F----------IHPFDDPDVIAGQGTIAMEILQQHPHPLDAVFVPVGGGGLIAGVAAYIK 191

Query: 197 ENNPDIKVV 205
           +  P+IKV+
Sbjct: 192 QLRPEIKVI 200

Length = 504

>gnl|CDD|178165 PLN02550, PLN02550, threonine dehydratase

 Score = 51.5 bits (123), Expect = 9e-08
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 24/181 (13%)

Query: 33  RIAAKLETMEPCSSVKDRIAYSMI----KDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA 88
           ++  K E ++P  S K R AY+M+    K+  DKG+I          ++GN   G+A  A
Sbjct: 125 KVLLKREDLQPVFSFKLRGAYNMMAKLPKEQLDKGVICS--------SAGNHAQGVALSA 176

Query: 89  AARGYNLIIVMPSTCSMERRIVLRALGAEIILA----DSALRFEEILEKGEEILKKTPDG 144
              G + +I MP T    +   +  LGA ++L     D A  + +     E      P  
Sbjct: 177 QRLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDSYDEAQAYAKQRALEEGRTFIPP-- 234

Query: 145 YLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKV 204
                F++P +      T G EI +   G + A    +G GG + G   ++K   P++K+
Sbjct: 235 -----FDHP-DVIAGQGTVGMEIVRQHQGPLHAIFVPVGGGGLIAGIAAYVKRVRPEVKI 288

Query: 205 V 205
           +
Sbjct: 289 I 289

Length = 591

>gnl|CDD|235789 PRK06381, PRK06381, threonine synthase; Validated

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 21/165 (12%)

Query: 33  RIAAKLETMEPCSSVKDRIAYSMIKDAEDKGL--ITPGKTTLIEVTSGNTGVGLAFIAAA 90
           +I  K E   P  + KDRIA + ++ A   G   IT G       T GN G  +A+ A  
Sbjct: 32  KIYLKFEGANPTGTQKDRIAEAHVRRAMRLGYSGITVG-------TCGNYGASIAYFARL 84

Query: 91  RGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQF 150
            G   +I +P + S  R   +   GAEII  D    +EE +E+  +  K+  +G      
Sbjct: 85  YGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK--YEEAVERSRKFAKE--NGIY---D 137

Query: 151 ENP--ANPKIHYETTGP---EIWQDSGGKVDAFISGIGTGGTVTG 190
            NP   N  +  E       EI++  G   DA    +G G T+ G
Sbjct: 138 ANPGSVNSVVDIEAYSAIAYEIYEALGDVPDAVAVPVGNGTTLAG 182

Length = 319

>gnl|CDD|180550 PRK06382, PRK06382, threonine dehydratase; Provisional

 Score = 49.9 bits (119), Expect = 2e-07
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 23/205 (11%)

Query: 8   KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIA---YSMIKDAEDK-G 63
           K  +   +  TP+++     D     I  KLE  +   S K R A   +S + + E + G
Sbjct: 16  KSYLEGYLNRTPLIHSTTFGDEYGGDIYFKLENFQKTGSFKSRGAVFKFSKLSEDELRNG 75

Query: 64  LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS 123
           +IT         ++GN   G+A+ A+  G +  IVMP     ++   + A GA +IL   
Sbjct: 76  VIT--------ASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGR 127

Query: 124 ALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYE---TTGPEIWQDSGGKVDAFIS 180
              ++E     ++I          R F    N +       T G EI +D    +D  I 
Sbjct: 128 D--YDEAHRYADKIAMDEN-----RTFIEAFNDRWVISGQGTIGLEIMEDL-PDLDQIIV 179

Query: 181 GIGTGGTVTGAGRFLKENNPDIKVV 205
            +G GG ++G     K  NP++K++
Sbjct: 180 PVGGGGLISGIALAAKHINPNVKII 204

Length = 406

>gnl|CDD|181457 PRK08526, PRK08526, threonine dehydratase; Provisional

 Score = 48.6 bits (116), Expect = 6e-07
 Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)

Query: 8   KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITP 67
           K+ ++  +  TP  Y   +     A +  K E ++   + K R AY+ I +  ++     
Sbjct: 11  KQRISGFVNKTPFAYAPFLSKISGAEVYLKKENLQITGAYKIRGAYNKIANLSEEQ---- 66

Query: 68  GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF 127
            +  +I  ++GN   G+A  A   G   +IVMP    + +    +ALGAE+IL      +
Sbjct: 67  KQHGVIAASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGD--NY 124

Query: 128 EEILEKGEEILKKTPDGYLLRQFENPANPKIHYE------TTGPEIWQDSGGKVDAFISG 181
           +E      E  K+  +   +  FE+        E      T   E+  +    +D  +  
Sbjct: 125 DEAYAFALEYAKEN-NLTFIHPFED-------EEVMAGQGTIALEMLDEIS-DLDMVVVP 175

Query: 182 IGTGGTVTGAGRFLKENNPDIKVV 205
           +G GG ++G     K+ NP+IK++
Sbjct: 176 VGGGGLISGIASAAKQINPNIKII 199

Length = 403

>gnl|CDD|180709 PRK06815, PRK06815, hypothetical protein; Provisional

 Score = 48.5 bits (116), Expect = 6e-07
 Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 25/182 (13%)

Query: 32  ARIAAKLETMEPCSSVKDRIAYSMIK----DAEDKGLITPGKTTLIEVTSGNTGVGLAFI 87
             +  K E ++   S K R A + ++        +G+IT         +SGN G G+A  
Sbjct: 35  CEVYLKCEHLQHTGSFKFRGASNKLRLLNEAQRQQGVIT--------ASSGNHGQGVALA 86

Query: 88  AAARGYNLIIVMPSTCSMERRIVLRALGAEIILA-DSALRFEEILEKGEEILKKTPDGYL 146
           A   G  + +  P   S  +   +RALGAE+ L    AL  E    +  E   K      
Sbjct: 87  AKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGDALNAELAARRAAEQQGKV----- 141

Query: 147 LRQFENPAN-PKI--HYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIK 203
              + +P N P++     T G E+ +     +DA    +G GG ++G   +LK  +P  +
Sbjct: 142 ---YISPYNDPQVIAGQGTIGMELVEQQ-PDLDAVFVAVGGGGLISGIATYLKTLSPKTE 197

Query: 204 VV 205
           ++
Sbjct: 198 II 199

Length = 317

>gnl|CDD|236182 PRK08198, PRK08198, threonine dehydratase; Provisional

 Score = 47.8 bits (115), Expect = 1e-06
 Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 44/204 (21%)

Query: 12  TELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAY----SMIKDAEDKGLITP 67
           +EL G    VYL             K E ++   S K R AY    S+ ++   +G++  
Sbjct: 32  SELTGAE--VYL-------------KCENLQRTGSFKIRGAYNKIASLSEEERARGVVA- 75

Query: 68  GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF 127
                   ++GN   G+A+ A+  G    IVMP T  + +    R+ GAE++L      +
Sbjct: 76  -------ASAGNHAQGVAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGDV--Y 126

Query: 128 EEILEKGEEILKKTPDGYLLRQFENPANPKIHYE------TTGPEIWQDSGGKVDAFISG 181
           +E L K +E+ ++T  G     F +P +     +      T G EI +D    VD  +  
Sbjct: 127 DEALAKAQELAEET--GAT---FVHPFD---DPDVIAGQGTIGLEILED-LPDVDTVVVP 177

Query: 182 IGTGGTVTGAGRFLKENNPDIKVV 205
           IG GG ++G    +K   P+++V+
Sbjct: 178 IGGGGLISGVATAVKALRPEVRVI 201

Length = 404

>gnl|CDD|235842 PRK06608, PRK06608, threonine dehydratase; Provisional

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 25/194 (12%)

Query: 4   NNAIKRDVTELIGNTPMVY---LNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           +N IK+ +      TP+V+   LN ++      I  K+E+++   + K R   + + + +
Sbjct: 14  HNRIKQYLHL----TPIVHSESLNEMLG---HEIFFKVESLQKTGAFKVRGVLNHLLELK 66

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
           ++G + P K  ++  ++GN G  +A+ +   G    I +P   S  ++      G E+IL
Sbjct: 67  EQGKL-PDK--IVAYSTGNHGQAVAYASKLFGIKTRIYLPLNTSKVKQQAALYYGGEVIL 123

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENP---ANPKIHYETTGPEIWQDSGGKVDA 177
            ++    EE  ++ EE        Y +   ++    A       T   E  Q  G   DA
Sbjct: 124 TNTRQEAEEKAKEDEE-----QGFYYIHPSDSDSTIAGAG----TLCYEALQQLGFSPDA 174

Query: 178 FISGIGTGGTVTGA 191
             +  G GG ++G 
Sbjct: 175 IFASCGGGGLISGT 188

Length = 338

>gnl|CDD|223572 COG0498, ThrC, Threonine synthase [Amino acid transport and metabolism]

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 23/167 (13%)

Query: 33  RIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARG 92
            +  K     P  S KDR    ++  A++ G       T++  +SGNTG   A  AA  G
Sbjct: 95  NLYVKELGHNPTGSFKDRGMTVLVSLAKELG-----AKTILCASSGNTGASAAAYAARAG 149

Query: 93  YNLIIVMPSTC-SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFE 151
             + ++ P    S  +   +  LGA +I  D    F++  E  +E   +      +    
Sbjct: 150 LKVFVLYPKGKVSPGKLAQMLTLGAHVIAVDG--NFDDAQELVKEAANREGLLSAV---- 203

Query: 152 NPANP------KIHYETTGPEIWQDSGGKV-DAFISGIGTGGTVTGA 191
           N  NP      K +      EI +  G K  D  +  +G GG +   
Sbjct: 204 NSINPYRLEGQKTYAF----EIAEQLGWKAPDHVVVPVGNGGNLLAI 246

Length = 411

>gnl|CDD|180565 PRK06450, PRK06450, threonine synthase; Validated

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 13/113 (11%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           IK  ++   G TP++   N+          KL+ + P  S KDR + ++I    +KG+  
Sbjct: 48  IKHFISLGEGRTPLIKKGNI--------WFKLDFLNPTGSYKDRGSVTLISYLAEKGI-- 97

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119
                + E +SGN G  +A   AA G  + I +P T S  +   + + GAE++
Sbjct: 98  ---KQISEDSSGNAGASIAAYGAAAGIEVKIFVPETASGGKLKQIESYGAEVV 147

Length = 338

>gnl|CDD|136018 PRK06721, PRK06721, threonine synthase; Reviewed

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 8/134 (5%)

Query: 10  DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGK 69
           DV+ + GNTP++ L N+      ++  K E   P  S KDR     +  A+++     G 
Sbjct: 21  DVSLMEGNTPLIPLLNISKQLGIQLYGKYEGANPTGSFKDRGMVMAVAKAKEE-----GS 75

Query: 70  TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIILADSALRFE 128
             +I  ++GNT    A  AA  G   IIV+P       ++    A GAEII  +    F+
Sbjct: 76  EAIICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEG--NFD 133

Query: 129 EILEKGEEILKKTP 142
           + L+    I  + P
Sbjct: 134 DALKAVRNIAAEEP 147

Length = 352

>gnl|CDD|235539 PRK05638, PRK05638, threonine synthase; Validated

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 9/111 (8%)

Query: 37  KLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLI 96
           K ET  P  S +DR+A   +                I  + GN    +A  +A  G    
Sbjct: 85  KDETRNPTGSFRDRLATVAVSYGLPYA-----ANGFIVASDGNAAASVAAYSARAGKEAF 139

Query: 97  IVMPSTCSMERRIVLRALGAEIILA----DSALRFEEILEKGEEILKKTPD 143
           +V+P      + I + A GA+II      D A+ + E L +   +   TP+
Sbjct: 140 VVVPRKVDKGKLIQMIAFGAKIIRYGESVDEAIEYAEELARLNGLYNVTPE 190

Length = 442

>gnl|CDD|235699 PRK06110, PRK06110, hypothetical protein; Provisional

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 22/53 (41%), Positives = 29/53 (54%)

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119
           P    +I  T GN G  +AF A   G    IV+P   S+E+   +RALGAE+I
Sbjct: 68  PRVRGVISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELI 120

Length = 322

>gnl|CDD|234245 TIGR03528, 2_3_DAP_am_ly, diaminopropionate ammonia-lyase

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 68  GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA----DS 123
           G  T +  T GN G G+A+ A   G   ++ MP   + ER   +RA GAE  +     D 
Sbjct: 112 GDITFVTATDGNHGRGVAWAANQLGQKSVVYMPKGSAQERLENIRAEGAECTITDLNYDD 171

Query: 124 ALRF--EEILEKGEEILKKTP-DGY 145
           A+R   +   E G  +++ T  +GY
Sbjct: 172 AVRLAWKMAQENGWVMVQDTAWEGY 196

Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate. Length = 396

>gnl|CDD|132036 TIGR02991, ectoine_eutB, ectoine utilization protein EutB

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 18/207 (8%)

Query: 5   NAIKRDVTELIGN---TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIK--DA 59
             I+R    + G    TP+V   ++ + C   +  KLE  +   S K R A + +     
Sbjct: 4   QDIERAAARISGRVEETPLVESPSLSELCGVPVHLKLEHRQTTGSFKLRGATNAVLSLSD 63

Query: 60  EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI- 118
             +         ++  ++GN G  LA+ AA  G    I M       +   +R LGAE+ 
Sbjct: 64  TQRAA------GVVAASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVR 117

Query: 119 ILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAF 178
           I+  S    +E +E+    L       +L  F++P        T G E+ +     +   
Sbjct: 118 IVGRSQDDAQEEVER----LVADRGLTMLPPFDHPDIVAGQ-GTLGLEVVEQM-PDLATV 171

Query: 179 ISGIGTGGTVTGAGRFLKENNPDIKVV 205
           +  +  GG  +G    +K   PD +V+
Sbjct: 172 LVPLSGGGLASGVAMAVKAARPDTRVI 198

Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases. Length = 317

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 10/84 (11%)

Query: 52  AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI--AAARGYNLIIVMPSTCSMERRI 109
           A+  +    D+  + PG+T L  V     GVG A I  A A G  ++ V     S E+  
Sbjct: 130 AWLAL---FDRAGLKPGETVL--VHGAAGGVGSAAIQLAKALGATVVAV---VSSSEKLE 181

Query: 110 VLRALGAEIILADSALRFEEILEK 133
           +L+ LGA+ ++      F E + +
Sbjct: 182 LLKELGADHVINYREEDFVEQVRE 205

Length = 326

>gnl|CDD|107209 cd06448, L-Ser-dehyd, Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 15/181 (8%)

Query: 32  ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR 91
             +  KLE ++P  S K R    + + +  +GL       ++  + GN G+  A+  AAR
Sbjct: 16  CNVFLKLENLQPSGSFKIRGIGHLCQKSAKQGL--NECVHVVCSSGGNAGLAAAY--AAR 71

Query: 92  GYNL--IIVMPSTCSMERRIV--LRALGAEIILADSALRFEEILEKGEEILKKTPDGYLL 147
              +   IV+P +   + R+V  LR  GA +++      +E      EE+ +  P    +
Sbjct: 72  KLGVPCTIVVPES--TKPRVVEKLRDEGATVVVHGKVW-WEADNYLREELAENDPGPVYV 128

Query: 148 RQFENPANPKIHYETTGPEIWQD--SGGKVDAFISGIGTGGTVTGAGRFLKENNP-DIKV 204
             F++P   + H  +   EI Q   S  KVDA +  +G GG + G  + L+ N   DI V
Sbjct: 129 HPFDDPLIWEGH-SSMVDEIAQQLQSQEKVDAIVCSVGGGGLLNGIVQGLERNGWGDIPV 187

Query: 205 V 205
           V
Sbjct: 188 V 188

Length = 316

>gnl|CDD|130808 TIGR01747, diampropi_NH3ly, diaminopropionate ammonia-lyase family

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 11/87 (12%)

Query: 68  GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF 127
           G+ T    T GN G G+A+ A   G   ++ MP   + ER   +  LGAE  + D  + +
Sbjct: 93  GQATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITD--MNY 150

Query: 128 EEIL--------EKGEEILKKTP-DGY 145
           ++ +        + G  +++ T  +GY
Sbjct: 151 DDTVRLAMQMAQQHGWVVVQDTAWEGY 177

This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase) [Energy metabolism, Other]. Length = 376

>gnl|CDD|180539 PRK06352, PRK06352, threonine synthase; Validated

 Score = 39.7 bits (92), Expect = 6e-04
 Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 25/192 (13%)

Query: 16  GNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEV 75
           GNTP++ L N+       +  K E + P  S KDR     +  A+++     G   +I  
Sbjct: 27  GNTPLIPLPNLSKELGVTLYGKYEGLNPTGSFKDRGMVMAVAKAKEE-----GAEAVICA 81

Query: 76  TSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRAL------GAEIILADSALRFEE 129
           ++GNT    A  A   G    IV+P     E ++ L  L      GA+II       F+E
Sbjct: 82  STGNTSAAAAAYATRAGLKAYIVIP-----EGKVALGKLAQAVMYGADIISIQG--NFDE 134

Query: 130 ILEKGEEILKKTPDGYLLRQFENPANP-KIHYETTGP-EIWQDSGGKVDAFISGIGTGGT 187
            L+   E+ +      +     N  NP ++  + T   EI +  G   D     +G  G 
Sbjct: 135 ALKSVRELAETEAVTLV-----NSVNPYRLEGQKTAAFEICEQLGSAPDVLAIPVGNAGN 189

Query: 188 VTGAGRFLKENN 199
           ++   +  KE N
Sbjct: 190 ISAYWKGFKEWN 201

Length = 351

>gnl|CDD|236186 PRK08206, PRK08206, diaminopropionate ammonia-lyase; Provisional

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 24/55 (43%), Positives = 29/55 (52%)

Query: 68  GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
           G  T    T GN G G+A+ A   G   +I MP   S ER   +RALGAE I+ D
Sbjct: 115 GDITFATATDGNHGRGVAWAAQQLGQKAVIYMPKGSSEERVDAIRALGAECIITD 169

Length = 399

>gnl|CDD|236244 PRK08329, PRK08329, threonine synthase; Validated

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 37  KLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLI 96
           KL+ ++P  S KDR  Y  +   +++G+       +I+ +SGN  + LA  + + G  + 
Sbjct: 77  KLDYLQPTGSFKDRGTYVTVAKLKEEGI----NEVVID-SSGNAALSLALYSLSEGIKVH 131

Query: 97  IVMPSTCSMERRIVLRALGAEI 118
           + +    S E+  +L  LGAE+
Sbjct: 132 VFVSYNASKEKISLLSRLGAEL 153

Length = 347

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 18/108 (16%)

Query: 40  TMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI--AAARGYNLII 97
           ++ PC+      AY +++D        PG    +     N+ VG A I  A   G   I 
Sbjct: 128 SVNPCT------AYRLLEDFVKLQ---PGDW--VIQNGANSAVGQAVIQLAKLLGIKTIN 176

Query: 98  VM---PSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTP 142
           V+   P    ++ R  L+ALGA+ +L +  LR     E  +      P
Sbjct: 177 VVRDRPDLEELKER--LKALGADHVLTEEELRSLLATELLKSAPGGRP 222

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 36.8 bits (86), Expect = 0.004
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 3/75 (4%)

Query: 65  ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124
           + PG T LI    G + VGLA +  A+      V  +T S ER  +L+ LGA+ ++ D  
Sbjct: 140 LQPGDTLLIR--GGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVIDDG 196

Query: 125 LRFEEILEKGEEILK 139
              E++        K
Sbjct: 197 AIAEQLRAAPGGFDK 211

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	210
PLN03013	429	cysteine synthase	100.0
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	100.0
PLN02565	322	cysteine synthase	100.0
PRK11761	296	cysM cysteine synthase B; Provisional	100.0
PLN00011	323	cysteine synthase	100.0
PLN02556	368	cysteine synthase/L-3-cyanoalanine synthase	100.0
TIGR01138	290	cysM cysteine synthase B. Alternate name: O-acetyl	100.0
TIGR01136	299	cysKM cysteine synthases. This model discriminates	100.0
COG1171	347	IlvA Threonine dehydratase [Amino acid transport a	100.0
TIGR01139	298	cysK cysteine synthase A. This model distinguishes	100.0
PRK10717	330	cysteine synthase A; Provisional	100.0
PRK07476	322	eutB threonine dehydratase; Provisional	100.0
PRK08526	403	threonine dehydratase; Provisional	100.0
PRK08198	404	threonine dehydratase; Provisional	100.0
PLN02970	328	serine racemase	100.0
PLN02356	423	phosphateglycerate kinase	100.0
PRK06382	406	threonine dehydratase; Provisional	100.0
cd01561	291	CBS_like CBS_like: This subgroup includes Cystathi	100.0
KOG1252	362	consensus Cystathionine beta-synthase and related	100.0
TIGR02991	317	ectoine_eutB ectoine utilization protein EutB. Mem	100.0
PRK12483	521	threonine dehydratase; Reviewed	100.0
PRK08638	333	threonine dehydratase; Validated	100.0
PRK07048	321	serine/threonine dehydratase; Validated	100.0
TIGR01137	454	cysta_beta cystathionine beta-synthase. Members of	100.0
TIGR02079	409	THD1 threonine dehydratase. This model represents	100.0
PRK06110	322	hypothetical protein; Provisional	100.0
cd06447	404	D-Ser-dehyd D-Serine dehydratase is a pyridoxal ph	100.0
PRK08639	420	threonine dehydratase; Validated	100.0
PLN02550	591	threonine dehydratase	100.0
PRK06608	338	threonine dehydratase; Provisional	100.0
KOG1250	457	consensus Threonine/serine dehydratases [Amino aci	100.0
cd01562	304	Thr-dehyd Threonine dehydratase: The first step in	100.0
PRK07334	403	threonine dehydratase; Provisional	100.0
PRK06815	317	hypothetical protein; Provisional	100.0
TIGR01124	499	ilvA_2Cterm threonine ammonia-lyase, biosynthetic,	100.0
TIGR01127	380	ilvA_1Cterm threonine dehydratase, medium form. A	100.0
cd06448	316	L-Ser-dehyd Serine dehydratase is a pyridoxal phos	100.0
PRK06381	319	threonine synthase; Validated	100.0
PRK02991	441	D-serine dehydratase; Provisional	100.0
PRK09224	504	threonine dehydratase; Reviewed	100.0
PRK08813	349	threonine dehydratase; Provisional	100.0
TIGR02035	431	D_Ser_am_lyase D-serine ammonia-lyase. This family	100.0
PRK08246	310	threonine dehydratase; Provisional	100.0
PRK06352	351	threonine synthase; Validated	100.0
cd01563	324	Thr-synth_1 Threonine synthase is a pyridoxal phos	100.0
PRK08197	394	threonine synthase; Validated	100.0
cd00640	244	Trp-synth-beta_II Tryptophan synthase beta superfa	100.0
PRK07591	421	threonine synthase; Validated	100.0
PRK07409	353	threonine synthase; Validated	100.0
KOG1251	323	consensus Serine racemase [Signal transduction mec	100.0
PRK06721	352	threonine synthase; Reviewed	100.0
PRK05638	442	threonine synthase; Validated	100.0
PRK06450	338	threonine synthase; Validated	100.0
PRK06260	397	threonine synthase; Validated	100.0
PLN02569	484	threonine synthase	100.0
PRK08329	347	threonine synthase; Validated	100.0
PRK08206	399	diaminopropionate ammonia-lyase; Provisional	100.0
TIGR01747	376	diampropi_NH3ly diaminopropionate ammonia-lyase fa	100.0
TIGR01275	311	ACC_deam_rel pyridoxal phosphate-dependent enzymes	100.0
TIGR00260	328	thrC threonine synthase. Involved in threonine bio	100.0
TIGR03528	396	2_3_DAP_am_ly diaminopropionate ammonia-lyase. Mem	100.0
PRK03910	331	D-cysteine desulfhydrase; Validated	100.0
PRK14045	329	1-aminocyclopropane-1-carboxylate deaminase; Provi	100.0
KOG1481	391	consensus Cysteine synthase [Amino acid transport	100.0
TIGR00263	385	trpB tryptophan synthase, beta subunit. Tryptophan	100.0
PRK13028	402	tryptophan synthase subunit beta; Provisional	100.0
PRK04346	397	tryptophan synthase subunit beta; Validated	100.0
PRK13802	695	bifunctional indole-3-glycerol phosphate synthase/	100.0
PLN02618	410	tryptophan synthase, beta chain	100.0
PF00291	306	PALP: Pyridoxal-phosphate dependent enzyme; InterP	100.0
cd06446	365	Trp-synth_B Tryptophan synthase-beta: Trptophan sy	100.0
cd06449	307	ACCD Aminocyclopropane-1-carboxylate deaminase (AC	100.0
TIGR01415	419	trpB_rel pyridoxal-phosphate dependent TrpB-like e	100.0
PRK12390	337	1-aminocyclopropane-1-carboxylate deaminase; Provi	100.0
TIGR01274	337	ACC_deam 1-aminocyclopropane-1-carboxylate deamina	100.0
PRK12391	427	tryptophan synthase subunit beta; Reviewed	100.0
PRK13803	610	bifunctional phosphoribosylanthranilate isomerase/	100.0
TIGR03844	398	cysteate_syn cysteate synthase. Members of this fa	100.0
COG0498	411	ThrC Threonine synthase [Amino acid transport and	100.0
COG0133	396	TrpB Tryptophan synthase beta chain [Amino acid tr	99.96
COG2515	323	Acd 1-aminocyclopropane-1-carboxylate deaminase [A	99.96
PRK09225	462	threonine synthase; Validated	99.93
cd01560	460	Thr-synth_2 Threonine synthase catalyzes the final	99.92
COG1350	432	Predicted alternative tryptophan synthase beta-sub	99.92
KOG1395	477	consensus Tryptophan synthase beta chain [Amino ac	99.91
COG3048	443	DsdA D-serine dehydratase [Amino acid transport an	99.8
PF03808	172	Glyco_tran_WecB: Glycosyl transferase WecB/TagA/Cp	93.68
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.67
PRK12743	256	oxidoreductase; Provisional	92.46
PRK05993	277	short chain dehydrogenase; Provisional	92.45
PRK03562	621	glutathione-regulated potassium-efflux system prot	92.2
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	91.89
PRK08628	258	short chain dehydrogenase; Provisional	91.65
TIGR01064	473	pyruv_kin pyruvate kinase. This enzyme is a homote	91.42
PRK08226	263	short chain dehydrogenase; Provisional	91.38
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	91.07
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	91.05
cd06533	171	Glyco_transf_WecG_TagA The glycosyltransferase Wec	90.92
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	90.89
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	90.8
PRK06182	273	short chain dehydrogenase; Validated	90.79
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	90.77
PRK08862	227	short chain dehydrogenase; Provisional	90.7
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	90.6
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	90.57
PF00764	388	Arginosuc_synth: Arginosuccinate synthase; InterPr	90.56
PRK10669	558	putative cation:proton antiport protein; Provision	90.43
PRK03659	601	glutathione-regulated potassium-efflux system prot	90.4
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	90.34
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	90.19
PRK06139	330	short chain dehydrogenase; Provisional	90.17
PRK08589	272	short chain dehydrogenase; Validated	89.94
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	89.92
PRK07478	254	short chain dehydrogenase; Provisional	89.65
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	89.62
PRK07523	255	gluconate 5-dehydrogenase; Provisional	89.39
PRK08643	256	acetoin reductase; Validated	89.36
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	89.12
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	89.07
PRK05866	293	short chain dehydrogenase; Provisional	89.06
PRK07097	265	gluconate 5-dehydrogenase; Provisional	88.7
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	88.69
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	88.31
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	88.29
PRK08278	273	short chain dehydrogenase; Provisional	88.18
PRK12937	245	short chain dehydrogenase; Provisional	88.17
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	88.11
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	88.07
PRK12935	247	acetoacetyl-CoA reductase; Provisional	88.02
PRK08277	278	D-mannonate oxidoreductase; Provisional	88.0
PRK08703	239	short chain dehydrogenase; Provisional	87.89
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	87.68
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	87.49
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	87.48
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	87.44
PRK06194	287	hypothetical protein; Provisional	87.43
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	87.24
PRK06701	290	short chain dehydrogenase; Provisional	87.14
PRK12938	246	acetyacetyl-CoA reductase; Provisional	87.13
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	86.88
PRK06181	263	short chain dehydrogenase; Provisional	86.62
PRK15408	336	autoinducer 2-binding protein lsrB; Provisional	86.55
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	86.51
PRK06138	252	short chain dehydrogenase; Provisional	86.44
COG0300	265	DltE Short-chain dehydrogenases of various substra	86.4
PRK08303	305	short chain dehydrogenase; Provisional	86.25
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	86.17
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	86.17
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	86.09
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	85.9
PRK05867	253	short chain dehydrogenase; Provisional	85.89
PRK06841	255	short chain dehydrogenase; Provisional	85.87
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	85.84
PRK07791	286	short chain dehydrogenase; Provisional	85.8
TIGR00696	177	wecB_tagA_cpsF bacterial polymer biosynthesis prot	85.76
PRK07062	265	short chain dehydrogenase; Provisional	85.7
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	85.66
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	85.45
PRK08340	259	glucose-1-dehydrogenase; Provisional	85.41
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	85.21
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	85.18
PRK07774	250	short chain dehydrogenase; Provisional	85.02
PRK06947	248	glucose-1-dehydrogenase; Provisional	84.96
PRK08085	254	gluconate 5-dehydrogenase; Provisional	84.94
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	84.85
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	84.65
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	84.65
TIGR00670	301	asp_carb_tr aspartate carbamoyltransferase. Ornith	84.64
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	84.52
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	84.51
PRK05650	270	short chain dehydrogenase; Provisional	84.49
PRK08265	261	short chain dehydrogenase; Provisional	84.46
PRK06483	236	dihydromonapterin reductase; Provisional	84.19
PRK08936	261	glucose-1-dehydrogenase; Provisional	84.08
TIGR02415	254	23BDH acetoin reductases. One member of this famil	84.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	83.68
COG2130	340	Putative NADP-dependent oxidoreductases [General f	83.61
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	83.56
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	83.49
PF09837	122	DUF2064: Uncharacterized protein conserved in bact	83.05
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	82.87
PRK05872	296	short chain dehydrogenase; Provisional	82.61
PRK05693	274	short chain dehydrogenase; Provisional	82.54
COG1751	186	Uncharacterized conserved protein [Function unknow	82.5
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	82.48
PRK06720	169	hypothetical protein; Provisional	82.4
PRK06197	306	short chain dehydrogenase; Provisional	82.36
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	82.35
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	82.31
COG0800	211	Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Ca	82.28
PRK05826	465	pyruvate kinase; Provisional	82.25
PRK10538	248	malonic semialdehyde reductase; Provisional	82.17
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	81.88
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	81.58
PRK07326	237	short chain dehydrogenase; Provisional	81.4
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	81.31
PRK07109	334	short chain dehydrogenase; Provisional	81.27
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	81.2
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	81.12
PRK05717	255	oxidoreductase; Validated	81.07
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	81.05
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	80.86
PRK10537	393	voltage-gated potassium channel; Provisional	80.78
PTZ00354	334	alcohol dehydrogenase; Provisional	80.76
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	80.74
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	80.27

>PLN03013 cysteine synthase

Probab=100.00  E-value=2.5e-53  Score=368.07  Aligned_cols=204  Identities=65%  Similarity=1.104  Sum_probs=192.1

Q ss_pred             hhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA   85 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA   85 (210)
                      .+++++.+.+++|||++++.++...+.+||+|+|++|||||||||++.+++..++++|.+.+|+.+||++|+||||+|+|
T Consensus       112 ~~~~~i~~~iG~TPLv~l~~l~~~~g~~Iy~KlE~lNPtGSfKdR~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA  191 (429)
T PLN03013        112 NIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLA  191 (429)
T ss_pred             HHHHHHHhcCCCCCeEECcccccccCCeEEEEeccCCCccccHHHHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHH
Confidence            46788999999999999999887777899999999999999999999999999999999999877899999999999999


Q ss_pred             HHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHH
Q 028372           86 FIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGP  165 (210)
Q Consensus        86 ~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  165 (210)
                      ++|+.+|+++++|||+++++.|+++|+.+||+|+.+++...++++.+.+++++++.+++||++||+|+.|+..||.|+|+
T Consensus       192 ~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~~~~~~a~~~A~ela~~~~g~~~~~qy~Np~n~~ah~~ttg~  271 (429)
T PLN03013        192 FIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGP  271 (429)
T ss_pred             HHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhhcCCeEeCCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999987656778889999998887689999999999997789999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       166 Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ||++|++++||+||+|+||||+++|++++||+.+|+++||+|..
T Consensus       272 EI~eq~~~~~D~vV~~vGtGGtisGiar~lKe~~P~vkVigVep  315 (429)
T PLN03013        272 EIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEP  315 (429)
T ss_pred             HHHHhcCCCCCEEEEeCCccHHHHHHHHHHHhhCCCCEEEEEEe
Confidence            99999977899999999999999999999999999999999863

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.7e-53  Score=351.61  Aligned_cols=200  Identities=56%  Similarity=0.920  Sum_probs=190.0

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      ++.+.+.+++|||+++.++....+++||+|+|++||+||.|||.+.+|+.+|+++|.++|| .+||++||||+|.+||+.
T Consensus         2 ~~~~~~~iG~TPlvrL~~~~~~~~~~i~~KlE~~NP~gSvKDR~A~~mI~~Ae~~G~l~pG-~tIVE~TSGNTGI~LA~v   80 (300)
T COG0031           2 YESILDLIGNTPLVRLNRLSPGTGVEIYAKLESFNPGGSVKDRIALYMIEDAEKRGLLKPG-GTIVEATSGNTGIALAMV   80 (300)
T ss_pred             ccchHHHhCCCCcEeecccCCCCCceEEEEhhhcCCCCchhHHHHHHHHHHHHHcCCCCCC-CEEEEcCCChHHHHHHHH
Confidence            3567888999999999999888789999999999999999999999999999999999999 579999999999999999


Q ss_pred             HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCC-HHHHHHHHHHHHHhCCC-eEEcCCCCCChhHHHHHHhHHH
Q 028372           88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR-FEEILEKGEEILKKTPD-GYLLRQFENPANPKIHYETTGP  165 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~-~~~~~~~a~~~~~~~~~-~~~~~~~~n~~~~~~g~~t~~~  165 (210)
                      |+.+|+++++|||++++.+|++.|+.|||+|+.++...+ +..+.+++++++++.|+ .+|.+||+||+||.+||.|++.
T Consensus        81 aa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~~p~~~~~~~Qf~NpaN~~aH~~tT~~  160 (300)
T COG0031          81 AAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAAEIPGYAVWLNQFENPANPEAHYETTGP  160 (300)
T ss_pred             HHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHhCCCceEchhhcCCCccHHHHHhhhHH
Confidence            999999999999999999999999999999999998444 88899999999999988 7788899999999999999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       166 Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      ||++|+++++|++|+++|||||++|++++||+.+|++++|+|-
T Consensus       161 EI~~~~~g~~d~fVagvGTGGTitGvar~Lk~~~p~i~iv~vd  203 (300)
T COG0031         161 EIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIVAVD  203 (300)
T ss_pred             HHHHHhCCCCCEEEEeCCcchhHHHHHHHHHhhCCCcEEEEEC
Confidence            9999998889999999999999999999999999999999984

>PLN02565 cysteine synthase

Probab=100.00  E-value=4.7e-53  Score=358.42  Aligned_cols=202  Identities=72%  Similarity=1.173  Sum_probs=188.2

Q ss_pred             hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      ..+.+.+.+++|||++++.++...+.+||+|+|++|||||||+|++.+++..+.++|.+.+|.+.||++|+||||+|+|+
T Consensus         5 ~~~~~~~~ig~TPLv~l~~l~~~~~~~i~~K~E~~nPtGSfKdR~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~   84 (322)
T PLN02565          5 IAKDVTELIGKTPLVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAF   84 (322)
T ss_pred             hhhhHHHHhCCCceEEccccCCCCCceEEEEecccCCccchHHHHHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHH
Confidence            45678899999999999887666667999999999999999999999999999999988888778999999999999999


Q ss_pred             HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372           87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE  166 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  166 (210)
                      +|+.+|++|++|||+++++.|+++|+.+||+|+.++...+++++.+.+++++++.+++||++||+|+.|+..||.|+|+|
T Consensus        85 ~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~q~~n~~n~~~~~~t~a~E  164 (322)
T PLN02565         85 MAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPAKGMKGAVQKAEEILAKTPNSYILQQFENPANPKIHYETTGPE  164 (322)
T ss_pred             HHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCCCcEeecccCCHhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999875556788889999988876889999999999988899999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       167 i~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      |++|+++.||+||+|+|+||+++|++.+||+.+|++|||+|.
T Consensus       165 i~~q~~~~~d~vv~~vG~GG~l~Gi~~~lk~~~p~~kvi~Ve  206 (322)
T PLN02565        165 IWKGTGGKVDAFVSGIGTGGTITGAGKYLKEQNPDIKLYGVE  206 (322)
T ss_pred             HHHhcCCCCCEEEEcCCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence            999997679999999999999999999999999999999985

>PRK11761 cysM cysteine synthase B; Provisional

Probab=100.00  E-value=2.8e-52  Score=350.34  Aligned_cols=200  Identities=46%  Similarity=0.732  Sum_probs=186.9

Q ss_pred             hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      .++++.+.+++|||+++++++...|.+||+|+|++|||||||+|++.+++.++.++|.+.++ .+|+++|+||||+|+|+
T Consensus         2 ~~~~i~~~~g~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~~~~a~~~g~~~~g-~~vv~aSsGN~g~alA~   80 (296)
T PRK11761          2 AYPTLEDTIGNTPLVKLQRLPPDRGNTILAKLEGNNPAGSVKDRPALSMIVQAEKRGEIKPG-DTLIEATSGNTGIALAM   80 (296)
T ss_pred             ccccHHHhcCCCceEeccccccCCCCEEEEEEcccCCCCCchhHHHHHHHHHHHHcCCCCCC-CEEEEeCCChHHHHHHH
Confidence            45778889999999999999887788999999999999999999999999999999987776 56999999999999999


Q ss_pred             HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372           87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE  166 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  166 (210)
                      +|+.+|++|++|+|+++++.|++.|+.+||+|+.++...+++++.+.+++++++. +++|++||+|+.++..||.|+++|
T Consensus        81 ~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~~~~t~~~E  159 (296)
T PRK11761         81 IAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPKEQGMEGARDLALQMQAEG-EGKVLDQFANPDNPLAHYETTGPE  159 (296)
T ss_pred             HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHhcc-CCEecCCCCChhhHHHHhhchHHH
Confidence            9999999999999999999999999999999999997556888888899988876 789999999999988899999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       167 i~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      |++|+++.+|+||+|+||||+++|++++||+.+|+++||+|.
T Consensus       160 i~eq~~~~~d~iv~~vG~Gg~~~Gi~~~lk~~~~~~kvigVe  201 (296)
T PRK11761        160 IWRQTEGRITHFVSSMGTTGTIMGVSRYLKEQNPAVQIVGLQ  201 (296)
T ss_pred             HHHhcCCCCCEEEecCCcHHHHHHHHHHHHHhCCCCEEEEEe
Confidence            999997679999999999999999999999999999999985

>PLN00011 cysteine synthase

Probab=100.00  E-value=8.3e-52  Score=351.38  Aligned_cols=209  Identities=74%  Similarity=1.162  Sum_probs=193.0

Q ss_pred             CCchhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCch
Q 028372            1 MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNT   80 (210)
Q Consensus         1 ~~~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~   80 (210)
                      |++-...++.+.+.+++|||+++++++...+.+||+|+|++|||||||+|++.+++..+.++|.+.|+.++||++|+|||
T Consensus         1 ~~~~~~~~~~~~~~~g~TPl~~l~~l~~~~g~~i~~K~E~~nPtGS~K~R~a~~~l~~a~~~g~~~~g~~~vv~aSsGN~   80 (323)
T PLN00011          1 MEDRCLIKNDVTELIGNTPMVYLNNIVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGLITPGKSTLIEATAGNT   80 (323)
T ss_pred             CcchhhHHhhHHHHhCCCceEEccccCCCCCceEEEEecccCCccccchHHHHHHHHHHHHcCCCCCCCcEEEEeCCChH
Confidence            67777788889999999999999998866667999999999999999999999999999999999888778999999999


Q ss_pred             HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHH
Q 028372           81 GVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHY  160 (210)
Q Consensus        81 g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~  160 (210)
                      |+|+|++|+.+|++|++|+|+++++.|+++++.+||+|+.++.+...++..+.+++++++.++++|++||+|+.++..||
T Consensus        81 g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~n~~~~~  160 (323)
T PLN00011         81 GIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQSIGLKGMLEKAEEILSKTPGGYIPQQFENPANPEIHY  160 (323)
T ss_pred             HHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCeEEeccccCCccHHHHH
Confidence            99999999999999999999999999999999999999999975445566778888888766789999999999987899


Q ss_pred             HhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          161 ETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       161 ~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      .++++||++|+++.||+||+|+|||||++|++++||+.+|+++||||..
T Consensus       161 ~t~~~EI~~q~~~~~D~iv~~vGtGGt~aGi~~~lk~~~~~~kvigVe~  209 (323)
T PLN00011        161 RTTGPEIWRDSAGKVDILVAGVGTGGTATGVGKFLKEKNKDIKVCVVEP  209 (323)
T ss_pred             HHHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHhhCCCCEEEEEec
Confidence            9999999999966899999999999999999999999999999999964

>PLN02556 cysteine synthase/L-3-cyanoalanine synthase

Probab=100.00  E-value=6.2e-52  Score=356.61  Aligned_cols=204  Identities=55%  Similarity=0.943  Sum_probs=190.1

Q ss_pred             hhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA   85 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA   85 (210)
                      ++.+++.+.+++|||+++++++...|++||+|+|++|||||||+|++.+++.+++++|.+.||+++||++|+||||+|+|
T Consensus        48 ~~~~~v~~~ig~TPl~~l~~l~~~~g~~I~~KlE~~nPtGS~KdR~A~~~l~~a~~~G~i~pG~~~vV~aSsGN~G~alA  127 (368)
T PLN02556         48 KIKTDASQLIGKTPLVYLNKVTEGCGAYIAAKQEMFQPTSSIKDRPALAMIEDAEKKNLITPGKTTLIEPTSGNMGISLA  127 (368)
T ss_pred             hhhhhHHHhcCCCccEEccccccccCCEEEEEecccCCccchHHHHHHHHHHHHHHcCCcCCCCCEEEEeCCchHHHHHH
Confidence            35678899999999999999987778999999999999999999999999999999999999988899999999999999


Q ss_pred             HHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHH
Q 028372           86 FIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGP  165 (210)
Q Consensus        86 ~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  165 (210)
                      ++|+.+|++|++|+|+.++..|++.|+.+||+|+.++...+....++.+++++++.++++|++||+|+.++..||.++++
T Consensus       128 ~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~~~~~~~~~~q~~np~~~~~g~~ttg~  207 (368)
T PLN02556        128 FMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLESTPDAFMLQQFSNPANTQVHFETTGP  207 (368)
T ss_pred             HHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHHhcCCCCccCCCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999986444557778888888888789999999999997679999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       166 Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ||++|+.+.+|+||+|+|||||++|++++||+.+|+++||||..
T Consensus       208 EI~eq~~~~~D~vV~~vGtGGt~aGv~~~lk~~~p~~kVigVep  251 (368)
T PLN02556        208 EIWEDTLGQVDIFVMGIGSGGTVSGVGKYLKSKNPNVKIYGVEP  251 (368)
T ss_pred             HHHHhcCCCCCEEEEcCCcchHHHHHHHHHHHhCCCCEEEEEee
Confidence            99999866899999999999999999999999999999999964

>TIGR01138 cysM cysteine synthase B

Probab=100.00  E-value=2.8e-51  Score=343.41  Aligned_cols=196  Identities=46%  Similarity=0.756  Sum_probs=182.7

Q ss_pred             hhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028372           11 VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAA   90 (210)
Q Consensus        11 i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~   90 (210)
                      |.+.+++|||+++++++...|.+||+|+|++|||||||+|++.+++..+.++|.+.++ ++|+++|+||||+|+|++|+.
T Consensus         2 i~~~ig~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~v~~a~~~g~~~~g-~~vv~aSsGN~g~alA~~a~~   80 (290)
T TIGR01138         2 IEQTVGNTPLVRLQRMGPENGSEVWLKLEGNNPAGSVKDRPALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIAAL   80 (290)
T ss_pred             hHHhCCCCceEEccccccCCCCeEEEEEccCCCCccHHHHHHHHHHHHHHHcCCCCCC-CEEEEECCChHHHHHHHHHHH
Confidence            5667999999999999888888999999999999999999999999999999987776 569999999999999999999


Q ss_pred             cCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHh
Q 028372           91 RGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQD  170 (210)
Q Consensus        91 ~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  170 (210)
                      +|++|++|+|+++++.|+++|+.+||+|+.++.+.+++++.+.+++++++. +.+|++||+|+.++..||.|+++||++|
T Consensus        81 ~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~~~~~~~~~~~t~~~Ei~~q  159 (290)
T TIGR01138        81 KGYRMKLLMPDNMSQERKAAMRAYGAELILVTKEEGMEGARDLALELANRG-EGKLLDQFNNPDNPYAHYTSTGPEIWQQ  159 (290)
T ss_pred             cCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHhC-CCCCCCccCCcccHHHHhHhHHHHHHHH
Confidence            999999999999999999999999999999997556888888999998887 4468999999999877899999999999


Q ss_pred             hCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          171 SGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       171 ~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +++.+|+||+|+||||+++|++.+||+.+|++|||+|.
T Consensus       160 ~~~~~d~iv~~vG~Gg~~~Gv~~~lk~~~~~~kvi~Ve  197 (290)
T TIGR01138       160 TGGRITHFVSSMGTTGTIMGVSRFLKEQNPPVQIVGLQ  197 (290)
T ss_pred             cCCCCCEEEECCCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence            97679999999999999999999999999999999985

Alternate name: O-acetylserine (thiol)-lyase

>TIGR01136 cysKM cysteine synthases

Probab=100.00  E-value=1.1e-50  Score=341.36  Aligned_cols=197  Identities=57%  Similarity=0.958  Sum_probs=183.9

Q ss_pred             hccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHc
Q 028372           12 TELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR   91 (210)
Q Consensus        12 ~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~   91 (210)
                      ...+++|||++++.|+...|.+||+|+|++|||||||+|++.+++..+.++|.+.++ ++|+++|+||||+|+|++|+.+
T Consensus         2 ~~~vg~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~g-~~vv~aSsGN~g~alA~~a~~~   80 (299)
T TIGR01136         2 EELIGNTPLVRLNRLAPGCDARVLAKLEGRNPSGSVKDRIALSMIEDAEKRGLLKPG-DTIIEATSGNTGIALAMVAAAK   80 (299)
T ss_pred             ccccCCCceEEccccCCCCCceEEEEEcccCCCCCccHHHHHHHHHHHHHcCCCCCC-CEEEEeCCChHHHHHHHHHHHc
Confidence            457899999999999988888999999999999999999999999999999987766 5699999999999999999999


Q ss_pred             CCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhh
Q 028372           92 GYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS  171 (210)
Q Consensus        92 g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~  171 (210)
                      |++|++|||+++++.|+++|+.+||+|+.++++.+++++.+.+++++++.+++++++||+|+.++..||.+++.||++|+
T Consensus        81 G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~ql  160 (299)
T TIGR01136        81 GYKLILTMPETMSLERRKLLRAYGAELILTPAEEGMKGAIDKAEELAAETNKYVMLDQFENPANPEAHYKTTGPEIWRDT  160 (299)
T ss_pred             CCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHhhCCCeEecCCCCCchhHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999998656788999999998876578899999999988889999999999999


Q ss_pred             CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          172 GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       172 ~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++.||+||+|+|+||+++|++.+||+.+|.++||+|..
T Consensus       161 ~~~~d~iv~~vG~Gg~~~G~~~~~~~~~~~~~vi~Ve~  198 (299)
T TIGR01136       161 DGRIDHFVAGVGTGGTITGVGRYLKEQNPNIKIVAVEP  198 (299)
T ss_pred             CCCCCEEEEcCchhHHHHHHHHHHHHhCCCCEEEEEec
Confidence            76799999999999999999999999999999999864

This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.

>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.1e-51  Score=344.77  Aligned_cols=199  Identities=26%  Similarity=0.350  Sum_probs=185.7

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++...+.+|||++++.|++.+|++||+|+|++||+||||.||+++.++.+.+++..   ...||++|+||||+
T Consensus        11 ~i~~A~~ri~~~~~~TPL~~s~~Ls~~~g~~v~lK~E~lQ~~gSFK~RGA~n~i~~Ls~e~~~---~~gViaaSaGNHaQ   87 (347)
T COG1171          11 DILAAAARLKGVVNPTPLQRSPSLSERLGAEIYLKRENLQPVGSFKIRGAYNKLSSLSEEEER---AAGVIAASAGNHAQ   87 (347)
T ss_pred             HHHHHHHHHhCcccCCCcccchhhHHhhCceEEEeeccCcccccchhhhHHHHHHhcChhhhh---cCceEEecCCcHHH
Confidence            456688999999999999999999999999999999999999999999999999987644321   36699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      ++|++|+++|+|++||||.++|..|.+.++.|||+|+.++.  +|+++...+++++++. ++.|++||++|+. ++||+|
T Consensus        88 GvA~aa~~lGi~a~IvMP~~tp~~Kv~a~r~~GaeVil~g~--~~dda~~~a~~~a~~~-G~~~i~pfD~p~v-iAGQGT  163 (347)
T COG1171          88 GVAYAAKRLGIKATIVMPETTPKIKVDATRGYGAEVILHGD--NFDDAYAAAEELAEEE-GLTFVPPFDDPDV-IAGQGT  163 (347)
T ss_pred             HHHHHHHHhCCCEEEEecCCCcHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHHc-CCEEeCCCCCcce-eecccH
Confidence            99999999999999999999999999999999999999996  4899999999999998 8999999999998 899999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      ++.||++|+++.||+||||+|+||+++|++.++|...|+++||||.
T Consensus       164 i~lEileq~~~~~d~v~vpvGGGGLisGia~~~k~~~p~~~vIGVE  209 (347)
T COG1171         164 IALEILEQLPDLPDAVFVPVGGGGLISGIATALKALSPEIKVIGVE  209 (347)
T ss_pred             HHHHHHHhccccCCEEEEecCccHHHHHHHHHHHHhCCCCeEEEEe
Confidence            9999999996557999999999999999999999999999999985

>TIGR01139 cysK cysteine synthase A

Probab=100.00  E-value=3.9e-50  Score=337.93  Aligned_cols=196  Identities=57%  Similarity=0.949  Sum_probs=179.9

Q ss_pred             hccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHc
Q 028372           12 TELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR   91 (210)
Q Consensus        12 ~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~   91 (210)
                      ...+++|||+++++ ....|.+||+|+|++|||||||+|++.+++..+.++|.+.+| .+|+++|+||||+|+|++|+++
T Consensus         2 ~~~~g~TPl~~~~~-~~~~g~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g-~~vv~aSsGN~g~alA~~a~~~   79 (298)
T TIGR01139         2 SELIGNTPLVRLNR-IEGCNANVFVKLEGRNPSGSVKDRIALNMIWDAEKRGLLKPG-KTIVEPTSGNTGIALAMVAAAR   79 (298)
T ss_pred             ccccCCCceEEccc-cCCCCceEEEEEcccCCCCcchHHHHHHHHHHHHHcCCCCCC-CEEEEeCCChhHHHHHHHHHHc
Confidence            46789999999998 556678999999999999999999999999999999987766 5699999999999999999999


Q ss_pred             CCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCC-eEEcCCCCCChhHHHHHHhHHHHHHHh
Q 028372           92 GYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPD-GYLLRQFENPANPKIHYETTGPEIWQD  170 (210)
Q Consensus        92 g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~n~~~~~~g~~t~~~Ei~~q  170 (210)
                      |++|++|+|+++++.|++.|+.+||+|+.++++.++.++.+.+++++++.++ +++++||+|+.++..||.|++.||++|
T Consensus        80 Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  159 (298)
T TIGR01139        80 GYKLILTMPETMSIERRKLLKAYGAELVLTPGAEGMKGAIAKAEEIAASTPNSYFMLQQFENPANPEIHRKTTGPEIWRD  159 (298)
T ss_pred             CCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEcccccCCcccHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999865556788889998888754 569999999998888999999999999


Q ss_pred             hCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          171 SGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       171 ~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++..||+||+|+|+||+++|++.+|++.+|++|||+|..
T Consensus       160 ~~~~~d~vv~~vG~Gg~~~Gi~~~~~~~~~~~~vi~Ve~  198 (298)
T TIGR01139       160 TDGKLDAFVAGVGTGGTITGVGEVLKEQKPNIKIVAVEP  198 (298)
T ss_pred             hCCCCCEEEEecchhHhHHHHHHHHHhcCCCCEEEEEec
Confidence            976799999999999999999999999999999999963

This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.

>PRK10717 cysteine synthase A; Provisional

Probab=100.00  E-value=8.4e-50  Score=340.24  Aligned_cols=201  Identities=49%  Similarity=0.814  Sum_probs=180.4

Q ss_pred             hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      .++.+.+.+++|||+++++++...|.+||+|+|++|||||||+|++.+++..+.++|.+.++ .+|+++|+||||+|+|+
T Consensus         3 ~~~~~~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~nptGS~K~Rga~~~v~~a~~~g~~~~g-~~vv~aSsGN~g~alA~   81 (330)
T PRK10717          3 IFEDVSDTIGNTPLIRLNRASEATGCEILGKAEFLNPGGSVKDRAALNIIWDAEKRGLLKPG-GTIVEGTAGNTGIGLAL   81 (330)
T ss_pred             hhhhHHHHhCCCceEEccccCCCCCCeEEEEeeccCCCCCchHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHHH
Confidence            57788999999999999999988889999999999999999999999999999999987776 56999999999999999


Q ss_pred             HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCC------CHHHHHHHHHHHHHhCC-CeEEcCCCCCChhHHHH
Q 028372           87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL------RFEEILEKGEEILKKTP-DGYLLRQFENPANPKIH  159 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~------~~~~~~~~a~~~~~~~~-~~~~~~~~~n~~~~~~g  159 (210)
                      +|+.+|++|++|+|...++.|+++++.+||+|+.++...      ..+.+.+.++++.++.+ +++|++||+||.++..|
T Consensus        82 ~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g  161 (330)
T PRK10717         82 VAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAAPYANPNNYVKGAGRLAEELVASEPNGAIWANQFDNPANREAH  161 (330)
T ss_pred             HHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCcccccccchHHHHHHHHHHHHhhCCCCeEecCCCCChhhHHHH
Confidence            999999999999999999999999999999999999631      12233444555544432 78999999999987789


Q ss_pred             HHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          160 YETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       160 ~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      |.|++.||++|++..+|+||+|+||||+++|++.+||+.+|+++||+|.
T Consensus       162 ~~t~a~Ei~~ql~~~~d~iv~~vG~GG~~~Gi~~~~k~~~~~~~vi~Ve  210 (330)
T PRK10717        162 YETTGPEIWEQTDGKVDGFVCAVGTGGTLAGVSRYLKETNPKVKIVLAD  210 (330)
T ss_pred             HHhHHHHHHHhcCCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEc
Confidence            9999999999997679999999999999999999999999999999985

>PRK07476 eutB threonine dehydratase; Provisional

Probab=100.00  E-value=6.2e-50  Score=339.92  Aligned_cols=198  Identities=23%  Similarity=0.315  Sum_probs=184.3

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..++++|...+++|||+++++++...|.+||+|+|++|||||||+|++.+++.++.++|.    .++||++|+||||+
T Consensus         5 ~i~~a~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~K~R~a~~~i~~a~~~~~----~~gvv~aSsGN~g~   80 (322)
T PRK07476          5 DIYRARRRIAGRVRRTPLVASASLSARAGVPVWLKLETLQPTGSFKLRGATNALLSLSAQER----ARGVVTASTGNHGR   80 (322)
T ss_pred             HHHHHHHHHhCCCCCCCceechhhHHhhCCeEEEEEccCCCCCCchHHHHHHHHHhhhhhhh----CCeEEEECCChHHH
Confidence            45778999999999999999999998888899999999999999999999999999998886    24599999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|+++++.|++.|+.+||+|+.++.  +++++.+.+.+++++. +++|++||+||.+ ..|++|
T Consensus        81 alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~~~~~~-g~~~~~~~~n~~~-~~g~~t  156 (322)
T PRK07476         81 ALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGR--SQDDAQAEVERLVREE-GLTMVPPFDDPRI-IAGQGT  156 (322)
T ss_pred             HHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCCcce-eechhH
Confidence            99999999999999999999999999999999999999985  3788888899888876 7799999999998 688999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +++||++|++ ++|+||+|+|+||+++|++.+||..+|+++||+|..
T Consensus       157 ~~~Ei~~Q~~-~~d~iv~~vG~GG~~~Gv~~~~k~~~~~~~vigVe~  202 (322)
T PRK07476        157 IGLEILEALP-DVATVLVPLSGGGLASGVAAAVKAIRPAIRVIGVSM  202 (322)
T ss_pred             HHHHHHHhCc-CCCEEEEEcChHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            9999999994 699999999999999999999999999999999964

>PRK08526 threonine dehydratase; Provisional

Probab=100.00  E-value=6.1e-50  Score=348.10  Aligned_cols=198  Identities=24%  Similarity=0.341  Sum_probs=184.6

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++.+.+++|||+++++|+...|.+||+|+|++|||||||+|++.+.+..+.+++.    .++||++|+||||+
T Consensus         6 ~i~~a~~~i~~~i~~TPl~~~~~Ls~~~g~~iylK~E~lqptGSfK~RgA~n~i~~l~~~~~----~~gVV~aSaGNhg~   81 (403)
T PRK08526          6 KIYQAKQRISGFVNKTPFAYAPFLSKISGAEVYLKKENLQITGAYKIRGAYNKIANLSEEQK----QHGVIAASAGNHAQ   81 (403)
T ss_pred             HHHHHHHHHhCcCCCCCccchHHHHHHhCCeEEEEecCCCCCCCCHHHHHHHHHHhccHhhc----CCEEEEECccHHHH
Confidence            56778999999999999999999998888999999999999999999999999998876553    36699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      ++|++|+.+|++|++|||+.++..|++.++.|||+|+.++.  +++++...+++++++. +++|++||+|+.+ ++||+|
T Consensus        82 avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~--~~~~a~~~a~~~a~~~-g~~~v~p~~~~~~-i~G~gt  157 (403)
T PRK08526         82 GVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGD--NYDEAYAFALEYAKEN-NLTFIHPFEDEEV-MAGQGT  157 (403)
T ss_pred             HHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEeeCCCCCHHH-HhhhHH
Confidence            99999999999999999999999999999999999999985  5899999999998876 7899999999987 899999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++.||++|+ +.+|+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus       158 ia~EI~eq~-~~~D~vvvpvGgGGl~aGia~~~k~~~p~~kvigVep  203 (403)
T PRK08526        158 IALEMLDEI-SDLDMVVVPVGGGGLISGIASAAKQINPNIKIIGVGA  203 (403)
T ss_pred             HHHHHHHhc-CCCCEEEEecChHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            999999999 4799999999999999999999999999999999963

>PRK08198 threonine dehydratase; Provisional

Probab=100.00  E-value=1.2e-49  Score=347.62  Aligned_cols=198  Identities=26%  Similarity=0.423  Sum_probs=184.3

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++.+.+++|||+++++|+...|.+||+|+|++|||||||+|++.+++.++.+++.    .++||++|+||||+
T Consensus         8 ~i~~a~~~i~~~i~~TPl~~~~~ls~~~g~~i~~K~E~~nptGS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g~   83 (404)
T PRK08198          8 DIEEARERLKGVVRRTPLEYSRTLSELTGAEVYLKCENLQRTGSFKIRGAYNKIASLSEEER----ARGVVAASAGNHAQ   83 (404)
T ss_pred             HHHHHHHHHhccCCCCCceehhhHHHHhCCEEEEEECCCCCCCCCHHHHHHHHHHhccHhhc----CCEEEEECCCHHHH
Confidence            45678999999999999999999998888999999999999999999999999999876553    36799999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      ++|++|+.+|++|++|||++++..|++.++.+||+|+.++.  +++++.+.+++++++. +++|++||+|+.+ ..||+|
T Consensus        84 alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~~--~~~~~~~~a~~~~~~~-g~~~~~~~~~~~~-~~g~~t  159 (404)
T PRK08198         84 GVAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGD--VYDEALAKAQELAEET-GATFVHPFDDPDV-IAGQGT  159 (404)
T ss_pred             HHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEecCCCCCccH-HHHHHH
Confidence            99999999999999999999999999999999999999984  5899999999998886 7999999999998 789999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +|+||++|+ +++|+||+|+||||+++|++.+||+.+|+++||||..
T Consensus       160 ~a~EI~~q~-~~~d~vv~~vG~GG~~~Gi~~~~k~~~p~~kiigVe~  205 (404)
T PRK08198        160 IGLEILEDL-PDVDTVVVPIGGGGLISGVATAVKALRPEVRVIGVQA  205 (404)
T ss_pred             HHHHHHHhC-CCCCEEEEEeCHhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence            999999999 4799999999999999999999999999999999963

>PLN02970 serine racemase

Probab=100.00  E-value=2.5e-49  Score=336.90  Aligned_cols=197  Identities=19%  Similarity=0.230  Sum_probs=181.4

Q ss_pred             hhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028372            4 NNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG   83 (210)
Q Consensus         4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~a   83 (210)
                      +..+.+++...+++|||+++++++...|.+||+|+|++|||||||+|++.+++..+.+++.    .++||++|+||||.|
T Consensus        14 i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~nptGSfKdRga~~~i~~~~~~~~----~~~vv~aSsGN~g~a   89 (328)
T PLN02970         14 IREARKRIAPFIHRTPVLTSSSLDALAGRSLFFKCECFQKGGAFKFRGACNAIFSLSDDQA----EKGVVTHSSGNHAAA   89 (328)
T ss_pred             HHHHHHHHhCcCCCCCeeechhhHHhhCCeEEEEecCCCCCCCcHHHHHHHHHHHhhHhhc----CCeEEEECCcHHHHH
Confidence            4567888999999999999999988788899999999999999999999999999876553    367999999999999


Q ss_pred             HHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhH
Q 028372           84 LAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETT  163 (210)
Q Consensus        84 lA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~  163 (210)
                      +|++|+.+|++|++|||+++++.|++.|+.+||+|+.++.  +++++.+.+++++++. +++|++||+|+.+ ..||+|+
T Consensus        90 lA~~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~--~~~~~~~~a~~la~~~-g~~~~~~~~n~~~-~~g~~t~  165 (328)
T PLN02970         90 LALAAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEP--TVESREAVAARVQQET-GAVLIHPYNDGRV-ISGQGTI  165 (328)
T ss_pred             HHHHHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCC--CHHHHHHHHHHHHHhc-CCEEeCCCCCcch-hhehHHH
Confidence            9999999999999999999999999999999999999996  4788888899988774 8999999999987 6799999


Q ss_pred             HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       164 ~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++||++|++ .||+||+|+|+||+++|++++||+.+|+++||+|..
T Consensus       166 g~Ei~~ql~-~~D~vv~~vG~GG~~~Gi~~~lk~~~~~~kvi~Vep  210 (328)
T PLN02970        166 ALEFLEQVP-ELDVIIVPISGGGLISGIALAAKAIKPSIKIIAAEP  210 (328)
T ss_pred             HHHHHHhcc-CCCEEEEeeCchHHHHHHHHHHHhcCCCCEEEEEEE
Confidence            999999995 699999999999999999999999999999999853

>PLN02356 phosphateglycerate kinase

Probab=100.00  E-value=5.3e-49  Score=340.87  Aligned_cols=201  Identities=37%  Similarity=0.639  Sum_probs=175.1

Q ss_pred             hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      ....+.+.+++|||++++.++...|.+||+|+|++|||||||||++.+++.++.++|.+.++ ..|+++||||||+|+|+
T Consensus        43 ~~~~~~~~ig~TPLv~~~~l~~~~g~~v~~KlE~~nPtGS~KdR~A~~~i~~a~~~g~~~~~-g~VveaSSGN~g~alA~  121 (423)
T PLN02356         43 PRNGLIDAIGNTPLIRINSLSEATGCEILGKCEFLNPGGSVKDRVAVKIIEEALESGQLFPG-GVVTEGSAGSTAISLAT  121 (423)
T ss_pred             hhhhHHhhcCCCceEECcccccccCCEEEEEeccCCCCCCHHHHHHHHHHHHHHhCCccCCC-CEEEEeCCHHHHHHHHH
Confidence            35568888999999999999888888999999999999999999999999999999987666 45888999999999999


Q ss_pred             HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC-----CCCH-HHHH---HHHHHHHHh-----------------
Q 028372           87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS-----ALRF-EEIL---EKGEEILKK-----------------  140 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~-----~~~~-~~~~---~~a~~~~~~-----------------  140 (210)
                      +|+.+|++|++|||+++++.|++.|+.+||+|+.+++     .+++ ..+.   ..+++++++                 
T Consensus       122 ~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~~~~~~~~~~~~~a~~~~~~a~e~a~~~~~~~~~~~~~~~~~~~  201 (423)
T PLN02356        122 VAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRPVSITHKDHYVNIARRRALEANELASKRRKGSETDGIHLEKTNG  201 (423)
T ss_pred             HHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECCccCCCcchhHHHHHHHHHHHHHHHHHhhhcccccccccccccc
Confidence            9999999999999999999999999999999999964     1122 1111   224444433                 


Q ss_pred             ---------------CCCeEEcCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEE
Q 028372          141 ---------------TPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVV  205 (210)
Q Consensus       141 ---------------~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vi  205 (210)
                                     .++.+|++||+|+.|+..|+..+|+||++|+++++|+||+|+||||+++|++++||+.+|+++||
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~q~~n~~n~~ahg~gTg~EI~eQl~g~~D~vVv~vGtGGti~Gva~~lK~~~P~vkVi  281 (423)
T PLN02356        202 CISEEEKENSLFSSSCTGGFFADQFENLANFRAHYEGTGPEIWEQTQGNLDAFVAAAGTGGTLAGVSRFLQEKNPNIKCF  281 (423)
T ss_pred             ccccccccccccccCCCCcEecCccCCcchHHHHHhhHHHHHHHhcCCCCCEEEeCCCchHHHHHHHHHHHHhCCCCEEE
Confidence                           14789999999999988877777999999997689999999999999999999999999999999


Q ss_pred             EEE
Q 028372          206 LRV  208 (210)
Q Consensus       206 gv~  208 (210)
                      +|-
T Consensus       282 gVe  284 (423)
T PLN02356        282 LID  284 (423)
T ss_pred             EEe
Confidence            985

>PRK06382 threonine dehydratase; Provisional

Probab=100.00  E-value=3.8e-49  Score=344.32  Aligned_cols=198  Identities=24%  Similarity=0.328  Sum_probs=183.5

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++.+.+++|||++++.|+...|.+||+|+|++|||||||+|++.+++..+.+.+.    .+.|+++|+||||+
T Consensus        11 ~i~~a~~~~~~~i~~TPl~~~~~ls~~~g~~v~~K~E~~nptGSfK~Rga~~~i~~~~~~~~----~~gvv~aSsGN~g~   86 (406)
T PRK06382         11 DILYAKSYLEGYLNRTPLIHSTTFGDEYGGDIYFKLENFQKTGSFKSRGAVFKFSKLSEDEL----RNGVITASAGNHAQ   86 (406)
T ss_pred             HHHHHHHHHhCcCCCCCeeEhhhhHHHhCCEEEEEecCCCCCCCCHHHHHHHHHHhcchhcc----CCeEEEECCCHHHH
Confidence            44578899999999999999999998888999999999999999999999999998876553    24699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|||+.+++.|++.++.+||+|+.++.  +++++.+.+++++++. +++|++||+|+.+ +.|++|
T Consensus        87 a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~--~~~~a~~~a~~la~~~-~~~~v~~~~~~~~-i~g~~t  162 (406)
T PRK06382         87 GVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGR--DYDEAHRYADKIAMDE-NRTFIEAFNDRWV-ISGQGT  162 (406)
T ss_pred             HHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEecCccCChHH-HHHHHH
Confidence            99999999999999999999999999999999999999985  4889999999998886 7899999999998 789999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +++||++|+ +.||+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus       163 ~~~Ei~eq~-~~~d~vvvpvG~GG~~~Gv~~~~k~~~p~~~vigVe~  208 (406)
T PRK06382        163 IGLEIMEDL-PDLDQIIVPVGGGGLISGIALAAKHINPNVKIIGIES  208 (406)
T ss_pred             HHHHHHHhc-CCCCEEEEeeChHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            999999999 4799999999999999999999999999999999964

>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase

Probab=100.00  E-value=2.5e-48  Score=325.99  Aligned_cols=193  Identities=58%  Similarity=0.922  Sum_probs=177.2

Q ss_pred             cCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcE
Q 028372           16 GNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNL   95 (210)
Q Consensus        16 ~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~   95 (210)
                      ++|||++++.++...|.+||+|+|++|||||||+|++.+++..+.++|...++ .+|+++|+||||+|+|++|+++|++|
T Consensus         1 g~TPl~~~~~l~~~~g~~i~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~~~~~-~~vv~~SsGN~g~alA~~a~~~G~~~   79 (291)
T cd01561           1 GNTPLVRLNRLSPGTGAEIYAKLEFFNPGGSVKDRIALYMIEDAEKRGLLKPG-TTIIEPTSGNTGIGLAMVAAAKGYRF   79 (291)
T ss_pred             CCCCEEEccccCCCCCCeEEEEecccCCCCcchHHHHHHHHHHHHHcCCCCCC-CEEEEeCCChHHHHHHHHHHHcCCeE
Confidence            58999999999988889999999999999999999999999999999876555 56999999999999999999999999


Q ss_pred             EEEEcCCCCHHHHHHHHHcCCEEEEECCCC--CHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhCC
Q 028372           96 IIVMPSTCSMERRIVLRALGAEIILADSAL--RFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGG  173 (210)
Q Consensus        96 ~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~  173 (210)
                      ++|+|.++++.|+++|+.+||+|+.++.+.  +.+++.+.+++++++.++++|++||+||.++..|+.|+++||++|++.
T Consensus        80 ~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~g~~~t~~~Ei~~ql~~  159 (291)
T cd01561          80 IIVMPETMSEEKRKLLRALGAEVILTPEAEADGMKGAIAKARELAAETPNAFWLNQFENPANPEAHYETTAPEIWEQLDG  159 (291)
T ss_pred             EEEECCCCCHHHHHHHHHcCCEEEEeCCCCcCCHHHHHHHHHHHHhhCCCcEEecCCCCchHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999753  457888889998887768999999999999654555999999999966


Q ss_pred             CCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          174 KVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       174 ~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      .||+||+|+|+||+++|++.+|++.+|+++||+|..
T Consensus       160 ~~d~vv~~~G~Gg~~~Gi~~~~~~~~~~~~vi~Ve~  195 (291)
T cd01561         160 KVDAFVAGVGTGGTITGVARYLKEKNPNVRIVGVDP  195 (291)
T ss_pred             CCCEEEEeCChHHHHHHHHHHHHHhCCCCEEEEEec
Confidence            799999999999999999999999999999999964

CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=100.00  E-value=8.5e-50  Score=328.92  Aligned_cols=204  Identities=65%  Similarity=1.008  Sum_probs=194.1

Q ss_pred             hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGL   84 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~al   84 (210)
                      ....+.+.+.+|+|||+.+.+....+.++|++|+|++||+||.|||.++.|+.+|+.+|.++||+.+++++||||+|.+|
T Consensus        40 ~~~~~~~~~liG~TPlv~ln~i~~g~~~~i~~K~E~~~p~~SvKdRia~sMi~~Ae~~G~i~pg~stliEpTSGNtGigL  119 (362)
T KOG1252|consen   40 ILILWDVRDLIGNTPLVKLNKIAGGCVARIAAKLEYMNPGGSVKDRIAWSMIEDAEKKGLITPGKSTLIEPTSGNTGIGL  119 (362)
T ss_pred             hhhhhhHHHHhCCCceEEeccccCCccceEEEEeeecCCcccHHHHHHHHHHHHHHHcCCccCCceEEEecCCCchHHHH
Confidence            34567788999999999999998888899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHH---HHHHHHHHHHhCCCeEEcCCCCCChhHHHHHH
Q 028372           85 AFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEE---ILEKGEEILKKTPDGYLLRQFENPANPKIHYE  161 (210)
Q Consensus        85 A~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  161 (210)
                      |++|+..|++|+++||++++.+|+..|+.+||+|+.++....+..   +...+.++..+.|+.+.++||.||.||..||.
T Consensus       120 A~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a~~~~~~e~ai~~a~~l~~~~pna~~l~Qf~np~Np~~hy~  199 (362)
T KOG1252|consen  120 AYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPAAGMKGPESAIGKAEELLNKTPNAYILDQFHNPGNPLAHYE  199 (362)
T ss_pred             HHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChHHccCChHHHHHHHHHHHHhCCChHHHHHhcCCCCcccccc
Confidence            999999999999999999999999999999999999997655555   88899999999999999999999999999999


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          162 TTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       162 t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      ++++||++|+.+++|.||.++|||||++|+.+++|+.+|+++|++|-
T Consensus       200 ttg~EI~~q~~g~vDi~V~gaGTGGTitgvGRylke~~~~~kVv~vd  246 (362)
T KOG1252|consen  200 TTGPEIWRQLDGKVDIFVAGAGTGGTITGVGRYLKEQNPNIKVVGVD  246 (362)
T ss_pred             cccHHHHHHhcCCCCEEEeccCCCceeechhHHHHHhCCCCEEEEeC
Confidence            99999999999899999999999999999999999999999999983

>TIGR02991 ectoine_eutB ectoine utilization protein EutB

Probab=100.00  E-value=1e-48  Score=331.52  Aligned_cols=198  Identities=22%  Similarity=0.308  Sum_probs=182.0

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++...+++|||+++++++...|.+||+|+|++|||||||+|++.+++..+.+...    ..+++++|+||||+
T Consensus         5 ~i~~a~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g~   80 (317)
T TIGR02991         5 DIERAAARISGRVEETPLVESPSLSELCGVPVHLKLEHRQTTGSFKLRGATNAVLSLSDTQR----AAGVVAASTGNHGR   80 (317)
T ss_pred             HHHHHHHHHhCcCCCCCceechhhHHhhCCeEEEEeccCCCCCCcHHHHHHHHHHhhhHhcc----CCeEEEECCCHHHH
Confidence            56788999999999999999999988788899999999999999999999999998764322    25699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|+..++.|++.|+.+||+|+.++.  +++++.+.+++++++. +++|++||+||.+ ..||+|
T Consensus        81 alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~~~~~~-g~~~~~~~~n~~~-~~g~~t  156 (317)
T TIGR02991        81 ALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGR--SQDDAQEEVERLVADR-GLTMLPPFDHPDI-VAGQGT  156 (317)
T ss_pred             HHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCC--CHHHHHHHHHHHHHhc-CCEeeCCCCChHH-HhhHHH
Confidence            99999999999999999999999999999999999999996  4788888899988876 7899999999998 689999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +++||++|+ +++|+||+|+|+||+++|++++||+.+|+++||+|..
T Consensus       157 ~a~Ei~~q~-~~~d~vvv~~G~Gg~~~Gi~~~~k~~~p~~~vigvep  202 (317)
T TIGR02991       157 LGLEVVEQM-PDLATVLVPLSGGGLASGVAMAVKAARPDTRVIGVSM  202 (317)
T ss_pred             HHHHHHHhC-CCCCEEEEEcChhHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            999999999 4689999999999999999999999999999999864

Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.

>PRK12483 threonine dehydratase; Reviewed

Probab=100.00  E-value=7.4e-49  Score=348.97  Aligned_cols=194  Identities=26%  Similarity=0.365  Sum_probs=179.3

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      ..++.+.+.+|||++++.|++..|.+||+|+|++|||||||+|+|.+++..+.++..    .+.||++|+||||+++|++
T Consensus        28 ~~~i~~~v~~TPL~~~~~Ls~~~g~~IylK~E~lqptGSfK~RGA~n~i~~l~~~~~----~~GVV~aSaGNha~gvA~a  103 (521)
T PRK12483         28 AARVYDVARETPLQRAPNLSARLGNQVLLKREDLQPVFSFKIRGAYNKMARLPAEQL----ARGVITASAGNHAQGVALA  103 (521)
T ss_pred             HHHHhhhcCCCCeeEchhhhHhhCCEEEEEEcCCCCCCchHHHHHHHHHHHhHHHHh----cCcEEEECCCHHHHHHHHH
Confidence            346788999999999999999889999999999999999999999999987764332    2569999999999999999


Q ss_pred             HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372           88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI  167 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  167 (210)
                      |+.+|++|++|||..++..|++.++.+||+|+.++.  +++++.+.+++++++. +++|++||+|+.+ ++|++|+|.||
T Consensus       104 A~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~--~~d~a~~~A~~la~e~-g~~~v~pfdd~~v-iaGqgTig~EI  179 (521)
T PRK12483        104 AARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGE--SFPDALAHALKLAEEE-GLTFVPPFDDPDV-IAGQGTVAMEI  179 (521)
T ss_pred             HHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCeeeCCCCChHH-HHHHHHHHHHH
Confidence            999999999999999999999999999999999985  5899999999999887 7899999999998 78999999999


Q ss_pred             HHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       168 ~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++|+++.||+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus       180 ~eQ~~~~~D~VvvpvGgGGliaGia~~~K~~~p~vkVIGVep  221 (521)
T PRK12483        180 LRQHPGPLDAIFVPVGGGGLIAGIAAYVKYVRPEIKVIGVEP  221 (521)
T ss_pred             HHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEEe
Confidence            999965799999999999999999999999999999999963

>PRK08638 threonine dehydratase; Validated

Probab=100.00  E-value=4.5e-49  Score=335.49  Aligned_cols=197  Identities=27%  Similarity=0.395  Sum_probs=181.9

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++.+.+++|||++++.+++..|.+||+|+|++|||||||||++.+++..+.+...    .++|+++|+||||.
T Consensus        13 ~i~~a~~~i~~~i~~TPlv~~~~l~~~~g~~i~~K~E~~nptGS~KdR~a~~~i~~~~~~~~----~~~vv~~SsGN~g~   88 (333)
T PRK08638         13 DIIEAKQRLAGRIRKTPLPRSNYLSERCKGEIFLKLENMQRTGSFKIRGAFNKLSSLTDAEK----RKGVVACSAGNHAQ   88 (333)
T ss_pred             HHHHHHHHhhCcCcCCCceechhhHHhhCCeEEEEeccCCccCCcHHHHHHHHHHhccHHhc----CCeEEEeCCcHHHH
Confidence            45678999999999999999999988888899999999999999999999999998765332    25799999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|++.++.|+++++.+||+|+.++.  +++++.+.+++++++. +++|++||+||.+ ..||.|
T Consensus        89 alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~~a~~~-g~~~~~~~~~~~~-~~g~~t  164 (333)
T PRK08638         89 GVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGD--NFNDTIAKVEEIVEEE-GRTFIPPYDDPKV-IAGQGT  164 (333)
T ss_pred             HHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECc--CHHHHHHHHHHHHHhc-CCEEcCcCCCcch-hccccH
Confidence            99999999999999999999999999999999999999984  4788889999998886 7899999999998 689999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +++||++|+ +++|+||+|+|+||+++|++.+||+.+|+++||+|-
T Consensus       165 ~a~Ei~~q~-~~~d~vv~~vG~Gg~~~Gv~~~lk~~~~~~~vigVe  209 (333)
T PRK08638        165 IGLEILEDL-WDVDTVIVPIGGGGLIAGIAVALKSINPTIHIIGVQ  209 (333)
T ss_pred             HHHHHHhhc-CCCCEEEEEeChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence            999999999 579999999999999999999999999999999985

>PRK07048 serine/threonine dehydratase; Validated

Probab=100.00  E-value=7.8e-49  Score=333.13  Aligned_cols=198  Identities=21%  Similarity=0.287  Sum_probs=182.2

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++...+++|||+++++++...|.+||+|+|++|||||||+|++.+++.++.+++.    .++|+++|+||||+
T Consensus        10 ~i~~a~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g~   85 (321)
T PRK07048         10 DVAAAAARLAGVAHRTPVLTSRTADARTGAQVFFKCENFQRMGAFKFRGAYNALSQFSPEQR----RAGVVTFSSGNHAQ   85 (321)
T ss_pred             HHHHHHHHhhCCCCCCCCccchhhHHhcCCeEEEEeccCCCCCCeeHHHHHHHHHhhhHhhc----CCcEEEeCCCHHHH
Confidence            45678999999999999999999987778899999999999999999999999998875432    25699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|++.++.|++.|+.+||+|+.++..  ++++.+.+++++++. +++|++||+|+.+ ..|++|
T Consensus        86 alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~~--~~~~~~~a~~l~~~~-g~~~~~~~~~~~~-~~g~~t  161 (321)
T PRK07048         86 AIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRY--TEDREEIGRRLAEER-GLTLIPPYDHPHV-IAGQGT  161 (321)
T ss_pred             HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEECCCCCcch-hhccch
Confidence            999999999999999999999999999999999999999963  677888888888876 7999999999988 789999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +++||++|++ .||+||+|+||||+++|++.++|+.+|+++||||..
T Consensus       162 ~~~EI~~q~~-~~D~vv~~vGtGG~~~Gi~~~~k~~~~~~~vigvep  207 (321)
T PRK07048        162 AAKELFEEVG-PLDALFVCLGGGGLLSGCALAARALSPGCKVYGVEP  207 (321)
T ss_pred             HHHHHHhhcC-CCCEEEEecChhHHHHHHHHHHHHhCCCCEEEEEee
Confidence            9999999994 799999999999999999999999999999999964

>TIGR01137 cysta_beta cystathionine beta-synthase

Probab=100.00  E-value=1.6e-48  Score=345.16  Aligned_cols=201  Identities=47%  Similarity=0.790  Sum_probs=182.3

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      ++.+.+.+++|||+++++++...+.+||+|+|++|||||||+|++.+++.++.++|.+.+| ++|+++|+||||+|+|++
T Consensus         2 ~~~~~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~~~~g-~~vv~~ssGN~g~alA~~   80 (454)
T TIGR01137         2 RDNIIDLIGNTPLVRLNKVSKGIKCELLAKCEFFNPGGSVKDRIALRMIEDAEASGRLKPG-DTIIEPTSGNTGIGLALV   80 (454)
T ss_pred             ccchHHhcCCCceEEccccCCCCCceEEEEEhhcCCCcchHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHHHH
Confidence            4567788999999999999988888999999999999999999999999999999988877 679999999999999999


Q ss_pred             HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHH---HHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372           88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE---EILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG  164 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  164 (210)
                      |+.+|++|++|+|+++++.|++.++.+||+|+.++....++   ...+.+++++++.++.+|++||+|+.|+..||.|+|
T Consensus        81 a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~t~~  160 (454)
T TIGR01137        81 AAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTAAAFDSPESHIGVAKRLVREIPGAHILDQYNNPSNPLAHYDGTG  160 (454)
T ss_pred             HHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCCccCCCchHHHHHHHHHHHHhCCCcEecccCCChhhHHHHHHhhH
Confidence            99999999999999999999999999999999998642222   335667778777557888999999999878999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +||++|+++.||+||+|+||||+++|++.++|+.+|+++||||..
T Consensus       161 ~Ei~~q~~~~~d~vv~~vG~Gg~~~G~~~~~~~~~~~~~vi~ve~  205 (454)
T TIGR01137       161 PEILEQCEGKLDMFVAGAGTGGTITGIARYLKESNPKCRIVGADP  205 (454)
T ss_pred             HHHHHHhCCCCCEEEEecCchHHHHHHHHHHHhhCCCCEEEEEec
Confidence            999999976799999999999999999999999999999999963

Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.

>TIGR02079 THD1 threonine dehydratase

Probab=100.00  E-value=1.2e-48  Score=340.97  Aligned_cols=198  Identities=24%  Similarity=0.379  Sum_probs=179.7

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+.+++.+.+++|||++++.|+...|.+||+|+|++|||||||+|++.+++..+.+...    .++||++|+||||+
T Consensus         2 ~i~~a~~~i~~~i~~TPl~~~~~ls~~~g~~iy~K~E~~~ptGSfK~RgA~~~i~~l~~~~~----~~gvv~aSsGN~g~   77 (409)
T TIGR02079         2 DIEAARKRLKEVVPHTPLQLNERLSEKYGANIYLKREDLQPVRSYKIRGAYNFLKQLSDAQL----AKGVVCASAGNHAQ   77 (409)
T ss_pred             hHHHHHHHHhCcCCCCCccccHHHHHHhCCEEEEEecCCCCCCCcHHHHHHHHHHhCCHHhh----CCEEEEECccHHHH
Confidence            45678999999999999999999998888999999999999999999999999987533221    25699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE---EECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHH
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII---LADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIH  159 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~---~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g  159 (210)
                      ++|++|+.+|++|++|||+.+++.|++.++.+||+|+   .++  .+++++.+.+++++++. +++|++||+||.+ +.|
T Consensus        78 a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~vv~v~~~g--~~~~~a~~~a~~~~~~~-g~~~~~~~~~~~~-~~g  153 (409)
T TIGR02079        78 GFAYACRHLGVHGTVFMPATTPKQKIDRVKIFGGEFIEIILVG--DTFDQCAAAAREHVEDH-GGTFIPPFDDPRI-IEG  153 (409)
T ss_pred             HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCCeeEEEEeC--CCHHHHHHHHHHHHHhc-CCEEeCCCCCHhH-hhh
Confidence            9999999999999999999999999999999999754   343  45899999999998886 7899999999998 789


Q ss_pred             HHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          160 YETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       160 ~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      ++|+++||++|+++.||+||+|+|+||+++|++.++|+.+|+++||||.
T Consensus       154 ~~ti~~Ei~~q~~~~~D~vv~pvG~GG~~~Gia~~~k~~~p~~~vigVe  202 (409)
T TIGR02079       154 QGTVAAEILDQLPEKPDYVVVPVGGGGLISGLTTYLAGTSPKTKIIGVE  202 (409)
T ss_pred             hHHHHHHHHHhcCCCCCEEEEEecHhHHHHHHHHHHHHhCCCCEEEEEE
Confidence            9999999999997679999999999999999999999999999999985

This model represents threonine dehydratase, the first step in the pathway converting threonine into isoleucine. At least two other clades of biosynthetic threonine dehydratases have been characterized by models TIGR01124 and TIGR01127. Those sequences described by this model are exclusively found in species containg the rest of the isoleucine pathway and which are generally lacking in members of the those other two clades of threonine dehydratases. Members of this clade are also often gene clustered with other elements of the isoleucine pathway.

>PRK06110 hypothetical protein; Provisional

Probab=100.00  E-value=2e-48  Score=330.68  Aligned_cols=198  Identities=23%  Similarity=0.261  Sum_probs=181.4

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++...+++|||++++++++.+|.+||+|+|++|||||||+|++.+++.++.+++...   ..|+++|+||||+
T Consensus         7 ~i~~a~~~i~~~~~~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~Rga~~~l~~a~~~~~~~---~~vv~aSsGN~g~   83 (322)
T PRK06110          7 ELEAAAAVVYAAMPPTPQYRWPLLAERLGCEVWVKHENHTPTGAFKVRGGLVYFDRLARRGPRV---RGVISATRGNHGQ   83 (322)
T ss_pred             HHHHHHHHHhCcCcCCCcccchhHHHHhCCeEEEEeccCCCcCCcHHHHHHHHHHHhhhhcCCC---ceEEEECCCHHHH
Confidence            4567889999999999999999999888889999999999999999999999999998876533   4599999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|++.++.|+++++.+||+|+.++.  +++++.+.+++++++. ++||++|| |+.+ ..||.|
T Consensus        84 alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~-~~~~-~~G~~t  158 (322)
T PRK06110         84 SVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELIEHGE--DFQAAREEAARLAAER-GLHMVPSF-HPDL-VRGVAT  158 (322)
T ss_pred             HHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEcCCC-CChH-Hhccch
Confidence            99999999999999999999999999999999999999974  5888888999988876 78999998 6666 679999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +++||++|++ .+|+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus       159 ~~~Ei~~q~~-~~D~vv~pvG~Gg~~~Gv~~~~k~~~~~~~vi~Vep  204 (322)
T PRK06110        159 YALELFRAVP-DLDVVYVPIGMGSGICGAIAARDALGLKTRIVGVVS  204 (322)
T ss_pred             HHHHHHhhCC-CCCEEEEecCHHHHHHHHHHHHHHhCCCCEEEEEee
Confidence            9999999995 799999999999999999999999999999999863

>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia

Probab=100.00  E-value=2.4e-48  Score=336.57  Aligned_cols=203  Identities=18%  Similarity=0.264  Sum_probs=179.5

Q ss_pred             chhhhhHhhhcc----------------ccCCceeecccccCCCC--------ceEEEEeCCCCC-CCchhhHHHHHHHH
Q 028372            3 DNNAIKRDVTEL----------------IGNTPMVYLNNVVDGCV--------ARIAAKLETMEP-CSSVKDRIAYSMIK   57 (210)
Q Consensus         3 ~~~~~~~~i~~~----------------~~~TPl~~~~~l~~~~~--------~~i~~K~E~~~p-tGS~K~R~a~~~~~   57 (210)
                      ++..+.+++...                +++|||++++.++..+|        .+||+|+|++|| |||||+|++.+++.
T Consensus        22 ~i~~a~~~i~~~~~~~~~~~~~~~~~~~~~~TPLv~~~~ls~~~g~~~~~~~~~~v~~K~E~~nP~tGSfKdRgA~~~i~  101 (404)
T cd06447          22 DIFDAEARLKRFAPYIAKVFPETAASHGIIESPLLPIPRMKQALEKLYHQPIKGRLLLKADSHLPISGSIKARGGIYEVL  101 (404)
T ss_pred             HHHHHHHHHhhcchhhhhhCccccccCCccCCCceehHHHHHHhccccccCcCceEEEEecCCCCCCCChHHHHHHHHHH
Confidence            344566667666                99999999999886544        799999999999 99999999999986


Q ss_pred             H-----HHHcCCCCCCC----------------eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCC
Q 028372           58 D-----AEDKGLITPGK----------------TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGA  116 (210)
Q Consensus        58 ~-----a~~~g~~~~~~----------------~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga  116 (210)
                      .     +.+.|.+.|+.                ++||++|+||||+|+|++|+.+|++|+||||+++++.|++.|+.+||
T Consensus       102 ~l~~~~a~~~G~l~pg~~~~~~~~~~~~~~~~~~~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GA  181 (404)
T cd06447         102 KHAEKLALEHGLLTLEDDYSKLASEKFRKLFSQYSIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGV  181 (404)
T ss_pred             HHhHHHHHHhCCCCcccchhhhhhhhhhhcccCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCC
Confidence            4     77889888774                48999999999999999999999999999999999999999999999


Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhCC---C-----CCEEEEccCchhHH
Q 028372          117 EIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGG---K-----VDAFISGIGTGGTV  188 (210)
Q Consensus       117 ~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~---~-----~d~vv~pvG~Gg~~  188 (210)
                      +|+.++.  +++++.+.+++++++.++++|++|++++. .++||+|+++||++|+++   .     ||+||+|+|+||++
T Consensus       182 eVv~v~~--~~~~a~~~a~~la~~~~~~~~v~~~n~~~-~iaG~~T~g~EI~eQl~~~~~~vD~~~Pd~VvvpvG~GGli  258 (404)
T cd06447         182 TVVEYET--DYSKAVEEGRKQAAADPMCYFVDDENSRD-LFLGYAVAASRLKAQLAELGIKVDAEHPLFVYLPCGVGGAP  258 (404)
T ss_pred             EEEEECC--CHHHHHHHHHHHHHHCCCeEeCCCCCchh-HHhhHHHHHHHHHHHhhhccCccccCCCCEEEEecCccHHH
Confidence            9999985  58899999999998876788999965555 489999999999999952   3     55899999999999


Q ss_pred             HHHHHHHHhc-CCCCEEEEEE
Q 028372          189 TGAGRFLKEN-NPDIKVVLRV  208 (210)
Q Consensus       189 ~Gi~~~~k~~-~~~~~vigv~  208 (210)
                      +|++++||+. .|+++||+|.
T Consensus       259 ~GIa~~lK~~~~p~~kVigVe  279 (404)
T cd06447         259 GGVAFGLKLIFGDNVHCFFAE  279 (404)
T ss_pred             HHHHHHHHHhcCCCCEEEEEc
Confidence            9999999997 8999999985

D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.

>PRK08639 threonine dehydratase; Validated

Probab=100.00  E-value=9.4e-49  Score=343.08  Aligned_cols=201  Identities=22%  Similarity=0.342  Sum_probs=180.1

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++..+.+...    .++|+++|+||||+
T Consensus        11 ~i~~a~~~i~~~i~~TPl~~~~~ls~~~g~~l~~K~E~~~ptGSfK~RgA~~~i~~l~~~~~----~~~Vv~aSsGN~g~   86 (420)
T PRK08639         11 DIDKAAKRLKDVVPETPLQRNDYLSEKYGANVYLKREDLQPVRSYKLRGAYNAISQLSDEEL----AAGVVCASAGNHAQ   86 (420)
T ss_pred             HHHHHHHHHhCcCcCCCccchHHHHHHhCCEEEEEecCCCCCCCcHHHHHHHHHHhCCHHhh----CCEEEEECccHHHH
Confidence            45678899999999999999999988888999999999999999999999999988533221    26799999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC-CCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHH
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD-SALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYE  161 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  161 (210)
                      ++|++|+.+|++|++|||+.+++.|++.++.+||+|+.+. ...+++++.+.+.+++++. +++|++||+|+.+ ++|++
T Consensus        87 alA~~a~~~G~~~~IvmP~~~~~~k~~~~r~~GA~vv~v~~~g~~~~~a~~~a~~~a~~~-g~~~~~~~~~~~~-~~G~~  164 (420)
T PRK08639         87 GVAYACRHLGIPGVIFMPVTTPQQKIDQVRFFGGEFVEIVLVGDTFDDSAAAAQEYAEET-GATFIPPFDDPDV-IAGQG  164 (420)
T ss_pred             HHHHHHHHcCCCEEEEECCCChHHHHHHHHHcCCCeeEEEEeCcCHHHHHHHHHHHHHhc-CCcccCCCCChhH-hcchh
Confidence            9999999999999999999999999999999999754322 1245899999999998886 7999999999998 78999


Q ss_pred             hHHHHHHHhhCCC--CCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          162 TTGPEIWQDSGGK--VDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       162 t~~~Ei~~q~~~~--~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      |+|+||++|+++.  ||+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus       165 tig~EI~eq~~~~~~~D~vv~~vG~GG~~aGva~~~k~~~p~~~vigVep  214 (420)
T PRK08639        165 TVAVEILEQLEKEGSPDYVFVPVGGGGLISGVTTYLKERSPKTKIIGVEP  214 (420)
T ss_pred             HHHHHHHHhccccCCCCEEEEecChhHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            9999999999655  99999999999999999999999999999999953

>PLN02550 threonine dehydratase

Probab=100.00  E-value=3.4e-48  Score=346.99  Aligned_cols=192  Identities=22%  Similarity=0.366  Sum_probs=177.7

Q ss_pred             hhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372           10 DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA   89 (210)
Q Consensus        10 ~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~   89 (210)
                      ++.+.+.+|||++++.|+..+|.+||+|+|++|||||||+|++.+++..+.++..    .+.|+++|+||||+++|++|+
T Consensus       102 ~v~~~i~~TPL~~s~~LS~~~g~~IylK~E~lqptGSFK~RGA~n~I~~L~~e~~----~~GVV~aSaGNhAqgvA~aA~  177 (591)
T PLN02550        102 KVYDVAIESPLQLAKKLSERLGVKVLLKREDLQPVFSFKLRGAYNMMAKLPKEQL----DKGVICSSAGNHAQGVALSAQ  177 (591)
T ss_pred             hhhccccCChhhhhHHhhHhhCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHhcC----CCCEEEECCCHHHHHHHHHHH
Confidence            5568999999999999999889999999999999999999999999998854432    255999999999999999999


Q ss_pred             HcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHH
Q 028372           90 ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ  169 (210)
Q Consensus        90 ~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  169 (210)
                      ++|++|+||||+.++..|++.++.+||+|+.++.  +++++.+.+++++++. +++|++||+|+.+ ++|++|+|.||++
T Consensus       178 ~lGika~IvmP~~tp~~Kv~~~r~~GAeVvl~g~--~~dea~~~A~~la~e~-g~~fi~pfddp~v-iaGqgTig~EI~e  253 (591)
T PLN02550        178 RLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGD--SYDEAQAYAKQRALEE-GRTFIPPFDHPDV-IAGQGTVGMEIVR  253 (591)
T ss_pred             HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC--CHHHHHHHHHHHHHhc-CCEEECCCCChHH-HHHHHHHHHHHHH
Confidence            9999999999999999999999999999999985  4899999999998886 7899999999998 7899999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          170 DSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       170 q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      |+++.+|+||+|+|+||+++|++.++|+.+|++|||||..
T Consensus       254 Ql~~~~D~VvvpVGgGGLiaGia~~lK~l~p~vkVIGVEp  293 (591)
T PLN02550        254 QHQGPLHAIFVPVGGGGLIAGIAAYVKRVRPEVKIIGVEP  293 (591)
T ss_pred             HcCCCCCEEEEEeChhHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            9965699999999999999999999999999999999964

>PRK06608 threonine dehydratase; Provisional

Probab=100.00  E-value=3.5e-48  Score=330.60  Aligned_cols=198  Identities=19%  Similarity=0.235  Sum_probs=181.5

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++...+++|||++++.|++..|.+||+|+|++||+||||+|++.+++.++.++|.+.   ++|+++|+||||+
T Consensus         9 ~i~~A~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~K~R~a~~~v~~a~~~g~~~---~~vv~~SsGN~g~   85 (338)
T PRK06608          9 NIAAAHNRIKQYLHLTPIVHSESLNEMLGHEIFFKVESLQKTGAFKVRGVLNHLLELKEQGKLP---DKIVAYSTGNHGQ   85 (338)
T ss_pred             HHHHHHHHHhCcCcCCCccchHhHHHHhCCEEEEEeCCCCCCCCcHHHHHHHHHHHhhhhcCcC---CeEEEECCCHHHH
Confidence            4577899999999999999999999888899999999999999999999999999999988643   5799999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|+.+++.|+++++.+||+|+.++.   .+++.+.+++ +++ +++||++||+|+.+ +.|++|
T Consensus        86 alA~~a~~~G~~~~vv~p~~~~~~k~~~l~~~GA~V~~~~~---~~~~~~~a~~-~~~-~~~~~~~~~~~~~~-~~g~~t  159 (338)
T PRK06608         86 AVAYASKLFGIKTRIYLPLNTSKVKQQAALYYGGEVILTNT---RQEAEEKAKE-DEE-QGFYYIHPSDSDST-IAGAGT  159 (338)
T ss_pred             HHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECC---HHHHHHHHHH-HHh-CCCEEcCCCCCHHH-hccHHH
Confidence            99999999999999999999999999999999999999974   3666677777 444 47999999999998 689999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++.||++|++..||+||+|+|+||+++|++.++|+.+|+++||+|-.
T Consensus       160 ~a~Ei~~q~~~~~D~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigVep  206 (338)
T PRK06608        160 LCYEALQQLGFSPDAIFASCGGGGLISGTYLAKELISPTSLLIGSEP  206 (338)
T ss_pred             HHHHHHHhcCCCcCEEEEeechhHHHHHHHHHHHhcCCCCEEEEEee
Confidence            99999999976799999999999999999999999999999999853

>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-48  Score=326.57  Aligned_cols=197  Identities=22%  Similarity=0.279  Sum_probs=184.9

Q ss_pred             hhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028372            4 NNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG   83 (210)
Q Consensus         4 ~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~a   83 (210)
                      ....+.++...+..|||.+.-.+++..|.++|+|+|++||+||||.||+.+++...-++++    +..|+++|.||||+|
T Consensus        53 ~~~~~~~i~~~~~~TPl~~s~~lS~~~g~~vyLK~E~lQpsgSFK~RGa~~~~~kla~~~~----~~gViasSaGNha~a  128 (457)
T KOG1250|consen   53 ISSAHFKIYPVIVETPLLKSVALSKKAGMPVYLKREDLQPSGSFKIRGAGNALQKLAKQQK----KAGVIASSAGNHAQA  128 (457)
T ss_pred             hhhhhhccccceecccchhhhhhhhhcCCceEEEehhcccccceehhhHHHHHHHHHHhhh----cCceEEecCccHHHH
Confidence            3456778899999999999988999999999999999999999999999999998877774    477999999999999


Q ss_pred             HHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhH
Q 028372           84 LAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETT  163 (210)
Q Consensus        84 lA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~  163 (210)
                      +||+|+++|+|++||||..+|..|.+.++.+||+|++.+.  +++++...|+++++++ ++.|++|||+|+. ++|++|+
T Consensus       129 ~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~--~~deAk~~a~~lAke~-gl~yI~pfDhP~I-~aGqgTi  204 (457)
T KOG1250|consen  129 AAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGE--DWDEAKAFAKRLAKEN-GLTYIPPFDHPDI-WAGQGTI  204 (457)
T ss_pred             HHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecc--cHHHHHHHHHHHHHhc-CceecCCCCCchh-hcCcchH
Confidence            9999999999999999999999999999999999999995  4899999999999998 8999999999998 6899999


Q ss_pred             HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       164 ~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +.||.+|++..+++|+||||+||+++||+.++|+..|+++||||.
T Consensus       205 g~EIl~ql~~~~~AI~vpVGGGGLiaGIat~vk~~~p~vkIIGVE  249 (457)
T KOG1250|consen  205 GLEILEQLKEPDGAIVVPVGGGGLIAGIATGVKRVGPHVKIIGVE  249 (457)
T ss_pred             HHHHHHhhcCCCCeEEEecCCchhHHHHHHHHHHhCCCCceEEEe
Confidence            999999997666799999999999999999999999999999985

>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen

Probab=100.00  E-value=5.4e-48  Score=325.56  Aligned_cols=199  Identities=25%  Similarity=0.349  Sum_probs=185.6

Q ss_pred             CchhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchH
Q 028372            2 EDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTG   81 (210)
Q Consensus         2 ~~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g   81 (210)
                      .+++.+++.|.+.+++|||+++++++...|.+||+|+|++|||||||||++.+++.++.++|.    ..+|+++|+||||
T Consensus         2 ~~~~~~~~~i~~~ig~TPl~~~~~l~~~~g~~i~~K~E~~nptgS~Kdr~a~~~l~~~~~~~~----~~~iv~~ssGN~g   77 (304)
T cd01562           2 EDILAAAARIKPVVRRTPLLTSPTLSELLGAEVYLKCENLQKTGSFKIRGAYNKLLSLSEEER----AKGVVAASAGNHA   77 (304)
T ss_pred             hHHHHHHHHHhCcCCCCCcccchhhHHHhCCeEEEEeccCCCcCCcHHHhHHHHHHhcCHhhc----CCcEEEECCCHHH
Confidence            567899999999999999999999988888899999999999999999999999999987762    2569999999999


Q ss_pred             HHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHH
Q 028372           82 VGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYE  161 (210)
Q Consensus        82 ~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  161 (210)
                      .|+|++|+.+|++|++|+|++.++.|+++|+.+||+|+.++++  ++++.+.+++++++. +++|++||+|+.+ ..|+.
T Consensus        78 ~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~--~~~~~~~a~~la~~~-~~~~~~~~~n~~~-~~g~~  153 (304)
T cd01562          78 QGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGED--FDEAEAKARELAEEE-GLTFIHPFDDPDV-IAGQG  153 (304)
T ss_pred             HHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC--HHHHHHHHHHHHHhc-CCEEeCCCCCcch-hccHH
Confidence            9999999999999999999999999999999999999999974  888999999998886 7999999999987 68899


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          162 TTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       162 t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++++||++|++ .||+||+|+||||+++|++++||+.+|++|||+|..
T Consensus       154 ~~~~Ei~~q~~-~~d~vv~~vGtGgt~~Gi~~~lk~~~~~~kvigv~~  200 (304)
T cd01562         154 TIGLEILEQVP-DLDAVFVPVGGGGLIAGIATAVKALSPNTKVIGVEP  200 (304)
T ss_pred             HHHHHHHHhcC-CCCEEEEecCHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            99999999996 499999999999999999999999999999999975

Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.

>PRK07334 threonine dehydratase; Provisional

Probab=100.00  E-value=4.8e-48  Score=337.22  Aligned_cols=198  Identities=23%  Similarity=0.311  Sum_probs=182.5

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+.+++...+++|||+++++++...|.+||+|+|++|||||||+|++.+++.++.++..    .+.|+++|+||||+
T Consensus         9 ~i~~a~~~i~~~i~~TPl~~~~~l~~~~g~~l~~K~E~~nptGS~KdR~a~~~i~~~~~~~~----~~~vv~aSsGN~g~   84 (403)
T PRK07334          9 DIRAAAARLAGQVLRTPCVHSRTLSQITGAEVWLKFENLQFTASFKERGALNKLLLLTEEER----ARGVIAMSAGNHAQ   84 (403)
T ss_pred             HHHHHHHHHhCCCCCCCccchHHHHHhhCCeEEEEeccCCCCCCchHHHHHHHHHhcCHHHh----CCcEEEECCcHHHH
Confidence            45678999999999999999999988788899999999999999999999999998754432    24599999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|...++.|+++++.+||+|+.++.  +++++.+.+++++++. +++|++||+|+.+ ..||.|
T Consensus        85 alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~--~~~~~~~~a~~l~~~~-~~~~~~~~~~~~~-~~g~~t  160 (403)
T PRK07334         85 GVAYHAQRLGIPATIVMPRFTPTVKVERTRGFGAEVVLHGE--TLDEARAHARELAEEE-GLTFVHPYDDPAV-IAGQGT  160 (403)
T ss_pred             HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECc--CHHHHHHHHHHHHHhc-CCEecCCCCCHHH-HHhHHH
Confidence            99999999999999999999999999999999999999974  4888999999998876 7899999999998 689999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +++||++|+ +.||+||+|+|+||+++|++++||+.+|+++||+|..
T Consensus       161 ~~~Ei~~q~-~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~~vi~ve~  206 (403)
T PRK07334        161 VALEMLEDA-PDLDTLVVPIGGGGLISGMATAAKALKPDIEIIGVQT  206 (403)
T ss_pred             HHHHHHhcC-CCCCEEEEecCHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            999999999 5799999999999999999999999999999999864

>PRK06815 hypothetical protein; Provisional

Probab=100.00  E-value=8.2e-48  Score=326.28  Aligned_cols=198  Identities=20%  Similarity=0.247  Sum_probs=180.6

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++.+.+++|||++++.++...|.+||+|+|++|||||||+|++.+++..+.++..    .++++++|+||||+
T Consensus         6 ~i~~a~~~~~~~i~~TPLv~~~~l~~~~g~~i~~K~E~~nptgS~KdR~a~~~~~~l~~~~~----~~~vv~aSsGN~g~   81 (317)
T PRK06815          6 AILEAHQRLRPQVRVTPLEHSPLLSQHTGCEVYLKCEHLQHTGSFKFRGASNKLRLLNEAQR----QQGVITASSGNHGQ   81 (317)
T ss_pred             HHHHHHHHhhCCCCCCCccccHhHHHhhCCeEEEEecCCCCCCCcHHHHHHHHHHhcchhhc----CceEEEECCChHHH
Confidence            56678999999999999999999988788899999999999999999999999987643321    25699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|+.+++.|++.|+.+||+|+.++.+  ++++...+++++++. +++|++||+|+.+ ..||+|
T Consensus        82 alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~~~~~-~~g~~t  157 (317)
T PRK06815         82 GVALAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGD--ALNAELAARRAAEQQ-GKVYISPYNDPQV-IAGQGT  157 (317)
T ss_pred             HHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEecCCCChhh-hcchhH
Confidence            999999999999999999999999999999999999999964  788888888888876 7889999999987 689999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +++||++|++ +||+||+|+|+||+++|++.+||+.+|+++||||..
T Consensus       158 ~a~Ei~~q~~-~~d~vv~~vG~Gg~~~Gi~~~~k~~~~~~~vigVep  203 (317)
T PRK06815        158 IGMELVEQQP-DLDAVFVAVGGGGLISGIATYLKTLSPKTEIIGCWP  203 (317)
T ss_pred             HHHHHHHhcC-CCCEEEEECcHHHHHHHHHHHHHHhCCCCEEEEEEe
Confidence            9999999995 699999999999999999999999999999999863

>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form

Probab=100.00  E-value=1.7e-47  Score=340.13  Aligned_cols=194  Identities=26%  Similarity=0.368  Sum_probs=179.1

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      ..++.+.+.+|||+++++|+...|.+||+|+|++|||||||+|++.+++..+.++..    .++||++|+||||+++|++
T Consensus         8 ~~~v~~~i~~TPL~~~~~Ls~~~g~~i~lK~E~lqptgSfK~RgA~n~i~~l~~~~~----~~gVV~aSaGNha~~vA~a   83 (499)
T TIGR01124         8 TARVYEAAQETPLQKAAKLSERLGNRILIKREDLQPVFSFKLRGAYNKMAQLSPEQK----ARGVIAASAGNHAQGVAFS   83 (499)
T ss_pred             HhHhhCccCCCCeeehHHHHHHhCCEEEEEecCCCCCCCCHHHHHHHHHHHhhHHhc----CCEEEEECCCHHHHHHHHH
Confidence            347889999999999999998888999999999999999999999999988743322    2569999999999999999


Q ss_pred             HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372           88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI  167 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  167 (210)
                      |+++|++|++|||+.++..|++.++.+||+|+.++.  +++++.+.+++++++. +++|++||+||.+ ++|++|+|.||
T Consensus        84 a~~~Gi~~~IvmP~~tp~~Kv~~~r~~GA~Vvl~g~--~~d~a~~~a~~la~~~-g~~~i~p~~~~~~-i~G~gtig~EI  159 (499)
T TIGR01124        84 AARLGLKALIVMPETTPDIKVDAVRGFGGEVVLHGA--NFDDAKAKAIELSQEK-GLTFIHPFDDPLV-IAGQGTLALEI  159 (499)
T ss_pred             HHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEeCc--CHHHHHHHHHHHHHhc-CCEeeCCCCChHH-HHhhHHHHHHH
Confidence            999999999999999999999999999999999984  5899999999998886 7899999999998 78999999999


Q ss_pred             HHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       168 ~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++|++.++|+||+|+||||+++|++.++|+.+|+++||||..
T Consensus       160 ~~q~~~~~D~vvvpvGgGGliaGia~~lk~~~p~~kVIgVep  201 (499)
T TIGR01124       160 LRQVANPLDAVFVPVGGGGLAAGVAALIKQLMPEIKVIGVEP  201 (499)
T ss_pred             HHhCCCCCCEEEEccCccHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            999966799999999999999999999999999999999964

Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.

>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form

Probab=100.00  E-value=1.4e-47  Score=332.31  Aligned_cols=183  Identities=25%  Similarity=0.396  Sum_probs=172.3

Q ss_pred             CceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEE
Q 028372           18 TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLII   97 (210)
Q Consensus        18 TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~v   97 (210)
                      |||+++++++...|.+||+|+|++|||||||+|++.+++.++.+++.    .++|+++|+||||+++|++|+.+|++|++
T Consensus         1 TPl~~~~~ls~~~g~~i~~K~E~~~ptgS~K~R~a~~~i~~~~~~~~----~~~vv~aSsGN~g~alA~~a~~~G~~~~i   76 (380)
T TIGR01127         1 TPLIYSTTLSDITGSEVYLKLENLQKTGSFKIRGALNKIANLSEDQR----QRGVVAASAGNHAQGVAYAAKKFGIKAVI   76 (380)
T ss_pred             CCceehHHHHHHhCCeEEEEecCCCCCCCcHHHHHHHHHHhcchhcc----CCEEEEECCCHHHHHHHHHHHHcCCCEEE
Confidence            89999999998888999999999999999999999999999988875    24699999999999999999999999999


Q ss_pred             EEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhCCCCCE
Q 028372           98 VMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDA  177 (210)
Q Consensus        98 vvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~  177 (210)
                      |||+.+++.|++.++.+||+|+.++.  +++++.+.+++++++. +++|++||+|+.+ +.||+|++.||++|+ +.||+
T Consensus        77 v~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~a~~~a~~~~~~~-~~~~~~~~~~~~~-~~g~~t~~~Ei~~q~-~~~D~  151 (380)
T TIGR01127        77 VMPESAPPSKVKATKSYGAEVILHGD--DYDEAYAFATSLAEEE-GRVFVHPFDDEFV-MAGQGTIGLEIMEDI-PDVDT  151 (380)
T ss_pred             EEcCCCcHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEecCCCCChhh-hhhhHHHHHHHHHhC-CCCCE
Confidence            99999999999999999999999985  5899999999998886 7899999999998 789999999999999 47999


Q ss_pred             EEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          178 FISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       178 vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ||+|+||||+++|++.++|+.+|+++||||..
T Consensus       152 vv~~vG~Gg~~aGi~~~~k~~~p~~kvigVe~  183 (380)
T TIGR01127       152 VIVPVGGGGLISGVASAAKQINPNVKVIGVEA  183 (380)
T ss_pred             EEEEeChHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            99999999999999999999999999999964

A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.

>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia

Probab=100.00  E-value=2.4e-47  Score=323.04  Aligned_cols=188  Identities=25%  Similarity=0.324  Sum_probs=171.7

Q ss_pred             CCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEE
Q 028372           17 NTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLI   96 (210)
Q Consensus        17 ~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~   96 (210)
                      +|||+++++++...|.+||+|+|++|||||||+|++.+++.++.++|. .+ .++|+++|+||||.|+|++|+.+|++|+
T Consensus         1 ~TPl~~~~~l~~~~g~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~-~~-~~~vv~aSsGN~g~alA~~a~~~G~~~~   78 (316)
T cd06448           1 KTPLIESTALSKTAGCNVFLKLENLQPSGSFKIRGIGHLCQKSAKQGL-NE-CVHVVCSSGGNAGLAAAYAARKLGVPCT   78 (316)
T ss_pred             CCCccccchhhHhhCCeEEEEeccCCCcCChHHHHHHHHHHHHHHhhc-cc-CCeEEEeCCcHHHHHHHHHHHHcCCCEE
Confidence            699999999988778899999999999999999999999999999884 22 3679999999999999999999999999


Q ss_pred             EEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhCC--C
Q 028372           97 IVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGG--K  174 (210)
Q Consensus        97 vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--~  174 (210)
                      +|+|+.+++.|++.|+.+||+|+.++.+. ++++.+.+++++++.++++|++||+||.+ ..||.|+++||++|+++  .
T Consensus        79 iv~p~~~~~~k~~~l~~~GA~v~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~  156 (316)
T cd06448          79 IVVPESTKPRVVEKLRDEGATVVVHGKVW-WEADNYLREELAENDPGPVYVHPFDDPLI-WEGHSSMVDEIAQQLQSQEK  156 (316)
T ss_pred             EEECCCCCHHHHHHHHHcCCEEEEECCch-HHHHHHHHHHHHhccCCcEEeCCCCCchh-hccccHHHHHHHHHccccCC
Confidence            99999999999999999999999998642 66677778888777657999999999998 68889999999999975  5


Q ss_pred             CCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEEE
Q 028372          175 VDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLRV  208 (210)
Q Consensus       175 ~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv~  208 (210)
                      ||+||+|+|+||+++|++++||+.+ |+++||+|-
T Consensus       157 ~D~vv~~vG~Gg~~~Gv~~~~k~~~~~~~~ii~Ve  191 (316)
T cd06448         157 VDAIVCSVGGGGLLNGIVQGLERNGWGDIPVVAVE  191 (316)
T ss_pred             CCEEEEEeCchHHHHHHHHHHHhcCCCCCEEEEEe
Confidence            9999999999999999999999996 999999985

>PRK06381 threonine synthase; Validated

Probab=100.00  E-value=6.6e-47  Score=321.10  Aligned_cols=189  Identities=25%  Similarity=0.339  Sum_probs=174.3

Q ss_pred             hccccCCceeecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028372           12 TELIGNTPMVYLNNVVDGCV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAA   90 (210)
Q Consensus        12 ~~~~~~TPl~~~~~l~~~~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~   90 (210)
                      ...+++|||+++++++..+| .+||+|+|++|||||||+|++.+++.+++++|.     ++|+++|+||||+|+|++|+.
T Consensus        10 ~~~~g~TPL~~~~~l~~~~G~~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~-----~~lv~aSsGN~g~alA~~aa~   84 (319)
T PRK06381         10 EKPPGGTPLLRARKLEEELGLRKIYLKFEGANPTGTQKDRIAEAHVRRAMRLGY-----SGITVGTCGNYGASIAYFARL   84 (319)
T ss_pred             cccCCCCceeEhHhhHHhcCCceEEEEecCCCCccCcHHHHHHHHHHHHHHcCC-----CEEEEeCCcHHHHHHHHHHHH
Confidence            35699999999999998887 699999999999999999999999999999885     679999999999999999999


Q ss_pred             cCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCC-CC-hhHHHHHHhHHHHHH
Q 028372           91 RGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFE-NP-ANPKIHYETTGPEIW  168 (210)
Q Consensus        91 ~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-n~-~~~~~g~~t~~~Ei~  168 (210)
                      +|++|++|+|...+..|+++|+.+||+|+.++++  ++++.+.+++++++. ++|++++++ |+ .+ +.||.|+++||+
T Consensus        85 ~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~~n~~~~-~~G~~t~a~Ei~  160 (319)
T PRK06381         85 YGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGK--YEEAVERSRKFAKEN-GIYDANPGSVNSVVD-IEAYSAIAYEIY  160 (319)
T ss_pred             cCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCC--HHHHHHHHHHHHHHc-CcEecCCCCCCcchH-hhhHHHHHHHHH
Confidence            9999999999999999999999999999999964  788888899988875 789998886 77 45 689999999999


Q ss_pred             HhhCCCCCEEEEccCchhHHHHHHHHHHhc------CCCCEEEEEEe
Q 028372          169 QDSGGKVDAFISGIGTGGTVTGAGRFLKEN------NPDIKVVLRVL  209 (210)
Q Consensus       169 ~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~------~~~~~vigv~~  209 (210)
                      +|++..||+||+|+||||+++|++.+||+.      .|+++||+|..
T Consensus       161 ~ql~~~~D~vv~~vGtGgt~~Gl~~~~~~~~~~g~~~~~~~vigVe~  207 (319)
T PRK06381        161 EALGDVPDAVAVPVGNGTTLAGIYHGFRRLYDRGKTSRMPRMIGVST  207 (319)
T ss_pred             HHhCCCCCEEEEcCCccHHHHHHHHHHHHHHhCCCcCCCCEEEEEee
Confidence            999767999999999999999999999998      79999999974

>PRK02991 D-serine dehydratase; Provisional

Probab=100.00  E-value=5.3e-47  Score=331.72  Aligned_cols=202  Identities=17%  Similarity=0.270  Sum_probs=178.9

Q ss_pred             hhhhhHhhhcc----------------ccCCceeecccccCCCC--------ceEEEEeCCCCC-CCchhhHHHHHHHHH
Q 028372            4 NNAIKRDVTEL----------------IGNTPMVYLNNVVDGCV--------ARIAAKLETMEP-CSSVKDRIAYSMIKD   58 (210)
Q Consensus         4 ~~~~~~~i~~~----------------~~~TPl~~~~~l~~~~~--------~~i~~K~E~~~p-tGS~K~R~a~~~~~~   58 (210)
                      +..+++++..+                +++|||++++.++..+|        .+||+|+|++|| |||||+|++.+++..
T Consensus        46 i~~A~~~i~~~~~~~~~~~~~~~~~~~~~~TPL~~~~~l~~~~g~~~~~~~~~~V~lK~E~~np~tGSFK~RGA~~~i~~  125 (441)
T PRK02991         46 VQDAEARLKRFAPYLAKAFPETAATGGIIESPLVAIPAMQKALEKEYGQPISGRLLLKKDSHLPISGSIKARGGIYEVLK  125 (441)
T ss_pred             HHHHHHHHHhhhhhhhhhCccccccCCccCCCceehHHHHHHhcccccCCcCceEEEEEcCCCCCcCChHHHHHHHHHHH
Confidence            44566667665                89999999998886554        699999999999 999999999999875


Q ss_pred             -----HHHcCCCCCCC----------------eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCE
Q 028372           59 -----AEDKGLITPGK----------------TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE  117 (210)
Q Consensus        59 -----a~~~g~~~~~~----------------~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~  117 (210)
                           +++.|.+.++.                .+||++|+||||+|+|++|+.+|++|+||||+++++.|++.|+.+||+
T Consensus       126 l~~~~a~~~G~~~~~~~~~~l~~~~~~~~~~~~~VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAe  205 (441)
T PRK02991        126 HAEKLALEAGLLTLDDDYSKLASPEFRQFFSQYSIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVT  205 (441)
T ss_pred             hhHHHHHHhCCCCcCcchhhhcchhhhhhccCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCE
Confidence                 55778766653                479999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhCC--------CCCEEEEccCchhHHH
Q 028372          118 IILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGG--------KVDAFISGIGTGGTVT  189 (210)
Q Consensus       118 v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~pvG~Gg~~~  189 (210)
                      |+.++.  +++++.+.+++++++.+++||+++++++.. ++||+|+++||++|+++        .||+||+|+|+||+++
T Consensus       206 Vi~~~~--~~~~a~~~A~~la~~~~~~~~~~~~~~~~~-iaG~~Tig~EI~eQl~~~~~~vD~~~Pd~VvvpvGgGGlia  282 (441)
T PRK02991        206 VVEYEG--DYGVAVEEGRKAAESDPNCYFIDDENSRTL-FLGYAVAGLRLKAQLAEQGIVVDADHPLFVYLPCGVGGGPG  282 (441)
T ss_pred             EEEECC--CHHHHHHHHHHHHHhcCCeEeCCCCCchhH-HHhHHHHHHHHHHHhhhccCccccCCCCEEEEEeCccHHHH
Confidence            999996  489999999999888767899999877776 79999999999999952        2679999999999999


Q ss_pred             HHHHHHHhc-CCCCEEEEEE
Q 028372          190 GAGRFLKEN-NPDIKVVLRV  208 (210)
Q Consensus       190 Gi~~~~k~~-~~~~~vigv~  208 (210)
                      |++.+||+. +|+++||+|-
T Consensus       283 Gia~~lk~~~~~~~kVigVE  302 (441)
T PRK02991        283 GVAFGLKLAFGDHVHCFFAE  302 (441)
T ss_pred             HHHHHHHHhcCCCCEEEEEe
Confidence            999999997 7999999985

>PRK09224 threonine dehydratase; Reviewed

Probab=100.00  E-value=5e-47  Score=338.08  Aligned_cols=194  Identities=26%  Similarity=0.378  Sum_probs=179.1

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      ..++.+.+.+|||++++++++..|.+||+|+|++|||||||+|+|.+++..+.++..    .++||++|+||||+++|++
T Consensus        11 ~~~v~~~~~~TPL~~~~~Ls~~~g~~i~lK~E~lqptgSfK~RgA~n~i~~l~~~~~----~~gvV~aSaGNha~avA~a   86 (504)
T PRK09224         11 TARVYDVAQETPLEKAPKLSARLGNQVLLKREDLQPVFSFKLRGAYNKMAQLTEEQL----ARGVITASAGNHAQGVALS   86 (504)
T ss_pred             HHHhcCcCCCCCceehhHhHHHhCCEEEEEecCCCCCCCChHHHHHHHHHhhhHHhc----CCEEEEECcCHHHHHHHHH
Confidence            457889999999999999998888999999999999999999999999988754321    3679999999999999999


Q ss_pred             HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372           88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI  167 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  167 (210)
                      |+.+|++|++|||++++..|++.++.+||+|+.++.  +++++...+++++++. +++|++||+||.+ ++|++|++.||
T Consensus        87 a~~lGi~~~IvmP~~tp~~K~~~~r~~GA~Vi~~g~--~~~~a~~~a~~l~~~~-g~~~v~~f~~~~~-i~G~gTi~~EI  162 (504)
T PRK09224         87 AARLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGD--SFDEAYAHAIELAEEE-GLTFIHPFDDPDV-IAGQGTIAMEI  162 (504)
T ss_pred             HHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCCcHH-HHhHHHHHHHH
Confidence            999999999999999999999999999999999985  5899999999998886 7899999999998 78999999999


Q ss_pred             HHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       168 ~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++|+++.||+||+|+||||+++|++.++|..+|+++||||..
T Consensus       163 ~~q~~~~~D~vvvpvGgGGliaGia~~lk~~~p~~kVigVe~  204 (504)
T PRK09224        163 LQQHPHPLDAVFVPVGGGGLIAGVAAYIKQLRPEIKVIGVEP  204 (504)
T ss_pred             HHhccCCCCEEEEecChhHHHHHHHHHHHHhCCCCEEEEEEE
Confidence            999965699999999999999999999999999999999963

>PRK08813 threonine dehydratase; Provisional

Probab=100.00  E-value=1.2e-46  Score=320.82  Aligned_cols=187  Identities=24%  Similarity=0.321  Sum_probs=173.1

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++...+.+|||++++.+      +||+|+|++|||||||+|++.+++..+.++|.    .+.|+++|+||||+
T Consensus        25 ~i~~A~~~i~~~i~~TPL~~~~~l------~v~lK~E~~nptGSfK~RgA~~~l~~a~~~~~----~~~VV~aSsGN~G~   94 (349)
T PRK08813         25 DVLAAQARLRRYLSPTPLHYAERF------GVWLKLENLQRTGSYKVRGALNALLAGLERGD----ERPVICASAGNHAQ   94 (349)
T ss_pred             HHHHHHHHHhCcCCCCCeEECCCC------cEEEEecCCCCcCCCHHHHHHHHHHHHHHcCC----CCeEEEECCCHHHH
Confidence            456788999999999999998865      49999999999999999999999999999886    24699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|+||||+++++.|++.++.|||+|+.++.  +++++.+.+++++++. +++|++||+|+.+ ++||+|
T Consensus        95 alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~--~~~~a~~~a~~la~~~-g~~~v~~~~np~~-i~G~~T  170 (349)
T PRK08813         95 GVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGN--SYDEAYAFARELADQN-GYRFLSAFDDPDV-IAGQGT  170 (349)
T ss_pred             HHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEcCccCChHH-HHHHHH
Confidence            99999999999999999999999999999999999999975  5899999999999886 8999999999998 789999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +++||++|.   ||+||+|+|+||+++|++.++|+  ++++||||-
T Consensus       171 ig~EI~e~~---pD~VvvpvGgGGliaGia~~lk~--~~~rVigVq  211 (349)
T PRK08813        171 VGIELAAHA---PDVVIVPIGGGGLASGVALALKS--QGVRVVGAQ  211 (349)
T ss_pred             HHHHHHcCC---CCEEEEEeCccHHHHHHHHHHhc--CCCEEEEEE
Confidence            999999874   79999999999999999999996  579999985

>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase

Probab=100.00  E-value=8.5e-47  Score=329.33  Aligned_cols=192  Identities=20%  Similarity=0.290  Sum_probs=173.8

Q ss_pred             cccCCceeecccccCC--------CCceEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC----------
Q 028372           14 LIGNTPMVYLNNVVDG--------CVARIAAKLETMEP-CSSVKDRIAYSMIKD-----AEDKGLITPGK----------   69 (210)
Q Consensus        14 ~~~~TPl~~~~~l~~~--------~~~~i~~K~E~~~p-tGS~K~R~a~~~~~~-----a~~~g~~~~~~----------   69 (210)
                      ++++|||++++++++.        .+.+||+|+|++|| |||||+|++.+++..     +++.|.++++.          
T Consensus        67 ~~~~TPL~~~~~ls~~~~~~~~~~~~~~v~lKlE~~nP~tGSfKdRGA~~~i~~~~~~~A~~~G~l~~~~~~~~l~e~~~  146 (431)
T TIGR02035        67 GIIESPLVEIFNMQKELEKKYQQEIPGRLLLKMDSHLPISGSIKARGGIYEVLKHAEELALEAGLLKLDDDYSILAEKKF  146 (431)
T ss_pred             CccCCCccchHHHHHHhhhcccCCcCceEEEEecccCCccCCcHHHHHHHHHHHhhHHHHHHcCCCCcCcchhhhcchhh
Confidence            9999999999998763        35799999999999 999999999999874     67889877763          


Q ss_pred             ------eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCC
Q 028372           70 ------TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPD  143 (210)
Q Consensus        70 ------~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~  143 (210)
                            .+|+++|+||||+|+|++|+.+|++|+||||+++++.|++.++.+||+|+.++.  +++++.+.+++++++.++
T Consensus       147 ~~~~~~~~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~--~~~~a~~~A~~la~~~~~  224 (431)
T TIGR02035       147 KDFFSRYSIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYES--DYGVAVEEGRKNADADPM  224 (431)
T ss_pred             hhcccCceEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhcCC
Confidence                  479999999999999999999999999999999999999999999999999996  489999999999988767


Q ss_pred             eEEcCCCCCChhHHHHHHhHHHHHHHhhCC--------CCCEEEEccCchhHHHHHHHHHHhc-CCCCEEEEEE
Q 028372          144 GYLLRQFENPANPKIHYETTGPEIWQDSGG--------KVDAFISGIGTGGTVTGAGRFLKEN-NPDIKVVLRV  208 (210)
Q Consensus       144 ~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~pvG~Gg~~~Gi~~~~k~~-~~~~~vigv~  208 (210)
                      +||+++ .|+.++++||+|+++||++|+++        .||+|++|+|+||+++|++.+||+. +|+++||+|-
T Consensus       225 ~~~~d~-~n~~n~~aG~~T~g~EI~eQl~~~~~~~d~~~pd~V~vp~G~GGli~Gia~~lK~~~~~~vkvi~VE  297 (431)
T TIGR02035       225 CYFVDD-ENSRNLFLGYAVAASRLKKQFDKKGIVVDKEHPLFVYLPCGVGGGPGGVAFGLKLAFGDNVHCFFAE  297 (431)
T ss_pred             eEECCC-CCcccHHhhHHHHHHHHHHhhhccccccccCCCCEEEEEeCcCHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            888887 46666689999999999999952        4779999999999999999999997 8999999985

This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.

>PRK08246 threonine dehydratase; Provisional

Probab=100.00  E-value=1.2e-46  Score=318.22  Aligned_cols=192  Identities=26%  Similarity=0.385  Sum_probs=175.1

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..++++|.+.+++|||++++.++.. +.+||+|+|++|||||||+|++.+++..+.+ +     .++|+++|+||||+
T Consensus         9 ~i~~a~~~i~~~i~~TPl~~~~~l~~~-~~~i~~K~E~~nptGS~K~R~a~~~~~~~~~-~-----~~~vv~aSsGN~g~   81 (310)
T PRK08246          9 DVRAAAQRIAPHIRRTPVLEADGAGFG-PAPVWLKLEHLQHTGSFKARGAFNRLLAAPV-P-----AAGVVAASGGNAGL   81 (310)
T ss_pred             HHHHHHHHHhCcCCCCCeeeccccccC-CCEEEEEECCCCCCCCCHHHHHHHHHHhhcc-c-----CCeEEEeCCCHHHH
Confidence            456789999999999999999998866 7899999999999999999999999988765 2     26799999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|+..++.|+++++.+||+|+.++.  +++++.+.+++++++. +++|++||+|+.+ +.||+|
T Consensus        82 a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~~~~~~-g~~~~~~~~n~~~-i~g~~t  157 (310)
T PRK08246         82 AVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGA--EYADALEAAQAFAAET-GALLCHAYDQPEV-LAGAGT  157 (310)
T ss_pred             HHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCC--CHHHHHHHHHHHHHhc-CCEeCCCCCChhh-hcchHH
Confidence            99999999999999999999999999999999999999985  4788888898888876 8999999999998 689999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +++||++|+ +.||+||+|+|+||+++|++.+|+.   +++||+|..
T Consensus       158 ~~~Ei~eq~-~~~D~iv~~vG~GG~~~Gi~~~~~~---~~~vi~ve~  200 (310)
T PRK08246        158 LGLEIEEQA-PGVDTVLVAVGGGGLIAGIAAWFEG---RARVVAVEP  200 (310)
T ss_pred             HHHHHHHhc-CCCCEEEEecCccHHHHHHHHHhcC---CCEEEEEee
Confidence            999999999 5799999999999999999999964   489999863

>PRK06352 threonine synthase; Validated

Probab=100.00  E-value=9.3e-47  Score=323.56  Aligned_cols=191  Identities=24%  Similarity=0.288  Sum_probs=173.7

Q ss_pred             HhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372            9 RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus         9 ~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a   88 (210)
                      ++++..+++|||+++++++...|.+||+|+|++|||||||+|++.+++.++.++|.     ++||++|+||||.|+|++|
T Consensus        20 ~~~~l~~G~TPL~~~~~l~~~~g~~l~~K~E~~nptGS~KdR~a~~~i~~a~~~g~-----~~vV~aSsGN~G~AlA~~a   94 (351)
T PRK06352         20 PMISLAEGNTPLIPLPNLSKELGVTLYGKYEGLNPTGSFKDRGMVMAVAKAKEEGA-----EAVICASTGNTSAAAAAYA   94 (351)
T ss_pred             CccccCCCCCCeeEcHhhHHHhCCeEEEEecCCCCccChHHHHHHHHHHHHHHCCC-----CEEEEECCcHHHHHHHHHH
Confidence            35788999999999999988778899999999999999999999999999999885     6799999999999999999


Q ss_pred             HHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372           89 AARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI  167 (210)
Q Consensus        89 ~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  167 (210)
                      +.+|++|++|+|++ .++.|+++|+.+||+|+.++.  +++++.+.+++++++. ++++++ +.|+.+ ..||.|+++||
T Consensus        95 a~~G~~~~ivvp~~~~~~~k~~~~~a~GA~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~-~~n~~~-~~G~~t~~~EI  169 (351)
T PRK06352         95 TRAGLKAYIVIPEGKVALGKLAQAVMYGADIISIQG--NFDEALKSVRELAETE-AVTLVN-SVNPYR-LEGQKTAAFEI  169 (351)
T ss_pred             HHcCCcEEEEEeCCCCcHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhc-Cccccc-CCCccc-eeeHHHHHHHH
Confidence            99999999999997 589999999999999999996  4788888999988875 566665 568988 67899999999


Q ss_pred             HHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCC-----CEEEEEEe
Q 028372          168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPD-----IKVVLRVL  209 (210)
Q Consensus       168 ~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~-----~~vigv~~  209 (210)
                      ++|++..||+||+|+|+||+++|++++||+++|+     ++||+|..
T Consensus       170 ~~Q~~~~~D~vvv~vG~GG~~~Gi~~~lk~~~~~~~~~~~~vi~Vep  216 (351)
T PRK06352        170 CEQLGSAPDVLAIPVGNAGNISAYWKGFKEWNEAKASGLPRMHGFEA  216 (351)
T ss_pred             HHHcCCCCCEEEEECCchHHHHHHHHHHHHHHhcCCCCCCEEEEEee
Confidence            9999767999999999999999999999999887     79999863

>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate

Probab=100.00  E-value=3.3e-46  Score=317.44  Aligned_cols=191  Identities=24%  Similarity=0.257  Sum_probs=176.1

Q ss_pred             HhhhccccCCceeecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            9 RDVTELIGNTPMVYLNNVVDGCV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         9 ~~i~~~~~~TPl~~~~~l~~~~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      +++...+++|||+++++++...+ .+||+|+|++|||||||+|++.+++.++.++|.     ++|+++|+||||+|+|++
T Consensus        14 ~~~~l~~g~TPl~~~~~l~~~~g~~~i~~K~E~~nptGS~K~R~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA~~   88 (324)
T cd01563          14 DIVSLGEGNTPLVRAPRLGERLGGKNLYVKDEGLNPTGSFKDRGMTVAVSKAKELGV-----KAVACASTGNTSASLAAY   88 (324)
T ss_pred             CcccCCCCCCceeechhhHhhcCCCceEEEecCCCCcccHHHhhHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHHHH
Confidence            56888999999999999987666 799999999999999999999999999998874     679999999999999999


Q ss_pred             HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372           88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI  167 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  167 (210)
                      |+.+|++|++|+|+++++.|++.|+.+||+|+.++.  +++++.+.+++++++.  ++|++||+|+.+ ..||.|++.||
T Consensus        89 a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~--~~~~~~~~a~~~~~~~--~~~~~~~~n~~~-~~g~~t~~~Ei  163 (324)
T cd01563          89 AARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG--NFDDALRLVRELAEEN--WIYLSNSLNPYR-LEGQKTIAFEI  163 (324)
T ss_pred             HHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECC--cHHHHHHHHHHHHHhc--CeeccCCCCcce-ecchhhhHHHH
Confidence            999999999999999999999999999999999986  4788888899988875  789999999998 57999999999


Q ss_pred             HHhhCC-CCCEEEEccCchhHHHHHHHHHHhcC------CCCEEEEEEe
Q 028372          168 WQDSGG-KVDAFISGIGTGGTVTGAGRFLKENN------PDIKVVLRVL  209 (210)
Q Consensus       168 ~~q~~~-~~d~vv~pvG~Gg~~~Gi~~~~k~~~------~~~~vigv~~  209 (210)
                      ++|++. .||+||+|+||||+++|++.+||+.+      |+++||+|..
T Consensus       164 ~~q~~~~~~d~vv~~vGtGg~~~G~~~~~k~~~~~g~~~~~~~vigve~  212 (324)
T cd01563         164 AEQLGWEVPDYVVVPVGNGGNITAIWKGFKELKELGLIDRLPRMVGVQA  212 (324)
T ss_pred             HHHcCCCCCCEEEEecCCcHHHHHHHHHHHHHHhCCccccCCeEEEEec
Confidence            999963 69999999999999999999999875      6899999853

It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.

>PRK08197 threonine synthase; Validated

Probab=100.00  E-value=5.3e-46  Score=323.52  Aligned_cols=191  Identities=23%  Similarity=0.221  Sum_probs=176.4

Q ss_pred             hhhccccCCceeecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372           10 DVTELIGNTPMVYLNNVVDGCV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus        10 ~i~~~~~~TPl~~~~~l~~~~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a   88 (210)
                      .++..+++|||++++++++.+| .+||+|+|++|||||||||++.+++.+|.++|.     ++|+++|+||||.|+|++|
T Consensus        72 ~vslgeG~TPL~~~~~l~~~~G~~~l~~K~E~~nPtGSfKdRga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~~a  146 (394)
T PRK08197         72 IVSLGEGMTPLLPLPRLGKALGIGRLWVKDEGLNPTGSFKARGLAVGVSRAKELGV-----KHLAMPTNGNAGAAWAAYA  146 (394)
T ss_pred             CCccCcCCCCceEhHHHHHHhCCCcEEEEeCCCCCCcCcHHhHHHHHHHHHHHcCC-----CEEEEeCCcHHHHHHHHHH
Confidence            3788999999999999987777 599999999999999999999999999999885     6799999999999999999


Q ss_pred             HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHH
Q 028372           89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW  168 (210)
Q Consensus        89 ~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  168 (210)
                      +.+|++|+||+|+++++.|+++++.+||+|+.++++  ++++.+.+++++++. ++|+++++.||.+ ++|+.|+++||+
T Consensus       147 a~~G~~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~~--~~~~~~~a~~~~~~~-g~~~~~~~~np~~-ieG~~t~a~Ei~  222 (394)
T PRK08197        147 ARAGIRATIFMPADAPEITRLECALAGAELYLVDGL--ISDAGKIVAEAVAEY-GWFDVSTLKEPYR-IEGKKTMGLELA  222 (394)
T ss_pred             HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcccccCCCCccc-hhcHHHHHHHHH
Confidence            999999999999999999999999999999999964  788888888888776 7999999999998 689999999999


Q ss_pred             HhhCC-CCCEEEEccCchhHHHHHHHHHHhc-------CCCCEEEEEEe
Q 028372          169 QDSGG-KVDAFISGIGTGGTVTGAGRFLKEN-------NPDIKVVLRVL  209 (210)
Q Consensus       169 ~q~~~-~~d~vv~pvG~Gg~~~Gi~~~~k~~-------~~~~~vigv~~  209 (210)
                      +|+++ .||+||+|+|+|++++|++.+|+++       .+..++|+|..
T Consensus       223 eQl~~~~pD~vvvpvG~Gg~~~Gi~~~~k~~~~~g~~~~~~p~ii~Vq~  271 (394)
T PRK08197        223 EQLGWRLPDVILYPTGGGVGLIGIWKAFDELEALGWIGGKRPRLVAVQA  271 (394)
T ss_pred             HHcCCCCCCEEEEeCCChHHHHHHHHHHHHHHHcCCcCCCCCeEEEEEe
Confidence            99975 4999999999999999999999987       38899999864

>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions

Probab=100.00  E-value=4.7e-45  Score=298.87  Aligned_cols=186  Identities=40%  Similarity=0.586  Sum_probs=173.9

Q ss_pred             CceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEE
Q 028372           18 TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLII   97 (210)
Q Consensus        18 TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~v   97 (210)
                      |||+++++++...+.+||+|+|++|||||||+|++.+++..+.++|.+ ++ ..|+++|+||||.|+|++|+.+|++|++
T Consensus         1 TPl~~~~~l~~~~~~~l~~K~e~~~ptgS~K~R~a~~~l~~a~~~g~~-~~-~~vv~~ssGN~g~alA~~a~~~g~~~~v   78 (244)
T cd00640           1 TPLVRLKRLSKLGGANIYLKLEFLNPTGSFKDRGALNLILLAEEEGKL-PK-GVIIESTGGNTGIALAAAAARLGLKCTI   78 (244)
T ss_pred             CCeeEccccccccCCEEEEEecccCCcCCcHHHHHHHHHHHHHHcCCC-CC-CEEEEeCCcHHHHHHHHHHHHcCCCEEE
Confidence            899999999887778999999999999999999999999999998865 33 6799999999999999999999999999


Q ss_pred             EEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhCC-CCC
Q 028372           98 VMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGG-KVD  176 (210)
Q Consensus        98 vvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~-~~d  176 (210)
                      |+|+..++.++++|+.+|++|+.++.+  ++++.+.+++++++.++++|++||.|+.+ ..|+.++++||++|++. .||
T Consensus        79 ~~p~~~~~~~~~~~~~~Ga~v~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~n~~~-~~g~~~~~~Ei~~q~~~~~~d  155 (244)
T cd00640          79 VMPEGASPEKVAQMRALGAEVVLVPGD--FDDAIALAKELAEEDPGAYYVNQFDNPAN-IAGQGTIGLEILEQLGGQKPD  155 (244)
T ss_pred             EECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhCCCCEecCCCCCHHH-HHHHHHHHHHHHHHcCCCCCC
Confidence            999999999999999999999999975  78899999999998668999999999998 67888999999999976 599


Q ss_pred             EEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          177 AFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       177 ~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +||+|+|+||+++|++.+||+.+|+++||+|.
T Consensus       156 ~ivvp~GtGg~~~G~~~~~~~~~~~~~ii~v~  187 (244)
T cd00640         156 AVVVPVGGGGNIAGIARALKELLPNVKVIGVE  187 (244)
T ss_pred             EEEEecCccHHHHHHHHHHHHhCCCCEEEEEe
Confidence            99999999999999999999999999999985

This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy

>PRK07591 threonine synthase; Validated

Probab=100.00  E-value=1.2e-45  Score=323.33  Aligned_cols=191  Identities=18%  Similarity=0.238  Sum_probs=177.4

Q ss_pred             hhhccccCCceeecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372           10 DVTELIGNTPMVYLNNVVDGCV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus        10 ~i~~~~~~TPl~~~~~l~~~~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a   88 (210)
                      .++..+++|||++++++++.+| .+||+|+|++|||||||||++.+++..|.+.|.     ++|+++|+||||+|+|++|
T Consensus        82 ~v~l~eG~TPLv~~~~l~~~lG~~~l~~K~E~~nPtGSfKdRga~~~v~~A~~~g~-----~~vv~aSsGN~g~alA~~a  156 (421)
T PRK07591         82 PVDLGPGFTPLVKADRLARELGLKNLYIKDDSVNPTHSFKDRVVSVALTAARELGF-----TTVACASTGNLANSVAAHA  156 (421)
T ss_pred             CCcCCCCCCcceEhHHHHHHhCCCcEEEEeCCCCCccChHHHHHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHHHHH
Confidence            4788999999999999988888 599999999999999999999999999999885     6789999999999999999


Q ss_pred             HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHH
Q 028372           89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW  168 (210)
Q Consensus        89 ~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  168 (210)
                      +++|++|+||+|+++++.|+.+++.+||+|+.++++  ++++.+.+++++++.++++|++++.||.. ++|++|+++||+
T Consensus       157 a~~Gl~~~I~vP~~~~~~k~~~~~~~GA~Vi~v~g~--~d~a~~~a~~~~~~~~~~~~~n~~~~p~~-ieG~~Tia~Ei~  233 (421)
T PRK07591        157 ARAGLDSCVFIPADLEAGKIVGTLVYGPTLVAVDGN--YDDVNRLCSELANEHEGWGFVNINLRPYY-AEGSKTLGYEVA  233 (421)
T ss_pred             HHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhcCCEEEecCCCCccc-ccchHHHHHHHH
Confidence            999999999999999999999999999999999964  78899999999888767899999888987 789999999999


Q ss_pred             HhhCCC-CCEEEEccCchhHHHHHHHHHHhc-------CCCCEEEEEE
Q 028372          169 QDSGGK-VDAFISGIGTGGTVTGAGRFLKEN-------NPDIKVVLRV  208 (210)
Q Consensus       169 ~q~~~~-~d~vv~pvG~Gg~~~Gi~~~~k~~-------~~~~~vigv~  208 (210)
                      +|+++. ||+||+|+|+||+++|++.+|+++       ++.+|||+|.
T Consensus       234 eQl~~~~pD~iv~pvG~Gg~~~Gv~~g~kel~~~g~i~~~~prii~Vq  281 (421)
T PRK07591        234 EQLGWRLPDQVVAPLASGSLLTKIDKGFQELIKVGLVEDKPVRVFGAQ  281 (421)
T ss_pred             HHcCCCCCCEEEEeCCchHHHHHHHHHHHHHHhcCCccCCCceEEEEe
Confidence            999754 999999999999999999999997       6889999985

>PRK07409 threonine synthase; Validated

Probab=100.00  E-value=1.4e-45  Score=316.74  Aligned_cols=190  Identities=26%  Similarity=0.276  Sum_probs=172.0

Q ss_pred             HhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372            9 RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus         9 ~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a   88 (210)
                      ++++..+++|||++++.++...|.+||+|+|++|||||||+|++.+++..+.++|.     .+||++|+||||.|+|++|
T Consensus        23 ~~~~l~~g~TPl~~~~~l~~~~g~~i~~K~E~~nptGSfKdR~a~~~l~~a~~~g~-----~~iv~aSsGN~g~alA~~a   97 (353)
T PRK07409         23 PVVTLGEGNTPLIPAPNLSELLGVEVYVKYEGLNPTGSFKDRGMTMAVTKAKEEGA-----KAVICASTGNTSASAAAYA   97 (353)
T ss_pred             CcccCCCCCCCEEEchhhHHHhCCeEEEEecCCCCccchHHHHHHHHHHHHHHCCC-----CEEEEECCcHHHHHHHHHH
Confidence            34788999999999999987778899999999999999999999999999998875     6799999999999999999


Q ss_pred             HHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372           89 AARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI  167 (210)
Q Consensus        89 ~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  167 (210)
                      +.+|++|++|+|++ .++.|++.|+.+||+|+.+++  +++++.+.+++++++. +++++++ .|+.+ ..||.|+++||
T Consensus        98 ~~~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~~EI  172 (353)
T PRK07409         98 ARAGLKAFVLIPEGKIALGKLAQAVMYGAEIIQIDG--NFDDALEIVRELAEKY-PVTLVNS-VNPYR-IEGQKTAAFEI  172 (353)
T ss_pred             HHcCCCEEEEEcCCCCchhhHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhc-CceecCC-CCchh-hhhHHHHHHHH
Confidence            99999999999997 689999999999999999996  4889999999988876 4777775 58988 57889999999


Q ss_pred             HHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CCEEEEEE
Q 028372          168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP------DIKVVLRV  208 (210)
Q Consensus       168 ~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~------~~~vigv~  208 (210)
                      ++|++..||+||+|+|+||+++|++.+|++..+      .++||+|.
T Consensus       173 ~~q~~~~~d~iv~~vG~GG~~~Gi~~g~~~~~~~~~~~~~~kvigVe  219 (353)
T PRK07409        173 VDALGDAPDYHCIPVGNAGNITAYWKGYKEYHQDGKSTKLPRMMGFQ  219 (353)
T ss_pred             HHHhCCCCCEEEEeCCChHHHHHHHHHHHHHHHcCCccCCCeEEEEe
Confidence            999976799999999999999999999998743      48999984

>KOG1251 consensus Serine racemase [Signal transduction mechanisms; Amino acid transport and metabolism]

Probab=100.00  E-value=3.1e-46  Score=295.73  Aligned_cols=198  Identities=23%  Similarity=0.338  Sum_probs=184.6

Q ss_pred             CchhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchH
Q 028372            2 EDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTG   81 (210)
Q Consensus         2 ~~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g   81 (210)
                      .++..+++||..++..||.+.++.+.+..|.+||+|+|++|.+||||.|||.+.++.+.++..    .+.|++.||||||
T Consensus        10 ~dv~~A~~rik~~ihkTpVlTS~~ln~~~g~~vfFKcE~fQKtGaFKfRGAlNav~~l~~ek~----~kgvithSSGNHa   85 (323)
T KOG1251|consen   10 EDVRAAHQRIKPFIHKTPVLTSENLNEKVGRHVFFKCENFQKTGAFKFRGALNAVSSLKAEKR----AKGVITHSSGNHA   85 (323)
T ss_pred             HHHHHHHHHHHhhhccCceechhhHHHHhhhheEeehhhhhhccceehhhhHHHHHHhhHhhh----cCceEeecCCcHH
Confidence            456789999999999999999999999999999999999999999999999999998874433    3779999999999


Q ss_pred             HHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHH
Q 028372           82 VGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYE  161 (210)
Q Consensus        82 ~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  161 (210)
                      +|+|++|+.+|+|+++|||.++|..|...++.||++|+.+++.  .+++.+.++++.++. +.+.++||++|.. +.|++
T Consensus        86 qAlalaAk~~giPa~IVvP~~AP~~Kv~a~~~Yga~ii~~e~~--~~sRE~va~~ltee~-g~~~i~Py~~p~v-IaGqg  161 (323)
T KOG1251|consen   86 QALALAAKILGIPATIVVPKDAPICKVAATRGYGANIIFCEPT--VESRESVAKDLTEET-GYYLIHPYNHPSV-IAGQG  161 (323)
T ss_pred             HHHHHHHHhcCCCeEEEecCCChHHHHHHHHhcCceEEEecCc--cchHHHHHHHHHHhc-CcEEeCCCCCcce-eeccc
Confidence            9999999999999999999999999999999999999999974  467778899999888 8999999999997 89999


Q ss_pred             hHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          162 TTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       162 t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      |++.|++||+ +.+|++|+|+|+||+++|++.+.|...|+++|++|-
T Consensus       162 TiA~ElleqV-g~iDalfvpvgGGGllSgvAlaa~~l~P~i~vy~ve  207 (323)
T KOG1251|consen  162 TIALELLEQV-GEIDALFVPVGGGGLLSGVALAAKSLKPSIEVYAVE  207 (323)
T ss_pred             hHHHHHHHhh-CccceEEEeecCcchhhHHHHHHhccCCCcEEEEec
Confidence            9999999999 589999999999999999999999999999999973

>PRK06721 threonine synthase; Reviewed

Probab=100.00  E-value=5.9e-45  Score=312.65  Aligned_cols=192  Identities=26%  Similarity=0.298  Sum_probs=170.7

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      ..++...+++|||+++++++...|.+||+|+|++|||||||+|++.+++.++.++|.     .+||++|+||||.|+|++
T Consensus        19 ~~~~~l~~G~TPl~~l~~l~~~~g~~i~~K~E~~nptGS~KdR~a~~~i~~a~~~g~-----~~vV~aSsGN~G~alA~~   93 (352)
T PRK06721         19 TPDVSLMEGNTPLIPLLNISKQLGIQLYGKYEGANPTGSFKDRGMVMAVAKAKEEGS-----EAIICASTGNTSASAAAY   93 (352)
T ss_pred             CCccccCcCCCCeeEchhhHHHhCCeEEEEecCCCCccchHHHHHHHHHHHHHHCCC-----CEEEEECCcHHHHHHHHH
Confidence            445778899999999999987778899999999999999999999999999999885     679999999999999999


Q ss_pred             HHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372           88 AAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE  166 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  166 (210)
                      |+.+|++|++|+|+.. ++.|+++|+.+||+|+.+++  +++++.+.+++++++. ++++++ +.|+.+ ..||.|+++|
T Consensus        94 aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~-~~n~~~-~~G~~t~~~E  168 (352)
T PRK06721         94 AARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEG--NFDDALKAVRNIAAEE-PITLVN-SVNPYR-IEGQKTAAFE  168 (352)
T ss_pred             HHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhC-Cceecc-CCCchh-hhhhhhHHHH
Confidence            9999999999999974 78999999999999999985  4788888999998876 566665 568887 6789999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHH----HHHHHHhcC-CCCEEEEEEe
Q 028372          167 IWQDSGGKVDAFISGIGTGGTVTG----AGRFLKENN-PDIKVVLRVL  209 (210)
Q Consensus       167 i~~q~~~~~d~vv~pvG~Gg~~~G----i~~~~k~~~-~~~~vigv~~  209 (210)
                      |++|++..||+||+|+|+||+++|    +++++|+.+ |+++||+|..
T Consensus       169 i~eq~~~~~D~ivv~vG~GG~l~G~~~G~~~~lk~~~~~~~~vigVep  216 (352)
T PRK06721        169 ICDQLQRAPDVLAIPVGNAGNITAYWKGFCEYEKEKGYKKPRIHGFEA  216 (352)
T ss_pred             HHHHhCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEec
Confidence            999997679999999999999997    555566664 9999999863

>PRK05638 threonine synthase; Validated

Probab=100.00  E-value=4.7e-45  Score=321.66  Aligned_cols=187  Identities=21%  Similarity=0.239  Sum_probs=171.9

Q ss_pred             hhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028372           11 VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAA   90 (210)
Q Consensus        11 i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~   90 (210)
                      ++..+++|||++++ ++..+|.+||+|+|++|||||||||++.+++.+|.+.|.     ++|+++|+||||.|+|++|+.
T Consensus        60 v~l~~G~TPLv~~~-~~~~~g~~l~~K~E~~nPtGSfKdR~a~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~~aa~  133 (442)
T PRK05638         60 ISLGEGGTPLIRAR-ISEKLGENVYIKDETRNPTGSFRDRLATVAVSYGLPYAA-----NGFIVASDGNAAASVAAYSAR  133 (442)
T ss_pred             cccCCCCCcEEccc-chHHhCCeEEEEeCCCCCCCChHHHHHHHHHHHHHHcCC-----CEEEEeCCChHHHHHHHHHHH
Confidence            67899999999984 666677899999999999999999999999999998874     679999999999999999999


Q ss_pred             cCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHh
Q 028372           91 RGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQD  170 (210)
Q Consensus        91 ~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  170 (210)
                      +|++|+||||+++++.|+++++.+||+|+.+++  +++++.+.+++++++. ++|++++++||.+ ..|+.|+++||++|
T Consensus       134 ~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~--~~~~~~~~a~~~~~~~-~~~~~~~~~np~~-~eG~~t~a~Ei~eq  209 (442)
T PRK05638        134 AGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGE--SVDEAIEYAEELARLN-GLYNVTPEYNIIG-LEGQKTIAFELWEE  209 (442)
T ss_pred             cCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECC--CHHHHHHHHHHHHHhC-CeEecCCCCChhH-hhhHHHHHHHHHHH
Confidence            999999999999999999999999999999985  4889989999988775 7999999999998 78999999999999


Q ss_pred             hCCCCCEEEEccCchhHHHHHHHHHHhcCCC------CEEEEEEe
Q 028372          171 SGGKVDAFISGIGTGGTVTGAGRFLKENNPD------IKVVLRVL  209 (210)
Q Consensus       171 ~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~------~~vigv~~  209 (210)
                      ++  ||+||+|+|+||+++|++.+|+++++.      .+||+|..
T Consensus       210 ~~--pD~vv~pvG~Gg~~~Gi~~gfkel~~~g~i~~~prii~Vq~  252 (442)
T PRK05638        210 IN--PTHVIVPTGSGSYLYSIYKGFKELLEIGVIEEIPKLIAVQT  252 (442)
T ss_pred             HC--cCEEEEeCCchHHHHHHHHHHHHHHhCCcccCCCeEEEEec
Confidence            95  999999999999999999999998753      59999853

>PRK06450 threonine synthase; Validated

Probab=100.00  E-value=9.7e-45  Score=309.15  Aligned_cols=178  Identities=24%  Similarity=0.267  Sum_probs=160.3

Q ss_pred             hhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372           10 DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA   89 (210)
Q Consensus        10 ~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~   89 (210)
                      .++.++++|||++.+        +||+|+|++|||||||||++.++++.+.+.|.     ++|+++|+||+|.|+|++|+
T Consensus        51 ~vslgeG~TPLv~~~--------~l~~K~E~~nPTGSfKDRga~~~i~~a~~~g~-----~~vv~aSsGN~g~slA~~aa  117 (338)
T PRK06450         51 FISLGEGRTPLIKKG--------NIWFKLDFLNPTGSYKDRGSVTLISYLAEKGI-----KQISEDSSGNAGASIAAYGA  117 (338)
T ss_pred             CCCCCCCCCCceecC--------CEEEEecCCCCcCCCHHHHHHHHHHHHHHcCC-----CEEEEECCcHHHHHHHHHHH
Confidence            478899999999874        69999999999999999999999999998875     67999999999999999999


Q ss_pred             HcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHH
Q 028372           90 ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ  169 (210)
Q Consensus        90 ~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  169 (210)
                      .+|++|++|||+++++.|+++|+.+||+|+.++++  ++++.+.    +++. +.+|++++.||.+ ++|++|+++||++
T Consensus       118 ~~G~~~~i~vP~~~~~~k~~~i~~~GA~vi~v~~~--~~~~~~~----a~~~-g~~~~~~~~np~~-ieG~kTia~EI~e  189 (338)
T PRK06450        118 AAGIEVKIFVPETASGGKLKQIESYGAEVVRVRGS--REDVAKA----AENS-GYYYASHVLQPQF-RDGIRTLAYEIAK  189 (338)
T ss_pred             HcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHH----HHhc-CeEeccCCCCccH-HHHHHHHHHHHHH
Confidence            99999999999999999999999999999999964  5655443    4444 6789999999998 7899999999999


Q ss_pred             hhCC-CCCEEEEccCchhHHHHHHHHHHhcCCC------CEEEEEE
Q 028372          170 DSGG-KVDAFISGIGTGGTVTGAGRFLKENNPD------IKVVLRV  208 (210)
Q Consensus       170 q~~~-~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~------~~vigv~  208 (210)
                      |+++ .||+||+|+|+||+++|++++|+++.+.      .|+|+|-
T Consensus       190 ql~~~~pD~vvvpvG~Ggll~Gi~~g~~el~~~G~i~~~prii~Vq  235 (338)
T PRK06450        190 DLDWKIPNYVFIPVSAGTLLLGVYSGFKHLLDSGVISEMPKIVAVQ  235 (338)
T ss_pred             HcCCCCCCEEEEECCchHHHHHHHHHHHHHHhcCCccCCCeEEEEe
Confidence            9964 5999999999999999999999998653      6999985

>PRK06260 threonine synthase; Validated

Probab=100.00  E-value=6.4e-45  Score=317.01  Aligned_cols=191  Identities=25%  Similarity=0.264  Sum_probs=174.2

Q ss_pred             HhhhccccCCceeecccccCCCCc-eEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            9 RDVTELIGNTPMVYLNNVVDGCVA-RIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         9 ~~i~~~~~~TPl~~~~~l~~~~~~-~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      +.++..+++|||+++++++..+|. +||+|+|++|||||||||++.+++.++.++|.     ++|+++|+||||.|+|++
T Consensus        59 ~~v~l~~G~TPLv~~~~l~~~~g~~~l~~K~E~~nPTGSfKdRga~~~v~~a~~~g~-----~~vv~aSsGN~g~alA~~  133 (397)
T PRK06260         59 KIVSLNEGGTPLYRCPNLEKELGVKELYVKHEGANPTGSFKDRGMTVGVTKALELGV-----KTVACASTGNTSASLAAY  133 (397)
T ss_pred             CcccCCCCCCCeEEchhhHHHhCCCcEEEEeCCCCCCcCcHHHHHHHHHHHHHHcCC-----CEEEEeCCcHHHHHHHHH
Confidence            357889999999999999887786 99999999999999999999999999999885     679999999999999999


Q ss_pred             HHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372           88 AAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE  166 (210)
Q Consensus        88 a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  166 (210)
                      |+.+|++|++|+|++ +++.|+.+++.+||+|+.+++  +++++.+.+++++++. ++|+++++ ||.+ ..||.|+++|
T Consensus       134 aa~~G~~~~i~vP~~~~~~~k~~~~~~~GA~vi~v~~--~~~~~~~~a~~~~~~~-g~y~~~~~-np~~-~~G~~t~a~E  208 (397)
T PRK06260        134 AARAGLKCYVLLPAGKVALGKLAQALLHGAKVLEVDG--NFDDALDMVVELAKEG-KIYLLNSI-NPFR-LEGQKTIGFE  208 (397)
T ss_pred             HHHcCCcEEEEEeCCCccHHHHHHHHhcCCEEEEECC--cHHHHHHHHHHHHhhC-CEEeecCC-Cchh-hcchhhHHHH
Confidence            999999999999997 789999999999999999986  4888999999998876 78888887 8988 6899999999


Q ss_pred             HHHhhCC-CCCEEEEccCchhHHHHHHHHHHhcCC------CCEEEEEEe
Q 028372          167 IWQDSGG-KVDAFISGIGTGGTVTGAGRFLKENNP------DIKVVLRVL  209 (210)
Q Consensus       167 i~~q~~~-~~d~vv~pvG~Gg~~~Gi~~~~k~~~~------~~~vigv~~  209 (210)
                      |++|+++ .||+||+|+|+||+++|++.+||++.+      ..|+|+|..
T Consensus       209 i~eQl~~~~pd~vvvpvG~Gg~~~Gi~~~~~~l~~~G~i~~~prii~Vq~  258 (397)
T PRK06260        209 IADQLGWEVPDRVVLPVGNAGNISAIWKGFKELVELGIIDKLPKMTGIQA  258 (397)
T ss_pred             HHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHhcCCcCCCCeEEEEec
Confidence            9999975 699999999999999999999998763      369999853

>PLN02569 threonine synthase

Probab=100.00  E-value=9.5e-44  Score=314.39  Aligned_cols=193  Identities=18%  Similarity=0.142  Sum_probs=172.8

Q ss_pred             hhccccCCceeecccccCC-CC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372           11 VTELIGNTPMVYLNNVVDG-CV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus        11 i~~~~~~TPl~~~~~l~~~-~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a   88 (210)
                      ++.++++|||+++++++.. .| .+||+|+|++|||||||||++.+++..+.+.|........|+++|+||||.|+|++|
T Consensus       127 vsl~eG~TPLv~~~~l~~~~~G~~~l~~K~E~~nPTGSFKDRga~~~vs~a~~~g~~~~~~~~Vv~ASSGN~GaAlAaya  206 (484)
T PLN02569        127 VSLFEGNSNLFWAERLGKEFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMAKPVVGVGCASTGDTSAALSAYC  206 (484)
T ss_pred             eecCCCCCceeEhhhhhHhhcCCccEEEEECCCCCCcCHHHHHHHHHHHHHHHhhhccCCccEEEEeCCcHHHHHHHHHH
Confidence            7888999999999999877 77 589999999999999999999999999988765221125699999999999999999


Q ss_pred             HHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372           89 AARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI  167 (210)
Q Consensus        89 ~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  167 (210)
                      +.+|++|+||+|++ .+..|+.+|+.+||+|+.+++  +++++.+.+++++++. ++|+++++ ||.+ ++||.|+++||
T Consensus       207 a~~Gl~~~I~vP~~~~~~~k~~qi~a~GA~Vi~v~g--~~d~a~~~a~e~~~~~-~~~~~n~~-Np~~-ieG~kT~a~EI  281 (484)
T PLN02569        207 AAAGIPSIVFLPADKISIAQLVQPIANGALVLSIDT--DFDGCMRLIREVTAEL-PIYLANSL-NSLR-LEGQKTAAIEI  281 (484)
T ss_pred             HhcCCeEEEEEcCCCCCHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHHc-CCEecCCC-Ccch-hHhHHHHHHHH
Confidence            99999999999996 788999999999999999996  4899999999988876 68999988 9998 68999999999


Q ss_pred             HHhhCCC-CCEEEEccCchhHHHHHHHHHHhcC------CCCEEEEEE
Q 028372          168 WQDSGGK-VDAFISGIGTGGTVTGAGRFLKENN------PDIKVVLRV  208 (210)
Q Consensus       168 ~~q~~~~-~d~vv~pvG~Gg~~~Gi~~~~k~~~------~~~~vigv~  208 (210)
                      ++|++++ ||+||+|+|+||+++|++++||++.      +..|+|+|-
T Consensus       282 ~eQl~~~~pD~VvvPvG~Gg~l~Gi~kgfkel~~~G~i~~~Priv~Vq  329 (484)
T PLN02569        282 LQQFDWEVPDWVIVPGGNLGNIYAFYKGFKMCKELGLVDRLPRLVCAQ  329 (484)
T ss_pred             HHHcCCCCCCEEEEeCCchHHHHHHHHHHHHHHHcCCCCCCCeEEEEe
Confidence            9999764 9999999999999999999999863      345899885

>PRK08329 threonine synthase; Validated

Probab=100.00  E-value=1.1e-43  Score=304.26  Aligned_cols=181  Identities=23%  Similarity=0.288  Sum_probs=165.7

Q ss_pred             hhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028372           11 VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAA   90 (210)
Q Consensus        11 i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~   90 (210)
                      ++.+.+.|||+++.       .+||+|+|++|||||||||++.+++..+.++|.     ++|+++|+||||+|+|++|+.
T Consensus        58 ~sl~eg~Tpl~~~~-------~~l~~K~E~~nPtGSfKdRga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~~aa~  125 (347)
T PRK08329         58 PHLTPPITPTVKRS-------IKVYFKLDYLQPTGSFKDRGTYVTVAKLKEEGI-----NEVVIDSSGNAALSLALYSLS  125 (347)
T ss_pred             CcCCCCCCccccCC-------CeEEEEeCCCCCCcCCHHHHHHHHHHHHHHcCC-----CEEEEECCCcHHHHHHHHHHH
Confidence            67888999999873       389999999999999999999999999999885     679999999999999999999


Q ss_pred             cCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHh
Q 028372           91 RGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQD  170 (210)
Q Consensus        91 ~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  170 (210)
                      +|++|++|+|+++++.|+++++.+||+|+.++++  ++++...+++++++. +++|++++.||.+ ..||+|+++||++|
T Consensus       126 ~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~~~np~~-~eG~~t~~~Ei~eq  201 (347)
T PRK08329        126 EGIKVHVFVSYNASKEKISLLSRLGAELHFVEGD--RMEVHEEAVKFSKRN-NIPYVSHWLNPYF-LEGTKTIAYEIYEQ  201 (347)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCeeccCCCCchh-hccchhHHHHHHHH
Confidence            9999999999999999999999999999999964  677778888888775 6788999999998 78999999999999


Q ss_pred             hCCCCCEEEEccCchhHHHHHHHHHHhcC------CCCEEEEEE
Q 028372          171 SGGKVDAFISGIGTGGTVTGAGRFLKENN------PDIKVVLRV  208 (210)
Q Consensus       171 ~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~------~~~~vigv~  208 (210)
                      ++ .||+||+|+|+||+++|++++||++.      +..++|+|.
T Consensus       202 l~-~pD~vvvpvG~Gg~l~Gi~~g~kel~~~g~i~~~p~ii~Vq  244 (347)
T PRK08329        202 IG-VPDYAFVPVGSGTLFLGIWKGFKELHEMGEISKMPKLVAVQ  244 (347)
T ss_pred             cC-CCCEEEEeCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEe
Confidence            95 89999999999999999999999873      567999885

>PRK08206 diaminopropionate ammonia-lyase; Provisional

Probab=100.00  E-value=6.5e-44  Score=310.31  Aligned_cols=202  Identities=22%  Similarity=0.233  Sum_probs=174.2

Q ss_pred             hhhhhHhh--hccccCCceeecccccCCCC-ceEEEEeCCC-CCCCchhhHHHHHHHHHHHH--cCC-C-----------
Q 028372            4 NNAIKRDV--TELIGNTPMVYLNNVVDGCV-ARIAAKLETM-EPCSSVKDRIAYSMIKDAED--KGL-I-----------   65 (210)
Q Consensus         4 ~~~~~~~i--~~~~~~TPl~~~~~l~~~~~-~~i~~K~E~~-~ptGS~K~R~a~~~~~~a~~--~g~-~-----------   65 (210)
                      +..+.+++  ....++|||+++++++..+| .+||+|+|++ |||||||+|++.+.+..+..  .+. .           
T Consensus        29 ~~~a~~~~~~~~~~~~TPL~~~~~l~~~~G~~~v~~K~E~~q~ptgSFK~RG~~~~i~~~~~~~~~~~~~~~~~~~l~~~  108 (399)
T PRK08206         29 AKKARAFHQSFPGYAPTPLVALPDLAAELGVGSILVKDESYRFGLNAFKALGGAYAVARLLAEKLGLDISELSFEELTSG  108 (399)
T ss_pred             HHHHHHHHhcCCCCCCCCCcchHHHHHHhCCCcEEEecccCcCCCCChHHhhHHHHHHHHHHHHhCCCcccCCHHHhhhh
Confidence            44677788  55899999999999998888 6999999998 59999999999988887653  221 0           


Q ss_pred             --CC--CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhC
Q 028372           66 --TP--GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKT  141 (210)
Q Consensus        66 --~~--~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~  141 (210)
                        .+  ...+|+++|+||||+|+|++|+.+|++|+||||+++++.|++.|+.+||+|+.++.  +++++...+++++++.
T Consensus       109 ~~~~~~~~~~vv~aSsGN~g~alA~~a~~~G~~~~Ivvp~~~~~~k~~~i~~~GA~Vi~v~~--~~~~~~~~a~~~~~~~  186 (399)
T PRK08206        109 EVREKLGDITFATATDGNHGRGVAWAAQQLGQKAVIYMPKGSSEERVDAIRALGAECIITDG--NYDDSVRLAAQEAQEN  186 (399)
T ss_pred             HHHHhccCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC--CHHHHHHHHHHHHHHc
Confidence              00  01359999999999999999999999999999999999999999999999999996  4888999999988876


Q ss_pred             CCeEEcC-----CCCC-ChhHHHHHHhHHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcC--CCCEEEEEE
Q 028372          142 PDGYLLR-----QFEN-PANPKIHYETTGPEIWQDSGG---KVDAFISGIGTGGTVTGAGRFLKENN--PDIKVVLRV  208 (210)
Q Consensus       142 ~~~~~~~-----~~~n-~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~pvG~Gg~~~Gi~~~~k~~~--~~~~vigv~  208 (210)
                       +++|++     ||+| +.+.+.||.|+++||++|+++   .||+||+|+|+||+++|++.++|+++  +.++||+|-
T Consensus       187 -g~~~v~~~~~~~~~~~~~~~~~G~~t~a~EI~eQl~~~~~~pD~vvvpvG~GG~~aGi~~~~k~~~~~~~~kii~Ve  263 (399)
T PRK08206        187 -GWVVVQDTAWEGYEEIPTWIMQGYGTMADEAVEQLKEMGVPPTHVFLQAGVGSLAGAVLGYFAEVYGEQRPHFVVVE  263 (399)
T ss_pred             -CCEEecCccccCcccccHHHHHHhHHHHHHHHHHHHhcCCCCCEEEEcCCccHHHHHHHHHHHHHcCCCCCEEEEEC
Confidence             788886     6775 566688999999999999965   59999999999999999999999984  478999984

>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family

Probab=100.00  E-value=1.1e-41  Score=293.78  Aligned_cols=199  Identities=18%  Similarity=0.226  Sum_probs=169.9

Q ss_pred             hhhhHhhhccccCCceeecccccCCCC-ceEEEEeCCCCC-CCchhhHHHHHHHHHHHHc----------------CCCC
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGCV-ARIAAKLETMEP-CSSVKDRIAYSMIKDAEDK----------------GLIT   66 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~-~~i~~K~E~~~p-tGS~K~R~a~~~~~~a~~~----------------g~~~   66 (210)
                      ..++.++..+ .+|||++++.|++.+| .+||+|+|++|+ |||||+|++.+.+..+.++                +.+.
T Consensus        11 ~~~~~~~~~~-~~TPL~~~~~l~~~~g~~~v~~K~E~~~~~tgSFK~RG~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (376)
T TIGR01747        11 LAFHKKIPGY-RPTPLCALDHLANLLGLKKILVKDESKRFGLNAFKMLGGSYAIAQYLAEKLHLDIETLSFEHLKNDAIG   89 (376)
T ss_pred             HHHHHhCCCC-CCCCCcchHHHHHHhCCCcEEEeeCCCCCCCCChHHHHHHHHHHHHHHHHhCCCcccCCHHHHhhhHHH
Confidence            3456777655 8999999999998888 599999999985 8999999999999887552                1111


Q ss_pred             --CCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCe
Q 028372           67 --PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDG  144 (210)
Q Consensus        67 --~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~  144 (210)
                        .+..+|+++|+||||+|+|++|+.+|++|+||||+++++.|+..|+.+||+|+.+++  +++++.+.+++++++. ++
T Consensus        90 ~~~~~~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~--~~~~a~~~a~~~~~~~-g~  166 (376)
T TIGR01747        90 EKMGQATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDM--NYDDTVRLAMQMAQQH-GW  166 (376)
T ss_pred             hhcCCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECC--CHHHHHHHHHHHHHhc-Cc
Confidence              123679999999999999999999999999999999999999999999999999986  4888988999988876 68


Q ss_pred             EEcC-----CCCC--ChhHHHHHHhHHHHHHHhhCC----CCCEEEEccCchhHHHHHHHHHHhcC-CC-CEEEEEE
Q 028372          145 YLLR-----QFEN--PANPKIHYETTGPEIWQDSGG----KVDAFISGIGTGGTVTGAGRFLKENN-PD-IKVVLRV  208 (210)
Q Consensus       145 ~~~~-----~~~n--~~~~~~g~~t~~~Ei~~q~~~----~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~-~~vigv~  208 (210)
                      ++++     +|+|  |.. +.||+|+++||++|+++    .||+||+|+|+||+++|++.++++.. |+ ++||+|-
T Consensus       167 ~~~~~~~~~~~~~~~~~i-i~G~~Tia~Ei~eQl~~~~~~~pD~vvvpvG~GGl~~Gi~~~~~~~~~~~~p~vi~Ve  242 (376)
T TIGR01747       167 VVVQDTAWEGYEKIPTWI-MQGYATLADEAVEQLREMGSVTPTHVLLQAGVGSMAGGVLGYFVDVYSENNPHSIVVE  242 (376)
T ss_pred             EEeccccccccccCCchH-HHHHHHHHHHHHHHhhccCCCCCCEEEECCchhHHHHHHHHHHHHhcCCCCCEEEEEe
Confidence            8876     4655  443 78999999999999962    69999999999999999999998764 44 5999985

This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).

>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family

Probab=100.00  E-value=1e-41  Score=288.32  Aligned_cols=189  Identities=23%  Similarity=0.247  Sum_probs=159.4

Q ss_pred             cccCCceeecccccCCCCceEEEEeCCCCCC--CchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCchHHHHHHHHH
Q 028372           14 LIGNTPMVYLNNVVDGCVARIAAKLETMEPC--SSVKDRIAYSMIKDAEDKGLITPGKTTLIEV--TSGNTGVGLAFIAA   89 (210)
Q Consensus        14 ~~~~TPl~~~~~l~~~~~~~i~~K~E~~~pt--GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~--ssGN~g~alA~~a~   89 (210)
                      ...+|||+++++++...|.+||+|+|++||+  ||||+|++.+++.+++++|.     +.|+++  |+||||+|+|++|+
T Consensus         4 ~~~~TPl~~~~~l~~~~g~~l~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~g~-----~~vv~~g~ssGN~g~alA~~a~   78 (311)
T TIGR01275         4 IPWPTPIQYLPRISREIGAEIYIKRDDLTGLGIGGNKIRKLEYLLADALSKGA-----DTVITVGAIQSNHARATALAAK   78 (311)
T ss_pred             CCCCCcceechhhhhhcCCeEEEEeccCcCCCCCchhHHHHHHHHHHHHHcCC-----CEEEEcCCchhHHHHHHHHHHH
Confidence            4579999999999887888999999999998  99999999999999999886     678888  56999999999999


Q ss_pred             HcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH----hCC-CeEEcCCCCCChhHHHHHHhH
Q 028372           90 ARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSALRFEEILEKGEEILK----KTP-DGYLLRQFENPANPKIHYETT  163 (210)
Q Consensus        90 ~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~----~~~-~~~~~~~~~n~~~~~~g~~t~  163 (210)
                      .+|+++++|+|... +..+...++.+||+|+.++.. ++.+..+.++++++    +.+ .+++.+++.|+.+ ..|+.++
T Consensus        79 ~~G~~~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~g~~~~  156 (311)
T TIGR01275        79 KLGLDAVLVLREKEELNGNLLLDKLMGAETRVYSAE-EYFEIMKYAEELAEELEKEGRKPYVIPVGGSNSLG-TLGYVEA  156 (311)
T ss_pred             HhCCceEEEecCCccCCCCHHHHHHcCCEEEEECch-hhhhhHHHHHHHHHHHHhcCCCeEEECCCCCcHHH-HHHHHHH
Confidence            99999999999975 556777889999999999853 24444444444433    322 3456688889988 4566679


Q ss_pred             HHHHHHhhCC--CCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          164 GPEIWQDSGG--KVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       164 ~~Ei~~q~~~--~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++||++|++.  .||+||+|+|||||++|++.+||+.+|+++||||.+
T Consensus       157 ~~EI~~q~~~~~~~D~vv~~vGtGgt~~Gi~~~lk~~~~~~~vigV~~  204 (311)
T TIGR01275       157 VLEIATQLESEVKFDSIVVAAGSGGTIAGLSLGLSILNEDIRPVGVAV  204 (311)
T ss_pred             HHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence            9999999963  699999999999999999999999999999999863

This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).

>TIGR00260 thrC threonine synthase

Probab=100.00  E-value=5.2e-42  Score=292.12  Aligned_cols=188  Identities=20%  Similarity=0.178  Sum_probs=167.6

Q ss_pred             HhhhccccCCceeecccccCCCCc-eEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            9 RDVTELIGNTPMVYLNNVVDGCVA-RIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         9 ~~i~~~~~~TPl~~~~~l~~~~~~-~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      +.+...+++|||+++++++...|. +||+|+|++|||||||||++.+++..+.++|.     .+|+++|+||||.|+|++
T Consensus        15 ~~~~l~~g~TPl~~~~~l~~~~g~~~i~~K~E~~nptGSfKdR~a~~~l~~a~~~g~-----~~vv~aSsGN~g~a~A~~   89 (328)
T TIGR00260        15 DLVDLGEGVTPLFRSPALVANVGIKNLYVLELFHNPTLSFKDRGMAVALTKALELGN-----DTVLCASTGNTGAAAAAY   89 (328)
T ss_pred             hhhhhccCCccCccchHHHHhcCCccEEehhhccCCchhhHhhhHHHHHHHHHHcCC-----CEEEEeCCcHHHHHHHHH
Confidence            357778899999999998877776 99999999999999999999999999998875     679999999999999999


Q ss_pred             HHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCC--ChhHHHHHHhHH
Q 028372           88 AAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFEN--PANPKIHYETTG  164 (210)
Q Consensus        88 a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n--~~~~~~g~~t~~  164 (210)
                      |+.+|++|++++|+. .++.|++.++.+||+|+.+++  +++++.+.+++++++. +.+++++ .|  |.+ +.||.|++
T Consensus        90 a~~~g~~~~v~~p~~~~s~~k~~~~~~~GA~Vi~~~~--~~~~~~~~~~~~~~~~-~~~~~~~-~n~~~~~-~~g~~t~~  164 (328)
T TIGR00260        90 AGKAGVKVVILYPAGKISLGKLAQALGYNAEVVAIDG--NFDDAQRLVKQLFGDK-EALGLNS-VNSIPYR-LEGQKTYA  164 (328)
T ss_pred             hccCCCcEEEEECCCCCCHHHHHHHHhcCcEEEEecC--CHHHHHHHHHHHHhhc-Ceeeccc-CCCCCeE-eeeehhHH
Confidence            999999999999998 899999999999999999996  4889999999988875 4555554 44  777 67889999


Q ss_pred             HHHHHhhCC-CCCEEEEccCchhHHHHHHHHHHhc-------CCCCEEEEEE
Q 028372          165 PEIWQDSGG-KVDAFISGIGTGGTVTGAGRFLKEN-------NPDIKVVLRV  208 (210)
Q Consensus       165 ~Ei~~q~~~-~~d~vv~pvG~Gg~~~Gi~~~~k~~-------~~~~~vigv~  208 (210)
                      +||++|+++ .||+||+|+|+||+++|++.+|++.       .|  ++++|.
T Consensus       165 ~Ei~~q~~~~~~d~iv~~vG~GG~~~G~~~~~~~~~~~g~~~~p--~v~~Ve  214 (328)
T TIGR00260       165 FEAVEQLGWEAPDKVVVPVPNSGNFGAILKGFKEKKEGGLDSLP--VKRGIQ  214 (328)
T ss_pred             HHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHHHhcCCccCC--ceeEEE
Confidence            999999974 7999999999999999999999974       56  788875

Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model.

>TIGR03528 2_3_DAP_am_ly diaminopropionate ammonia-lyase

Probab=100.00  E-value=1.7e-41  Score=294.47  Aligned_cols=199  Identities=19%  Similarity=0.199  Sum_probs=166.2

Q ss_pred             hhhHhhhccccCCceeecccccCCCC-ceEEEEeCCCCC-CCchhhHHHHHHHHHHH--HcCCC--------------C-
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCV-ARIAAKLETMEP-CSSVKDRIAYSMIKDAE--DKGLI--------------T-   66 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~-~~i~~K~E~~~p-tGS~K~R~a~~~~~~a~--~~g~~--------------~-   66 (210)
                      ..+.++. .+.+|||++++.|+..+| .+||+|+|++|+ |||||+|++.+.+..+.  +.|..              . 
T Consensus        31 ~~~~~~~-~~~~TPL~~~~~L~~~~g~~~v~lK~E~~q~~tGSFK~RGa~~~v~~l~~~~~g~~~~~~~~~~l~~~~~~~  109 (396)
T TIGR03528        31 AFHQSFP-GYQPTPLAELDNLAKHLGVGSILVKDESYRFGLNAFKVLGGSYAIGKYLAEKLGKDISELSFEKLKSNEIRE  109 (396)
T ss_pred             HHHhcCC-CCcCCCCcchHHHHHHhCCCcEEEeeCCCCCCcCChHHHHHHHHHHHHHHHHhCCCcccccHHHhhhHHHHh
Confidence            4455554 458999999999998888 699999999985 99999999999998753  22210              0 


Q ss_pred             -CCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeE
Q 028372           67 -PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGY  145 (210)
Q Consensus        67 -~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~  145 (210)
                       .+..+|+++|+||||+|+|++|+.+|++|+||||+++++.|++.|+.+||+|+.++.  +++++.+.+++++++. +++
T Consensus       110 ~~~~~~vv~aSsGN~g~alA~~aa~~Gi~~~IvvP~~~~~~K~~~ir~~GAeVi~~~~--~~~~a~~~a~~~a~~~-g~~  186 (396)
T TIGR03528       110 KLGDITFVTATDGNHGRGVAWAANQLGQKSVVYMPKGSAQIRLENIRAEGAECTITDL--NYDDAVRLAWKMAQEN-GWV  186 (396)
T ss_pred             hccCcEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhc-CcE
Confidence             012379999999999999999999999999999999999999999999999999985  4888999999998876 788


Q ss_pred             EcC-----CCCCCh-hHHHHHHhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhc-CCCC-EEEEEE
Q 028372          146 LLR-----QFENPA-NPKIHYETTGPEIWQDSG----GKVDAFISGIGTGGTVTGAGRFLKEN-NPDI-KVVLRV  208 (210)
Q Consensus       146 ~~~-----~~~n~~-~~~~g~~t~~~Ei~~q~~----~~~d~vv~pvG~Gg~~~Gi~~~~k~~-~~~~-~vigv~  208 (210)
                      |++     +|+|.. ..+.||.|+++||++|++    +.||+||+|+|+||+++|++.++++. .+++ +||+|-
T Consensus       187 ~v~~~~~~~~~~~~~~~i~G~~Tig~EI~eQl~~~~~~~pD~vvvpvG~Ggl~~gi~~~~~~~~~~~~p~vi~Ve  261 (396)
T TIGR03528       187 MVQDTAWEGYEKIPTWIMQGYGTLALEALEQLKEQGVEKPTHVFLQAGVGSFAGAVQGYFASAYGEERPITVIVE  261 (396)
T ss_pred             eeccccccccccCchHHHHHHhHHHHHHHHHHhhcCCCCCCEEEEcCCcchHHHHHHHHHHHhcCCCCCEEEEEc
Confidence            885     676632 235799999999999996    26999999999999999999999554 5554 899884

Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate.

>PRK03910 D-cysteine desulfhydrase; Validated

Probab=100.00  E-value=3.5e-41  Score=287.30  Aligned_cols=197  Identities=22%  Similarity=0.211  Sum_probs=167.2

Q ss_pred             hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCC--CchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CCchHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPC--SSVKDRIAYSMIKDAEDKGLITPGKTTLIEVT--SGNTGV   82 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~pt--GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~s--sGN~g~   82 (210)
                      -++++...+++|||++++.+++..|.+||+|+|++||+  ||||+|++.+++.++.++|.     ++||+++  +||||+
T Consensus         5 ~~~~~~~~~~~TPl~~~~~l~~~~g~~i~~K~E~lnp~g~gs~K~R~~~~~l~~a~~~g~-----~~vvt~g~s~gN~g~   79 (331)
T PRK03910          5 RFPRLELAGLPTPLEPLPRLSAALGPDIYIKRDDLTGLALGGNKTRKLEFLLADALAQGA-----DTLITAGAIQSNHAR   79 (331)
T ss_pred             cCCCccccCCCCCceEhhhhhHhhCCcEEEEeccCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCcchhHHHH
Confidence            35667889999999999999887788999999999997  59999999999999998885     5678764  489999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCH--------HHHHHHHHcCCEEEEECCCCCHHH-HHHHHHHHHHhCCCeE-EcCCCCC
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSM--------ERRIVLRALGAEIILADSALRFEE-ILEKGEEILKKTPDGY-LLRQFEN  152 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~--------~~~~~~~~~Ga~v~~v~~~~~~~~-~~~~a~~~~~~~~~~~-~~~~~~n  152 (210)
                      |+|++|+.+|++|++|+|+..+.        .+++.|+.+||+|+.++.+++..+ +...++++.++.+..| +.+++.|
T Consensus        80 alA~~a~~~G~~~~i~vp~~~~~~~~~~~~~~~~~~~~~~Ga~vi~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~  159 (331)
T PRK03910         80 QTAAAAAKLGLKCVLLLENPVPTEAENYLANGNVLLDDLFGAEIHVVPAGTDMDAQLEELAEELRAQGRRPYVIPVGGSN  159 (331)
T ss_pred             HHHHHHHHhCCcEEEEEcCCCCcccccccCCCcHHHHHHcCCEEEEeCccchHHHHHHHHHHHHHHcCCceEEECCCCCC
Confidence            99999999999999999998765        566899999999999987533333 3455666666553333 4567888


Q ss_pred             ChhHHHHHHhHHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          153 PANPKIHYETTGPEIWQDSGG---KVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       153 ~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +.+ ..|+.+++.||++|++.   .||+||+|+|||||++|++.+||+.+|+++||||..
T Consensus       160 ~~~-~~g~~~~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~  218 (331)
T PRK03910        160 ALG-ALGYVACALEIAQQLAEGGVDFDAVVVASGSGGTHAGLAAGLAALGPDIPVIGVTV  218 (331)
T ss_pred             chh-HHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence            988 56888999999999963   699999999999999999999999999999999864

>PRK14045 1-aminocyclopropane-1-carboxylate deaminase; Provisional

Probab=100.00  E-value=2.7e-41  Score=287.72  Aligned_cols=199  Identities=19%  Similarity=0.190  Sum_probs=165.9

Q ss_pred             hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCC--CchhhHHHHHHHHHHHHcCCCCCCCeEEE--eeCCCch
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPC--SSVKDRIAYSMIKDAEDKGLITPGKTTLI--EVTSGNT   80 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~pt--GS~K~R~a~~~~~~a~~~g~~~~~~~~vv--~~ssGN~   80 (210)
                      ++-++++....++|||+++++++...|.+||+|+|++||+  ||||+|++.+++.++.++|.     ++|+  ++|+|||
T Consensus         9 ~~~~~~~~l~~~~TPl~~~~~l~~~~g~~v~~K~E~l~~~~~gg~K~R~~~~~l~~a~~~G~-----~~vv~~~~ssGN~   83 (329)
T PRK14045          9 LSKFPRVELIPWETPIQYLPNISRELGADVYVKRDDLTGLGIGGNKIRKLEYLLGDALSRGA-----DVVITVGAVHSNH   83 (329)
T ss_pred             hhcCCCcccCCCCCCcccchhhHHHhCCeEEEEcccccCCCCCcchHHHHHhHHHHHHHcCC-----CEEEEeCccHHHH
Confidence            4456789999999999999999877788999999999997  89999999999999999886     4565  6899999


Q ss_pred             HHHHHHHHHHcCCcEEEEEcCCCCHH-HHHHHHHcCCEEEEECCCCC---HHHHHHHHHHHHHhCCCeEE-cCCCCCChh
Q 028372           81 GVGLAFIAAARGYNLIIVMPSTCSME-RRIVLRALGAEIILADSALR---FEEILEKGEEILKKTPDGYL-LRQFENPAN  155 (210)
Q Consensus        81 g~alA~~a~~~g~~~~vvvp~~~~~~-~~~~~~~~Ga~v~~v~~~~~---~~~~~~~a~~~~~~~~~~~~-~~~~~n~~~  155 (210)
                      |+|+|++|+.+|++|++|+|...+.. +...++.+||+++.++...+   .+.+.+.+++++++.+..|+ .+++.|+.+
T Consensus        84 g~alA~~a~~~G~~~~ivvp~~~~~~~~~~l~~~~Ga~v~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~~~n~~~  163 (329)
T PRK14045         84 AFVTGLAAKKLGLDAVLVLRGKEELKGNYLLDKIMGIETRVYEAKDSFELMKYAEEVAEELKGEGRKPYIIPPGGASPVG  163 (329)
T ss_pred             HHHHHHHHHHcCCeEEEEEeCCCCCCcCHHHHHHCCCEEEEECCCcccchHHHHHHHHHHHHhcCCCEEEECCCCCchhH
Confidence            99999999999999999999875443 66678999999998874322   33556667777666545555 566788888


Q ss_pred             HHHHHHhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          156 PKIHYETTGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       156 ~~~g~~t~~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +..++. ...||++|++   .++|+||+|+|||||++|++.++|..+|+++||||.+
T Consensus       164 ~~g~~~-~~~EI~~q~~~~~~~~d~vv~~vGtGGt~aGi~~~lk~~~~~~kVigv~~  219 (329)
T PRK14045        164 TLGYVR-AVGEIATQVKKLGVRFDSIVVAVGSGGTLAGLSLGLAILNAEWRVVGIAV  219 (329)
T ss_pred             HHHHHH-HHHHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence            554444 4459999996   3699999999999999999999999999999999975

>KOG1481 consensus Cysteine synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=5.6e-42  Score=276.07  Aligned_cols=197  Identities=42%  Similarity=0.669  Sum_probs=174.2

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      .+-+...+++|||+++.+|+...|++|+.|.|.+||.||.|||.|.+++..|+|.|+|.+| -.|++.|+||+|.++|..
T Consensus        40 ~~Gv~~~IGnTpliri~sLs~aTGcnIlaK~Ef~NPggS~KDRvAl~iir~Aee~GkL~~g-g~v~EGtaGsTgIslA~v  118 (391)
T KOG1481|consen   40 VSGVEGAIGNTPLIRINSLSNATGCNILAKAEFLNPGGSVKDRVALYIIRTAEEKGKLVRG-GTVVEGTAGSTGISLAHV  118 (391)
T ss_pred             cchhHHhhCCCceEEeeccccccccchhhhhhccCCCCChhhhhHHHHHHHHHHcCCcccC-ceEEecCCCccchhHHHh
Confidence            3467788999999999999999999999999999999999999999999999999999998 679999999999999999


Q ss_pred             HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCC--CHHHHHHHHHHHHHhCC------CeEEcCCCCCChhHHHH
Q 028372           88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL--RFEEILEKGEEILKKTP------DGYLLRQFENPANPKIH  159 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~--~~~~~~~~a~~~~~~~~------~~~~~~~~~n~~~~~~g  159 (210)
                      |..+|++|+++||++.+.+|.+.++.+||+|+.|++..  +-..-...|++.+.+.+      ..+|-+||+|++||..|
T Consensus       119 ~~a~Gyk~~I~mPddqs~eK~~ile~LGA~V~rV~pa~i~dp~~yvn~Arr~an~~~~~~ngi~g~fAdQFeN~AN~~aH  198 (391)
T KOG1481|consen  119 ARALGYKCHIYMPDDQSQEKSDILEFLGAEVHRVPPAPIVDPNHYVNQARRAANETPNASNGIRGWFADQFENVANWLAH  198 (391)
T ss_pred             hhhcCcceEEECCChHHHHHHHHHHHhcceeeecCCcCccChhHHHHHHHHHhhhcccccCCcccchhhhhcCHHHHHHH
Confidence            99999999999999999999999999999999988631  11222334444444432      24778999999999999


Q ss_pred             HHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCC-CEEE
Q 028372          160 YETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPD-IKVV  205 (210)
Q Consensus       160 ~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~-~~vi  205 (210)
                      |.++|+||+.|.++++|++++.+|||||++|++++||+..+. +.++
T Consensus       199 yetTGPEIw~QtkGniDaFia~~GTGGTiaGVskyLkek~~~~v~~~  245 (391)
T KOG1481|consen  199 YETTGPEIWHQTKGNIDAFIAGTGTGGTIAGVSKYLKEKSDGRVAVF  245 (391)
T ss_pred             hcCcCcHHHHhhcCCcceEEeccCCCcchHHHHHHHhhcCCCceEEE
Confidence            999999999999999999999999999999999999998765 5544

>TIGR00263 trpB tryptophan synthase, beta subunit

Probab=100.00  E-value=7.2e-41  Score=290.14  Aligned_cols=196  Identities=20%  Similarity=0.212  Sum_probs=159.5

Q ss_pred             Hhhhcccc-CCceeecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372            9 RDVTELIG-NTPMVYLNNVVDGCV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus         9 ~~i~~~~~-~TPl~~~~~l~~~~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      +.+..+++ +|||++++++++.+| .+||+|+|++|||||||+|++..++..+.+.|.    ...|+++|+||||+|+|+
T Consensus        41 ~~~~~~~~~~TPL~~~~~l~~~~g~~~iy~K~E~~nptGS~K~R~a~~~~~~a~~~g~----~~vi~e~ssGN~G~alA~  116 (385)
T TIGR00263        41 ELLRNYAGRPTPLTFAPNLTEALGGAKIYLKREDLNHTGAHKINNALGQALLAKRMGK----KRIIAETGAGQHGVATAT  116 (385)
T ss_pred             HHHHHhCCCCCCceehHHHHHHhCCCeEEEEeCCCCCCccchHHHHHHHHHHHHHcCC----CEEEEEcCcHHHHHHHHH
Confidence            33455554 899999999998877 799999999999999999999999999988874    245667999999999999


Q ss_pred             HHHHcCCcEEEEEcCC-CCH--HHHHHHHHcCCEEEEECCC-CCHHHHH-HHHHHHHHhCCCeEEc-CCCCC----ChhH
Q 028372           87 IAAARGYNLIIVMPST-CSM--ERRIVLRALGAEIILADSA-LRFEEIL-EKGEEILKKTPDGYLL-RQFEN----PANP  156 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~-~~~--~~~~~~~~~Ga~v~~v~~~-~~~~~~~-~~a~~~~~~~~~~~~~-~~~~n----~~~~  156 (210)
                      +|+.+|++|+||+|+. .+.  .++++|+.+||+|+.++.. +.++++. +.+++++++.++.+|+ .++.|    +.++
T Consensus       117 ~a~~~Gl~~~Iv~p~~~~~~~~~~~~~~~~~GA~Vv~v~~~~~~~~~a~~~~~~~~~~~~~~~~y~~~~~~~~~p~~~~~  196 (385)
T TIGR00263       117 AAALLGLDCEVYMGAEDVERQKPNVFRMELLGAKVIPVTSGSGTLKDAVNEALRDWVTSVDDTHYVLGSAVGPHPFPTMV  196 (385)
T ss_pred             HHHHcCCCEEEEecCCcccccchHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHHHhcCCceEEeCCcCCCCCchHHH
Confidence            9999999999999985 343  6788999999999999853 4467764 4445556554455555 44443    3555


Q ss_pred             HHHHHhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          157 KIHYETTGPEIWQDSG----GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       157 ~~g~~t~~~Ei~~q~~----~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ..|++|++.||++|+.    ..||+||+|+|+||+++|++.++.+ .|+++||||..
T Consensus       197 ~~~~~t~g~Ei~~Ql~~~~~~~pD~vv~~vG~Gg~~~Gv~~~~~~-~~~~~iigVe~  252 (385)
T TIGR00263       197 RDFQSVIGEEAKEQILEQEGRLPDAVIACVGGGSNAIGIFYAFID-DPSVQLIGVEA  252 (385)
T ss_pred             HHHhhHHHHHHHHHHHhhhCCCCCEEEEEeCchHHHHHHHHHHhh-CCCCeEEEEEe
Confidence            6899999999999983    2589999999999999999998855 69999999964

Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. the beta chain contains the functional domain for or the synthesis of tryptophan from indole and serine. The enzyme requires pyridoxal-phosphate as a cofactor. The pyridoxal-P attachment site is contained within the conserved region [LIVM]-x-H-x-G-[STA]-H-K-x-N] [K is the pyridoxal-P attachment site] which is present between residues 90-100 of the model.

>PRK13028 tryptophan synthase subunit beta; Provisional

Probab=100.00  E-value=1.3e-40  Score=288.17  Aligned_cols=194  Identities=20%  Similarity=0.180  Sum_probs=161.1

Q ss_pred             hhcccc-CCceeecccccCCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372           11 VTELIG-NTPMVYLNNVVDGC-VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus        11 i~~~~~-~TPl~~~~~l~~~~-~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a   88 (210)
                      ..++++ +|||++++++++.+ +.+||+|+|++|||||||+|.+..++..+++.|+    ...|+++|+||||+|+|++|
T Consensus        55 ~~~~~g~pTPL~~~~~Ls~~~Gg~~IylK~EdlnptGS~K~r~al~~~l~A~~~G~----~~vI~etgsGnhG~A~A~aa  130 (402)
T PRK13028         55 LKHYVGRPTPLYHAKRLSEELGGAQIYLKREDLNHTGAHKINNCLGQALLAKRMGK----KRLIAETGAGQHGVATATAA  130 (402)
T ss_pred             HHHhCCCCCCeeehHHhHhhcCCCeEEEEECCCCCCcchHHHHHHHHHHHHHHcCC----CeEEEecCcHHHHHHHHHHH
Confidence            456676 79999999999888 5899999999999999999999999999999885    24566799999999999999


Q ss_pred             HHcCCcEEEEEcCCCCH---HHHHHHHHcCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEEcCC-C----CCChhHHH
Q 028372           89 AARGYNLIIVMPSTCSM---ERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYLLRQ-F----ENPANPKI  158 (210)
Q Consensus        89 ~~~g~~~~vvvp~~~~~---~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~~~~-~----~n~~~~~~  158 (210)
                      +.+|++|+||||+....   .++.+|+.+||+|+.++. ..+++++.+.+.+ +.++.++.+|+.+ .    ..|.++..
T Consensus       131 a~~Gl~~~I~m~~~d~~~q~~nv~~mr~~GAeVi~v~~g~~~~~~a~~~a~~~~~~~~~~~~y~~~s~~gp~p~p~~v~~  210 (402)
T PRK13028        131 ALFGLECEIYMGEVDIERQHPNVFRMKLLGAEVVPVTRGGRTLKEAVDSAFEDYLKDPDNTHYAIGSVVGPHPFPMMVRD  210 (402)
T ss_pred             HHcCCCEEEEECCCcchhhHHHHHHHHHcCCEEEEEcCCCCCHHHHHHHHHHHHHHhcCCcEEEecCcCCCCCcHHHHHH
Confidence            99999999999986433   578899999999999984 3468888887754 4555345666632 2    12444456


Q ss_pred             HHHhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          159 HYETTGPEIWQDSG----GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       159 g~~t~~~Ei~~q~~----~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      |+++++.||.+|+.    ..||+||+|+|+||+++|++.+|++ .|+++||||..
T Consensus       211 ~q~tig~Ei~~Q~~~~~g~~pD~vV~~VGgGg~~~Gi~~~f~~-~~~v~iigVE~  264 (402)
T PRK13028        211 FQSVIGEEAREQFLEMTGRLPDAVVACVGGGSNAIGLFSAFLD-DESVRLVGVEP  264 (402)
T ss_pred             HhHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHHHh-CCCceEEEEec
Confidence            99999999999973    3699999999999999999999986 49999999963

>PRK04346 tryptophan synthase subunit beta; Validated

Probab=100.00  E-value=8.8e-41  Score=288.87  Aligned_cols=194  Identities=19%  Similarity=0.221  Sum_probs=159.6

Q ss_pred             hhcccc-CCceeecccccCCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372           11 VTELIG-NTPMVYLNNVVDGC-VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus        11 i~~~~~-~TPl~~~~~l~~~~-~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a   88 (210)
                      ..++++ +|||+++++|++.+ +.+||+|+|++|||||||+|++...+..|++.|+    +..|+++|+||||+|+|++|
T Consensus        51 ~~~~~grpTPL~~~~~Ls~~~gg~~IylK~EdlnptGS~K~r~al~~~l~A~~~Gk----~~vIaetgaGnhG~A~A~~a  126 (397)
T PRK04346         51 LKNYVGRPTPLYFAERLSEHLGGAKIYLKREDLNHTGAHKINNVLGQALLAKRMGK----KRIIAETGAGQHGVATATAA  126 (397)
T ss_pred             HHHhcCCCCCceEhHHHHHHcCCCeEEEEECCCCCccchHHHHHHHHHHHHHHcCC----CeEEEecCcHHHHHHHHHHH
Confidence            456676 59999999999888 5899999999999999999999999999999885    34566689999999999999


Q ss_pred             HHcCCcEEEEEcCCC-C--HHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEEc-CCCCC----ChhHHH
Q 028372           89 AARGYNLIIVMPSTC-S--MERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYLL-RQFEN----PANPKI  158 (210)
Q Consensus        89 ~~~g~~~~vvvp~~~-~--~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~n----~~~~~~  158 (210)
                      +++|++|+||||+.. +  ..++.+|+.+||+|+.++. ..+++++.+.+.+ +.++.++.+|+ .++.+    |.++..
T Consensus       127 a~~Gl~c~I~mp~~d~~rq~~nv~~m~~lGA~Vv~v~~g~~~l~da~~ea~~~~~~~~~~~~y~~gs~~gphp~p~~v~~  206 (397)
T PRK04346        127 ALLGLECVIYMGAEDVERQALNVFRMKLLGAEVVPVTSGSRTLKDAVNEALRDWVTNVEDTHYLIGSVAGPHPYPTMVRD  206 (397)
T ss_pred             HHcCCcEEEEecCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCCeEEeCCcCCCCCchHHHHH
Confidence            999999999999853 3  3677889999999999984 3467777665544 45553355555 33322    344456


Q ss_pred             HHHhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          159 HYETTGPEIWQDSG----GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       159 g~~t~~~Ei~~q~~----~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ||+|++.||.+|+.    ..||+||+|+|+||+++|++.+|++ .|++++|||-.
T Consensus       207 ~q~tig~Ei~eQ~~~~~g~~pD~vVa~VGgGg~~~Gi~~~f~~-~~~v~iigVE~  260 (397)
T PRK04346        207 FQSVIGEEAKAQILEKEGRLPDAVVACVGGGSNAIGIFHPFID-DESVRLIGVEA  260 (397)
T ss_pred             hcchHHHHHHHHHHHhhCCCCCEEEEecCccHhHHHHHHHHhh-CCCCeEEEEec
Confidence            99999999999984    3699999999999999999999965 89999999963

>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional

Probab=100.00  E-value=3e-40  Score=300.49  Aligned_cols=194  Identities=19%  Similarity=0.213  Sum_probs=166.0

Q ss_pred             hhcccc-CCceeecccccCC----CC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028372           11 VTELIG-NTPMVYLNNVVDG----CV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG   83 (210)
Q Consensus        11 i~~~~~-~TPl~~~~~l~~~----~~--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~a   83 (210)
                      ..+++| +|||+++++|+..    +|  .+||+|+|++|||||||+|++.+++..+.+.|+    .+.|+++|+||||+|
T Consensus       319 ~~~~iGrpTPL~~~~~Ls~~l~~~~G~g~~IylK~E~lNpTGS~KdR~Al~~i~~A~~~G~----~~~IvetssGNhG~A  394 (695)
T PRK13802        319 NQRYVGRPSPLTEAPRFAERVKEKTGLDARVFLKREDLNHTGAHKINNALGQALLVKRMGK----TRVIAETGAGQHGVA  394 (695)
T ss_pred             HHhcCCCCCceeEchhhhhhhHhhcCCCceEEEEEccCCCcCCcHHHHHHHHHHHHHHcCC----CCEEEEECcHHHHHH
Confidence            467888 9999999998743    44  799999999999999999999999999999986    357889999999999


Q ss_pred             HHHHHHHcCCcEEEEEcCC---CCHHHHHHHHHcCCEEEEECC-CCCHHHHHHHH-HHHHHhCC-CeEEcCCCCCC----
Q 028372           84 LAFIAAARGYNLIIVMPST---CSMERRIVLRALGAEIILADS-ALRFEEILEKG-EEILKKTP-DGYLLRQFENP----  153 (210)
Q Consensus        84 lA~~a~~~g~~~~vvvp~~---~~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a-~~~~~~~~-~~~~~~~~~n~----  153 (210)
                      +|++|+.+|++|+||||+.   .+..|+.+|+.+||+|+.++. +.+++++.+.+ +++.++.+ .+|+++++.|+    
T Consensus       395 lA~aaA~~Gl~c~Ivmp~~~~~~~~~nv~~mr~lGAeVi~v~~g~~~l~~Ai~ea~~~~~~~~~~~~y~i~~~~g~~P~p  474 (695)
T PRK13802        395 TATVCAMLGLKCRIYMGQIDARRQALNVARMRMLGAEVVEVTLGDRILKDAINEALRDWVTNVKDTHYLLGTVAGPHPFP  474 (695)
T ss_pred             HHHHHHHcCCCEEEEEeCCcccccHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHHHhcCCceEeecccCCCCCcH
Confidence            9999999999999999985   367899999999999999984 33677876555 55666533 45778888654    


Q ss_pred             hhHHHHHHhHHHHHHHhhCC-----CCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          154 ANPKIHYETTGPEIWQDSGG-----KVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       154 ~~~~~g~~t~~~Ei~~q~~~-----~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      .++..|+.|+|.||++|+..     .||+||+|+||||+++|++.+|++ .|++++|||..
T Consensus       475 ~~v~agq~tiG~EI~eQ~~~~~g~~~pD~VVa~VGgGg~~~Gi~~~f~~-~~~vkligVE~  534 (695)
T PRK13802        475 AMVRDFQKIIGEEAKQQLQDWYGIDHPDAICACVGGGSNAIGVMNAFLD-DERVNLYGYEA  534 (695)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEEcCCchHHHHHHHHHHHh-CCCceEEEEEe
Confidence            34568999999999999952     699999999999999999999976 69999999964

>PLN02618 tryptophan synthase, beta chain

Probab=100.00  E-value=2.8e-40  Score=286.34  Aligned_cols=198  Identities=19%  Similarity=0.252  Sum_probs=160.5

Q ss_pred             hhHhhhcccc-CCceeecccccCCC------CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCc
Q 028372            7 IKRDVTELIG-NTPMVYLNNVVDGC------VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGN   79 (210)
Q Consensus         7 ~~~~i~~~~~-~TPl~~~~~l~~~~------~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN   79 (210)
                      ....+.++++ +|||+++++|++.+      |.+||+|+|++|||||||+|.+...+..|++.|+    ...|+++|+||
T Consensus        55 ~~~~l~~~vGr~TPL~~~~~Ls~~~g~~~~~g~~IylK~E~lnptGS~K~R~a~~~~l~A~~~g~----~~vIaesgaGN  130 (410)
T PLN02618         55 LAGILKDYVGRETPLYFAERLTEHYKRADGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRLGK----KRIIAETGAGQ  130 (410)
T ss_pred             HHHHHHHhcCCCCceeEhhhHHHHhccccCCCCEEEEEeCCCCCccchHHHHHHHHHHHHHHcCC----CEEEEEcCcHH
Confidence            3455678885 89999999999766      4899999999999999999999999999988775    24455667999


Q ss_pred             hHHHHHHHHHHcCCcEEEEEcCCC---CHHHHHHHHHcCCEEEEECC-CCCHHHHHH-HHHHHHHhCCCeEEc-CCCC--
Q 028372           80 TGVGLAFIAAARGYNLIIVMPSTC---SMERRIVLRALGAEIILADS-ALRFEEILE-KGEEILKKTPDGYLL-RQFE--  151 (210)
Q Consensus        80 ~g~alA~~a~~~g~~~~vvvp~~~---~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~-~a~~~~~~~~~~~~~-~~~~--  151 (210)
                      ||+|+|++|+.+|++|+||||+..   +..|+.+|+.+||+|+.++. +.+++++.. .+++++++.++.+|+ .+..  
T Consensus       131 hG~AlA~aaa~~Gl~~~I~m~~~~~~~~~~nv~~mr~lGA~Vi~v~~g~~~~~dA~~ea~~~~~~~~~~~~yi~gs~~gp  210 (410)
T PLN02618        131 HGVATATVCARFGLECIVYMGAQDMERQALNVFRMRLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGP  210 (410)
T ss_pred             HHHHHHHHHHHcCCcEEEEEcCCchhhhhhhHHHHHHCCCEEEEEeCCCCCHHHHHHHHHHHHHhccCCCEEEecCcCCC
Confidence            999999999999999999999853   35677799999999999964 456888874 445676664455666 2221  


Q ss_pred             C--ChhHHHHHHhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          152 N--PANPKIHYETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       152 n--~~~~~~g~~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +  +.....++.+++.||.+|+    +..||+||+|+|+||+++|++.+|+. .|+++||||..
T Consensus       211 ~P~~~~v~~~q~tig~Ei~~Q~~~~~g~~pD~VV~~VGgGg~~~Gi~~~f~~-~~~v~ligVEa  273 (410)
T PLN02618        211 HPYPMMVRDFHSVIGKETRRQAMEKWGGKPDVLVACVGGGSNAMGLFHEFID-DEDVRLIGVEA  273 (410)
T ss_pred             CCCHHHHHHhhHHHHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHHh-CCCceEEEEEe
Confidence            2  2334579999999998776    34699999999999999999999965 79999999964

>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=100.00  E-value=3e-40  Score=278.06  Aligned_cols=189  Identities=37%  Similarity=0.487  Sum_probs=158.5

Q ss_pred             hhccccCCceeecc--cccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372           11 VTELIGNTPMVYLN--NVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus        11 i~~~~~~TPl~~~~--~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a   88 (210)
                      |+..+++|||++++  .++...+.+||+|+|++|||||||+|++.+++.+++++|.     ++|+++|+||||.|+|++|
T Consensus         1 i~~~~~~TPl~~~~~~~~~~~~~~~i~~K~E~~~ptgs~K~R~a~~~l~~a~~~~~-----~~vv~assGN~g~a~A~~a   75 (306)
T PF00291_consen    1 ISLGIGPTPLVRLPSRLLSELGGANIYLKREDLNPTGSFKDRGAYYLLSRAKEKGG-----RTVVGASSGNHGRALAYAA   75 (306)
T ss_dssp             GGGGSSSS-EEEEHEHHHHHCTTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTT-----SEEEEESSSHHHHHHHHHH
T ss_pred             CcCCCcCCCEEECccccchhccCCeEEEEECCCCCcCCcccccchhhhhhcccccc-----ceeeeeccCCceehhhhhh
Confidence            57889999999975  4445567899999999999999999999999999988864     7799999999999999999


Q ss_pred             HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC--CCHHHHHHHHHHH---HHhCCCeEEcCCCCCChhHHHHHHhH
Q 028372           89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA--LRFEEILEKGEEI---LKKTPDGYLLRQFENPANPKIHYETT  163 (210)
Q Consensus        89 ~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~--~~~~~~~~~a~~~---~~~~~~~~~~~~~~n~~~~~~g~~t~  163 (210)
                      +.+|++|++|+|++.++.++++++.+|++|+.++..  ..++++.+.+++.   ....++.  ++|+ |+.+...||.++
T Consensus        76 ~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~g~~~~  152 (306)
T PF00291_consen   76 ARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGDVEGAFDDAQELAKERAELLSPFNGE--LNQY-NNPNVIAGYATI  152 (306)
T ss_dssp             HHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESSTHHHHHHHHHHHHHHHHHHHHHSTTE--ESTT-TSHHHHHHHHHH
T ss_pred             hhccccceeeeccccccccccceeeecceEEEccccccccccccccccccccccccccccc--cCcc-cchhhhhhhhhc
Confidence            999999999999999999999999999999999863  1233444444332   1222222  7777 555568999999


Q ss_pred             HHHHHHhhCCCCCE--EEEccCchhHHHHHHHHHHh--cCCCCEEEEEEe
Q 028372          164 GPEIWQDSGGKVDA--FISGIGTGGTVTGAGRFLKE--NNPDIKVVLRVL  209 (210)
Q Consensus       164 ~~Ei~~q~~~~~d~--vv~pvG~Gg~~~Gi~~~~k~--~~~~~~vigv~~  209 (210)
                      +.||++|++ .||.  ||+|+||||+++|++.+++.  . |++++|+|..
T Consensus       153 ~~Ei~~q~~-~~d~d~vvv~~GtGg~~~Gi~~~~~~~~~-~~~~vigv~~  200 (306)
T PF00291_consen  153 GLEIYEQLG-KPDPDYVVVPVGTGGTAAGIAAGLKELIL-PPVRVIGVEP  200 (306)
T ss_dssp             HHHHHHHHT-TESESEEEEEESSSHHHHHHHHHHHHHCH-TTSEEEEEEE
T ss_pred             chhcccccc-cccceEEEecCCchhHHHHHHhhhhhhhc-ccccceeeec
Confidence            999999997 6665  99999999999999999999  7 9999999864

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....

>cd06446 Trp-synth_B Tryptophan synthase-beta: Trptophan synthase is a bifunctional enzyme that catalyses the last two steps in the biosynthesis of L-tryptophan via its alpha and beta reactions

Probab=100.00  E-value=6.6e-40  Score=282.63  Aligned_cols=199  Identities=20%  Similarity=0.187  Sum_probs=158.7

Q ss_pred             hhhHhhhcccc-CCceeecccccCCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028372            6 AIKRDVTELIG-NTPMVYLNNVVDGC-VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG   83 (210)
Q Consensus         6 ~~~~~i~~~~~-~TPl~~~~~l~~~~-~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~a   83 (210)
                      +++....++++ +|||+++++++..+ +.+||+|+|++|||||||+|.+..++..+.++|.    ...++++|+||||+|
T Consensus        22 ~~~~~~~~~~~~~TPL~~l~~l~~~~g~~~l~~K~E~~nptgS~K~R~a~~~~~~a~~~g~----~~vv~~~ssGN~g~a   97 (365)
T cd06446          22 ELRELYKDYVGRPTPLYRAKRLSEYLGGAKIYLKREDLNHTGAHKINNALGQALLAKRMGK----KRVIAETGAGQHGVA   97 (365)
T ss_pred             HHHHHhhccCCCCCCceehHHHHHhhCCceEEEEeccCCCccchhHHHHHHHHHHHHHcCC----CeEEEecCchHHHHH
Confidence            34555565554 99999999998877 5799999999999999999999999999998885    233444799999999


Q ss_pred             HHHHHHHcCCcEEEEEcCCCC---HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHH-HHhC-CCeEEcCCC----CCC
Q 028372           84 LAFIAAARGYNLIIVMPSTCS---MERRIVLRALGAEIILADSA-LRFEEILEKGEEI-LKKT-PDGYLLRQF----ENP  153 (210)
Q Consensus        84 lA~~a~~~g~~~~vvvp~~~~---~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~-~~~~-~~~~~~~~~----~n~  153 (210)
                      +|++|+.+|++|++|+|...+   +.++++|+.+||+|+.++.. ..++++...+.+. +++. ..+|+++++    .++
T Consensus        98 lA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~~~~GAeV~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~~~~~~~~~  177 (365)
T cd06446          98 TATACALFGLECEIYMGAVDVERQPLNVFRMELLGAEVVPVPSGSGTLKDAISEAIRDWVTNVEDTHYLLGSVVGPHPYP  177 (365)
T ss_pred             HHHHHHHhCCCeEEEEcCCccccccchHHHHHHCCCEEEEeCCCCCcHHHHHHHHHHHHHhccCCceEecccccCCCCch
Confidence            999999999999999998643   36788999999999999864 2456665444333 4432 234444433    233


Q ss_pred             hhHHHHHHhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          154 ANPKIHYETTGPEIWQDSG----GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       154 ~~~~~g~~t~~~Ei~~q~~----~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      .++++|+.|+++||++|++    ..||+||+|+|+||+++|++.++++ .++++||+|..
T Consensus       178 ~~~~ag~~t~~~EI~~Q~~~~~~~~~D~vv~~vG~GGt~~Gi~~g~~~-~~~~~vigVep  236 (365)
T cd06446         178 NMVRDFQSVIGEEAKKQILEKEGELPDVVIACVGGGSNAAGLFYPFIN-DKDVKLIGVEA  236 (365)
T ss_pred             HHHHHhhhHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHh-CCCceEEEEcC
Confidence            4668899999999999996    3699999999999999999998877 56999999863

In the alpha reaction, indole 3-glycerol phosphate is cleaved reversibly to glyceraldehyde 3-phosphate and indole at the active site of the alpha subunit. In the beta reaction, indole undergoes a PLP-dependent reaction with L-serine to form L-tryptophan at the active site of the beta subunit. Members of this CD, Trp-synth_B, are found in all three major phylogenetic divisions.

>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia

Probab=100.00  E-value=3.9e-40  Score=278.27  Aligned_cols=186  Identities=24%  Similarity=0.254  Sum_probs=155.7

Q ss_pred             CceeecccccCCC--CceEEEEeCCCCCC---CchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCchHHHHHHHHHH
Q 028372           18 TPMVYLNNVVDGC--VARIAAKLETMEPC---SSVKDRIAYSMIKDAEDKGLITPGKTTLIEV--TSGNTGVGLAFIAAA   90 (210)
Q Consensus        18 TPl~~~~~l~~~~--~~~i~~K~E~~~pt---GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~--ssGN~g~alA~~a~~   90 (210)
                      |||++++.++..+  +.+||+|+|++||+   ||||+|++.+++.++.++|.     ++|+++  |+||||+|+|++|+.
T Consensus         1 TPl~~~~~l~~~~g~~~~l~~K~E~~np~gsfgs~K~R~~~~~l~~a~~~g~-----~~vv~~ggs~GN~g~alA~~a~~   75 (307)
T cd06449           1 TPIQYLPRLSEHLGGKVEIYAKRDDCNSGLAFGGNKIRKLEYLLPDALAKGA-----DTLVTVGGIQSNHTRQVAAVAAK   75 (307)
T ss_pred             CcccchhHHHHhhCCCCcEEEecccccCCCCccchHHHHHHHHHHHHHHcCC-----CEEEECCCchhHHHHHHHHHHHH
Confidence            8999999998776  57999999999999   57799999999999999886     668887  689999999999999


Q ss_pred             cCCcEEEEEcCCCC--------HHHHHHHHHcCCEEEEECCCCC--HHHHHHH-HHHHHHhCCCeEE-cCCC-CCChhHH
Q 028372           91 RGYNLIIVMPSTCS--------MERRIVLRALGAEIILADSALR--FEEILEK-GEEILKKTPDGYL-LRQF-ENPANPK  157 (210)
Q Consensus        91 ~g~~~~vvvp~~~~--------~~~~~~~~~~Ga~v~~v~~~~~--~~~~~~~-a~~~~~~~~~~~~-~~~~-~n~~~~~  157 (210)
                      +|++|++|+|++.+        ..|+++++.+||+|+.++.+..  ..++.+. ++.+.++.+..|+ .+++ +|+.+ .
T Consensus        76 ~G~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  154 (307)
T cd06449          76 LGLKCVLVQENWVPYSDAVYDRVGNILLSRIMGADVRLVSAGFDIGIRKSFEEAAEEVEAKGGKPYVIPAGGSEHPLG-G  154 (307)
T ss_pred             cCCeEEEEecCCCCcccccccccccHHHHHHCCCEEEEECCcchhhHHHHHHHHHHHHHHcCCceEEecCCCCCCccc-H
Confidence            99999999999876        4689999999999999986421  1222333 3334444333444 4555 49988 6


Q ss_pred             HHHHhHHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          158 IHYETTGPEIWQDSGG---KVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       158 ~g~~t~~~Ei~~q~~~---~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      .||.+++.||++|++.   .||+||+|+|||||++|++.+||+.+|+++||+|..
T Consensus       155 ~G~~t~~~Ei~~q~~~~~~~~d~vv~~~GtGgt~~G~~~~~~~~~~~~~ii~V~~  209 (307)
T cd06449         155 LGYVGFVLEIAQQEEELGFKFDSIVVCSVTGSTHAGLSVGLAALGRQRRVIGIDA  209 (307)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHhcCCCCeEEEEEe
Confidence            7899999999999964   699999999999999999999999999999999975

>TIGR01415 trpB_rel pyridoxal-phosphate dependent TrpB-like enzyme

Probab=100.00  E-value=1.4e-39  Score=283.86  Aligned_cols=196  Identities=20%  Similarity=0.221  Sum_probs=159.4

Q ss_pred             hhHhhhccccCCceeecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEE-eeCCCchHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLI-EVTSGNTGVG   83 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv-~~ssGN~g~a   83 (210)
                      +.+.+....++|||+++++|++.+|  ++||+|+|++|||||||+|++.+++..+.++|.     +.++ ++|+||||.|
T Consensus        58 v~~~~~l~g~pTPL~r~~~L~~~lg~~~~Iy~K~E~~nPtGS~K~R~A~~~~~~a~~~G~-----~~~vtetssGN~G~a  132 (419)
T TIGR01415        58 VLKRYAQIGRPTPLIRAKGLEELLGTPARIYYKYESVSPTGSHKINTAIAQAYYAKIEGA-----KRLVTETGAGQWGSA  132 (419)
T ss_pred             HHHHHHhcCCCCCeEEccchhhhhCCCceEEEEECCCCCCCCcHHHHHHHHHHHHHHcCC-----CeEEEecCchHHHHH
Confidence            4455555556999999999988776  699999999999999999999999999999986     3455 5688999999


Q ss_pred             HHHHHHHcCCcEEEEEcCCC---CHHHHHHHHHcCCEEEEECCCCCH----------------HHHHHHHHHHHHhCC-C
Q 028372           84 LAFIAAARGYNLIIVMPSTC---SMERRIVLRALGAEIILADSALRF----------------EEILEKGEEILKKTP-D  143 (210)
Q Consensus        84 lA~~a~~~g~~~~vvvp~~~---~~~~~~~~~~~Ga~v~~v~~~~~~----------------~~~~~~a~~~~~~~~-~  143 (210)
                      +|++|+.+|++|+||||+..   ++.|+.+|+.+||+|+.++.+.+-                ..+++.+.+.+++.+ .
T Consensus       133 lA~aaa~~Gl~~~V~mp~~s~~~k~~k~~~m~~~GA~Vi~~~~~~~~~~r~~~~~~p~~~gsl~~ai~~a~e~a~~~~~~  212 (419)
T TIGR01415       133 LSLAGALFGLECKVFMVRVSFNQKPYRKYLMELYGAEVIPSPSEFTEFGREVLKEDPDHPGSLGIAISEAIEYALSDEDT  212 (419)
T ss_pred             HHHHHHHcCCcEEEEEeCCCcccCHHHHHHHHHcCCEEEEECCchhhHHHHhhhcccccccchHHHHHHHHHHHHhCCCC
Confidence            99999999999999999843   568899999999999999964211                113556666666544 4


Q ss_pred             eEEcCCCCCChhHHHHHHhHHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhc----CCCCEEEEEEe
Q 028372          144 GYLLRQFENPANPKIHYETTGPEIWQDSGG---KVDAFISGIGTGGTVTGAGRFLKEN----NPDIKVVLRVL  209 (210)
Q Consensus       144 ~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~---~~d~vv~pvG~Gg~~~Gi~~~~k~~----~~~~~vigv~~  209 (210)
                      .|+.+++.|+  +..|+.++|+||++|++.   .||+||+|+|+||+++|++.+|++.    .++++||+|-.
T Consensus       213 ~y~~~~~~n~--~~~h~~~ig~Ei~~Ql~~~g~~pD~vv~~vG~Gg~~~Gi~~~f~~~~l~g~~~~rviaVep  283 (419)
T TIGR01415       213 KYSLGSVLNH--VLLHQTVIGLEAKKQMEEAGEDPDVIIGCVGGGSNFAGLAFPFVADKLSGKIDRRFIAAEP  283 (419)
T ss_pred             EEEeCCCCcH--HHHHHHHHHHHHHHHHHhcCCCCCEEEEEeCchHHHHHHHHHHHHHHhcCCCCCEEEEEee
Confidence            5666666553  467999999999999963   4999999999999999999888432    36899999853

This model represents a family of pyridoxal-phosphate dependent enzyme (pfam00291) closely related to the beta subunit of tryptophan synthase (TIGR00263). However, the only case in which a member of this family replaces a member of TIGR00263 is in Sulfolobus species which contain two sequences which hit this model, one of which is proximal to the alpha subunit. In every other case so far, either the species appears not to make tryptophan (there is no trp synthase alpha subunit), or a trp synthase beta subunit matching TIGR00263 is also found.

>PRK12390 1-aminocyclopropane-1-carboxylate deaminase; Provisional

Probab=100.00  E-value=7.6e-40  Score=279.72  Aligned_cols=199  Identities=19%  Similarity=0.176  Sum_probs=164.7

Q ss_pred             hhhhHhhhccccCCceeecccccCCCC--ceEEEEeCCCCCC---CchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CC
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPC---SSVKDRIAYSMIKDAEDKGLITPGKTTLIEV--TS   77 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~pt---GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~--ss   77 (210)
                      ++.++++...+++|||+++++++...|  .+||+|+|++||+   ||||+|.+.+++.+++++|.     .+|+++  |+
T Consensus         3 ~~~~~~~~l~~g~TPL~~~~~l~~~~g~~~~v~~K~E~~n~~~~~gs~K~R~~~~~l~~a~~~G~-----~~vvs~G~s~   77 (337)
T PRK12390          3 LQKFPRYPLTFGPTPIHPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGA-----DTLVSIGGVQ   77 (337)
T ss_pred             CCCCCccccCCCCCcceeHHHHHHHhCCCCeEEEEeCCCCCCCCccchhHHHHHHHHHHHHHcCC-----CEEEEeCCCc
Confidence            345667888999999999999887777  6999999999988   78899999999999999986     667877  88


Q ss_pred             CchHHHHHHHHHHcCCcEEEEEcCCCC--------HHHHHHHHHcCCEEEEECCCC--CHHHHHHHHHHHHHhCCC-eEE
Q 028372           78 GNTGVGLAFIAAARGYNLIIVMPSTCS--------MERRIVLRALGAEIILADSAL--RFEEILEKGEEILKKTPD-GYL  146 (210)
Q Consensus        78 GN~g~alA~~a~~~g~~~~vvvp~~~~--------~~~~~~~~~~Ga~v~~v~~~~--~~~~~~~~a~~~~~~~~~-~~~  146 (210)
                      ||||+|+|++|+.+|++|++|++...+        ..|+..++.+||+|+.++.+.  .+.++.+.+.+..++..+ .|.
T Consensus        78 GN~g~alA~aa~~~G~~~~iv~~~~~p~~~~~~~~~~~~~~~~~~GA~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (337)
T PRK12390         78 SNHTRQVAAVAAHLGMKCVLVQENWVNYEDAVYDRVGNILLSRIMGADVRLVPDGFDIGIRKSWEDALEDVRAAGGKPYA  157 (337)
T ss_pred             cHHHHHHHHHHHHcCCeEEEEeCCCCCCccchhhccccHHHHHHCCCEEEEeCCCcchhHHHHHHHHHHHHHhCCCceEE
Confidence            999999999999999999999876544        336778999999999998742  234666666666666334 444


Q ss_pred             cCCCCC--ChhHHHHHHhHHHHHHHh---hCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          147 LRQFEN--PANPKIHYETTGPEIWQD---SGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       147 ~~~~~n--~~~~~~g~~t~~~Ei~~q---~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++.+.+  +.. ..|+.++++||++|   ++.+||+||+|+|||||++|++.+||+..|++|||||.+
T Consensus       158 ~~~~~~~~~~~-~~G~~~~a~Ei~~q~~~~~~~~d~vvv~vGtGgtlaGi~~~~k~~~~~~rvigV~~  224 (337)
T PRK12390        158 IPAGASDHPLG-GLGFVGFAEEVRAQEAELGFKFDYIVVCSVTGSTQAGMVVGFAADGRARRVIGIDA  224 (337)
T ss_pred             eCCcCCCCCcc-cHHHHHHHHHHHHHHHhcCCCCCEEEEecCcchhHHHHHHHHHhcCCCceEEEEEe
Confidence            555533  333 56888999999998   444799999999999999999999999999999999975

>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase

Probab=100.00  E-value=1.3e-39  Score=278.26  Aligned_cols=198  Identities=19%  Similarity=0.182  Sum_probs=164.5

Q ss_pred             hhhHhhhccccCCceeecccccCCCCc--eEEEEeCCCCCC---CchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCC
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCVA--RIAAKLETMEPC---SSVKDRIAYSMIKDAEDKGLITPGKTTLIEV--TSG   78 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~~--~i~~K~E~~~pt---GS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~--ssG   78 (210)
                      .-++++...+++|||++++++++.+|.  +||+|+|++||+   ||||+|++.+++.+++++|.     ++|+++  |+|
T Consensus         3 ~~~~~~~l~~g~TPl~~~~~l~~~~g~~~~l~~K~E~~n~~~~~gs~K~R~~~~~l~~a~~~G~-----~~vvs~ggs~g   77 (337)
T TIGR01274         3 SRFPRYPLTFGPSPIHPLPRLSQHLGGKVTLYAKREDCNSGLAFGGNKTRKLEYLIPDAQAQGC-----TTLVSIGGIQS   77 (337)
T ss_pred             CcCCccccCCCCCCceEhHhhHHhcCCCceEEEEccCCcCCcCccchHHHHHHHHHHHHHHcCC-----CEEEECCCCcc
Confidence            345678889999999999999887764  999999999986   78899999999999999986     667876  779


Q ss_pred             chHHHHHHHHHHcCCcEEEEEcCCCC--------HHHHHHHHHcCCEEEEECCCC--CHHHHHHHHHHHHHhC-CCeEEc
Q 028372           79 NTGVGLAFIAAARGYNLIIVMPSTCS--------MERRIVLRALGAEIILADSAL--RFEEILEKGEEILKKT-PDGYLL  147 (210)
Q Consensus        79 N~g~alA~~a~~~g~~~~vvvp~~~~--------~~~~~~~~~~Ga~v~~v~~~~--~~~~~~~~a~~~~~~~-~~~~~~  147 (210)
                      |||+|+|++|+.+|++|++|+|+..+        +.|+.+|+.+||+|+.++...  ...+....+.+.+++. +..|++
T Consensus        78 N~g~alA~~a~~~Gl~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA~v~~v~~~~~~~~~~~~~~a~~~~~~~~~~~~~i  157 (337)
T TIGR01274        78 NQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQLSRIMGADVRLDPDGFDIGHRNSWERALEEVRGAGGKPYPI  157 (337)
T ss_pred             hHHHHHHHHHHHcCCcEEEEeccCCCccccchhccchHHHHHHcCCEEEEeCCcccccchHHHHHHHHHHHhcCCceEEe
Confidence            99999999999999999999998542        589999999999999998642  1234555555555554 344666


Q ss_pred             CCCC--CChhHHHHHHhHHHHHHHhh---CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          148 RQFE--NPANPKIHYETTGPEIWQDS---GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       148 ~~~~--n~~~~~~g~~t~~~Ei~~q~---~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +.+.  |+.. ..|+.++++||++|+   +..||+||+|+|||||++|++.++++.+|+++||||.+
T Consensus       158 ~~~~~~~~~~-~~G~~~~~~Ei~eq~~~~~~~~D~vvv~vGtGgt~aGl~~~~~~~~~~~~vigV~~  223 (337)
T TIGR01274       158 PAGCSDHPLG-GLGFVGFAFEVREQEGELGFKFDYVVVCSVTGSTQAGMVAGFAADGRKDRVIGIDA  223 (337)
T ss_pred             CCCCCCCccc-hhHHHHHHHHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEEe
Confidence            6653  3544 568889999999995   34799999999999999999999999999999999975

This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.

>PRK12391 tryptophan synthase subunit beta; Reviewed

Probab=100.00  E-value=3.6e-39  Score=281.62  Aligned_cols=192  Identities=21%  Similarity=0.218  Sum_probs=157.3

Q ss_pred             hccccCCceeecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCCchHHHHHHHH
Q 028372           12 TELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIE-VTSGNTGVGLAFIA   88 (210)
Q Consensus        12 ~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~-~ssGN~g~alA~~a   88 (210)
                      ....++|||+++++|+..+|  .+||+|+|++|||||||+|++..++..+.++|.     ..+++ .|+||||.|+|++|
T Consensus        72 ~~~~~~TPL~~~~~L~~~lg~~~~Iy~K~E~~nPtGS~K~R~A~~~a~~a~~~G~-----~~~vtetgsGN~G~alA~aa  146 (427)
T PRK12391         72 YRLWRPTPLIRARRLEKALGTPAKIYYKYEGVSPTGSHKPNTAVAQAYYNKKEGI-----KRLTTETGAGQWGSALALAC  146 (427)
T ss_pred             HcccCCCCeeEchhhHhhhCCCceEEEEEcCCCCCCChHHHHHHHHHHHHHHCCC-----CEEEEccCchHHHHHHHHHH
Confidence            45678999999999988776  699999999999999999999999999999986     34554 67899999999999


Q ss_pred             HHcCCcEEEEEcCC---CCHHHHHHHHHcCCEEEEECCCCC----------------HHHHHHHHHHHHHhCCCeEEcCC
Q 028372           89 AARGYNLIIVMPST---CSMERRIVLRALGAEIILADSALR----------------FEEILEKGEEILKKTPDGYLLRQ  149 (210)
Q Consensus        89 ~~~g~~~~vvvp~~---~~~~~~~~~~~~Ga~v~~v~~~~~----------------~~~~~~~a~~~~~~~~~~~~~~~  149 (210)
                      +.+|++|+||||+.   .++.|+++|+.+||+|+.++.+.+                +..+++.+.+.+.+.++.+|..+
T Consensus       147 a~~Gl~~~V~mp~~s~~~k~~r~~~mr~~GA~Vi~~~~~~~~~~~~~~~~~~~~~gsl~~ai~~A~e~a~~~~~~~y~~~  226 (427)
T PRK12391        147 ALFGLECTVFMVRVSYEQKPYRRSLMETYGAEVIPSPSDLTEAGRKILAEDPDHPGSLGIAISEAVEDAAKRPDTKYALG  226 (427)
T ss_pred             HHcCCcEEEEEecCCcccCHHHHHHHHHCCCEEEEECCchhhhhhhhhhcCccccccHHHHHHHHHHHHHhCCCcEEEcC
Confidence            99999999999974   367889999999999999986421                11256667777766545455544


Q ss_pred             CCCChhHHHHHHhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHh---cC-CCCEEEEEEe
Q 028372          150 FENPANPKIHYETTGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKE---NN-PDIKVVLRVL  209 (210)
Q Consensus       150 ~~n~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~---~~-~~~~vigv~~  209 (210)
                      +. ..++..||.++++||++|++   ..||+||+|+|+||+++|++.+|..   .+ ++++||+|..
T Consensus       227 s~-~~~~~~~~~~ig~Ei~~Ql~~~g~~pD~Vv~~vG~Gg~~aGi~~~f~~~~~~g~~~~riiaVEp  292 (427)
T PRK12391        227 SV-LNHVLLHQTVIGLEAKKQLELAGEYPDVVIGCVGGGSNFAGLAFPFLGDKLEGKKDTRFIAVEP  292 (427)
T ss_pred             CC-CcHHHhhHHHHHHHHHHHHHhcCCCCCEEEEecCchHHHHHHHHHHHHHHhcCCCCceEEEEee
Confidence            33 23457899999999999995   3699999999999999999997732   34 8999999863

>PRK13803 bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta; Provisional

Probab=100.00  E-value=2.2e-38  Score=287.82  Aligned_cols=194  Identities=22%  Similarity=0.211  Sum_probs=159.3

Q ss_pred             hhcccc-CCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372           11 VTELIG-NTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA   89 (210)
Q Consensus        11 i~~~~~-~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~   89 (210)
                      ..++.+ +|||+++++|++.+|.+||+|+|++|||||||+|.+...+..+.+.|+    ...++++|+||||+|+|++|+
T Consensus       264 ~~~~~grpTPL~~~~~Ls~~~G~~IylK~E~lnptGS~K~r~al~~~~~a~~~g~----~~vi~e~gsGnhG~A~A~~aa  339 (610)
T PRK13803        264 LQNYAGRPTPLTEAKRLSDIYGARIYLKREDLNHTGSHKINNALGQALLAKRMGK----TRIIAETGAGQHGVATATACA  339 (610)
T ss_pred             HHHhCCCCCcceeHHHHHHhhCCEEEEEeCCCCCcccHHHHHHHHHHHHHHHcCC----CEEEEecChHHHHHHHHHHHH
Confidence            455565 899999999998888999999999999999999999999999988775    245667899999999999999


Q ss_pred             HcCCcEEEEEcCCC---CHHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEEcCCCC---C--ChhHHHH
Q 028372           90 ARGYNLIIVMPSTC---SMERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYLLRQFE---N--PANPKIH  159 (210)
Q Consensus        90 ~~g~~~~vvvp~~~---~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~~~~~~---n--~~~~~~g  159 (210)
                      .+|++|++|||...   ...++.+|+.+||+|+.++. ..++.++.+.+.+ +..+.++.+|+.++.   +  |.++..|
T Consensus       340 ~~Gl~~~I~m~~~~~~~~~~nv~~m~~~GA~Vi~v~~~~~~~~~a~~~a~~~~~~~~~~~~y~~~~~~g~~p~p~~v~~~  419 (610)
T PRK13803        340 LFGLKCTIFMGEEDIKRQALNVERMKLLGANVIPVLSGSKTLKDAVNEAIRDWVASVPDTHYLIGSAVGPHPYPEMVAYF  419 (610)
T ss_pred             HcCCcEEEEEeCCcccchhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCcCCCCCcHHHHHHH
Confidence            99999999999764   35688899999999999985 3457777554444 434444667765432   2  3443458


Q ss_pred             HHhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          160 YETTGPEIWQDSG----GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       160 ~~t~~~Ei~~q~~----~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++|++.||.+|+.    ..||+||+|+||||+++|++.+|++ .|++++|||-.
T Consensus       420 ~~tig~Ei~~Q~~~~~g~~pD~vV~~vGgGg~~~Gi~~~f~~-~~~v~iigVE~  472 (610)
T PRK13803        420 QSVIGEEAKEQLKEQTGKLPDAIIACVGGGSNAIGIFYHFLD-DPSVKLIGVEA  472 (610)
T ss_pred             hhHHHHHHHHHHHHhhCCCCCEEEEEeCcCHhHHHHHHHHhh-CCCceEEEEec
Confidence            9999999999984    2599999999999999999999964 79999999863

>TIGR03844 cysteate_syn cysteate synthase

Probab=100.00  E-value=1.2e-38  Score=276.72  Aligned_cols=177  Identities=16%  Similarity=0.144  Sum_probs=152.8

Q ss_pred             ccccCCceeecccccCCCCc-eEEEEe-------CCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028372           13 ELIGNTPMVYLNNVVDGCVA-RIAAKL-------ETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGL   84 (210)
Q Consensus        13 ~~~~~TPl~~~~~l~~~~~~-~i~~K~-------E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~al   84 (210)
                      ...+.|||+++++|++.+|. ++|+|+       |++|||||||||++.+++..+.+.|.     +.|+++|+||||+|+
T Consensus        58 ~~~g~tpl~~~~~L~~~lG~~~v~~K~e~~~~K~E~~npTGSFKdRga~~~i~~a~~~g~-----~~Vv~aSsGN~g~al  132 (398)
T TIGR03844        58 RTRGGPVTYKSEGLARELGLSDLYITFSGYWPERGAFMRTCSFKELEALPTMQRLKERGG-----KTLVVASAGNTGRAF  132 (398)
T ss_pred             CCCCCCceeehHHHHHHhCCCeEEEEecCcccchhccCCccccHHHHHHHHHHHHHHcCC-----CEEEEECCCHHHHHH
Confidence            45667999999999988887 999954       55899999999999999999998874     779999999999999


Q ss_pred             HHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372           85 AFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG  164 (210)
Q Consensus        85 A~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  164 (210)
                      |++|+++|++|+||||++++..+...++.+|++|+.+++  +++++.+.+++++++. +++..++++||.. ++|++|++
T Consensus       133 A~~aa~~Gi~~~I~vP~~~~~~~~~~~~~~ga~vv~v~g--~~d~a~~~a~~~a~~~-g~~~~~~~~~p~~-ieG~~Ti~  208 (398)
T TIGR03844       133 AEVSAITGQPVILVVPKSSADRLWTTEPASSVLLVTVDG--DYTDAIALADRIATLP-GFVPEGGARNVAR-RDGMGTVM  208 (398)
T ss_pred             HHHHHHcCCcEEEEECCChHHHHHHHhhCCcEEEEECCC--CHHHHHHHHHHHHHhC-CccccCCCCCHHH-HhhHHHHH
Confidence            999999999999999998654444445788999999986  4899999999998876 5655566678886 79999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhc
Q 028372          165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKEN  198 (210)
Q Consensus       165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~  198 (210)
                      +||+||++..||+||+|+|+|+.+.|++.+++++
T Consensus       209 ~Ei~eql~~~PD~VvvPvG~G~~~~~~~~~~~~l  242 (398)
T TIGR03844       209 LDAAVTIGSLPDHYFQAVGSGTGGIAAWEAAMRL  242 (398)
T ss_pred             HHHHHHcCCCCCEEEEecCCCHHHHHHHHHHHHH
Confidence            9999999644999999999999899999998873

Members of this family are cysteate synthase, an enzyme of alternate pathway to sulfopyruvate, a precursor of coenzyme M.

>COG0498 ThrC Threonine synthase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.4e-33  Score=241.10  Aligned_cols=186  Identities=25%  Similarity=0.260  Sum_probs=167.2

Q ss_pred             hhhccccCCceeecccccCCCCc---eEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372           10 DVTELIGNTPMVYLNNVVDGCVA---RIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus        10 ~i~~~~~~TPl~~~~~l~~~~~~---~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      ......+.||+++.+.+...++.   ++|+|.|++|||||||||++..++..+.+.|.     .+|+++||||+|.|+|+
T Consensus        69 ~~~l~eg~tp~~~~~~~~~~l~~~~~~lyvk~~~~nPT~SFKDrg~~~~~~~~~~~g~-----~~I~~ASSGnTgAs~aa  143 (411)
T COG0498          69 AVSLGEGGTPLYKAPALAAPLGVLNDNLYVKELGHNPTGSFKDRGMTVLVSLAKELGA-----KTILCASSGNTGASAAA  143 (411)
T ss_pred             hhhhhhccCccccCcccchhhccCCcceehhhhccCCCcchhhhhHHHHHHHHHHhcC-----CEEEEeCCchHHHHHHH
Confidence            44667888999999888776663   59999999999999999999999999999884     56999999999999999


Q ss_pred             HHHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHH
Q 028372           87 IAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGP  165 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  165 (210)
                      ++.+.|++|.|++|.. .+..|+.+|..+|++++.++++  +|++++.+++++++. ++++....-||.. +.|+.|+++
T Consensus       144 ya~rag~~v~Vl~P~g~vs~~k~~q~~~~ga~~i~v~G~--fDda~~~vk~~~~~~-~~~~~~nsiNp~r-legq~t~~f  219 (411)
T COG0498         144 YAARAGLKVFVLYPKGKVSPGKLAQMLTLGAHVIAVDGN--FDDAQELVKEAANRE-GLLSAVNSINPYR-LEGQKTYAF  219 (411)
T ss_pred             HhccCCCeEEEEecCCCCCHHHHHHHHhcCCEEEEEcCc--HHHHHHHHHHHHhhC-CceeeccccCHHH-hhhhhhhHh
Confidence            9999999999999998 9999999999999999999974  899999999999866 5677777788887 789999999


Q ss_pred             HHHHhhC-CCCCEEEEccCchhHHHHHHHHHHhcCCCCEE
Q 028372          166 EIWQDSG-GKVDAFISGIGTGGTVTGAGRFLKENNPDIKV  204 (210)
Q Consensus       166 Ei~~q~~-~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~v  204 (210)
                      ||++|++ ..||+|++|+|+||.+.|++.++++..|.=++
T Consensus       220 e~~~ql~~~~p~~v~vPvGn~gni~a~~~g~~~~~~~g~i  259 (411)
T COG0498         220 EIAEQLGWKAPDHVVVPVGNGGNLLAIYKGFKEGLPIGKI  259 (411)
T ss_pred             HHHHHhCCCCCCeEEEeCCchHHHHHHHHHHHhcccccch
Confidence            9999997 47999999999999999999999998775433

>COG0133 TrpB Tryptophan synthase beta chain [Amino acid transport and metabolism]

Probab=99.96  E-value=1.9e-28  Score=201.04  Aligned_cols=192  Identities=19%  Similarity=0.232  Sum_probs=159.7

Q ss_pred             hcccc-CCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028372           12 TELIG-NTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAA   90 (210)
Q Consensus        12 ~~~~~-~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~   90 (210)
                      .++.+ +|||+..++|++.+|++||+|+|++|+||+||...+...+.-|++.|+    ++.|.+...|.||.|.|.+|++
T Consensus        50 ~~Y~GRptpLy~a~~Lt~~~gakiyLKREDL~HtGAHKiNN~lGQ~LLAkrMGK----~riIAETGAGQHGVAtAta~A~  125 (396)
T COG0133          50 KDYAGRPTPLYFAERLTEHLGAKIYLKREDLNHTGAHKINNALGQALLAKRMGK----TRIIAETGAGQHGVATATAAAL  125 (396)
T ss_pred             HHhCCCCChhHHHHHHHHhhCceEEEehhhhcccchhhHHHHHHHHHHHHHhCC----ceEEeecCCCcccHHHHHHHHH
Confidence            44444 599999999999999999999999999999999999999999999997    5677788889999999999999


Q ss_pred             cCCcEEEEEcCC---CCHHHHHHHHHcCCEEEEEC-CCCCHHHHHHHH-HHHHHhCCCeEEcCCC-----CCChhHHHHH
Q 028372           91 RGYNLIIVMPST---CSMERRIVLRALGAEIILAD-SALRFEEILEKG-EEILKKTPDGYLLRQF-----ENPANPKIHY  160 (210)
Q Consensus        91 ~g~~~~vvvp~~---~~~~~~~~~~~~Ga~v~~v~-~~~~~~~~~~~a-~~~~~~~~~~~~~~~~-----~n~~~~~~g~  160 (210)
                      +|++|+|||-..   -...+.-.|+.+||+|+.|. ++.++.|+.+.| +.....-+..+|+-..     --|......+
T Consensus       126 fgl~C~iYMGa~Dv~RQ~~NVfRM~LlGA~V~pV~sGs~TLKDA~neAlRdWvtn~~~ThY~iGsa~GPHPyP~iVRdFQ  205 (396)
T COG0133         126 FGLECVIYMGAEDVERQALNVFRMRLLGAEVVPVTSGSGTLKDAINEALRDWVTNVEDTHYLIGSAAGPHPYPTIVRDFQ  205 (396)
T ss_pred             hCCceEEEecchhhhhcccchhhhhhcCceEEEeccCCchHHHHHHHHHHHHHhccccceEEEeeccCCCCchHHHHHHH
Confidence            999999999864   25677889999999999987 466788888776 4455555567777433     1233445588


Q ss_pred             HhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          161 ETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       161 ~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +.|+.|.-+|+    +.-||+||.|||+|+.+.|+...|.. .+++++|||-
T Consensus       206 ~vIG~E~k~Qile~egrlPD~vvACVGGGSNAiG~F~~Fi~-d~~V~LiGvE  256 (396)
T COG0133         206 SVIGEEAKAQILEKEGRLPDAVVACVGGGSNAIGIFHPFID-DESVRLIGVE  256 (396)
T ss_pred             HHHhHHHHHHHHHHhCCCCCeEEEeccCCcchhhhcccccC-CCCceEEEec
Confidence            99999998886    34599999999999999999888854 4789999985

>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]

Probab=99.96  E-value=1.3e-27  Score=195.41  Aligned_cols=200  Identities=21%  Similarity=0.225  Sum_probs=164.2

Q ss_pred             hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCC--Cch
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEP--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTS--GNT   80 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ss--GN~   80 (210)
                      +.-++|+.....+||+..+++++...|.+||+|+||+.+  .|.+|.|+..+++.+|..+|.     +++|+..+  +||
T Consensus         3 l~rf~R~~l~~~pTPiq~L~rls~~lg~eiYiKRDD~t~l~~gGNK~RKLefll~eal~~g~-----dTlvT~GgiQSNh   77 (323)
T COG2515           3 LSRFPRMELIFGPTPIQKLPRLSAHLGVEIYIKRDDLTGLAFGGNKIRKLEFLLGEALRKGA-----DTLVTYGGIQSNH   77 (323)
T ss_pred             cccCCccccCCCCChhhhHHHHHHhcCeEEEEEcccccccccCccHHHHHHHHHhhhhhcCC-----cEEEEecccchhH
Confidence            456788889999999999999999999999999999965  369999999999999998885     77888866  999


Q ss_pred             HHHHHHHHHHcCCcEEEEEcCCC----CHHHHHHHHHcCCEEEEECCCCCH--HH-HHHHHHHHHHhCCCeEEcCC-CCC
Q 028372           81 GVGLAFIAAARGYNLIIVMPSTC----SMERRIVLRALGAEIILADSALRF--EE-ILEKGEEILKKTPDGYLLRQ-FEN  152 (210)
Q Consensus        81 g~alA~~a~~~g~~~~vvvp~~~----~~~~~~~~~~~Ga~v~~v~~~~~~--~~-~~~~a~~~~~~~~~~~~~~~-~~n  152 (210)
                      .+++|++|+++|++|++++....    ...++...+.+|+++..++...++  .. +...++++.++....|.++. ..|
T Consensus        78 ~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~~~~g~kpyvIp~GG~~  157 (323)
T COG2515          78 VRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEVRKQGGKPYVIPEGGSS  157 (323)
T ss_pred             HHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHHHHHHHHhcCCCCcEeccCCcC
Confidence            99999999999999999998754    344677778899999999976544  22 23334444444434444433 346


Q ss_pred             ChhHHHHHHhHHHHHHHhhC--CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEeC
Q 028372          153 PANPKIHYETTGPEIWQDSG--GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVLL  210 (210)
Q Consensus       153 ~~~~~~g~~t~~~Ei~~q~~--~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~l  210 (210)
                      |.. .-||...+.||.+|..  -++|.||+++|||||.||+..++...+|+++|||+.+.
T Consensus       158 ~~g-~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~gT~AGl~~g~~~~~~~~~ViG~~v~  216 (323)
T COG2515         158 PLG-ALGYVRLALEIAEQAEQLLKFDSVVVAPGSGGTHAGLLVGLAQLGPDVEVIGIDVS  216 (323)
T ss_pred             ccc-cccHHHHHHHHHHHHhhccCCCEEEEeCCCcchHHHHHHHhhhccCCCceEEEeec
Confidence            654 5689999999999986  57999999999999999999999999999999999763

>PRK09225 threonine synthase; Validated

Probab=99.93  E-value=1.1e-24  Score=191.84  Aligned_cols=178  Identities=16%  Similarity=0.116  Sum_probs=144.3

Q ss_pred             CCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHH---HHHHHHHcCCCCCCCeEEEeeCCCchHHHH-HHHHHHcC
Q 028372           17 NTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYS---MIKDAEDKGLITPGKTTLIEVTSGNTGVGL-AFIAAARG   92 (210)
Q Consensus        17 ~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~---~~~~a~~~g~~~~~~~~vv~~ssGN~g~al-A~~a~~~g   92 (210)
                      .+||.++..       ++|+....++||||||||++..   ++..+.+ +.    ...|+++||||+|.|+ |.++.+.|
T Consensus        88 ~~pl~~l~~-------~~~~lELfhGPT~sFKD~a~~~l~~~l~~a~~-~~----~~~Il~ATSGdtG~Aa~aaf~~~~g  155 (462)
T PRK09225         88 IAPLVQLDD-------NLYVLELFHGPTLAFKDFALQFLAQLLEYVLK-GE----KITILGATSGDTGSAAAEAFRGKPN  155 (462)
T ss_pred             ccceEEeCC-------CceeHhhccCCccchhhhHHHHHHHHHHHHHh-CC----CcEEEEcCCCcHHHHHHHHHhCcCC
Confidence            478887642       5899888999999999999988   7888876 42    3789999999999998 67788999


Q ss_pred             CcEEEEEcCC-CCHHHHHHHHHc-CCEEEEECCCCCHHHHHHHHHHHHHhC-----CCeEEcCCCCCChhHHHHHHhHHH
Q 028372           93 YNLIIVMPST-CSMERRIVLRAL-GAEIILADSALRFEEILEKGEEILKKT-----PDGYLLRQFENPANPKIHYETTGP  165 (210)
Q Consensus        93 ~~~~vvvp~~-~~~~~~~~~~~~-Ga~v~~v~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~n~~~~~~g~~t~~~  165 (210)
                      ++|+|++|++ +++.++++|..+ |++|+.+.-+++++++++.++++..+.     -+++-.+. -|+.. +.++.+.++
T Consensus       156 i~~~V~~P~g~vs~~q~~Qm~t~~g~nv~vi~V~G~fDD~q~~vk~~~~d~~~~~~~~l~saNS-iN~~R-i~gQ~~yyf  233 (462)
T PRK09225        156 VRVVILYPKGKVSPVQEKQMTTLQGDNIHVVAVEGNFDDCQALVKAAFNDEELKEKLKLSSANS-INIGR-LLAQIVYYF  233 (462)
T ss_pred             CEEEEEEcCCCCCHHHHHHHHhhcCCCeEEEEeCCCHHHHHHHHHHHhhchhhhhcCceEEEec-cCHHH-HHHHHHHHH
Confidence            9999999996 899999999999 998854444456999999988876651     13444444 47776 679999999


Q ss_pred             HHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          166 EIWQDSGG---KVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       166 Ei~~q~~~---~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      |+++|+.+   .||.|+||+|+||.+.|.+.+.+...|--|+|+++
T Consensus       234 ea~~ql~~~~~~p~~~vVPtGnfgni~a~~~Ak~mGlpi~kli~A~  279 (462)
T PRK09225        234 YAYLQLGIEAGEKVNFSVPSGNFGNILAGYYAKKMGLPIKRLIVAT  279 (462)
T ss_pred             HHHHHhccccCCCCEEEEECCcHHHHHHHHHHHHcCCCcceEEEEe
Confidence            99999963   38999999999999999999955545644777653

>cd01560 Thr-synth_2 Threonine synthase catalyzes the final step of threonine biosynthesis

Probab=99.92  E-value=9.6e-24  Score=186.00  Aligned_cols=178  Identities=14%  Similarity=0.109  Sum_probs=143.3

Q ss_pred             CCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHHHcCCCCCCCeEEEeeCCCchHHH-HHHHHHHcC
Q 028372           17 NTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSM---IKDAEDKGLITPGKTTLIEVTSGNTGVG-LAFIAAARG   92 (210)
Q Consensus        17 ~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~---~~~a~~~g~~~~~~~~vv~~ssGN~g~a-lA~~a~~~g   92 (210)
                      .+||.++..       ++|++.+.++||||||||++..+   +..+.++..   +...|+++||||+|.| ++.++.+.|
T Consensus        87 ~~pl~~l~~-------~~~~lELfhGPT~sFKD~a~~~l~~l~~~~~~~~~---~~~~Il~ATSGdTG~Aa~aaf~~~~g  156 (460)
T cd01560          87 IAPLVQLGD-------NLYVLELFHGPTLAFKDMALQFLGRLLEYFLKRRN---ERITILVATSGDTGSAAIEGFRGKPN  156 (460)
T ss_pred             ccceEEeCC-------CcEEeeeeeCCCcchHHhHHHHHHHHHHHHHHhcC---CCeEEEEcCCCcHHHHHHHHHhCcCC
Confidence            378877642       68999999999999999999876   666655411   2478999999999999 478899999


Q ss_pred             CcEEEEEcCC-CCHHHHHHHHHcCC---EEEEECCCCCHHHHHHHHHHHHHhC-----CCeEEcCCCCCChhHHHHHHhH
Q 028372           93 YNLIIVMPST-CSMERRIVLRALGA---EIILADSALRFEEILEKGEEILKKT-----PDGYLLRQFENPANPKIHYETT  163 (210)
Q Consensus        93 ~~~~vvvp~~-~~~~~~~~~~~~Ga---~v~~v~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~n~~~~~~g~~t~  163 (210)
                      ++|+|++|.+ +++.++.+|..+|+   +++.|++  ++++|++.++++.++.     -+++-.+. -|+.. +.++.+.
T Consensus       157 i~v~Vl~P~g~vs~~Q~~Qm~t~g~~Nv~vi~V~G--~fDd~q~~vk~~~~d~~~~~~~~l~saNS-iN~~R-i~~Q~~y  232 (460)
T cd01560         157 VDVVVLYPKGGVSPIQELQMTTLPADNVHVVAVEG--DFDDCQSLVKALFADEDFNKKLKLSSANS-INWAR-ILAQIVY  232 (460)
T ss_pred             CEEEEEEcCCCCCHHHHHHHHhhCCCceEEEEEcC--CHHHHHHHHHHHhcChhhHhcceEEEEec-cCHHH-HHHHHHH
Confidence            9999999996 99999999999996   7777775  5899999988876542     13343343 46666 6799999


Q ss_pred             HHHHHHhhCC----CCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          164 GPEIWQDSGG----KVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       164 ~~Ei~~q~~~----~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      ++|+++|+..    .||.|+||+|+||.+.|.+.+.+...|--++|+++
T Consensus       233 yf~a~~ql~~~~~~~p~~~vVPtGnfgni~a~~~Ak~mGlpi~kli~a~  281 (460)
T cd01560         233 YFYAYLQLLKRGEGEKVEFSVPTGNFGNILAGYYAKKMGLPIKKLIVAT  281 (460)
T ss_pred             HHHHHHHhccccCCCCCEEEEECCcHHHHHHHHHHHHcCCCCccEEEEe
Confidence            9999999963    58999999999999999999976656655777653

The conversion of O-phosphohomoserine into threonine and inorganic phosphate is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD includes members from higher plants, cyanobacteria, archaebacteria and eubacterial groups. This CD, Thr-synth_2, includes enzymes from fungi and eubacterial groups, as well as, metazoan threonine synthase-like proteins.

>COG1350 Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) [General function prediction only]

Probab=99.92  E-value=2.4e-24  Score=177.46  Aligned_cols=197  Identities=20%  Similarity=0.219  Sum_probs=154.5

Q ss_pred             hhHhhhccccCCceeecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGL   84 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~al   84 (210)
                      +.+.....-++|||++.++|.+.++  ++||.|.|+..||||||...|......+..+|.    +..+.+...|.+|.|+
T Consensus        68 v~e~Y~~~gRPTPL~RA~~LE~~L~tparIYyK~Eg~tptGSHKiNTAlAqaYyak~eg~----~rl~TETGAGQWGsAl  143 (432)
T COG1350          68 VREAYLQIGRPTPLIRAKNLEEALGTPARIYYKYEGVTPTGSHKINTALAQAYYAKKEGA----KRLTTETGAGQWGSAL  143 (432)
T ss_pred             HHHHHHHhCCCCchhhhhhHHHHhCCCcEEEEEecccCCCCCCCcchHHHHHHHHHhcCc----eeeecccCCchHHHHH
Confidence            4444444557999999999987665  799999999999999999999999999999986    2444455669999999


Q ss_pred             HHHHHHcCCcEEEEEcCC---CCHHHHHHHHHcCCEEEEECCCCC----------------HHHHHHHHHHHHHhCCCeE
Q 028372           85 AFIAAARGYNLIIVMPST---CSMERRIVLRALGAEIILADSALR----------------FEEILEKGEEILKKTPDGY  145 (210)
Q Consensus        85 A~~a~~~g~~~~vvvp~~---~~~~~~~~~~~~Ga~v~~v~~~~~----------------~~~~~~~a~~~~~~~~~~~  145 (210)
                      +++|+.+|++|+|||-..   ..+-++.+|+.+||+|+..+.+.+                +-=+++.|-+.+-++++..
T Consensus       144 slA~alf~lk~~V~Mvr~Sy~qKpyRk~lM~~yGa~V~pSPS~~Te~Grk~l~e~p~hPGSLGIAISEAiE~al~~~~~k  223 (432)
T COG1350         144 SLAAALFGLKATVFMVRVSYYQKPYRKYLMELYGAEVVPSPSELTEFGRKILKEDPDHPGSLGIAISEAIEYALKNENTK  223 (432)
T ss_pred             HHHHHHhCceeEEEEEehhhhcchHHHHHHHHhCCeecCCCcchhHHHHHHHhcCCCCCchhHHHHHHHHHHHHhCCCce
Confidence            999999999999999763   467888999999999998875421                1225667767666666677


Q ss_pred             EcCCCCCChhHHHHHHhHHHHHHHhh---CCCCCEEEEccCchhHHHHHHHHHHhc--C--CCCEEEEEE
Q 028372          146 LLRQFENPANPKIHYETTGPEIWQDS---GGKVDAFISGIGTGGTVTGAGRFLKEN--N--PDIKVVLRV  208 (210)
Q Consensus       146 ~~~~~~n~~~~~~g~~t~~~Ei~~q~---~~~~d~vv~pvG~Gg~~~Gi~~~~k~~--~--~~~~vigv~  208 (210)
                      |..+.--.. ...|+..+|.|..+|+   +..||++|.|||+|+.++|+..-|-..  .  ..+++|+|-
T Consensus       224 Y~lGSVlnh-vllhQTViGlEakkQle~~~e~PDv~igcvGGGSNfag~~yPfi~d~l~g~~~~~fiAve  292 (432)
T COG1350         224 YSLGSVLNH-VLLHQTVIGLEAKKQLEQAGEDPDVIIGCVGGGSNFAGLTYPFIGDKLRGKKETRFIAVE  292 (432)
T ss_pred             ecchhHHHH-HHHHHHHHhHHHHHHHHhcCCCCCEEEEeccCCCccccccchhhhhhhcCCceeEEEEeC
Confidence            766543333 2679999999995554   567999999999999999998877432  1  237788763

>KOG1395 consensus Tryptophan synthase beta chain [Amino acid transport and metabolism]

Probab=99.91  E-value=3.7e-24  Score=177.70  Aligned_cols=198  Identities=18%  Similarity=0.173  Sum_probs=148.1

Q ss_pred             hhhhHhhh-ccccCCceeecccccCCC--CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchH
Q 028372            5 NAIKRDVT-ELIGNTPMVYLNNVVDGC--VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTG   81 (210)
Q Consensus         5 ~~~~~~i~-~~~~~TPl~~~~~l~~~~--~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g   81 (210)
                      +.-+..|. -.-++|||++.++|.+.+  |++||+|+|++||+||||...+...+..+.+.|+    +..|.+...|.||
T Consensus       109 ~ee~~eiy~y~gRpspL~~AkRLte~~q~ga~IylKrEdlnh~GsHKiNnav~QallakrlGk----knviaETGAGQhG  184 (477)
T KOG1395|consen  109 WEEFLEIYKYLGRPSPLIRAKRLTEHCQTGARIYLKREDLNHTGSHKINNAVAQALLAKRLGK----KNVIAETGAGQHG  184 (477)
T ss_pred             HHHHHHHHHHcCCCchhHHHHHHHHHhCCCCEEEEEecCCCccccCCcccHHHHHHHHHHhcc----cceeeccCCCccc
Confidence            34444444 445679999999998765  4899999999999999999999999999999987    4566677789999


Q ss_pred             HHHHHHHHHcCCcEEEEEcCC---CCHHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHHHHH-hCCCeEEcCCCCC----
Q 028372           82 VGLAFIAAARGYNLIIVMPST---CSMERRIVLRALGAEIILADS-ALRFEEILEKGEEILK-KTPDGYLLRQFEN----  152 (210)
Q Consensus        82 ~alA~~a~~~g~~~~vvvp~~---~~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~~~~-~~~~~~~~~~~~n----  152 (210)
                      .|+|.+|+++|++|+|+|-.+   ..+.++-+||.+||+|+.+.. ...+.++-+.+-++.- ..+-.+|+-....    
T Consensus       185 vatA~a~a~FGl~C~v~mgAed~~rqalnvfrmrllGAkV~pv~sGt~tLrda~sea~r~wvt~~ett~y~~gs~~gphp  264 (477)
T KOG1395|consen  185 VATATACAKFGLDCTVYMGAEDYRRQALNVFRMRLLGAKVHPVTSGTRTLRDATSEAGRLWVTNSETTHYAAGSAIGPHP  264 (477)
T ss_pred             hHHHHHHHHhCCceEEEechhHHHHHHHHHHHHHHhCceEeecCCCceehhcccchhhhhhhhhhheeeeeecccCCCCC
Confidence            999999999999999999764   367888999999999999874 3345555555544322 2223445433321    


Q ss_pred             -ChhHHHHHHhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEE
Q 028372          153 -PANPKIHYETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLR  207 (210)
Q Consensus       153 -~~~~~~g~~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv  207 (210)
                       |......+++|+-|-..|.    +..||+||.|+|+|+..+|+..-|..-. .++.|||
T Consensus       265 ~pt~vr~fhsvIg~Et~~Q~me~~g~~PD~vvaCvGGGSN~~Glf~pF~~dk-~v~~igv  323 (477)
T KOG1395|consen  265 YPTVVRTFHSVIGKETKIQQMEKFGKLPDAVVACVGGGSNSAGLFSPFIRDK-SVGMIGV  323 (477)
T ss_pred             cHHHHHHHHHHHhHHHHHHHHHHhCCCCCeEEEeccCCCccccccchhhccc-hhheeee
Confidence             2222345678888876664    4569999999999999999998886432 3555554

>COG3048 DsdA D-serine dehydratase [Amino acid transport and metabolism]

Probab=99.80  E-value=1.1e-18  Score=143.02  Aligned_cols=191  Identities=18%  Similarity=0.258  Sum_probs=156.9

Q ss_pred             hccccCCceeeccccc--------CCCCceEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCC---------
Q 028372           12 TELIGNTPMVYLNNVV--------DGCVARIAAKLETMEP-CSSVKDRIAYSMIKD-----AEDKGLITPG---------   68 (210)
Q Consensus        12 ~~~~~~TPl~~~~~l~--------~~~~~~i~~K~E~~~p-tGS~K~R~a~~~~~~-----a~~~g~~~~~---------   68 (210)
                      ..++...||++.+.+.        +....++|+|+++.-| +||+|.|+..|-+..     |.+.|.++-.         
T Consensus        73 ~~GiIES~lv~i~~mq~~Le~~Y~~~i~G~llLK~DshLpIsGSIKARGGIYEVL~hAE~LAle~Gll~~~DDYs~L~~~  152 (443)
T COG3048          73 TGGIIESPLVEIPAMQKRLEKEYQQPIPGRLLLKKDSHLPISGSIKARGGIYEVLKHAEKLALEAGLLTLEDDYSILLSE  152 (443)
T ss_pred             cCCeeccchhhhHHHHHHHHHHhcCCCCcceeeeccCCCCcccceeccccHHHHHHHHHHHHHhcCcccccchHHHhhcH
Confidence            3456678888887543        2333589999999998 699999998887753     4566665432         


Q ss_pred             -------CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhC
Q 028372           69 -------KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKT  141 (210)
Q Consensus        69 -------~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~  141 (210)
                             .-.|...|+||.|.++..+++.+|+++++.|+.++.++|.+++|..|.+|+..+.  +|..+.+.-++-++.+
T Consensus       153 ~f~~FFs~ysIaVGSTGNLGlSIGI~sA~lGF~vtVHMSADAr~WKKd~LRs~gV~ViEYe~--DY~~AVeeGRk~a~~D  230 (443)
T COG3048         153 EFKDFFSRYSIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARAWKKDKLRSHGVTVVEYEQ--DYGVAVEEGRKEAESD  230 (443)
T ss_pred             HHHHHHHhheEeecccCccceehhhhhhhhcceEEEEecchHHHHHHHHHHhcCceEEEecc--hhhHHHHHhhhhhccC
Confidence                   2367889999999999999999999999999999999999999999999999985  4888999999999999


Q ss_pred             CCeEEcCCCCCChhHHHHHHhHHHHHHHhhC--------CCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEE
Q 028372          142 PDGYLLRQFENPANPKIHYETTGPEIWQDSG--------GKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVV  205 (210)
Q Consensus       142 ~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~--------~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vi  205 (210)
                      |.+||++.-++... .-||...+..+-.|++        ..|-.|..|+|-||.-.|++.++|... .++.++
T Consensus       231 P~c~FiDDE~S~~L-FLGYaVAa~Rlk~Q~d~~gi~vd~ehPLfVylPCGVGGgPGGVafGLKl~fgd~Vhcf  302 (443)
T COG3048         231 PNCFFIDDENSRTL-FLGYAVAAQRLKKQFDEQGIVVDAEHPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCF  302 (443)
T ss_pred             CceEEecccchhhh-hhhHHHHHHHHHHHHHhcCceecCCCceEEEeecCCCCCcchhhhhhHhhhcCceEEE
Confidence            99999987544443 6799999999999984        246689999999999999999999764 455554

>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli

Probab=93.68  E-value=0.58  Score=36.17  Aligned_cols=101  Identities=16%  Similarity=0.109  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHcCCcE-EEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHH
Q 028372           81 GVGLAFIAAARGYNL-IIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIH  159 (210)
Q Consensus        81 g~alA~~a~~~g~~~-~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g  159 (210)
                      |..+.++++.+|.++ .-+.+.+.-..-.+.+...|-.|.+++++  -+.....++.+.+..|+.-.+.-+..+.+ ..-
T Consensus        13 G~~i~~~~~~~g~~~~~rv~g~dl~~~l~~~~~~~~~~ifllG~~--~~~~~~~~~~l~~~yP~l~ivg~~~g~f~-~~~   89 (172)
T PF03808_consen   13 GMPIVWAARLLGRPLPERVTGSDLFPDLLRRAEQRGKRIFLLGGS--EEVLEKAAANLRRRYPGLRIVGYHHGYFD-EEE   89 (172)
T ss_pred             CHHHHHHHHHcCCCCCcccCHHHHHHHHHHHHHHcCCeEEEEeCC--HHHHHHHHHHHHHHCCCeEEEEecCCCCC-hhh
Confidence            467889999999887 33333333455566677788899999975  24445566777777765433321111122 111


Q ss_pred             HHhHHHHHHHhhCCCCCEEEEccCchhH
Q 028372          160 YETTGPEIWQDSGGKVDAFISGIGTGGT  187 (210)
Q Consensus       160 ~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~  187 (210)
                      ...+..+|-+   .+||.|+++.|+---
T Consensus        90 ~~~i~~~I~~---~~pdiv~vglG~PkQ  114 (172)
T PF03808_consen   90 EEAIINRINA---SGPDIVFVGLGAPKQ  114 (172)
T ss_pred             HHHHHHHHHH---cCCCEEEEECCCCHH
Confidence            2233333322   368999999998643

Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.67  E-value=1.1  Score=32.16  Aligned_cols=41  Identities=27%  Similarity=0.288  Sum_probs=26.0

Q ss_pred             HHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           81 GVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        81 g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      |......|+.+|.+++++.+   .+.+++.++.+|++.+....+
T Consensus         3 G~~a~q~ak~~G~~vi~~~~---~~~k~~~~~~~Ga~~~~~~~~   43 (130)
T PF00107_consen    3 GLMAIQLAKAMGAKVIATDR---SEEKLELAKELGADHVIDYSD   43 (130)
T ss_dssp             HHHHHHHHHHTTSEEEEEES---SHHHHHHHHHTTESEEEETTT
T ss_pred             HHHHHHHHHHcCCEEEEEEC---CHHHHHHHHhhcccccccccc
Confidence            55666677778855444443   566777777788766655543

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK12743 oxidoreductase; Provisional

Probab=92.46  E-value=1.8  Score=34.97  Aligned_cols=54  Identities=17%  Similarity=0.289  Sum_probs=37.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++.+|+.++|.-|.++|......|.+++++...+..  ....+.++.+|.++..+.
T Consensus         3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   58 (256)
T PRK12743          3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQ   58 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEE
Confidence            367888889999999999988899988776544322  222345556676666544

>PRK05993 short chain dehydrogenase; Provisional

Probab=92.45  E-value=3.3  Score=33.97  Aligned_cols=52  Identities=23%  Similarity=0.208  Sum_probs=36.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|.-|.++|......|.+++++...   ..+.+.+...+.+.+.++-
T Consensus         5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~---~~~~~~l~~~~~~~~~~Dl   56 (277)
T PRK05993          5 RSILITGCSSGIGAYCARALQSDGWRVFATCRK---EEDVAALEAEGLEAFQLDY   56 (277)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHCCceEEEccC
Confidence            467888889999999998888889987776543   3334444445555555553

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=92.20  E-value=3.8  Score=38.31  Aligned_cols=51  Identities=16%  Similarity=0.270  Sum_probs=39.7

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ..++....|..|+.+|-.-+..|++++++   +.++.+.+.++.+|.+++.=|.
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~~vvvI---D~d~~~v~~~~~~g~~v~~GDa  451 (621)
T PRK03562        401 PRVIIAGFGRFGQIVGRLLLSSGVKMTVL---DHDPDHIETLRKFGMKVFYGDA  451 (621)
T ss_pred             CcEEEEecChHHHHHHHHHHhCCCCEEEE---ECCHHHHHHHHhcCCeEEEEeC
Confidence            56888999999999999988889998776   2345567777777877766654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=91.89  E-value=3.1  Score=33.60  Aligned_cols=53  Identities=23%  Similarity=0.275  Sum_probs=37.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..++.-|.++|......|.+++++-... .+...+.++..|.++..+.
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~-~~~~~~~~~~~~~~~~~~~   61 (251)
T PRK12481          9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE-APETQAQVEALGRKFHFIT   61 (251)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch-HHHHHHHHHHcCCeEEEEE
Confidence            4778999999999999999888999987764332 2333445566677766544

>PRK08628 short chain dehydrogenase; Provisional

Probab=91.65  E-value=3.6  Score=33.13  Aligned_cols=54  Identities=20%  Similarity=0.169  Sum_probs=37.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|-.|.++|..-...|.+++++..+.......+.++..|.++..+.
T Consensus         8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~   61 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQ   61 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEE
Confidence            477888888999999999988889998877654333333344555566655444

>TIGR01064 pyruv_kin pyruvate kinase

Probab=91.42  E-value=6  Score=35.76  Aligned_cols=119  Identities=11%  Similarity=0.117  Sum_probs=72.9

Q ss_pred             HHHHHHHcCCcEEEEE-----------cCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHHhCCCeE---
Q 028372           84 LAFIAAARGYNLIIVM-----------PSTCSMERRIVLRALGAEIILADSAL---R-FEEILEKGEEILKKTPDGY---  145 (210)
Q Consensus        84 lA~~a~~~g~~~~vvv-----------p~~~~~~~~~~~~~~Ga~v~~v~~~~---~-~~~~~~~a~~~~~~~~~~~---  145 (210)
                      +..+|+..|.++.+..           |..+...........|++.+....+.   . -.++.+...+.+++-+..+   
T Consensus       262 ii~aaraag~pvi~atqmLeSM~~~p~PTRAe~~dv~~~v~~G~d~v~ls~eta~G~yP~~~v~~m~~I~~~~E~~~~~~  341 (473)
T TIGR01064       262 MIRKCNRAGKPVITATQMLDSMIKNPRPTRAEVSDVANAILDGTDAVMLSGETAKGKYPVEAVKMMAKIAKEAEKALAYL  341 (473)
T ss_pred             HHHHHHHcCCCEEEEChhhhhhhcCCCCCcccHHHHHHHHHcCCCEEEEcchhhcCCCHHHHHHHHHHHHHHHHhccchh
Confidence            4557899999988875           34455667777777899998886542   1 2345555555444322211   


Q ss_pred             --EcCCCC-CC--hhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          146 --LLRQFE-NP--ANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       146 --~~~~~~-n~--~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                        |-.+.. ..  ..........+.++.+.+  +.++||+..-||.++--+++    ..|++.|++++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~ia~~a~~~a~~~--~akaIVv~T~SG~TA~~vSr----~rp~~PIiAvT  403 (473)
T TIGR01064       342 TNFNDRKNSDPKPSTITEAIALSAVEAAEKL--DAKAIVVLTESGRTARLLSK----YRPNAPIIAVT  403 (473)
T ss_pred             hhhhhhhcccccCCChHHHHHHHHHHHHhhc--CCCEEEEEcCChHHHHHHHh----hCCCCCEEEEc
Confidence              111100 00  011223444556777776  46899999999999655544    58999999986

This enzyme is a homotetramer. Some forms are active only in the presence of fructose-1,6-bisphosphate or similar phosphorylated sugars.

>PRK08226 short chain dehydrogenase; Provisional

Probab=91.38  E-value=3.1  Score=33.64  Aligned_cols=54  Identities=28%  Similarity=0.179  Sum_probs=35.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++.+|+..+|.-|.++|......|.+++++-.........+.+...|.++..+.
T Consensus         7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~   60 (263)
T PRK08226          7 KTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVV   60 (263)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEE
Confidence            477888899999999999988889987766443221122233344455554443

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=91.07  E-value=3.6  Score=35.17  Aligned_cols=58  Identities=28%  Similarity=0.463  Sum_probs=44.4

Q ss_pred             cCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        62 ~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .+.+++|++.+|.+.+|.-|..+.-.|+.+|..+++.+.   +..|.+.++.+||+.+..-
T Consensus       137 ~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~---s~~k~~~~~~lGAd~vi~y  194 (326)
T COG0604         137 RAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVS---SSEKLELLKELGADHVINY  194 (326)
T ss_pred             hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEec---CHHHHHHHHhcCCCEEEcC
Confidence            466778888899999999999999999999984444433   3356668899999766653

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=91.05  E-value=4.4  Score=33.79  Aligned_cols=58  Identities=21%  Similarity=0.293  Sum_probs=42.9

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      +.+.+++|+..+|...+|..|.++.-.|+.+|.+++++.+   ++.+.+.++.+|++-+..
T Consensus       137 ~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~---s~~~~~~l~~~Ga~~vi~  194 (329)
T cd08294         137 EICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAG---SDDKVAWLKELGFDAVFN  194 (329)
T ss_pred             HhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEEe
Confidence            4455677767777777899999999999999998655543   456777788888854443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins

Probab=90.92  E-value=2.7  Score=32.42  Aligned_cols=116  Identities=16%  Similarity=0.119  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHcCCcEEEEEcC-CCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEc---CCCCCChhH
Q 028372           81 GVGLAFIAAARGYNLIIVMPS-TCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLL---RQFENPANP  156 (210)
Q Consensus        81 g~alA~~a~~~g~~~~vvvp~-~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~---~~~~n~~~~  156 (210)
                      |..+.++++.+|.+..--++. +.-..-.+.+...+..|.+++..  -+.....++.+.++.|+...+   +++.++.. 
T Consensus        11 G~~l~~~~~~~~~~~~~r~~g~dl~~~ll~~~~~~~~~v~llG~~--~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~-   87 (171)
T cd06533          11 GIGVVWAARLLGGPLPERVTGSDLMPALLELAAQKGLRVFLLGAK--PEVLEKAAERLRARYPGLKIVGYHHGYFGPEE-   87 (171)
T ss_pred             cHHHHHHHHHcCCCCCcccCcHHHHHHHHHHHHHcCCeEEEECCC--HHHHHHHHHHHHHHCCCcEEEEecCCCCChhh-
Confidence            467889999999873222222 12234455566678999999875  244444556677777764433   33332221 


Q ss_pred             HHHHHhHHHHHHHhhC-CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEE
Q 028372          157 KIHYETTGPEIWQDSG-GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLR  207 (210)
Q Consensus       157 ~~g~~t~~~Ei~~q~~-~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv  207 (210)
                         .    .+|++++. .+||.|++++|+---= -.....+...+..-+++|
T Consensus        88 ---~----~~i~~~I~~~~pdiv~vglG~PkQE-~~~~~~~~~l~~~v~~~v  131 (171)
T cd06533          88 ---E----EEIIERINASGADILFVGLGAPKQE-LWIARHKDRLPVPVAIGV  131 (171)
T ss_pred             ---H----HHHHHHHHHcCCCEEEEECCCCHHH-HHHHHHHHHCCCCEEEEe
Confidence               1    12444443 3699999999985432 223334444444444443

E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=90.89  E-value=6.2  Score=31.78  Aligned_cols=54  Identities=19%  Similarity=0.236  Sum_probs=38.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|.-|.++|......|.+++++ .........+.++..+.++..+..
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~-~~~~~~~~~~~~~~~~~~~~~~~~   64 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGI-NIVEPTETIEQVTALGRRFLSLTA   64 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEe-cCcchHHHHHHHHhcCCeEEEEEC
Confidence            477899999999999999988899987765 322234444555666766665543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=90.80  E-value=11  Score=33.25  Aligned_cols=58  Identities=21%  Similarity=0.213  Sum_probs=37.1

Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHcCCCCC-CCeEEEeeCCCchHHH--HHHHHHHcCCcEEEEE
Q 028372           39 ETMEPCSSVKDRIAYSMIKDAEDKGLITP-GKTTLIEVTSGNTGVG--LAFIAAARGYNLIIVM   99 (210)
Q Consensus        39 E~~~ptGS~K~R~a~~~~~~a~~~g~~~~-~~~~vv~~ssGN~g~a--lA~~a~~~g~~~~vvv   99 (210)
                      -+.+|.|.-  +.....+...+.+|.+.. ++..+|+..++..|.|  +|.+. ..|.+++++.
T Consensus        13 ~~~hp~gc~--~~v~~qi~~~~~~~~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~   73 (398)
T PRK13656         13 TTAHPVGCE--ANVKEQIEYVKAQGPIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVF   73 (398)
T ss_pred             CCCCCHHHH--HHHHHHHHHHHhcCCcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEe
Confidence            355788863  345677777777877644 3566777777666666  44455 5677766654

>PRK06182 short chain dehydrogenase; Validated

Probab=90.79  E-value=6.7  Score=31.94  Aligned_cols=52  Identities=25%  Similarity=0.272  Sum_probs=36.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+.++|.-|.++|......|.+++++...   ..+++.+...+.+++.++-
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~---~~~l~~~~~~~~~~~~~Dv   55 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARR---VDKMEDLASLGVHPLSLDV   55 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHhCCCeEEEeeC
Confidence            467888888999999999988889988776543   2334444445556555554

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=90.77  E-value=5.4  Score=31.74  Aligned_cols=50  Identities=30%  Similarity=0.472  Sum_probs=40.9

Q ss_pred             EEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +|...+|+.|..++.+....+.++++++++. +....+.++..|++++..+
T Consensus         2 ~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~-~~~~~~~l~~~g~~vv~~d   51 (233)
T PF05368_consen    2 LVTGATGNQGRSVVRALLSAGFSVRALVRDP-SSDRAQQLQALGAEVVEAD   51 (233)
T ss_dssp             EEETTTSHHHHHHHHHHHHTTGCEEEEESSS-HHHHHHHHHHTTTEEEES-
T ss_pred             EEECCccHHHHHHHHHHHhCCCCcEEEEecc-chhhhhhhhcccceEeecc
Confidence            5778899999999999888999999999877 4455667788899988555

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08862 short chain dehydrogenase; Provisional

Probab=90.70  E-value=3.9  Score=32.73  Aligned_cols=54  Identities=17%  Similarity=0.112  Sum_probs=35.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..++.-|.++|......|.+++++-..... ....+.++..|.+++.+.
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~   60 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQ   60 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEE
Confidence            467888888889999999988899987776443221 122344555676665443

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=90.60  E-value=5.4  Score=31.85  Aligned_cols=54  Identities=22%  Similarity=0.267  Sum_probs=37.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ++.+|+..+|.-|.++|......|.+++++.... .....+.++..+.++..+..
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~-~~~~~~~~~~~~~~~~~~~~   59 (248)
T TIGR01832         6 KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE-PSETQQQVEALGRRFLSLTA   59 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHhcCCceEEEEC
Confidence            4778888889999999999888999877765432 23334455566666655543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=90.57  E-value=2.3  Score=36.28  Aligned_cols=54  Identities=17%  Similarity=0.283  Sum_probs=41.7

Q ss_pred             CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        65 ~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      .+++.+.+|. ..|..|...+..++.+|.+++++.+...++.+++.++.+|++.+
T Consensus       170 ~~~g~~vlI~-G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v  223 (355)
T cd08230         170 TWNPRRALVL-GAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV  223 (355)
T ss_pred             cCCCCEEEEE-CCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe
Confidence            3455555555 56999999999999999987766655557888899999999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF00764 Arginosuc_synth: Arginosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6

Probab=90.56  E-value=3.7  Score=36.07  Aligned_cols=127  Identities=20%  Similarity=0.252  Sum_probs=72.9

Q ss_pred             EEeeCCC-chHHHHHHHHHHcCCcEEEEEcC-CCC----HHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHHHHHhCCCe
Q 028372           72 LIEVTSG-NTGVGLAFIAAARGYNLIIVMPS-TCS----MERRIVLRALGA-EIILADSALRFEEILEKGEEILKKTPDG  144 (210)
Q Consensus        72 vv~~ssG-N~g~alA~~a~~~g~~~~vvvp~-~~~----~~~~~~~~~~Ga-~v~~v~~~~~~~~~~~~a~~~~~~~~~~  144 (210)
                      |+.+|+| .+-..+.+.....+++++.|.-+ .-+    ..-.+....+|| +++.++....+.  .+.....-+.  +.
T Consensus         1 VLAySGGLDTS~~l~~L~e~~~~~Via~~aDlGq~~~d~~~i~~kA~~~Ga~~~~vvD~r~ef~--~~~i~~aI~a--nA   76 (388)
T PF00764_consen    1 VLAYSGGLDTSVILKWLKEEGGYEVIAVTADLGQPDEDLEAIEEKALKLGASKHIVVDARDEFA--EDYIFPAIKA--NA   76 (388)
T ss_dssp             EEE--SSHHHHHHHHHHHHTTTEEEEEEEEESSST-S-HHHHHHHHHHHT-SEEEEEE-HHHHH--HHTHHHHHHT--T-
T ss_pred             CeeeCCChHHHHHHHHHHhhcCceEEEEEEECCCcHHHHHHHHHHHHhcCCceeeecchHHHHH--HHHHHHHHHH--HH
Confidence            3456776 56667778888888999988754 222    334455678899 999998642221  1222222121  23


Q ss_pred             EEcCCCC---CChhHHHHHHhHHHHHHHhhCCCCCEEEE-ccCchhHHHHHHHHHHhcCCCCEEEE
Q 028372          145 YLLRQFE---NPANPKIHYETTGPEIWQDSGGKVDAFIS-GIGTGGTVTGAGRFLKENNPDIKVVL  206 (210)
Q Consensus       145 ~~~~~~~---n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~-pvG~Gg~~~Gi~~~~k~~~~~~~vig  206 (210)
                      .|-..|-   ....|.  .+....|++++.  ..++|.. +.|-|-...=.-.+++.+.|+.+|++
T Consensus        77 ~Yeg~YpL~tsl~Rpl--Ia~~~v~~A~~~--ga~~vaHG~TgkGNDqvRFe~~~~al~P~l~via  138 (388)
T PF00764_consen   77 LYEGRYPLSTSLARPL--IAKKLVEVAREE--GADAVAHGCTGKGNDQVRFELSIRALAPELKVIA  138 (388)
T ss_dssp             -BTTTB--CCCCHHHH--HHHHHHHHHHHH--T-SEEE----TTSSHHHHHHHHHHHHSTTSEEE-
T ss_pred             HhCCCccccccchHHH--HHHHHHHHHHHc--CCeEEeccCCcCCCchhHHHHHHHHhCcCCcEec
Confidence            3333331   222222  234556777776  4688888 56889999999999999999999984

3.4.5 from EC) (AS) is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate [, ]. In humans, a defect in the AS gene causes citrullinemia, a genetic disease characterised by severe vomiting spells and mental retardation. AS is a homotetrameric enzyme of chains of about 400 amino-acid residues. An arginine seems to be important for the enzyme's catalytic mechanism. The sequences of AS from various prokaryotes, archaebacteria and eukaryotes show significant similarity.; GO: 0004055 argininosuccinate synthase activity, 0005524 ATP binding, 0006526 arginine biosynthetic process; PDB: 1K97_A 1KP2_A 1K92_A 1KP3_A 2NZ2_A 1VL2_A 1J1Z_D 1KOR_C 1J20_D 1KH2_C ....

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=90.43  E-value=10  Score=34.89  Aligned_cols=52  Identities=27%  Similarity=0.286  Sum_probs=39.5

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      .+++....|+.|+.+|-.-+..|++++++=.   ++.+.+.++..|.+++.-|..
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~---d~~~~~~~~~~g~~~i~GD~~  469 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIET---SRTRVDELRERGIRAVLGNAA  469 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHCCCeEEEcCCC
Confidence            5688899999999999999999999866533   345666667777777766643

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=90.40  E-value=10  Score=35.34  Aligned_cols=51  Identities=16%  Similarity=0.244  Sum_probs=37.5

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      .+++.+..|..|+.+|..-...|++++++=.   ++.+.+.++.+|.+++.=|.
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~~vvvID~---d~~~v~~~~~~g~~v~~GDa  451 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKMRITVLER---DISAVNLMRKYGYKVYYGDA  451 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCCCEEEEEC---CHHHHHHHHhCCCeEEEeeC
Confidence            4588899999999999998889998876532   34556666767766655543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=90.34  E-value=5.6  Score=32.09  Aligned_cols=55  Identities=22%  Similarity=0.289  Sum_probs=37.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++..........+.+...+.++..+..
T Consensus        16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (258)
T PRK06935         16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQV   70 (258)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEc
Confidence            4778889999999999999888999988876652222233344555666654443

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=90.19  E-value=5.1  Score=34.12  Aligned_cols=56  Identities=18%  Similarity=0.294  Sum_probs=39.3

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      .+..++++.+.+|... |..|.+++..|+.+|.+++++   ..++.+++.++.+|++.+.
T Consensus       160 ~~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~---~~~~~~~~~~~~~Ga~~~i  215 (349)
T TIGR03201       160 VQAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAI---DIDPEKLEMMKGFGADLTL  215 (349)
T ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEE---cCCHHHHHHHHHhCCceEe
Confidence            3445667756555554 999999999999999975443   2245677777888886544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK06139 short chain dehydrogenase; Provisional

Probab=90.17  E-value=3.4  Score=35.25  Aligned_cols=54  Identities=26%  Similarity=0.273  Sum_probs=37.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|......|.+++++...... ....+.++..|+++..+.
T Consensus         8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~   62 (330)
T PRK06139          8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVP   62 (330)
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence            467888888999999999988899997776543221 222345566787776544

>PRK08589 short chain dehydrogenase; Validated

Probab=89.94  E-value=4.5  Score=33.10  Aligned_cols=54  Identities=19%  Similarity=0.131  Sum_probs=35.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.........+.++..+.++..+.
T Consensus         7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~   60 (272)
T PRK08589          7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYH   60 (272)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEE
Confidence            477888888889999998888889988877554111222344455565555443

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=89.92  E-value=6.7  Score=30.97  Aligned_cols=33  Identities=33%  Similarity=0.359  Sum_probs=27.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      ++.+|+.++|..|.+++......|.+++++...
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~   38 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYAS   38 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            367888899999999999888889987666654

>PRK07478 short chain dehydrogenase; Provisional

Probab=89.65  E-value=5.5  Score=32.00  Aligned_cols=54  Identities=20%  Similarity=0.211  Sum_probs=34.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|.-|.++|..-...|.+++++...... ......++..|.++..+.
T Consensus         7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~   61 (254)
T PRK07478          7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALA   61 (254)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            467888888999999999888889987766543211 111233444555554443

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=89.62  E-value=5  Score=29.80  Aligned_cols=54  Identities=31%  Similarity=0.344  Sum_probs=37.3

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC----HHHHHHHHHcCCEEEEECC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS----MERRIVLRALGAEIILADS  123 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~----~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ..+|+..++.-|.++|..-...|-..++++..+.+    ....+.++..|.++..+..
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~   59 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIEC   59 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccc
Confidence            56888899999999999977777766666665521    2233445666777776664

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=89.39  E-value=5.9  Score=31.85  Aligned_cols=54  Identities=19%  Similarity=0.139  Sum_probs=34.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++.+|+..+|..|.++|......|.+++++...... ....+.++..|.++..+.
T Consensus        11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~   65 (255)
T PRK07523         11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALA   65 (255)
T ss_pred             CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEE
Confidence            477888899999999999988889987665432211 112233444455555443

>PRK08643 acetoin reductase; Validated

Probab=89.36  E-value=6.9  Score=31.40  Aligned_cols=32  Identities=22%  Similarity=0.287  Sum_probs=26.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+.++|.-|.++|......|.+++++..
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r   34 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDY   34 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888999999999998888988766644

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=89.12  E-value=7.5  Score=33.99  Aligned_cols=56  Identities=27%  Similarity=0.324  Sum_probs=41.7

Q ss_pred             cCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        62 ~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      ...++++.+.+| ...|..|.+++..|+.+|.+.+++...  .+.+++..+.+|++.+.
T Consensus       180 ~~~~~~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~d~--~~~r~~~a~~~Ga~~v~  235 (393)
T TIGR02819       180 TAGVGPGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVGDL--NPARLAQARSFGCETVD  235 (393)
T ss_pred             hcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEeCC--CHHHHHHHHHcCCeEEe
Confidence            355667766555 677999999999999999987664432  46788888889997533

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=89.07  E-value=8.9  Score=30.54  Aligned_cols=54  Identities=22%  Similarity=0.349  Sum_probs=35.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCH--HHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM--ERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~--~~~~~~~~~Ga~v~~v~  122 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++...+...  ...+.++..|.++..+.
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~   60 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVK   60 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEE
Confidence            4678888999999999999888898877654332211  22234455566655544

>PRK05866 short chain dehydrogenase; Provisional

Probab=89.06  E-value=5.6  Score=33.14  Aligned_cols=33  Identities=27%  Similarity=0.246  Sum_probs=26.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      ++.+|+..+|.-|.++|......|.+++++...
T Consensus        41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~   73 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARRGATVVAVARR   73 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            367888888999999999888889888776554

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=88.70  E-value=6.7  Score=31.79  Aligned_cols=54  Identities=22%  Similarity=0.086  Sum_probs=34.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|..|.++|......|.+++++-..... ....+.++..|.++..+.
T Consensus        11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~   65 (265)
T PRK07097         11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYV   65 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence            477889999999999999888889887666322111 112233444455555443

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=88.69  E-value=11  Score=34.29  Aligned_cols=50  Identities=18%  Similarity=0.211  Sum_probs=40.1

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .+|+....|..|.+.+..|+.+|-+++++   +..+.++++.+.+|++.+.++
T Consensus       166 ~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~---D~~~~rle~aeslGA~~v~i~  215 (509)
T PRK09424        166 AKVLVIGAGVAGLAAIGAAGSLGAIVRAF---DTRPEVAEQVESMGAEFLELD  215 (509)
T ss_pred             CEEEEECCcHHHHHHHHHHHHCCCEEEEE---eCCHHHHHHHHHcCCeEEEec
Confidence            56888999999999999999999853332   346788889999999976554

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=88.31  E-value=8.6  Score=30.52  Aligned_cols=54  Identities=19%  Similarity=0.201  Sum_probs=35.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++.+|+.++|..|.+++..-...|.+++++...... ....+.++..+.++..+.
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   61 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ   61 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE
Confidence            467888899999999999888889887776554221 222334455555555444

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=88.29  E-value=4.6  Score=34.19  Aligned_cols=88  Identities=24%  Similarity=0.292  Sum_probs=59.8

Q ss_pred             eEEEEeCCCCC-----CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HH
Q 028372           33 RIAAKLETMEP-----CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-ME  106 (210)
Q Consensus        33 ~i~~K~E~~~p-----tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~  106 (210)
                      +-++|.++.-|     |-|.---.|+-|+.+-.+-   .+|...+--++.+--|+++--.|+.+|++.+-++++... ..
T Consensus       124 ~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L---~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~iee  200 (354)
T KOG0025|consen  124 SDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQL---NKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEE  200 (354)
T ss_pred             cceEEcCCcCChhhhheeccCchHHHHHHHHHHhc---CCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHH
Confidence            46677776444     3345555677888887653   345332333333455667777899999999999988654 45


Q ss_pred             HHHHHHHcCCEEEEECC
Q 028372          107 RRIVLRALGAEIILADS  123 (210)
Q Consensus       107 ~~~~~~~~Ga~v~~v~~  123 (210)
                      ..++++.+||+-+..+.
T Consensus       201 l~~~Lk~lGA~~ViTee  217 (354)
T KOG0025|consen  201 LKKQLKSLGATEVITEE  217 (354)
T ss_pred             HHHHHHHcCCceEecHH
Confidence            56788999999888764

>PRK08278 short chain dehydrogenase; Provisional

Probab=88.18  E-value=11  Score=30.77  Aligned_cols=34  Identities=32%  Similarity=0.444  Sum_probs=28.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +..+|+..+|--|.++|......|.+++++....
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~   40 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTA   40 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence            4678888889999999999889999988876543

>PRK12937 short chain dehydrogenase; Provisional

Probab=88.17  E-value=11  Score=29.96  Aligned_cols=55  Identities=20%  Similarity=0.272  Sum_probs=38.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|..|.++|..-...|.+++++.....+  ....+.++..+.++..+..
T Consensus         6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   62 (245)
T PRK12937          6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA   62 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEEC
Confidence            467888899999999999988899988776544321  1223445556777666554

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=88.11  E-value=8.3  Score=30.57  Aligned_cols=33  Identities=24%  Similarity=0.310  Sum_probs=26.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+.++|..|.+++......|.+++++..+
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~   40 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGVNVGLLART   40 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            367888888999999998888889877776543

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=88.07  E-value=8.6  Score=32.20  Aligned_cols=58  Identities=21%  Similarity=0.338  Sum_probs=43.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      +.+.+++|...+|.+.+|..|.+++..|+.+|.+++++.+   +..+.+.++.+|++.+..
T Consensus       132 ~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~---s~~~~~~~~~lGa~~vi~  189 (325)
T TIGR02825       132 EICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKVAYLKKLGFDVAFN  189 (325)
T ss_pred             HHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEEe
Confidence            4556777767667777899999999999999998665543   456777888899865443

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=88.02  E-value=8.5  Score=30.64  Aligned_cols=55  Identities=15%  Similarity=0.172  Sum_probs=36.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|--|.++|......|.++++.......  +...+.++..|.++..+..
T Consensus         7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~   63 (247)
T PRK12935          7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQA   63 (247)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEEC
Confidence            477888889999999999888889887765433211  1222344555666665554

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=88.00  E-value=8.6  Score=31.35  Aligned_cols=32  Identities=25%  Similarity=0.207  Sum_probs=26.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|..|.++|......|.+++++..
T Consensus        11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r   42 (278)
T PRK08277         11 KVAVITGGGGVLGGAMAKELARAGAKVAILDR   42 (278)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888899999999998888998776654

>PRK08703 short chain dehydrogenase; Provisional

Probab=87.89  E-value=8.1  Score=30.70  Aligned_cols=32  Identities=34%  Similarity=0.322  Sum_probs=26.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++.+|+.++|..|.++|......|.+++++.+
T Consensus         7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r   38 (239)
T PRK08703          7 KTILVTGASQGLGEQVAKAYAAAGATVILVAR   38 (239)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence            46788999999999999988888888666544

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=87.68  E-value=6.8  Score=31.52  Aligned_cols=72  Identities=22%  Similarity=0.252  Sum_probs=45.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK  140 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~  140 (210)
                      +..+|+..+|.-|.++|......|.+++++-.........+.++..|.++..+..+ .+.++..+..++..++
T Consensus         9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            47789999999999999998889998877654332223334455567776654432 1234444444554443

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=87.49  E-value=5.3  Score=34.26  Aligned_cols=61  Identities=23%  Similarity=0.359  Sum_probs=45.6

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +.+.| +.||+..-|..-+| .|.---.+|+..|++++++-.  .+..|.+.++.+||+......
T Consensus       174 Lk~~g-~~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~--~~~kkeea~~~LGAd~fv~~~  234 (360)
T KOG0023|consen  174 LKRSG-LGPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVIST--SSKKKEEAIKSLGADVFVDST  234 (360)
T ss_pred             hHHcC-CCCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeC--CchhHHHHHHhcCcceeEEec
Confidence            34555 45887766666666 776666779999999999843  345678889999999988765

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=87.48  E-value=10  Score=31.99  Aligned_cols=57  Identities=21%  Similarity=0.256  Sum_probs=42.6

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHH-cCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~-~Ga~v~~  120 (210)
                      +.+.+++|+..+|.+.+|..|.+++-.|+.+|.++++..+   +..+.+.++. +|++-+.
T Consensus       145 ~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~---~~~~~~~~~~~lGa~~vi  202 (338)
T cd08295         145 EVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAG---SDEKVDLLKNKLGFDDAF  202 (338)
T ss_pred             HhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHhcCCceeE
Confidence            3456777878788777899999999999999998655443   4567777776 8885443

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=87.44  E-value=12  Score=29.37  Aligned_cols=54  Identities=30%  Similarity=0.289  Sum_probs=34.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHH-HHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSME-RRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~-~~~~~~~~Ga~v~~v~  122 (210)
                      ++.+|+..+|..|..++..-...|.+++++........ ....++..|.++..+.
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~   60 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV   60 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEE
Confidence            46788889999999999998888998766654422211 1233344555555443

>PRK06194 hypothetical protein; Provisional

Probab=87.43  E-value=10  Score=30.99  Aligned_cols=55  Identities=27%  Similarity=0.312  Sum_probs=35.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ++.+|+..+|.-|.++|......|.+++++-..... ......+...|.++..+..
T Consensus         7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   62 (287)
T PRK06194          7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRT   62 (287)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEEC
Confidence            467888889999999999888889887665432211 1222333444666655543

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=87.24  E-value=7.7  Score=32.65  Aligned_cols=57  Identities=30%  Similarity=0.468  Sum_probs=42.4

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      .+...+.++...+|...+|..|.+++..|+.+|.+++++.+.   . +++.++.+|++.+.
T Consensus       170 ~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~---~-~~~~~~~~g~~~~~  226 (350)
T cd08274         170 LERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGA---A-KEEAVRALGADTVI  226 (350)
T ss_pred             HhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCc---h-hhHHHHhcCCeEEE
Confidence            345567777777777777999999999999999997665532   2 66677788986443

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK06701 short chain dehydrogenase; Provisional

Probab=87.14  E-value=15  Score=30.50  Aligned_cols=54  Identities=22%  Similarity=0.275  Sum_probs=35.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|.-|.++|......|.+++++......  ....+.++..|.++..+.
T Consensus        47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~  102 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIP  102 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEE
Confidence            477888889999999999988889988776554322  122233444455554443

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=87.13  E-value=9.7  Score=30.28  Aligned_cols=54  Identities=13%  Similarity=0.228  Sum_probs=34.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|.-|.++|......|.+++++......  ....+.++..|.++....
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~   59 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASE   59 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEE
Confidence            466889999999999999988889887665433221  122333444566655433

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=86.88  E-value=10  Score=30.10  Aligned_cols=54  Identities=22%  Similarity=0.152  Sum_probs=34.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++.+|+..+|.-|.++|......|.+++++.+.... ....+.++..|+++..+.
T Consensus         6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~   60 (253)
T PRK08217          6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYA   60 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence            467888888999999999888889887665433211 122333444566655443

>PRK06181 short chain dehydrogenase; Provisional

Probab=86.62  E-value=10  Score=30.58  Aligned_cols=53  Identities=21%  Similarity=0.228  Sum_probs=33.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +.+|+..+|.-|.+++......|.+++++...... ....+.++..|.++..+.
T Consensus         3 ~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~   56 (263)
T PRK06181          3 VVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVP   56 (263)
T ss_pred             EEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            56888888999999999888889887776543211 112233344455554443

>PRK15408 autoinducer 2-binding protein lsrB; Provisional

Probab=86.55  E-value=19  Score=30.70  Aligned_cols=42  Identities=17%  Similarity=0.181  Sum_probs=29.2

Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC-CCEEEEE
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP-DIKVVLR  207 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~-~~~vigv  207 (210)
                      ...++++.- +++|.|+++  +...+.|...++++.+. ++.|+|+
T Consensus       199 ~~~~lL~~~-pdi~aI~~~--~~~~~~Ga~~Al~~~g~~~v~VvG~  241 (336)
T PRK15408        199 TAEGILKAY-PDLDAIIAP--DANALPAAAQAAENLKRDKVAIVGF  241 (336)
T ss_pred             HHHHHHHHC-CCCcEEEEC--CCccHHHHHHHHHhCCCCCEEEEEe
Confidence            445666654 679999988  33445588899988653 6777775

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=86.51  E-value=15  Score=29.21  Aligned_cols=33  Identities=24%  Similarity=0.333  Sum_probs=27.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      ++.+|+.++|..|.+++......|.+++++...
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~   38 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRN   38 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            477899999999999999988889987766554

>PRK06138 short chain dehydrogenase; Provisional

Probab=86.44  E-value=13  Score=29.66  Aligned_cols=33  Identities=12%  Similarity=0.224  Sum_probs=26.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      ++.+|+..+|-.|.++|..-...|.+++++...
T Consensus         6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~   38 (252)
T PRK06138          6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRD   38 (252)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCC
Confidence            467889999999999999877788887666543

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=86.40  E-value=12  Score=31.07  Aligned_cols=55  Identities=35%  Similarity=0.417  Sum_probs=40.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHH--HHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMER--RIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~--~~~~~~~Ga~v~~v~~  123 (210)
                      ++.+||..|+.-|.++|..-+..|.+++++.+.......  .+.-+..|.+|...+.
T Consensus         7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~   63 (265)
T COG0300           7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA   63 (265)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEEC
Confidence            478999999999999999999999999999886543222  2222345666665554

>PRK08303 short chain dehydrogenase; Provisional

Probab=86.25  E-value=12  Score=31.36  Aligned_cols=33  Identities=24%  Similarity=0.320  Sum_probs=26.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..++--|.++|..-...|.+++++...
T Consensus         9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            467888888888999998888889987776543

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=86.17  E-value=9.5  Score=30.79  Aligned_cols=32  Identities=16%  Similarity=0.151  Sum_probs=24.9

Q ss_pred             CeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+  +.-|.++|..-...|.++++.-.
T Consensus         8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r   41 (252)
T PRK06079          8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQ   41 (252)
T ss_pred             CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecC
Confidence            466777766  68999999998889998777644

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=86.17  E-value=2.8  Score=36.16  Aligned_cols=86  Identities=21%  Similarity=0.221  Sum_probs=53.4

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHhCCC-eEEc
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA-LRFEEILEKGEEILKKTPD-GYLL  147 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~~~-~~~~  147 (210)
                      +.++..+||..|.-+|+.+..++-.-.|++|.-+.......+...|+++++++-+ .++.=..+..++...+... -+.+
T Consensus        41 ~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~  120 (363)
T PF01041_consen   41 KYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVV  120 (363)
T ss_dssp             SEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE
T ss_pred             CeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEe
Confidence            5688899999999988888444444788899999999999999999999999864 3322112223333333223 3455


Q ss_pred             CCCCCChh
Q 028372          148 RQFENPAN  155 (210)
Q Consensus       148 ~~~~n~~~  155 (210)
                      +.+.++..
T Consensus       121 h~~G~~~d  128 (363)
T PF01041_consen  121 HLFGNPAD  128 (363)
T ss_dssp             -GGGB---
T ss_pred             cCCCCccc
Confidence            66666654

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>cd08293 PTGR2 Prostaglandin reductase

Probab=86.09  E-value=15  Score=30.97  Aligned_cols=58  Identities=28%  Similarity=0.387  Sum_probs=39.4

Q ss_pred             cCCCCCC--CeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHH-cCCEEEEEC
Q 028372           62 KGLITPG--KTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRA-LGAEIILAD  122 (210)
Q Consensus        62 ~g~~~~~--~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~-~Ga~v~~v~  122 (210)
                      .+.++++  .+.+|...+|..|.++...|+.+|. +++++.+   ++.+.+.++. +|++-+...
T Consensus       147 ~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~---s~~~~~~~~~~lGa~~vi~~  208 (345)
T cd08293         147 KGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICG---SDEKCQLLKSELGFDAAINY  208 (345)
T ss_pred             hccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHhcCCcEEEEC
Confidence            4445554  5666777779999999999999998 5655543   3556666655 888654433

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=85.90  E-value=7.6  Score=31.95  Aligned_cols=53  Identities=28%  Similarity=0.340  Sum_probs=38.8

Q ss_pred             CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        65 ~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      ..++.+.+| ...|..|..++..|+.+|.+.++++  +.++.+++..+.+|++.+.
T Consensus       118 ~~~g~~VlV-~G~G~vG~~~~~~ak~~G~~~Vi~~--~~~~~r~~~a~~~Ga~~~i  170 (280)
T TIGR03366       118 DLKGRRVLV-VGAGMLGLTAAAAAAAAGAARVVAA--DPSPDRRELALSFGATALA  170 (280)
T ss_pred             CCCCCEEEE-ECCCHHHHHHHHHHHHcCCCEEEEE--CCCHHHHHHHHHcCCcEec
Confidence            346655444 4668999999999999999855555  3456788888999996544

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK05867 short chain dehydrogenase; Provisional

Probab=85.89  E-value=12  Score=29.93  Aligned_cols=54  Identities=17%  Similarity=0.134  Sum_probs=34.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus        10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   64 (253)
T PRK05867         10 KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVC   64 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEE
Confidence            467888888999999999888889987666432211 122233444566655444

>PRK06841 short chain dehydrogenase; Provisional

Probab=85.87  E-value=15  Score=29.41  Aligned_cols=33  Identities=21%  Similarity=0.289  Sum_probs=26.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      ++.+|+..+|--|.++|......|.+++++.+.
T Consensus        16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~   48 (255)
T PRK06841         16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRS   48 (255)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            477888888999999999988889987766543

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=85.84  E-value=22  Score=30.61  Aligned_cols=51  Identities=27%  Similarity=0.361  Sum_probs=41.9

Q ss_pred             EEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHH-cCCEEEEECC
Q 028372           71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LGAEIILADS  123 (210)
Q Consensus        71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~-~Ga~v~~v~~  123 (210)
                      +++....|.-|...+..++.+|-..++++  +..+.+++..+. .|++++..+.
T Consensus       171 ~V~V~GaGpIGLla~~~a~~~Ga~~Viv~--d~~~~Rl~~A~~~~g~~~~~~~~  222 (350)
T COG1063         171 TVVVVGAGPIGLLAIALAKLLGASVVIVV--DRSPERLELAKEAGGADVVVNPS  222 (350)
T ss_pred             EEEEECCCHHHHHHHHHHHHcCCceEEEe--CCCHHHHHHHHHhCCCeEeecCc
Confidence            68889999999999999999999988888  455778888877 6777766654

>PRK07791 short chain dehydrogenase; Provisional

Probab=85.80  E-value=14  Score=30.54  Aligned_cols=32  Identities=22%  Similarity=0.380  Sum_probs=26.0

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      ++..+|+..++.-|.++|......|.+++++.
T Consensus         6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~   37 (286)
T PRK07791          6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVND   37 (286)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEee
Confidence            34778888888899999998888898877664

>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family

Probab=85.76  E-value=8.6  Score=29.91  Aligned_cols=96  Identities=13%  Similarity=0.091  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHcCCcEEEEEcC-CCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEc--CCCCCChhHH
Q 028372           81 GVGLAFIAAARGYNLIIVMPS-TCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLL--RQFENPANPK  157 (210)
Q Consensus        81 g~alA~~a~~~g~~~~vvvp~-~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~--~~~~n~~~~~  157 (210)
                      |..+.++++.+|.+..--++. +.-..-.+.....|..|.+++..  -+.....++.+.++.|+.-..  ++|.++..  
T Consensus        13 G~~iv~~~r~~g~~~~~Rv~G~dl~~~l~~~~~~~~~~vfllG~~--~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~--   88 (177)
T TIGR00696        13 GIGVVWGLKLLGYPQQSRVAGPDLMEELCQRAGKEKLPIFLYGGK--PDVLQQLKVKLIKEYPKLKIVGAFGPLEPEE--   88 (177)
T ss_pred             cHHHHHHHHHcCCCCCCccChHHHHHHHHHHHHHcCCeEEEECCC--HHHHHHHHHHHHHHCCCCEEEEECCCCChHH--
Confidence            367888999998763211111 11223344455678899999865  244455667777777653322  33333221  


Q ss_pred             HHHHhHHHHHHHhhC-CCCCEEEEccCchh
Q 028372          158 IHYETTGPEIWQDSG-GKVDAFISGIGTGG  186 (210)
Q Consensus       158 ~g~~t~~~Ei~~q~~-~~~d~vv~pvG~Gg  186 (210)
                        .    .+|++++. .++|.|+|+.|+=-
T Consensus        89 --~----~~i~~~I~~s~~dil~VglG~Pk  112 (177)
T TIGR00696        89 --R----KAALAKIARSGAGIVFVGLGCPK  112 (177)
T ss_pred             --H----HHHHHHHHHcCCCEEEEEcCCcH
Confidence              1    23444442 35899999999743

The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.

>PRK07062 short chain dehydrogenase; Provisional

Probab=85.70  E-value=14  Score=29.73  Aligned_cols=33  Identities=12%  Similarity=0.165  Sum_probs=27.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|.-|.++|......|.+++++...
T Consensus         9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~   41 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRD   41 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            477888899999999999988889987766553

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=85.66  E-value=15  Score=31.29  Aligned_cols=58  Identities=17%  Similarity=0.229  Sum_probs=42.0

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-HcCCEEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIILA  121 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~-~~Ga~v~~v  121 (210)
                      +.+.+++|...+|.+.+|..|.++...|+.+|.+++++.   .+..+.+.++ .+|++-+.-
T Consensus       152 ~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~---~~~~k~~~~~~~lGa~~vi~  210 (348)
T PLN03154        152 EVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSA---GSSQKVDLLKNKLGFDEAFN  210 (348)
T ss_pred             HhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEc---CCHHHHHHHHHhcCCCEEEE
Confidence            345567777777777779999999999999999855443   2456777776 689865443

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=85.45  E-value=17  Score=30.80  Aligned_cols=58  Identities=24%  Similarity=0.382  Sum_probs=42.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      +...+.++...++ ...|..|.+++..|+.+|.+.++.+..  .+.+.+.++.+|++.+..
T Consensus       168 ~~~~~~~g~~vlI-~g~g~vG~~~~~~a~~~G~~~v~~~~~--~~~~~~~~~~~g~~~v~~  225 (350)
T cd08256         168 DRANIKFDDVVVL-AGAGPLGLGMIGAARLKNPKKLIVLDL--KDERLALARKFGADVVLN  225 (350)
T ss_pred             HhcCCCCCCEEEE-ECCCHHHHHHHHHHHHcCCcEEEEEcC--CHHHHHHHHHcCCcEEec
Confidence            4556677766555 667999999999999999887666554  356677778889865543

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=85.41  E-value=18  Score=29.17  Aligned_cols=31  Identities=19%  Similarity=0.278  Sum_probs=24.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +.+|+.++|.-|.++|......|.++++...
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r   32 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSR   32 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeC
Confidence            4588889999999999988888988666543

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=85.21  E-value=13  Score=31.67  Aligned_cols=57  Identities=21%  Similarity=0.190  Sum_probs=40.0

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      .+.+.++++++.+|. .+|-.|.+++..|+.+|.+.++.+..  ++.+++.++.+|++-+
T Consensus       169 ~~~~~~~~g~~VlV~-G~g~vG~~a~~~ak~~G~~~Vi~~~~--~~~~~~~~~~~Ga~~~  225 (358)
T TIGR03451       169 VNTGGVKRGDSVAVI-GCGGVGDAAIAGAALAGASKIIAVDI--DDRKLEWAREFGATHT  225 (358)
T ss_pred             HhccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEcC--CHHHHHHHHHcCCceE
Confidence            344556777676666 56889999999999999974444432  4567777788888543

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=85.18  E-value=18  Score=29.03  Aligned_cols=53  Identities=23%  Similarity=0.203  Sum_probs=35.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|--|.++|..-...|.+++++....  ....+.++..+...+.++-
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~--~~~~~~l~~~~~~~~~~Dl   60 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA--ENEAKELREKGVFTIKCDV   60 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc--HHHHHHHHhCCCeEEEecC
Confidence            4678888899999999998888898877654432  2333444444555555554

>PRK07774 short chain dehydrogenase; Provisional

Probab=85.02  E-value=17  Score=28.94  Aligned_cols=32  Identities=19%  Similarity=0.278  Sum_probs=26.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++.+|+.++|--|.+++......|.+++++..
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r   38 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADI   38 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            46788999999999999998888988777644

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=84.96  E-value=12  Score=29.86  Aligned_cols=53  Identities=28%  Similarity=0.325  Sum_probs=34.4

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +.+|+.++|.-|.++|..-...|.++++....+..  ......++..+.+++.+.
T Consensus         4 ~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   58 (248)
T PRK06947          4 VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVA   58 (248)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            56888888999999999888889887665433221  122334455566655544

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=84.94  E-value=15  Score=29.40  Aligned_cols=31  Identities=32%  Similarity=0.232  Sum_probs=25.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      +..+|+..+|.-|.++|..-...|.+++++.
T Consensus        10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~   40 (254)
T PRK08085         10 KNILITGSAQGIGFLLATGLAEYGAEIIIND   40 (254)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCCEEEEEc
Confidence            4778999999999999999888898776654

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=84.85  E-value=14  Score=31.72  Aligned_cols=57  Identities=19%  Similarity=0.351  Sum_probs=40.0

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +...++++...+|. .+|..|.+++..|+.+|.+.++++.  ..+.+++.++.+|++.+.
T Consensus       185 ~~~~i~~g~~VlV~-G~G~vG~~a~~lak~~G~~~Vi~~~--~~~~r~~~a~~~Ga~~~i  241 (371)
T cd08281         185 NTAGVRPGQSVAVV-GLGGVGLSALLGAVAAGASQVVAVD--LNEDKLALARELGATATV  241 (371)
T ss_pred             hccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCcEEEEc--CCHHHHHHHHHcCCceEe
Confidence            44556777666665 4688999999999999995444432  356677788888986443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=84.65  E-value=2.1  Score=32.40  Aligned_cols=39  Identities=21%  Similarity=0.251  Sum_probs=31.6

Q ss_pred             EEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHH
Q 028372           72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA  113 (210)
Q Consensus        72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~  113 (210)
                      |....+||+|.|+|...+..|.+++++.++.   ...+.++.
T Consensus         2 I~ViGaG~~G~AlA~~la~~g~~V~l~~~~~---~~~~~i~~   40 (157)
T PF01210_consen    2 IAVIGAGNWGTALAALLADNGHEVTLWGRDE---EQIEEINE   40 (157)
T ss_dssp             EEEESSSHHHHHHHHHHHHCTEEEEEETSCH---HHHHHHHH
T ss_pred             EEEECcCHHHHHHHHHHHHcCCEEEEEeccH---HHHHHHHH
Confidence            5667999999999999999999999998854   44444543

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=84.65  E-value=13  Score=29.28  Aligned_cols=68  Identities=21%  Similarity=0.173  Sum_probs=43.8

Q ss_pred             hHHHHHHHHHHHHc--CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH-HHcCCEEE
Q 028372           49 DRIAYSMIKDAEDK--GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL-RALGAEII  119 (210)
Q Consensus        49 ~R~a~~~~~~a~~~--g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~-~~~Ga~v~  119 (210)
                      -+|+.+.+..+.+.  +......++++.-..||.|..+|......|.++++ .+.+  ..+.+.+ ..+|++.+
T Consensus         6 g~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv-~D~~--~~~~~~~~~~~g~~~v   76 (200)
T cd01075           6 AYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIV-ADIN--EEAVARAAELFGATVV   76 (200)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEE-EcCC--HHHHHHHHHHcCCEEE
Confidence            36777777777655  22222235677778899999999999999998874 3322  3444443 34476543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR00670 asp_carb_tr aspartate carbamoyltransferase

Probab=84.64  E-value=6  Score=33.52  Aligned_cols=61  Identities=20%  Similarity=0.185  Sum_probs=43.1

Q ss_pred             HcCCCCCCCeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHHHcCCEEEEEC
Q 028372           61 DKGLITPGKTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILAD  122 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~~~Ga~v~~v~  122 (210)
                      ..|.++ |.+..+.+-.  +|.+.++..+++++|++++++.|+..  ++..++.++..|+++...+
T Consensus       144 ~~g~l~-g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~~~~~~~~~~~~~~~G~~v~~~~  208 (301)
T TIGR00670       144 EFGRLD-GLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEELRMPKEILEELKAKGIKVRETE  208 (301)
T ss_pred             HhCCCC-CCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHcCCEEEEEC
Confidence            345543 3233333333  69999999999999999999999864  4555666677788887665

Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=84.52  E-value=6.8  Score=25.69  Aligned_cols=49  Identities=22%  Similarity=0.211  Sum_probs=37.4

Q ss_pred             EEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-----H----HHHHHHHHcCCEEEE
Q 028372           72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-----M----ERRIVLRALGAEIIL  120 (210)
Q Consensus        72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-----~----~~~~~~~~~Ga~v~~  120 (210)
                      ++.-.+|..|.-+|.+.+.+|.+++++.+....     +    .-.+.++..|.+++.
T Consensus         2 vvViGgG~ig~E~A~~l~~~g~~vtli~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~~   59 (80)
T PF00070_consen    2 VVVIGGGFIGIELAEALAELGKEVTLIERSDRLLPGFDPDAAKILEEYLRKRGVEVHT   59 (80)
T ss_dssp             EEEESSSHHHHHHHHHHHHTTSEEEEEESSSSSSTTSSHHHHHHHHHHHHHTTEEEEE
T ss_pred             EEEECcCHHHHHHHHHHHHhCcEEEEEeccchhhhhcCHHHHHHHHHHHHHCCCEEEe
Confidence            567789999999999999999999999876432     1    224456677777764

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=84.51  E-value=20  Score=31.71  Aligned_cols=56  Identities=18%  Similarity=0.254  Sum_probs=35.4

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +++.+|+..+|.-|.++|......|.+++++-.+.......+.....+.+.+.++-
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv  265 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDI  265 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeC
Confidence            34678888888899999988888888877664432222222333445555555553

>PRK05650 short chain dehydrogenase; Provisional

Probab=84.49  E-value=16  Score=29.69  Aligned_cols=31  Identities=19%  Similarity=0.273  Sum_probs=24.6

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +.+|+..+|.-|.+++..-...|.+++++..
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r   32 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADV   32 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            4578888899999999888778888766654

>PRK08265 short chain dehydrogenase; Provisional

Probab=84.46  E-value=20  Score=28.98  Aligned_cols=52  Identities=19%  Similarity=0.164  Sum_probs=33.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|......|.+++++-...  ....+..+..+.++..+.
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~   58 (261)
T PRK08265          7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDA--DNGAAVAASLGERARFIA   58 (261)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHhCCeeEEEE
Confidence            4778888889999999999888899877664322  111222334465555444

>PRK06483 dihydromonapterin reductase; Provisional

Probab=84.19  E-value=19  Score=28.47  Aligned_cols=53  Identities=28%  Similarity=0.292  Sum_probs=37.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|--|.++|..-...|.+++++-....  ...+.++..|+..+.++-
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~D~   55 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHY--PAIDGLRQAGAQCIQADF   55 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHcCCEEEEcCC
Confidence            36788889999999999988888998887654332  223445556776666664

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=84.08  E-value=20  Score=28.80  Aligned_cols=54  Identities=19%  Similarity=0.150  Sum_probs=37.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+.++|.-|.++|......|.+++++.....+  ....+.++..|.++..+.
T Consensus         8 k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~   63 (261)
T PRK08936          8 KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK   63 (261)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence            477888999999999999988999988776554322  222344555677765543

>TIGR02415 23BDH acetoin reductases

Probab=84.00  E-value=19  Score=28.74  Aligned_cols=54  Identities=15%  Similarity=0.177  Sum_probs=35.8

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEECC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILADS  123 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +.+|+..+|.-|.++|......|.+++++...... ....+.++..|.++..+..
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~   56 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKL   56 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEc
Confidence            45788888999999999988899987766543211 1223445556766655543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=83.68  E-value=21  Score=28.73  Aligned_cols=31  Identities=13%  Similarity=0.149  Sum_probs=26.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      +..+|+..+|.-|.++|......|.+++++-
T Consensus         6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~   36 (262)
T TIGR03325         6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLD   36 (262)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence            4778888899999999999888999877663

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=83.61  E-value=13  Score=31.64  Aligned_cols=58  Identities=22%  Similarity=0.321  Sum_probs=46.9

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHH-cCCEEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA-LGAEIIL  120 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~-~Ga~v~~  120 (210)
                      ++-|..++|++.+|++.+|--|.-..-.|+..|.+++-+..   .++|.+.+.. +|-+...
T Consensus       143 l~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaG---g~eK~~~l~~~lGfD~~i  201 (340)
T COG2130         143 LDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAG---GAEKCDFLTEELGFDAGI  201 (340)
T ss_pred             HHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecC---CHHHHHHHHHhcCCceee
Confidence            45677788889999999999999988999999999888765   5778888777 6665544

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=83.56  E-value=16  Score=30.16  Aligned_cols=54  Identities=33%  Similarity=0.410  Sum_probs=37.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE  117 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~  117 (210)
                      +...++++...+|...+|..|.+++..|+.+|.+++++.+..   .+.+.++.+|++
T Consensus       133 ~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~---~~~~~~~~~g~~  186 (324)
T cd08292         133 DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRD---AGVAELRALGIG  186 (324)
T ss_pred             HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCH---HHHHHHHhcCCC
Confidence            345567776766666779999999999999999887775532   334444445653

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=83.49  E-value=19  Score=30.41  Aligned_cols=74  Identities=24%  Similarity=0.259  Sum_probs=53.9

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE-cCCCCHHHHHHHHHcC-CEEEEECCCCCHHHHHHHHHHHHHhCC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-PSTCSMERRIVLRALG-AEIILADSALRFEEILEKGEEILKKTP  142 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv-p~~~~~~~~~~~~~~G-a~v~~v~~~~~~~~~~~~a~~~~~~~~  142 (210)
                      |+..+||.+++-.|+++|.--+++|-+.++.- .+....+..+.++..| ++-..++-+ +.++....++++.++.+
T Consensus        38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis-~~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDIS-DREEIYRLAKKVKKEVG  113 (300)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCC-CHHHHHHHHHHHHHhcC
Confidence            45788999999999999999999998544432 2244566677777767 444566654 47888888999988863

>PF09837 DUF2064: Uncharacterized protein conserved in bacteria (DUF2064); InterPro: IPR018641 This entry contains proteins that have no known function

Probab=83.05  E-value=15  Score=26.60  Aligned_cols=98  Identities=12%  Similarity=0.090  Sum_probs=51.6

Q ss_pred             HHHHHHHcCCcEEEEEcCCCCHHHHHH-HHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           84 LAFIAAARGYNLIIVMPSTCSMERRIV-LRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        84 lA~~a~~~g~~~~vvvp~~~~~~~~~~-~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+...+..+.++.++..+.......+. ....+..++.=.+ .++.+++..|-+.+.+.-....+-..+-|.....    
T Consensus         2 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Q~g-~dLG~Rm~~a~~~~~~g~~~vvliGsD~P~l~~~----   76 (122)
T PF09837_consen    2 LAALAQADGADVVLAYTPDGDHAAFRQLWLPSGFSFFPQQG-GDLGERMANAFQQAARGYEPVVLIGSDCPDLTPD----   76 (122)
T ss_dssp             ------TSSSEEEEEE----TTHHHHHHHH-TTSEEEE--S-SSHHHHHHHHHHHHHTT-SEEEEE-SS-TT--HH----
T ss_pred             ccccccCCCcCEEEEEcCCccHHHHhccccCCCCEEeecCC-CCHHHHHHHHHHHHHcCCCcEEEEcCCCCCCCHH----
Confidence            345567778888888876554444433 4455666665544 5688988888666644335667777788876432    


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhH
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGT  187 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~  187 (210)
                      .-.+.++.+ ...|.|+.|+--||-
T Consensus        77 ~l~~A~~~L-~~~d~VlgPa~DGGy  100 (122)
T PF09837_consen   77 DLEQAFEAL-QRHDVVLGPAEDGGY  100 (122)
T ss_dssp             HHHHHHHHT-TT-SEEEEEBTTSSE
T ss_pred             HHHHHHHHh-ccCCEEEeeccCCCE
Confidence            223444555 345999999987763

; PDB: 3CGX_A.

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=82.87  E-value=7.8  Score=32.80  Aligned_cols=56  Identities=21%  Similarity=0.159  Sum_probs=40.1

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      ++..+++|.+.+|.. .|..|.+++..|+.+|.+++++.+   .+.|++.++.+|++.+.
T Consensus       159 ~~~~~~~g~~VlV~G-~g~iG~~a~~~a~~~G~~vi~~~~---~~~~~~~a~~~Ga~~vi  214 (329)
T TIGR02822       159 LRASLPPGGRLGLYG-FGGSAHLTAQVALAQGATVHVMTR---GAAARRLALALGAASAG  214 (329)
T ss_pred             HhcCCCCCCEEEEEc-CCHHHHHHHHHHHHCCCeEEEEeC---ChHHHHHHHHhCCceec
Confidence            345677776656555 588898888899999987554433   35678889999996543

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PRK05872 short chain dehydrogenase; Provisional

Probab=82.61  E-value=19  Score=29.85  Aligned_cols=32  Identities=28%  Similarity=0.276  Sum_probs=25.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|......|.+++++-.
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r   41 (296)
T PRK05872         10 KVVVVTGAARGIGAELARRLHARGAKLALVDL   41 (296)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            47788889999999999998888987666543

>PRK05693 short chain dehydrogenase; Provisional

Probab=82.54  E-value=25  Score=28.59  Aligned_cols=50  Identities=28%  Similarity=0.240  Sum_probs=33.8

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      ..+|+..+|-.|.++|......|.+++++...   ..+.+.+...+.+.+.++
T Consensus         3 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~D   52 (274)
T PRK05693          3 VVLITGCSSGIGRALADAFKAAGYEVWATARK---AEDVEALAAAGFTAVQLD   52 (274)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHCCCeEEEee
Confidence            56888888999999999888889887776543   233334444455544444

>COG1751 Uncharacterized conserved protein [Function unknown]

Probab=82.50  E-value=15  Score=28.09  Aligned_cols=75  Identities=17%  Similarity=0.285  Sum_probs=53.7

Q ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC---------CCCHHHHHHHHH
Q 028372           43 PCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS---------TCSMERRIVLRA  113 (210)
Q Consensus        43 ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~---------~~~~~~~~~~~~  113 (210)
                      |.--+-++.....+.+|.+-|.    +..||.+|+|.++.-++-+...- +++++|.-.         ..+++-.+.++.
T Consensus         7 pG~eNT~~tle~a~erA~elgi----k~~vVAS~tG~tA~k~lemveg~-lkvVvVthh~Gf~e~g~~e~~~E~~~~L~e   81 (186)
T COG1751           7 PGKENTDETLEIAVERAKELGI----KHIVVASSTGYTALKALEMVEGD-LKVVVVTHHAGFEEKGTQEMDEEVRKELKE   81 (186)
T ss_pred             CcccchHHHHHHHHHHHHhcCc----ceEEEEecccHHHHHHHHhcccC-ceEEEEEeecccccCCceecCHHHHHHHHH
Confidence            3335678888888999988875    35566667788877666554433 888887642         346778889999


Q ss_pred             cCCEEEEEC
Q 028372          114 LGAEIILAD  122 (210)
Q Consensus       114 ~Ga~v~~v~  122 (210)
                      .|++|..-.
T Consensus        82 rGa~v~~~s   90 (186)
T COG1751          82 RGAKVLTQS   90 (186)
T ss_pred             cCceeeeeh
Confidence            999997654

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=82.48  E-value=30  Score=29.57  Aligned_cols=57  Identities=19%  Similarity=0.248  Sum_probs=40.9

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +.+.++++.+.+|. .+|..|.+++..++.+|.+.++++..  .+.+++.++.+|++-+.
T Consensus       178 ~~~~~~~g~~vlV~-G~g~vG~~~~~~a~~~G~~~Vi~~~~--~~~~~~~~~~~ga~~~i  234 (365)
T cd08277         178 NTAKVEPGSTVAVF-GLGAVGLSAIMGAKIAGASRIIGVDI--NEDKFEKAKEFGATDFI  234 (365)
T ss_pred             hhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCeEEEEeC--CHHHHHHHHHcCCCcEe
Confidence            44567777666666 57999999999999999953443332  56778888889985443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK06720 hypothetical protein; Provisional

Probab=82.40  E-value=20  Score=27.44  Aligned_cols=53  Identities=19%  Similarity=0.210  Sum_probs=32.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCH-HHHHHHHHcCCEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM-ERRIVLRALGAEIILA  121 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~-~~~~~~~~~Ga~v~~v  121 (210)
                      +..+|+..++--|.++|......|.++.++-...... ...+.++..|.++..+
T Consensus        17 k~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~   70 (169)
T PRK06720         17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFV   70 (169)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence            4667888888889999988888888766654332111 1123344456555433

>PRK06197 short chain dehydrogenase; Provisional

Probab=82.36  E-value=19  Score=29.93  Aligned_cols=33  Identities=15%  Similarity=0.287  Sum_probs=26.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+.++|--|.++|..-...|.+++++.+.
T Consensus        17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~   49 (306)
T PRK06197         17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRN   49 (306)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence            467888888888888888877789887776553

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=82.35  E-value=26  Score=29.65  Aligned_cols=58  Identities=33%  Similarity=0.398  Sum_probs=39.7

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      +...++++...+|.+ +|..|.+++..|+.+|.+.++++.  .++.+.+.++.+|++.+..
T Consensus       166 ~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~--~~~~~~~~~~~~ga~~~i~  223 (351)
T cd08233         166 RRSGFKPGDTALVLG-AGPIGLLTILALKAAGASKIIVSE--PSEARRELAEELGATIVLD  223 (351)
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHhCCCEEEC
Confidence            444566776656654 688999999999999995444443  3555666777788865543

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=82.31  E-value=16  Score=30.94  Aligned_cols=53  Identities=19%  Similarity=0.241  Sum_probs=38.1

Q ss_pred             CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        65 ~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      ..++++.+|. .+|..|.+....++.+|.+.++++.  .++.+++.++.+|++.+.
T Consensus       167 ~~~g~~VlV~-G~G~vG~~aiqlak~~G~~~Vi~~~--~~~~~~~~a~~lGa~~vi  219 (343)
T PRK09880        167 DLQGKRVFVS-GVGPIGCLIVAAVKTLGAAEIVCAD--VSPRSLSLAREMGADKLV  219 (343)
T ss_pred             CCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEEEe--CCHHHHHHHHHcCCcEEe
Confidence            3456565555 5699999999999999986554443  246788888899997654

>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]

Probab=82.28  E-value=24  Score=28.31  Aligned_cols=122  Identities=12%  Similarity=0.037  Sum_probs=74.9

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHH
Q 028372           52 AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEIL  131 (210)
Q Consensus        52 a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~  131 (210)
                      +..+.....+-|.    ...=|+.++--...++...++.+. ++.+=.-.=.++...+.....||+.++.++-.  .+  
T Consensus        27 a~~~a~Ali~gGi----~~IEITl~sp~a~e~I~~l~~~~p-~~lIGAGTVL~~~q~~~a~~aGa~fiVsP~~~--~e--   97 (211)
T COG0800          27 ALPLAKALIEGGI----PAIEITLRTPAALEAIRALAKEFP-EALIGAGTVLNPEQARQAIAAGAQFIVSPGLN--PE--   97 (211)
T ss_pred             HHHHHHHHHHcCC----CeEEEecCCCCHHHHHHHHHHhCc-ccEEccccccCHHHHHHHHHcCCCEEECCCCC--HH--
Confidence            4444555556664    233466777778888899999988 55444344457888999999999999999742  33  


Q ss_pred             HHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhh--------------C-CCCCEEEEccCchh
Q 028372          132 EKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDS--------------G-GKVDAFISGIGTGG  186 (210)
Q Consensus       132 ~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~--------------~-~~~d~vv~pvG~Gg  186 (210)
                        .-+.+.++ +..+++...+|.- ..-.-..|.+++.-+              . +-++.-|+|+|+=+
T Consensus        98 --v~~~a~~~-~ip~~PG~~TptE-i~~Ale~G~~~lK~FPa~~~Gg~~~~ka~~gP~~~v~~~pTGGVs  163 (211)
T COG0800          98 --VAKAANRY-GIPYIPGVATPTE-IMAALELGASALKFFPAEVVGGPAMLKALAGPFPQVRFCPTGGVS  163 (211)
T ss_pred             --HHHHHHhC-CCcccCCCCCHHH-HHHHHHcChhheeecCccccCcHHHHHHHcCCCCCCeEeecCCCC
Confidence              33344444 6677777666653 222223334443322              1 23677888887644

>PRK05826 pyruvate kinase; Provisional

Probab=82.25  E-value=30  Score=31.25  Aligned_cols=120  Identities=12%  Similarity=0.114  Sum_probs=69.9

Q ss_pred             HHHHHHHcCCcEEEE-----------EcCCCCHHHHHHHHHcCCEEEEECCCC---CH-HHHHHHHHHHHHhCCCeEEc-
Q 028372           84 LAFIAAARGYNLIIV-----------MPSTCSMERRIVLRALGAEIILADSAL---RF-EEILEKGEEILKKTPDGYLL-  147 (210)
Q Consensus        84 lA~~a~~~g~~~~vv-----------vp~~~~~~~~~~~~~~Ga~v~~v~~~~---~~-~~~~~~a~~~~~~~~~~~~~-  147 (210)
                      +...|+..|.++.+-           .|..+....+...-..|++-+...++.   .| .++.+...+.+++.+..++. 
T Consensus       264 Ii~~c~~~gKpvi~ATqmLeSM~~~p~PTRAEvsDVanav~dG~D~vmLS~ETA~G~yPveaV~~m~~I~~~aE~~~~~~  343 (465)
T PRK05826        264 IIRKAREAGKPVITATQMLESMIENPRPTRAEVSDVANAVLDGTDAVMLSGETAAGKYPVEAVEAMARICKGAEKEFSIN  343 (465)
T ss_pred             HHHHHHHcCCCEEEECHHHHHHhhCCCCchhhhhhHHHHHHcCCcEEEeccccccCcCHHHHHHHHHHHHHHHHhccchh
Confidence            445688899998874           334444455555566799877766531   12 34555555544433221111 


Q ss_pred             ---CCCCCC-hhHHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          148 ---RQFENP-ANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       148 ---~~~~n~-~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                         ...... ..........+.++.++++ +.+.||+..-+|.++-.+    ....|.+.|++++
T Consensus       344 ~~~~~~~~~~~~~~~~ia~aa~~~a~~l~-~a~~Ivv~T~sG~ta~~i----sk~RP~~pI~~~t  403 (465)
T PRK05826        344 LSKHRLDRQFDRIDEAIAMSAMYAANHLK-GVKAIVALTESGRTARLI----SRFRPGAPIFAVT  403 (465)
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHhcC-CCCEEEEECCCcHHHHHH----HhhCCCCCEEEEc
Confidence               100011 1112344555667777773 267899999999985544    4568999999886

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=82.17  E-value=23  Score=28.32  Aligned_cols=31  Identities=13%  Similarity=0.093  Sum_probs=25.6

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +.+|+..+|..|.++|......|.+++++..
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r   32 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGR   32 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEEC
Confidence            4578888999999999998888998776644

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=81.88  E-value=17  Score=30.19  Aligned_cols=49  Identities=22%  Similarity=0.300  Sum_probs=34.7

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      +++.+|...+|..|.+++..|+.+|.++++..+.   ..+.+.++.+|++-+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~---~~~~~~~~~~g~~~v  195 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGK---ADAADYLKKLGAKEV  195 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecC---HHHHHHHHHcCCCEE
Confidence            4455666667999999999999999986655432   345666677777433

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=81.58  E-value=23  Score=29.69  Aligned_cols=53  Identities=25%  Similarity=0.270  Sum_probs=38.2

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      .++++...+|...++..|.+++..|+.+|.+++++.+.   +.+.+.++.+|++-+
T Consensus       162 ~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~---~~~~~~~~~~g~~~v  214 (341)
T cd08297         162 GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVG---DEKLELAKELGADAF  214 (341)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHHcCCcEE
Confidence            45666676777777789999999999999987666443   345556666776543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK07326 short chain dehydrogenase; Provisional

Probab=81.40  E-value=24  Score=27.72  Aligned_cols=32  Identities=31%  Similarity=0.365  Sum_probs=26.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|..|.+++......|.+++++..
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r   38 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGYKVAITAR   38 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeC
Confidence            46788889999999999998888998777654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=81.31  E-value=27  Score=28.25  Aligned_cols=32  Identities=19%  Similarity=0.200  Sum_probs=24.1

Q ss_pred             CeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+.++  +.-|.++|..-...|.++++.-.
T Consensus         8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r   41 (257)
T PRK08594          8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA   41 (257)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC
Confidence            366777755  78899999988888998776543

>PRK07109 short chain dehydrogenase; Provisional

Probab=81.27  E-value=11  Score=32.19  Aligned_cols=72  Identities=17%  Similarity=0.184  Sum_probs=46.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHh
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSAL-RFEEILEKGEEILKK  140 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~  140 (210)
                      +..+|+..+|.-|.++|......|.+++++..... .....+.++..|++++.+..+- +.++..+.+.+..++
T Consensus         9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          9 QVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46788888899999999998889998877765422 1223445667788877655431 233333344444433

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=81.20  E-value=32  Score=29.55  Aligned_cols=85  Identities=19%  Similarity=0.286  Sum_probs=53.6

Q ss_pred             eEEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCH-HHHHHHHHHHHHhCCCeEEc
Q 028372           70 TTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF-EEILEKGEEILKKTPDGYLL  147 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~-~~~~~~a~~~~~~~~~~~~~  147 (210)
                      .+++.+++|..|.-.|+.=-.. |=++.++.-..-.+.-.+..+.+|++|..++.+.+- -........+++..++.+|+
T Consensus        69 ~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv  148 (385)
T KOG2862|consen   69 QTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFV  148 (385)
T ss_pred             ceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEE
Confidence            5677778887776654443333 444444444444666777888999999988754221 12234566777777888888


Q ss_pred             CCCCCCh
Q 028372          148 RQFENPA  154 (210)
Q Consensus       148 ~~~~n~~  154 (210)
                      -+.+...
T Consensus       149 ~hgdsST  155 (385)
T KOG2862|consen  149 THGDSST  155 (385)
T ss_pred             EecCccc
Confidence            7766544

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=81.12  E-value=16  Score=29.19  Aligned_cols=55  Identities=16%  Similarity=0.108  Sum_probs=40.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ++.+|+..+|..|.+++......|.+++++..... .....+.++..|.++..+..
T Consensus         8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   63 (262)
T PRK13394          8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAM   63 (262)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEEC
Confidence            47789999999999999999999998877655432 12334455667888766554

>PRK05717 oxidoreductase; Validated

Probab=81.07  E-value=27  Score=28.00  Aligned_cols=31  Identities=23%  Similarity=0.541  Sum_probs=25.8

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIV   98 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vv   98 (210)
                      +++.+|+..+|.-|.++|..-...|.+++++
T Consensus        10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~   40 (255)
T PRK05717         10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLA   40 (255)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCEEEEE
Confidence            3477889999999999999988888877665

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=81.05  E-value=23  Score=29.71  Aligned_cols=53  Identities=21%  Similarity=0.272  Sum_probs=38.2

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      .++++...+|.. +|..|.+++..|+.+|.+++++.+   ...+++.++.+|++-+.
T Consensus       160 ~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~---~~~~~~~~~~~g~~~~i  212 (333)
T cd08296         160 GAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISR---GSDKADLARKLGAHHYI  212 (333)
T ss_pred             CCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeC---ChHHHHHHHHcCCcEEe
Confidence            456665656655 899999999999999998655543   34566677888885443

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=80.86  E-value=25  Score=27.57  Aligned_cols=34  Identities=18%  Similarity=0.300  Sum_probs=27.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      ++.+|+..+|..|.+++......|.+++++....
T Consensus         7 ~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~   40 (249)
T PRK12825          7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSD   40 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            3678888999999999999888899876665554

>PRK10537 voltage-gated potassium channel; Provisional

Probab=80.78  E-value=39  Score=29.77  Aligned_cols=32  Identities=13%  Similarity=0.207  Sum_probs=26.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      .+++....|+.|..++-.-+..|.+++++.++
T Consensus       241 ~HvII~G~g~lg~~v~~~L~~~g~~vvVId~d  272 (393)
T PRK10537        241 DHFIICGHSPLAINTYLGLRQRGQAVTVIVPL  272 (393)
T ss_pred             CeEEEECCChHHHHHHHHHHHCCCCEEEEECc
Confidence            56888999999999888877789999888764

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=80.76  E-value=31  Score=28.54  Aligned_cols=56  Identities=27%  Similarity=0.348  Sum_probs=41.3

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        63 g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      +.++++...+|...+|..|.+++..|+.+|.+.+++.+   ++.+.+.++.+|++.+..
T Consensus       136 ~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~~  191 (334)
T PTZ00354        136 GDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTS---SEEKVDFCKKLAAIILIR  191 (334)
T ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEEe
Confidence            55667767777777899999999999999998765433   355666667788854443

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=80.74  E-value=31  Score=28.62  Aligned_cols=55  Identities=24%  Similarity=0.200  Sum_probs=39.6

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI  118 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v  118 (210)
                      +.+.+.++...+|....|..|.+++..|+.+|.+++.+.+   ...+...++.+|++-
T Consensus       134 ~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~---~~~~~~~~~~~g~~~  188 (327)
T PRK10754        134 KTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---SAQKAQRAKKAGAWQ  188 (327)
T ss_pred             hhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHCCCCE
Confidence            3456677767666667899999999999999999766543   344555566677643

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=80.27  E-value=27  Score=28.08  Aligned_cols=32  Identities=19%  Similarity=0.170  Sum_probs=26.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|......|.+++++..
T Consensus         7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r   38 (263)
T PRK06200          7 QVALITGGGSGIGRALVERFLAEGARVAVLER   38 (263)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            47788888899999999998889998776643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	210
2isq_A	320	Crystal Structure Of O-Acetylserine Sulfhydrylase F		2e-70
1z7w_A	322	Crystal Structure Of O-Acetylserine Sulfhydrylase F		2e-70
1z7y_A	322	Crystal Structure Of The Arabidopsis Thaliana O-Ace		9e-70
4aec_A	430	Crystal Structure Of The Arabidopsis Thaliana O-Ace		3e-68
3vbe_A	344	Crystal Structure Of Beta-Cyanoalanine Synthase In		1e-58
3vc3_A	344	Crystal Structure Of Beta-Cyanoalanine Synthase K95		5e-58
2q3d_A	313	2.2 A Resolution Crystal Structure Of O-acetylserin		1e-42
3rr2_A	314	Structure Of A Cysteine Synthase (O-Acetylserine Su		4e-42
2q3b_A	313	1.8 A Resolution Crystal Structure Of O-Acetylserin		5e-42
4i1y_A	314	The Structure Of Cysteine Synthase From Mycobacteri		1e-41
1oas_A	322	O-Acetylserine Sulfhydrylase From Salmonella Typhim		2e-41
1d6s_A	322	Crystal Structure Of The K41a Mutant Of O-Acetylser		7e-41
1ve1_A	304	Crystal Structure Of T.Th. Hb8 O-Acetylserine Sulfh		8e-41
2egu_A	308	Crystal Structure Of O-Acetylserine Sulfhydrase Fro		2e-39
2bhs_A	303	Crystal Structure Of Cysteine Synthase B Length = 3		3e-37
2bht_A	303	Crystal Structure Of O-Acetylserine Sulfhydrylase B		8e-37
4air_A	354	Leishmania Major Cysteine Synthase Length = 354		1e-36
2v03_A	303	High Resolution Structure And Catalysis Of An O- Ac		1e-36
2jc3_A	303	Structure Of O-acetylserine Sulfhydrylase B From Sa		1e-36
3t4p_A	334	Crystal Structure Of O-Acetyl Serine Sulfhydrylase		6e-36
1m54_A	363	Cystathionine-Beta Synthase: Reduced Vicinal Thiols		4e-33
1jbq_A	435	Structure Of Human Cystathionine Beta-Synthase: A U		7e-33
1y7l_A	316	O-Acetylserine Sulfhydrylase Complex Length = 316		3e-32
3pc2_A	527	Full Length Structure Of Cystathionine Beta-Synthas		1e-31
3fca_A	291	Genetic Incorporation Of A Metal-Ion Chelating Amin		5e-29
1o58_A	303	Crystal Structure Of O-Acetylserine Sulfhydrylase (		7e-29
3dwg_A	325	Crystal Structure Of A Sulfur Carrier Protein Compl		7e-29
3dwi_A	323	Crystal Structure Of Mycobacterium Tuberculosis Cys		3e-28
3dki_A	326	2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobac		3e-28
3bm5_A	338	Crystal Structure Of O-Acetyl-Serine Sulfhydrylase		3e-26
2pqm_A	343	Crystal Structure Of Cysteine Synthase (Oass) From		3e-26
1wkv_A	389	Crystal Structure Of O-Phosphoserine Sulfhydrylase		7e-05
1tdj_A	514	Threonine Deaminase (Biosynthetic) From E. Coli Len		9e-05
1ve5_A	311	Crystal Structure Of T.Th. Hb8 Threonine Deaminase		2e-04
4d9k_A	398	Crystal Structure Of Escherichia Coli Diaminopropio		3e-04
4d9m_A	398	Crystal Structure Of Diaminopropionate Ammonia Lyas		3e-04
4d9i_A	398	Crystal Structure Of Holo Diaminopropionate Ammonia		3e-04
3vsc_A	389	Crystal Structure Of The K127a Mutant Of O-Phosphos		3e-04

>pdb|2ISQ|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From Arabidopsis Thaliana In Complex With C-Terminal Peptide From Arabidopsis Serine Acetyltransferase Length = 320

Iteration: 1
 Score =  261 bits (667), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 121/198 (61%), Positives = 146/198 (73%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I +DVTELIGNTP+VYLNNV +GCV R+AAKLE MEPCSSVKDRI +SMI DAE KGLI 
Sbjct: 3   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 62
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG++ LIE TSGNTGVGLAF AAA+GY LII MP++ S ERRI+L A G E++L D A  
Sbjct: 63  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 122
Query: 127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                         TP+GY+L+QFENPANPKIHYETTGPEIW+ +GGK+D F+S      
Sbjct: 123 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 182
Query: 187 XXXXXXRFLKENNPDIKV 204
                 ++LKE N ++K+
Sbjct: 183 TITGAGKYLKEQNANVKL 200

>pdb|1Z7W|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase From Arabidopsis Thaliana Length = 322

Iteration: 1
 Score =  261 bits (667), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 121/198 (61%), Positives = 146/198 (73%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I +DVTELIGNTP+VYLNNV +GCV R+AAKLE MEPCSSVKDRI +SMI DAE KGLI 
Sbjct: 5   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 64
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG++ LIE TSGNTGVGLAF AAA+GY LII MP++ S ERRI+L A G E++L D A  
Sbjct: 65  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 124
Query: 127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                         TP+GY+L+QFENPANPKIHYETTGPEIW+ +GGK+D F+S      
Sbjct: 125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 184
Query: 187 XXXXXXRFLKENNPDIKV 204
                 ++LKE N ++K+
Sbjct: 185 TITGAGKYLKEQNANVKL 202

>pdb|1Z7Y|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetylserine Sulfhydrylase K46a Mutant Length = 322

Iteration: 1
 Score =  259 bits (661), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 120/198 (60%), Positives = 145/198 (73%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I +DVTELIGNTP+VYLNNV +GCV R+AAKLE MEPCSSV DRI +SMI DAE KGLI 
Sbjct: 5   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVADRIGFSMISDAEKKGLIK 64
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG++ LIE TSGNTGVGLAF AAA+GY LII MP++ S ERRI+L A G E++L D A  
Sbjct: 65  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 124
Query: 127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                         TP+GY+L+QFENPANPKIHYETTGPEIW+ +GGK+D F+S      
Sbjct: 125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 184
Query: 187 XXXXXXRFLKENNPDIKV 204
                 ++LKE N ++K+
Sbjct: 185 TITGAGKYLKEQNANVKL 202

>pdb|4AEC|A Chain A, Crystal Structure Of The Arabidopsis Thaliana O-Acetyl- Serine-(Thiol)-Lyase C Length = 430

Iteration: 1
 Score =  254 bits (649), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 117/203 (57%), Positives = 145/203 (71%)
Query: 3   DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDK 62
           D   I  +V++LIG TPMVYLN++  GCVA IAAKLE MEPC SVKDRI YSM+ DAE K
Sbjct: 109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQK 168
Query: 63  GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
           G I+PGK+ L+E TSGNTG+GLAFIAA+RGY LI+ MP++ SMERR++L+A GAE++L D
Sbjct: 169 GFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD 228
Query: 123 SALRFXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXX 182
            A                TPD Y+L+QF+NPANPKIHYETTGPEIW D+ GKVD F++  
Sbjct: 229 PAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGI 288
Query: 183 XXXXXXXXXXRFLKENNPDIKVV 205
                     RF+KE NP  +V+
Sbjct: 289 GTGGTITGVGRFIKEKNPKTQVI 311

>pdb|3VBE|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase In Soybean Length = 344

Iteration: 1
 Score =  222 bits (566), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 99/198 (50%), Positives = 137/198 (69%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           IK+ V++LIG TP+VYLN V +GC A +A K E M+P +S+KDR AY+MI DAE+K LIT
Sbjct: 25  IKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIKDRPAYAMITDAEEKNLIT 84
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGKTTLIE TSGN G+ +AF+AA +GY +++ MPS  S+ERR+ +RA GAE+IL D A  
Sbjct: 85  PGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKG 144
Query: 127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                         TP+ ++L+QF NPAN ++H+ETTGPEIW+D+ G+VD F+       
Sbjct: 145 MGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGG 204
Query: 187 XXXXXXRFLKENNPDIKV 204
                 ++LK  NP++K+
Sbjct: 205 TVSGVGQYLKSKNPNVKI 222

>pdb|3VC3|A Chain A, Crystal Structure Of Beta-Cyanoalanine Synthase K95a Mutant In Soybean Length = 344

Iteration: 1
 Score =  220 bits (560), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 98/198 (49%), Positives = 136/198 (68%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           IK+ V++LIG TP+VYLN V +GC A +A K E M+P +S+ DR AY+MI DAE+K LIT
Sbjct: 25  IKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLIT 84
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGKTTLIE TSGN G+ +AF+AA +GY +++ MPS  S+ERR+ +RA GAE+IL D A  
Sbjct: 85  PGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKG 144
Query: 127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                         TP+ ++L+QF NPAN ++H+ETTGPEIW+D+ G+VD F+       
Sbjct: 145 MGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGG 204
Query: 187 XXXXXXRFLKENNPDIKV 204
                 ++LK  NP++K+
Sbjct: 205 TVSGVGQYLKSKNPNVKI 222

>pdb|2Q3D|A Chain A, 2.2 A Resolution Crystal Structure Of O-acetylserine Sulfhydrylase (oass) From Mycobacterium Tuberculosis In Complex With The Reaction Intermediate Alpha-aminoacrylate Length = 313

Iteration: 1
 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 88/200 (44%), Positives = 117/200 (58%), Gaps = 1/200 (0%)
Query: 6   AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           +I  D+T+LIG TP+V L  V DG VA I AKLE   P +SVKDRI  +M++ AE  GLI
Sbjct: 5   SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLI 64
Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
            P  T ++E TSGNTG+ LA + AARGY  ++ MP T S+ERR++LRA GAE+IL   A 
Sbjct: 65  KP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGAD 123
Query: 126 RFXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXX 185
                              ++ +QFENPANP IH  TT  E+W+D+ GKVD  ++     
Sbjct: 124 GMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTG 183
Query: 186 XXXXXXXRFLKENNPDIKVV 205
                  + +KE  P  + V
Sbjct: 184 GTITGVAQVIKERKPSARFV 203

>pdb|3RR2|A Chain A, Structure Of A Cysteine Synthase (O-Acetylserine Sulfhydrylase (Oass)) From Mycobacterium Marinum Atcc Baa-535 M Length = 314

Iteration: 1
 Score =  167 bits (423), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 87/200 (43%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I  ++T+LIG TP+V L  V DG  A + AKLE+  P  S+KDRI  +MI  AE  GLI 
Sbjct: 7   IAENITQLIGGTPLVRLRRVTDGAAADVVAKLESFNPAGSIKDRIGVAMIDAAEKAGLIK 66
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           P  T ++E TSGNTG+ LA ++AARGY  ++ MP T S+ERR++LRA GAE++L   A  
Sbjct: 67  P-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRMLLRAYGAELVLTPGA-E 124
Query: 127 FXXXXXXXXXXXXXTPDGYLL-RQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXX 185
                         T D Y + +QFENPANP +H  TT  E+W+D+ GKVD F+S     
Sbjct: 125 GMAGAIAKAEELAKTDDRYFIPQQFENPANPAVHAVTTAEEVWRDTDGKVDIFVSGVGTG 184
Query: 186 XXXXXXXRFLKENNPDIKVV 205
                  + +K+  P  + V
Sbjct: 185 GTITGVAQVIKQRRPSAQFV 204

>pdb|2Q3B|A Chain A, 1.8 A Resolution Crystal Structure Of O-Acetylserine Sulfhydrylase (Oass) Holoenzyme From Mycobacterium Tuberculosis Length = 313

Iteration: 1
 Score =  167 bits (422), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 87/200 (43%), Positives = 116/200 (58%), Gaps = 1/200 (0%)
Query: 6   AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           +I  D+T+LIG TP+V L  V DG VA I AKLE   P +SV DRI  +M++ AE  GLI
Sbjct: 5   SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVXDRIGVAMLQAAEQAGLI 64
Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
            P  T ++E TSGNTG+ LA + AARGY  ++ MP T S+ERR++LRA GAE+IL   A 
Sbjct: 65  KP-DTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGAD 123
Query: 126 RFXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXX 185
                              ++ +QFENPANP IH  TT  E+W+D+ GKVD  ++     
Sbjct: 124 GMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTG 183
Query: 186 XXXXXXXRFLKENNPDIKVV 205
                  + +KE  P  + V
Sbjct: 184 GTITGVAQVIKERKPSARFV 203

>pdb|4I1Y|A Chain A, The Structure Of Cysteine Synthase From Mycobacterium Ulcerans Agy99 Length = 314

Iteration: 1
 Score =  166 bits (419), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 86/200 (43%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I  ++ +LIG TP+V L  V DG  A + AKLE+  P  S+KDRI  +MI  AE  GLI 
Sbjct: 7   IAENIAQLIGGTPLVRLRRVTDGAAADVVAKLESFNPAGSIKDRIGVAMIDAAEKAGLIK 66
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           P  T ++E TSGNTG+ LA ++AARGY  ++ MP T S+ERR++LRA GAE++L   A  
Sbjct: 67  P-DTIILEPTSGNTGIALAMVSAARGYKCVLTMPDTMSIERRMLLRAYGAELVLTPGA-E 124
Query: 127 FXXXXXXXXXXXXXTPDGYLL-RQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXX 185
                         T D Y + +QFENPANP +H  TT  E+W+D+ GKVD F+S     
Sbjct: 125 GMAGAIAKAEELAKTDDRYFIPQQFENPANPAVHAVTTAEEVWRDTDGKVDIFVSGVGTG 184
Query: 186 XXXXXXXRFLKENNPDIKVV 205
                  + +K+  P  + V
Sbjct: 185 GTITGVAQVIKQRRPSAQFV 204

>pdb|1OAS|A Chain A, O-Acetylserine Sulfhydrylase From Salmonella Typhimurium Length = 322

Iteration: 1
 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/191 (46%), Positives = 119/191 (62%), Gaps = 5/191 (2%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I  D +  IG+TP+V LN + +G   RI AK+E+  P  SVK RI  +MI DAE +G++ 
Sbjct: 3   IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK 59
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG   L+E T+GNTG+ LA++AAARGY L + MP T S+ERR +L+ALGA ++L + A  
Sbjct: 60  PG-VELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKG 118
Query: 127 FXXXXXXXXXXXXXTPDGY-LLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXX 185
                          P  Y LL+QF NPANP+IH +TTGPEIW+D+ G+VD FIS     
Sbjct: 119 MKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTG 178
Query: 186 XXXXXXXRFLK 196
                  R++K
Sbjct: 179 GTLTGVTRYIK 189

>pdb|1D6S|A Chain A, Crystal Structure Of The K41a Mutant Of O-Acetylserine Sulfhydrylase Complexed In External Aldimine Linkage With Methionine Length = 322

Iteration: 1
 Score =  163 bits (412), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 5/191 (2%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I  D +  IG+TP+V LN + +G   RI AK+E+  P  SV  RI  +MI DAE +G++ 
Sbjct: 3   IYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVACRIGANMIWDAEKRGVLK 59
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG   L+E T+GNTG+ LA++AAARGY L + MP T S+ERR +L+ALGA ++L + A  
Sbjct: 60  PG-VELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKG 118
Query: 127 FXXXXXXXXXXXXXTPDGY-LLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXX 185
                          P  Y LL+QF NPANP+IH +TTGPEIW+D+ G+VD FIS     
Sbjct: 119 MKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTG 178
Query: 186 XXXXXXXRFLK 196
                  R++K
Sbjct: 179 GTLTGVTRYIK 189

>pdb|1VE1|A Chain A, Crystal Structure Of T.Th. Hb8 O-Acetylserine Sulfhydrylase Length = 304

Iteration: 1
 Score =  163 bits (412), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 84/192 (43%), Positives = 118/192 (61%), Gaps = 2/192 (1%)
Query: 15  IGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGK-TTLI 73
           IG TP+V L  VV+  +A +  KLE + P  S+KDR A+ MIKDAE++G++ PG    ++
Sbjct: 7   IGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIV 66
Query: 74  EVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFXXXXXX 133
           E TSGNTG+GLA IAA+RGY LI+ MP+  S ER+ VL+A GAE++L D   R       
Sbjct: 67  EPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREE 126
Query: 134 XXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXXXXXXXXR 193
                      ++  QF+NPAN + HYETTGPE+++   G++DAF+             R
Sbjct: 127 ALRLKEEL-GAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGR 185
Query: 194 FLKENNPDIKVV 205
           +LKE  P +KV+
Sbjct: 186 YLKERIPHVKVI 197

>pdb|2EGU|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrase From Geobacillus Kaustophilus Hta426 Length = 308

Iteration: 1
 Score =  158 bits (400), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 120/195 (61%), Gaps = 4/195 (2%)
Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKT 70
           +TELIG+TP V LN +VD   A +  KLE M P SSVKDRIA +MI+ AE  G + PG T
Sbjct: 8   ITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPGDT 67
Query: 71  TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFXXX 130
            ++E TSGNTG+GLA +AAA+GY  ++VMP T S+ERR +LRA GAE++L   A      
Sbjct: 68  -IVEPTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGA 126
Query: 131 XXXXXXXXXXTPDGYLL-RQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXXXXX 189
                        GY + +QF+N ANP+IH  TTG EI +  G ++DAF++         
Sbjct: 127 IAKAEELVRE--HGYFMPQQFKNEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTIT 184
Query: 190 XXXRFLKENNPDIKV 204
              + L+E  P+IK+
Sbjct: 185 GAGKVLREAYPNIKI 199

>pdb|2BHS|A Chain A, Crystal Structure Of Cysteine Synthase B Length = 303

Iteration: 1
 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/193 (42%), Positives = 108/193 (55%), Gaps = 2/193 (1%)
Query: 13  ELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTL 72
           + IGNTP+V L  +     + +  KLE   P  SVKDR A SMI +AE +G I PG   L
Sbjct: 6   QTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDV-L 64
Query: 73  IEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFXXXXX 132
           IE TSGNTG+ LA IAA +GY + ++MP   S ERR  +RA GAE+IL  +  +      
Sbjct: 65  IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILV-TKEQGMEGAR 123
Query: 133 XXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXXXXXXXX 192
                     +G LL QF NP NP  HY TTGPEIWQ +GG++  F+S            
Sbjct: 124 DLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVS 183
Query: 193 RFLKENNPDIKVV 205
           RF++E +  + +V
Sbjct: 184 RFMREQSKPVTIV 196

>pdb|2BHT|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase B Length = 303

Iteration: 1
 Score =  149 bits (377), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 107/193 (55%), Gaps = 2/193 (1%)
Query: 13  ELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTL 72
           + IGNTP+V L  +     + +  KLE   P  SV DR A SMI +AE +G I PG   L
Sbjct: 6   QTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVXDRAALSMIVEAEKRGRIKPGDV-L 64
Query: 73  IEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFXXXXX 132
           IE TSGNTG+ LA IAA +GY + ++MP   S ERR  +RA GAE+IL  +  +      
Sbjct: 65  IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILV-TKEQGMEGAR 123
Query: 133 XXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXXXXXXXX 192
                     +G LL QF NP NPK HY TTGPEIWQ +GG++  F+S            
Sbjct: 124 DLALEMANRGEGKLLDQFNNPDNPKAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVS 183
Query: 193 RFLKENNPDIKVV 205
            F++E +  + +V
Sbjct: 184 EFMREQSKPVTIV 196

>pdb|4AIR|A Chain A, Leishmania Major Cysteine Synthase Length = 354

Iteration: 1
 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/199 (38%), Positives = 111/199 (55%), Gaps = 1/199 (0%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           + + + +LIG TP +YLN + +   A++  K+E   P +SVKDR+ +++   AE +G + 
Sbjct: 32  VAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLI 90
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGK+ ++E +SGNTGV LA + A RGY +II MP + S+ERR +LR  GAE+IL  +AL 
Sbjct: 91  PGKSVVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALG 150
Query: 127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                          P+  L  QF    N  IH ETTGPEIW+ +   VD FI+      
Sbjct: 151 MKGAVTMAKKIVTANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGG 210
Query: 187 XXXXXXRFLKENNPDIKVV 205
                 R LK+     ++V
Sbjct: 211 TLTGVARALKKMGSHARIV 229

>pdb|2V03|A Chain A, High Resolution Structure And Catalysis Of An O- Acetylserine Sulfhydrylase Length = 303

Iteration: 1
 Score =  149 bits (375), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 107/193 (55%), Gaps = 2/193 (1%)
Query: 13  ELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTL 72
           + IGNTP+V L  +     + +  KLE   P  SV DR A SMI +AE +G I PG   L
Sbjct: 6   QTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVXDRAALSMIVEAEKRGEIKPGDV-L 64
Query: 73  IEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFXXXXX 132
           IE TSGNTG+ LA IAA +GY + ++MP   S ERR  +RA GAE+IL  +  +      
Sbjct: 65  IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILV-TKEQGMEGAR 123
Query: 133 XXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXXXXXXXX 192
                     +G LL QF NP NP  HY TTGPEIWQ +GG++  F+S            
Sbjct: 124 DLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVS 183
Query: 193 RFLKENNPDIKVV 205
           RF++E +  + +V
Sbjct: 184 RFMREQSKPVTIV 196

>pdb|2JC3|A Chain A, Structure Of O-acetylserine Sulfhydrylase B From Salmonella Typhimurium Length = 303

Iteration: 1
 Score =  149 bits (375), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/193 (42%), Positives = 106/193 (54%), Gaps = 2/193 (1%)
Query: 13  ELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTL 72
           + IGNTP+V L  +     + I  KLE   P  SVKDR A SMI +AE +G I PG   L
Sbjct: 6   QTIGNTPLVKLQRIGPDNGSEIWVKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDV-L 64
Query: 73  IEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFXXXXX 132
           IE TSGNTG+ LA IAA +GY + ++MP   S ERR  +RA GAE+IL  +  +      
Sbjct: 65  IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILV-TKEQGMEGAR 123
Query: 133 XXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXXXXXXXX 192
                     +G LL QF NP NP  HY TTGPEIW+ + G++  F+S            
Sbjct: 124 DLALAMSERGEGKLLDQFNNPDNPYAHYTTTGPEIWRQTSGRITHFVSSMGTTGTITGVS 183
Query: 193 RFLKENNPDIKVV 205
           RFL+E    + +V
Sbjct: 184 RFLREQEKPVTIV 196

>pdb|3T4P|A Chain A, Crystal Structure Of O-Acetyl Serine Sulfhydrylase From Leishmania Donovani In Complex With Designed Tetrapeptide Length = 334

Iteration: 1
 Score =  147 bits (370), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 110/199 (55%), Gaps = 1/199 (0%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           + + + +LIG TP +YLN + +   A++  K+E   P +SV DR+ +++   AE +G + 
Sbjct: 11  VAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVXDRLGFAIYDKAEKEGKLI 69
Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGK+ ++E +SGNTGV LA + A RGY +II MP + S+ERR +LR  GAE+IL  +AL 
Sbjct: 70  PGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALG 129
Query: 127 FXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXX 186
                          P+  L  QF    N  IH ETTGPEIW+ +   VD FI+      
Sbjct: 130 MKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGG 189
Query: 187 XXXXXXRFLKENNPDIKVV 205
                 R LK+     ++V
Sbjct: 190 TLTGVARALKKMGSHARIV 208

>pdb|1M54|A Chain A, Cystathionine-Beta Synthase: Reduced Vicinal Thiols Length = 363

Iteration: 1
 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/201 (40%), Positives = 108/201 (53%), Gaps = 6/201 (2%)
Query: 10  DVTELIGNTPMVYLNNVVD--GCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITP 67
           D+ + IG+TPMV +N +    G    + AK E      SVKDRI+  MI+DAE  G + P
Sbjct: 36  DILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKP 95
Query: 68  GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF 127
           G T +IE TSGNTG+GLA  AA RGY  IIVMP   S E+  VLRALGAEI+   +  RF
Sbjct: 96  GDT-IIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARF 154
Query: 128 XXXXXXXXXX---XXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXX 184
                            P+ ++L Q+ N +NP  HY+TT  EI Q   GK+D  ++    
Sbjct: 155 DSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGT 214
Query: 185 XXXXXXXXRFLKENNPDIKVV 205
                   R LKE  P  +++
Sbjct: 215 GGTITGIARKLKEKCPGCRII 235

>pdb|1JBQ|A Chain A, Structure Of Human Cystathionine Beta-Synthase: A Unique Pyridoxal 5'- Phosphate Dependent Hemeprotein Length = 435

Iteration: 1
 Score =  136 bits (343), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 82/201 (40%), Positives = 108/201 (53%), Gaps = 6/201 (2%)
Query: 10  DVTELIGNTPMVYLNNVVD--GCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITP 67
           D+ + IG+TPMV +N +    G    + AK E      SVKDRI+  MI+DAE  G + P
Sbjct: 101 DILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKP 160
Query: 68  GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF 127
           G T +IE TSGNTG+GLA  AA RGY  IIVMP   S E+  VLRALGAEI+   +  RF
Sbjct: 161 GDT-IIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARF 219
Query: 128 XXXXXXXXXX---XXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXX 184
                            P+ ++L Q+ N +NP  HY+TT  EI Q   GK+D  ++    
Sbjct: 220 DSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGT 279
Query: 185 XXXXXXXXRFLKENNPDIKVV 205
                   R LKE  P  +++
Sbjct: 280 GGTITGIARKLKEKCPGCRII 300

>pdb|1Y7L|A Chain A, O-Acetylserine Sulfhydrylase Complex Length = 316

Iteration: 1
 Score =  134 bits (337), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 99/167 (59%), Gaps = 4/167 (2%)
Query: 6   AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           AI  D +  IGNTP+V L +   G    +  K+E   P  SV  RI  +M+  AE  G +
Sbjct: 2   AIYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVXCRIGANMVWQAEKDGTL 59
Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
           T GK  +++ TSGNTG+ LA++AAARGY + + MP T S+ER+ +L  LG  ++L + A 
Sbjct: 60  TKGKE-IVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAK 118
Query: 126 RFXXXXXXXXXXXXXTPDGY-LLRQFENPANPKIHYETTGPEIWQDS 171
                           P  Y +L+QFENPANP+IH ETTGPEIW+D+
Sbjct: 119 GMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDT 165

>pdb|3PC2|A Chain A, Full Length Structure Of Cystathionine Beta-Synthase From Drosophila Length = 527

Iteration: 1
 Score =  132 bits (333), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
Query: 7   IKRDVTELIGNTPMVYLNNV--VDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGL 64
           I  ++ E+IG TP+V LNN+   DG    + AK E + P  SVKDRI Y M++DAE++GL
Sbjct: 50  ITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGL 109
Query: 65  ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124
           + PG  T+IE TSGNTG+GLA   A +GY  IIVMP   S E+   LR LGA+II   + 
Sbjct: 110 LKPG-YTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTE 168
Query: 125 LRFXXXX---XXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISX 181
             +                TP+  +L Q+ N  NP  HY+ T  EI      KVD  +  
Sbjct: 169 AAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKVDMIVVS 228
Query: 182 XXXXXXXXXXXRFLKENNPDIKVV 205
                      R +KE  P  ++V
Sbjct: 229 AGTAGTISGIGRKIKEQVPSCQIV 252

>pdb|3FCA|A Chain A, Genetic Incorporation Of A Metal-Ion Chelating Amino Acid Into Proteins As Biophysical Probe Length = 291

Iteration: 1
 Score =  124 bits (310), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 14  LIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLI 73
           LIG+TP+V L    D   +RI  KLE   P  SVKDR A  MI DAE +GL+   K  ++
Sbjct: 5   LIGSTPIVRL----DSIDSRIXLKLEKNNPGGSVKDRPALFMILDAEKRGLL---KNGIV 57
Query: 74  EVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFXXXXXX 133
           E TSGN G+ +A I A RG+ +I+ MP T S+ERR VL+ LGAE++L    L        
Sbjct: 58  EPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEK 117
Query: 134 XXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXXXXXXXXR 193
                  T   ++L QFENP N   H  TTGPEI +    ++DAF++            R
Sbjct: 118 ALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGR 176
Query: 194 FLK 196
            LK
Sbjct: 177 VLK 179

>pdb|1O58|A Chain A, Crystal Structure Of O-Acetylserine Sulfhydrylase (Tm0665) From Thermotoga Maritima At 1.80 A Resolution Length = 303

Iteration: 1
 Score =  123 bits (309), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 14  LIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLI 73
           LIG+TP+V L    D   +RI  KLE   P  SVKDR A  MI DAE +GL+   K  ++
Sbjct: 17  LIGSTPIVRL----DSIDSRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLL---KNGIV 69
Query: 74  EVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFXXXXXX 133
           E TSGN G+ +A I A RG+ +I+ MP T S+ERR VL+ LGAE++L    L        
Sbjct: 70  EPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEK 129
Query: 134 XXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXXXXXXXXXR 193
                  T   ++L QFENP N   H  TTGPEI +    ++DAF++            R
Sbjct: 130 ALEISRET-GAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGR 188
Query: 194 FLK 196
            LK
Sbjct: 189 VLK 191

>pdb|3DWG|A Chain A, Crystal Structure Of A Sulfur Carrier Protein Complex Found In The Cysteine Biosynthetic Pathway Of Mycobacterium Tuberculosis Length = 325

Iteration: 1
 Score =  123 bits (308), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 104/200 (52%), Gaps = 9/200 (4%)
Query: 13  ELIGNTPMVYLNNVV-------DGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           + +GNTP+V L  +        DG   R+ AKLE   P  S+KDR A  MI+ AE  GL+
Sbjct: 11  QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLL 70
Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
            PG  T++E TSGNTG+ LA  A  +GY LI VMP   S+ERR +L   GA+II + +  
Sbjct: 71  RPG-ATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEG 129
Query: 126 RFXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXX 185
                           P   +L Q+ NPAN   HY  TGPE+  D   ++  F++     
Sbjct: 130 GSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADL-PEITHFVAGLGTT 188
Query: 186 XXXXXXXRFLKENNPDIKVV 205
                  RFL+E+  ++K+V
Sbjct: 189 GTLMGTGRFLREHVANVKIV 208

>pdb|3DWI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cysm, The Cysteine Synthase B Length = 323

Iteration: 1
 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 13  ELIGNTPMVYLNNVV-------DGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           + +GNTP+V L  +        DG   R+ AKLE   P  S+KDR A  MI+ AE  GL+
Sbjct: 9   QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLL 68
Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
            PG  T++E TSGNTG+ LA  A  +GY LI VMP   S+ERR +L   GA+II + +  
Sbjct: 69  RPG-ATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEG 127
Query: 126 RFXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXX 185
                           P   +L Q+ NPAN   HY  TGPE+  D   ++  F++     
Sbjct: 128 GSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADL-PEITHFVAGLGTT 186
Query: 186 XXXXXXXRFLKENNPDIKVV 205
                  RFL+E+  ++ +V
Sbjct: 187 GTLMGTGRFLREHVANVAIV 206

>pdb|3DKI|A Chain A, 2.1 A X-Ray Structure Of Cysm (Rv1336) From Mycobacterium Tuberculosis An O-Phosphoserine Dependent Cysteine Synthase Length = 326

Iteration: 1
 Score =  121 bits (303), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/200 (37%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 13  ELIGNTPMVYLNNVV-------DGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           + +GNTP+V L  +        DG   R+ AKLE   P  S+ DR A  MI+ AE  GL+
Sbjct: 12  QALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIXDRPAVRMIEQAEADGLL 71
Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
            PG  T++E TSGNTG+ LA  A  +GY LI VMP   S+ERR +L   GA+II + +  
Sbjct: 72  RPG-ATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEG 130
Query: 126 RFXXXXXXXXXXXXXTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISXXXXX 185
                           P   +L Q+ NPAN   HY  TGPE+  D   ++  F++     
Sbjct: 131 GSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADL-PEITHFVAGLGTT 189
Query: 186 XXXXXXXRFLKENNPDIKVV 205
                  RFL+E+  ++K+V
Sbjct: 190 GTLMGTGRFLREHVANVKIV 209

>pdb|3BM5|A Chain A, Crystal Structure Of O-Acetyl-Serine Sulfhydrylase From Entamoeba Histolytica In Complex With Cysteine Length = 338

Iteration: 1
 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCV----ARIAAKLETMEPCSSVKDRIAYSMIKDAEDK 62
           I  ++ E IG TP+V L+ V +        RI  KLE   P SSVKDR+ ++++  A   
Sbjct: 12  IYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKD 71
Query: 63  GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
           G + PG   +IE TSGNTG+ L    A  GY + I MPST S+ER+++++A GAE+IL +
Sbjct: 72  GRLKPG-MEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTE 130
Query: 123 SALRFXXXXXXXXXXXXXTPDGYLL-RQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
                              P  Y +  QF NP N   H+ T   EIW+D+ G+VD  +S
Sbjct: 131 GKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGEVDIVVS 188

>pdb|2PQM|A Chain A, Crystal Structure Of Cysteine Synthase (Oass) From Entamoeba Histolytica At 1.86 A Resolution Length = 343

Iteration: 1
 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCV----ARIAAKLETMEPCSSVKDRIAYSMIKDAEDK 62
           I  ++ E IG TP+V L+ V +        RI  KLE   P SSVKDR+ ++++  A   
Sbjct: 13  IYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKD 72
Query: 63  GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
           G + PG   +IE TSGNTG+ L    A  GY + I MPST S+ER+++++A GAE+IL +
Sbjct: 73  GRLKPG-MEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTE 131
Query: 123 SALRFXXXXXXXXXXXXXTPDGYLL-RQFENPANPKIHYETTGPEIWQDSGGKVDAFIS 180
                              P  Y +  QF NP N   H+ T   EIW+D+ G+VD  +S
Sbjct: 132 GKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHHYTAN-EIWEDTDGEVDIVVS 189

>pdb|1WKV|A Chain A, Crystal Structure Of O-Phosphoserine Sulfhydrylase Length = 389

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 10/179 (5%)
Query: 33  RIAAKLETMEPCS-SVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR 91
           R+  KLE   P S SVKDR A  +I     +  +  G + + + TS N GV L+ +A   
Sbjct: 111 RVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEKG-SLVADATSSNFGVALSAVARLY 167
Query: 92  GYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFXXXXXXXXXXXXXTPDGYL-LRQF 150
           GY   + +P       +++ R LGA++I+   A                  +G++ + QF
Sbjct: 168 GYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAP--STVHLLPRVMKDSKNEGFVHVNQF 225
Query: 151 ENPANPKIHYETTGPEIWQDS---GGKVDAFISXXXXXXXXXXXXRFLKENNPDIKVVL 206
            N AN + H   T  EI+  S   G  +                  +L+  +P I+ VL
Sbjct: 226 YNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVL 284

>pdb|1TDJ|A Chain A, Threonine Deaminase (Biosynthetic) From E. Coli Length = 514

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           ++  V E    TP+  +  +       I  K E  +P  S K R AY+M+      GL  
Sbjct: 21  LRAPVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMA-----GLTE 75
Query: 67  PGKTT-LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
             K   +I  ++GN   G+AF +A  G   +IVMP+  +  +   +R  G E++L
Sbjct: 76  EQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLL 130

>pdb|1VE5|A Chain A, Crystal Structure Of T.Th. Hb8 Threonine Deaminase Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           ++D  A  R +      TP++    +      R+  K E ++   S K R A S      
Sbjct: 4   LQDLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALS------ 57
Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII 119
            K L       L+ V+SGN   G+A+ A   G   ++VMP   S  ++   RA GAE++
Sbjct: 58  -KALALENPKGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVV 115

>pdb|4D9K|A Chain A, Crystal Structure Of Escherichia Coli Diaminopropionate Ammonia Lyase In Apo Form Length = 398

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 69  KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
           K T    T GN G G+A+ A   G N +I MP   + ER   +  LGAE I+ D
Sbjct: 112 KMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTD 165

>pdb|4D9M|A Chain A, Crystal Structure Of Diaminopropionate Ammonia Lyase From Escherichia Coli In Complex With Aminoacrylate-Plp Azomethine Reaction Intermediate Length = 398

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 69  KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
           K T    T GN G G+A+ A   G N +I MP   + ER   +  LGAE I+ D
Sbjct: 112 KMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTD 165

>pdb|4D9I|A Chain A, Crystal Structure Of Holo Diaminopropionate Ammonia Lyase From Escherichia Coli Length = 398

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 69  KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
           K T    T GN G G+A+ A   G N +I MP   + ER   +  LGAE I+ D
Sbjct: 112 KMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTD 165

>pdb|3VSC|A Chain A, Crystal Structure Of The K127a Mutant Of O-Phosphoserine Sulfhydrylase Complexed With External Schiff Base Of Pyridoxal 5'-Phosphate With O- Phospho-L-Serine Length = 389

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 10/179 (5%)
Query: 33  RIAAKLETMEPCS-SVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR 91
           R+  KLE   P S SV DR A  +I     +  +  G + + + TS N GV L+ +A   
Sbjct: 111 RVWLKLEWYNPFSLSVADRPAVEIISRLSRR--VEKG-SLVADATSSNFGVALSAVARLY 167
Query: 92  GYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFXXXXXXXXXXXXXTPDGYL-LRQF 150
           GY   + +P       +++ R LGA++I+   A                  +G++ + QF
Sbjct: 168 GYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAP--STVHLLPRVMKDSKNEGFVHVNQF 225
Query: 151 ENPANPKIHYETTGPEIWQDS---GGKVDAFISXXXXXXXXXXXXRFLKENNPDIKVVL 206
            N AN + H   T  EI+  S   G  +                  +L+  +P I+ VL
Sbjct: 226 YNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVL 284

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	210
1z7w_A	322	Cysteine synthase; transferase; HET: PLP; 2.20A {A	1e-128
4aec_A	430	Cysteine synthase, mitochondrial; lyase, cysteine	1e-127
3tbh_A	334	O-acetyl serine sulfhydrylase; cysteine synthase,	1e-126
2q3b_A	313	Cysteine synthase A; pyridoxal-5'-phosphate, sulph	1e-125
1ve1_A	304	O-acetylserine sulfhydrylase; PLP, transferase, ri	1e-121
1y7l_A	316	O-acetylserine sulfhydrylase, O-acetylserine (thio	1e-119
2egu_A	308	Cysteine synthase; O-acetylserine sulfhydrase, str	1e-117
2pqm_A	343	Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.8	1e-115
2v03_A	303	Cysteine synthase B; pyridoxal phosphate, cysteine	1e-114
1o58_A	303	O-acetylserine sulfhydrylase; TM0665, structural g	1e-109
3dwg_A	325	Cysteine synthase B; sulfur carrier protein comple	1e-108
1jbq_A	435	B, cystathionine beta-synthase, serine sulfhydrase	1e-103
3pc3_A	527	CG1753, isoform A; CBS, synthase, PLP, heme, amino	1e-102
1wkv_A	389	Cysteine synthase; homodimer, open alpha/beta fold	9e-99
2d1f_A	360	Threonine synthase; amino acid synthesis, pyridoxa	1e-15
1e5x_A	486	Threonine synthase; threonine biosynthesis, PLP en	3e-15
2zsj_A	352	Threonine synthase; PLP dependent enzyme, lyase; H	7e-14
1p5j_A	372	L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo	1e-13
3aey_A	351	Threonine synthase; PLP, pyridoxal phosphate, lyas	3e-13
1ve5_A	311	Threonine deaminase; riken structural genomics/Pro	4e-13
1v71_A	323	Serine racemase, hypothetical protein C320.14 in c	5e-13
2rkb_A	318	Serine dehydratase-like; PLP bound enzyme, enzyme	9e-13
3l6b_A	346	Serine racemase; pyridoxal phosphate, PLP, isomera	1e-12
4d9i_A	398	Diaminopropionate ammonia-lyase; fold type II PLP-	4e-12
2gn0_A	342	Threonine dehydratase catabolic; TDCB, biodegradat	9e-12
3ss7_X	442	D-serine dehydratase; type II fold, ALFA,beta-elim	9e-10
1tdj_A	514	Biosynthetic threonine deaminase; allostery, coope	1e-09
3iau_A	366	Threonine deaminase; pyridoxal phosphate, amino-ac	1e-09
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	4e-04
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	8e-04

>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A* Length = 322

 Score =  363 bits (934), Expect = e-128
 Identities = 138/199 (69%), Positives = 166/199 (83%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I +DVTELIGNTP+VYLNNV +GCV R+AAKLE MEPCSSVKDRI +SMI DAE KGLI 
Sbjct: 5   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 64

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG++ LIE TSGNTGVGLAF AAA+GY LII MP++ S ERRI+L A G E++L D A  
Sbjct: 65  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 124

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
            +  + K EEIL KTP+GY+L+QFENPANPKIHYETTGPEIW+ +GGK+D F+SGIGTGG
Sbjct: 125 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 184

Query: 187 TVTGAGRFLKENNPDIKVV 205
           T+TGAG++LKE N ++K+ 
Sbjct: 185 TITGAGKYLKEQNANVKLY 203

>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana} Length = 430

 Score =  364 bits (937), Expect = e-127
 Identities = 132/199 (66%), Positives = 163/199 (81%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I  +V++LIG TPMVYLN++  GCVA IAAKLE MEPC SVKDRI YSM+ DAE KG I+
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFIS 172

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGK+ L+E TSGNTG+GLAFIAA+RGY LI+ MP++ SMERR++L+A GAE++L D A  
Sbjct: 173 PGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKG 232

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
               ++K EEILK TPD Y+L+QF+NPANPKIHYETTGPEIW D+ GKVD F++GIGTGG
Sbjct: 233 MTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGG 292

Query: 187 TVTGAGRFLKENNPDIKVV 205
           T+TG GRF+KE NP  +V+
Sbjct: 293 TITGVGRFIKEKNPKTQVI 311

>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3t4p_A* 3spx_A* 4air_A* Length = 334

 Score =  358 bits (921), Expect = e-126
 Identities = 85/199 (42%), Positives = 127/199 (63%), Gaps = 1/199 (0%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           + + + +LIG TP +YLN + +   A++  K+E   P +SVKDR+ +++   AE +G + 
Sbjct: 11  VAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLI 69

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PGK+ ++E +SGNTGV LA + A RGY +II MP + S+ERR +LR  GAE+IL  +AL 
Sbjct: 70  PGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALG 129

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
            +  +   ++I+   P+  L  QF    N  IH ETTGPEIW+ +   VD FI+G+GTGG
Sbjct: 130 MKGAVAMAKKIVAANPNAVLADQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGG 189

Query: 187 TVTGAGRFLKENNPDIKVV 205
           T+TG  R LK+     ++V
Sbjct: 190 TLTGVARALKKMGSHARIV 208

>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A Length = 313

 Score =  356 bits (915), Expect = e-125
 Identities = 100/200 (50%), Positives = 133/200 (66%), Gaps = 1/200 (0%)

Query: 6   AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           +I  D+T+LIG TP+V L  V DG VA I AKLE   P +SVKDRI  +M++ AE  GLI
Sbjct: 5   SIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLI 64

Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
            P  T ++E TSGNTG+ LA + AARGY  ++ MP T S+ERR++LRA GAE+IL   A 
Sbjct: 65  KPD-TIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGAD 123

Query: 126 RFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTG 185
                + K EE+ K     ++ +QFENPANP IH  TT  E+W+D+ GKVD  ++G+GTG
Sbjct: 124 GMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTG 183

Query: 186 GTVTGAGRFLKENNPDIKVV 205
           GT+TG  + +KE  P  + V
Sbjct: 184 GTITGVAQVIKERKPSARFV 203

>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A* Length = 304

 Score =  344 bits (884), Expect = e-121
 Identities = 97/196 (49%), Positives = 134/196 (68%), Gaps = 2/196 (1%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGK- 69
           V   IG TP+V L  VV+  +A +  KLE + P  S+KDR A+ MIKDAE++G++ PG  
Sbjct: 3   VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSG 62

Query: 70  TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEE 129
             ++E TSGNTG+GLA IAA+RGY LI+ MP+  S ER+ VL+A GAE++L D   R   
Sbjct: 63  QVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLA 122

Query: 130 ILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT 189
             E+    LK+    ++  QF+NPAN + HYETTGPE+++   G++DAF+ G GTGGT+T
Sbjct: 123 AREEALR-LKEELGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTIT 181

Query: 190 GAGRFLKENNPDIKVV 205
           G GR+LKE  P +KV+
Sbjct: 182 GVGRYLKERIPHVKVI 197

>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A* Length = 316

 Score =  339 bits (871), Expect = e-119
 Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 5/202 (2%)

Query: 6   AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           AI  D +  IGNTP+V L +   G    +  K+E   P  SVK RI  +M+  AE  G +
Sbjct: 2   AIYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTL 59

Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
           T GK  +++ TSGNTG+ LA++AAARGY + + MP T S+ER+ +L  LG  ++L + A 
Sbjct: 60  TKGKE-IVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAK 118

Query: 126 RFEEILEKGEEILKKTPDGY-LLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGT 184
             +  + K EEI+   P  Y +L+QFENPANP+IH ETTGPEIW+D+ GKVD  ++G+GT
Sbjct: 119 GMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGT 178

Query: 185 GGTVTGAGRFLK-ENNPDIKVV 205
           GG++TG  R +K +    I  V
Sbjct: 179 GGSITGISRAIKLDFGKQITSV 200

>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus} Length = 308

 Score =  335 bits (861), Expect = e-117
 Identities = 100/199 (50%), Positives = 138/199 (69%), Gaps = 2/199 (1%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
               +TELIG+TP V LN +VD   A +  KLE M P SSVKDRIA +MI+ AE  G + 
Sbjct: 4   TVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLK 63

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG  T++E TSGNTG+GLA +AAA+GY  ++VMP T S+ERR +LRA GAE++L   A  
Sbjct: 64  PG-DTIVEPTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQG 122

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
               + K EE+++     ++ +QF+N ANP+IH  TTG EI +  G ++DAF++G+GTGG
Sbjct: 123 MRGAIAKAEELVR-EHGYFMPQQFKNEANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGG 181

Query: 187 TVTGAGRFLKENNPDIKVV 205
           T+TGAG+ L+E  P+IK+ 
Sbjct: 182 TITGAGKVLREAYPNIKIY 200

>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A* Length = 343

 Score =  330 bits (849), Expect = e-115
 Identities = 81/204 (39%), Positives = 118/204 (57%), Gaps = 7/204 (3%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCV----ARIAAKLETMEPCSSVKDRIAYSMIKDAEDK 62
           I  ++ E IG TP+V L+ V +        RI  KLE   P SSVKDR+ ++++  A   
Sbjct: 13  IYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKD 72

Query: 63  GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
           G + PG   +IE TSGNTG+ L    A  GY + I MPST S+ER+++++A GAE+IL +
Sbjct: 73  GRLKPG-MEIIESTSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTE 131

Query: 123 SALRFEEILEKGEEILKKTPDGY-LLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISG 181
                   +E+  +++K+ P  Y +  QF NP N   H+  T  EIW+D+ G+VD  +S 
Sbjct: 132 GKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAAHH-YTANEIWEDTDGEVDIVVSA 190

Query: 182 IGTGGTVTGAGRFLKENNPDIKVV 205
           +GT GTV G    LKE    IK++
Sbjct: 191 VGTSGTVIGVAEKLKEKKKGIKII 214

>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A* Length = 303

 Score =  326 bits (838), Expect = e-114
 Identities = 90/196 (45%), Positives = 119/196 (60%), Gaps = 2/196 (1%)

Query: 10  DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGK 69
            + + IGNTP+V L  +     + +  KLE   P  SVKDR A SMI +AE +G I PG 
Sbjct: 3   TLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG- 61

Query: 70  TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEE 129
             LIE TSGNTG+ LA IAA +GY + ++MP   S ERR  +RA GAE+IL       E 
Sbjct: 62  DVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEG 121

Query: 130 ILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT 189
             +   E+  +   G LL QF NP NP  HY TTGPEIWQ +GG++  F+S +GT GT+T
Sbjct: 122 ARDLALEMANRGE-GKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTIT 180

Query: 190 GAGRFLKENNPDIKVV 205
           G  RF++E +  + +V
Sbjct: 181 GVSRFMREQSKPVTIV 196

>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A* Length = 303

 Score =  315 bits (809), Expect = e-109
 Identities = 88/200 (44%), Positives = 123/200 (61%), Gaps = 9/200 (4%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
               +  LIG+TP+V L+++     +RI  KLE   P  SVKDR A  MI DAE +GL+ 
Sbjct: 10  HHHMMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLK 65

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
            G   ++E TSGN G+ +A I A RG+ +I+ MP T S+ERR VL+ LGAE++L    L 
Sbjct: 66  NG---IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELG 122

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
            +  +EK  EI +     ++L QFENP N   H  TTGPEI +    ++DAF++G+GTGG
Sbjct: 123 MKGAVEKALEISR-ETGAHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGG 181

Query: 187 TVTGAGRFLKE-NNPDIKVV 205
           T++G GR LK      +K+V
Sbjct: 182 TISGVGRVLKGFFGNGVKIV 201

>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} PDB: 3fgp_A* 3dki_A* 3dwi_A* Length = 325

 Score =  312 bits (801), Expect = e-108
 Identities = 83/207 (40%), Positives = 118/207 (57%), Gaps = 9/207 (4%)

Query: 6   AIKRDVTELIGNTPMVYLNNVV-------DGCVARIAAKLETMEPCSSVKDRIAYSMIKD 58
                + + +GNTP+V L  +        DG   R+ AKLE   P  S+KDR A  MI+ 
Sbjct: 4   TRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQ 63

Query: 59  AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118
           AE  GL+ PG  T++E TSGNTG+ LA  A  +GY LI VMP   S+ERR +L   GA+I
Sbjct: 64  AEADGLLRPG-ATILEPTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQI 122

Query: 119 ILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAF 178
           I + +       +   +E+    P   +L Q+ NPAN   HY  TGPE+  D   ++  F
Sbjct: 123 IFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANTDSHYCGTGPELLADL-PEITHF 181

Query: 179 ISGIGTGGTVTGAGRFLKENNPDIKVV 205
           ++G+GT GT+ G GRFL+E+  ++K+V
Sbjct: 182 VAGLGTTGTLMGTGRFLREHVANVKIV 208

>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A* Length = 435

 Score =  303 bits (778), Expect = e-103
 Identities = 90/204 (44%), Positives = 122/204 (59%), Gaps = 6/204 (2%)

Query: 7   IKRDVTELIGNTPMVYLNNVV--DGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGL 64
           I  D+ + IG+TPMV +N +    G    + AK E      SVKDRI+  MI+DAE  G 
Sbjct: 98  ILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGT 157

Query: 65  ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA 124
           + PG  T+IE TSGNTG+GLA  AA RGY  IIVMP   S E+  VLRALGAEI+   + 
Sbjct: 158 LKPG-DTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTN 216

Query: 125 LRFEE---ILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISG 181
            RF+     +     +  + P+ ++L Q+ N +NP  HY+TT  EI Q   GK+D  ++ 
Sbjct: 217 ARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVAS 276

Query: 182 IGTGGTVTGAGRFLKENNPDIKVV 205
           +GTGGT+TG  R LKE  P  +++
Sbjct: 277 VGTGGTITGIARKLKEKCPGCRII 300

>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A* Length = 527

 Score =  305 bits (782), Expect = e-102
 Identities = 86/210 (40%), Positives = 124/210 (59%), Gaps = 6/210 (2%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVV--DGCVARIAAKLETMEPCSSVKDRIAYSMIKD 58
           +     I  ++ E+IG TP+V LNN+   DG    + AK E + P  SVKDRI Y M++D
Sbjct: 44  IAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQD 103

Query: 59  AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI 118
           AE++GL+ PG  T+IE TSGNTG+GLA   A +GY  IIVMP   S E+   LR LGA+I
Sbjct: 104 AEEQGLLKPG-YTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKI 162

Query: 119 ILADSALRFEE---ILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKV 175
           I   +   ++    ++   +++ ++TP+  +L Q+ N  NP  HY+ T  EI      KV
Sbjct: 163 IRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAHYDGTAAEILWQLDNKV 222

Query: 176 DAFISGIGTGGTVTGAGRFLKENNPDIKVV 205
           D  +   GT GT++G GR +KE  P  ++V
Sbjct: 223 DMIVVSAGTAGTISGIGRKIKEQVPSCQIV 252

>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1 Length = 389

 Score =  290 bits (745), Expect = 9e-99
 Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 9/200 (4%)

Query: 10  DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCS-SVKDRIAYSMIKDAEDKGLITPG 68
           D  E    TP+V     +     R+  KLE   P S SVKDR A  +I     +  +  G
Sbjct: 89  DFFERGKPTPLVRSRLQLPNG-VRVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEKG 145

Query: 69  KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE 128
            + + + TS N GV L+ +A   GY   + +P       +++ R LGA++I+   A    
Sbjct: 146 -SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTV 204

Query: 129 EILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQD---SGGKVDAFISGIGTG 185
            +L +  +   K      + QF N AN + H   T  EI+      G  +      +GT 
Sbjct: 205 HLLPRVMK-DSKNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTS 263

Query: 186 GTVTGAGRFLKENNPDIKVV 205
           G ++ A  +L+  +P I+ V
Sbjct: 264 GHMSAAAFYLQSVDPSIRAV 283

>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis} Length = 360

 Score = 73.5 bits (181), Expect = 1e-15
 Identities = 46/185 (24%), Positives = 71/185 (38%), Gaps = 14/185 (7%)

Query: 16  GNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEV 75
           G TP++   N+       I  K+E + P  S KDR     + DA   G        ++  
Sbjct: 37  GGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ-----RAVLCA 91

Query: 76  TSGNTGVGLAFIAAARGYNLIIVMPS-TCSMERRIVLRALGAEIILADSALRFEEILEKG 134
           ++GNT    A  AA  G    +++P    +M +       GA+II  D    F++ LE  
Sbjct: 92  STGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDG--NFDDCLELA 149

Query: 135 EEILKKTPDGYLLRQFENPANPKIH--YETTGPEIWQDSGGKVDAFISGIGTGGTVTGAG 192
            ++    P   L+    N  NP      +T   EI    G   D     +G  G +T   
Sbjct: 150 RKMAADFPTISLV----NSVNPVRIEGQKTAAFEIVDVLGTAPDVHALPVGNAGNITAYW 205

Query: 193 RFLKE 197
           +   E
Sbjct: 206 KGYTE 210

>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A* Length = 486

 Score = 72.5 bits (178), Expect = 3e-15
 Identities = 36/184 (19%), Positives = 67/184 (36%), Gaps = 13/184 (7%)

Query: 16  GNTPMVYLNNVVD--GCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLI 73
           GN+ + +          +  +  K   +    S KD     ++        +      + 
Sbjct: 129 GNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVG 188

Query: 74  EVTSGNTGVGLAFIAAARGYNLIIVMPS-TCSMERRIVLRALGAEIILADSALRFEEILE 132
             ++G+T   L+   A+ G   I+ +P+   SM + +   A GA ++  D+   F+  ++
Sbjct: 189 CASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT--DFDGCMK 246

Query: 133 KGEEILKKTPDGYLLRQFENPANPKIH--YETTGPEIWQDSGGKV-DAFISGIGTGGTVT 189
              EI  + P  YL     N  N       +T   EI Q    +V D  I   G  G + 
Sbjct: 247 LIREITAELP-IYLA----NSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIY 301

Query: 190 GAGR 193
              +
Sbjct: 302 AFYK 305

>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus} Length = 352

 Score = 68.1 bits (167), Expect = 7e-14
 Identities = 43/186 (23%), Positives = 72/186 (38%), Gaps = 15/186 (8%)

Query: 16  GNTPMVYLNNVVD--GCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLI 73
           GNTP++  +N+    G   +I  K E + P  S KDR     I  A + G        +I
Sbjct: 29  GNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK-----RAVI 83

Query: 74  EVTSGNTGVGLAFIAAARGYNLIIVMPS-TCSMERRIVLRALGAEIILADSALRFEEILE 132
             ++GNT    A  AA  G    +++P    ++ +       GA+++       F++ L 
Sbjct: 84  CASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQG--TFDDALN 141

Query: 133 KGEEILKKTPDGYLLRQFENPANPKIH-YETTGPEIWQDSGGKVDAFISGIGTGGTVTGA 191
              +I +       +    NP   +I   +T   EI    G   D     +G  G +T  
Sbjct: 142 IVRKIGEN--FPVEIVNSVNPY--RIEGQKTAAFEICDTLGEAPDYHFIPVGNAGNITAY 197

Query: 192 GRFLKE 197
            +  K 
Sbjct: 198 WKGFKI 203

>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A* Length = 372

 Score = 67.3 bits (165), Expect = 1e-13
 Identities = 41/215 (19%), Positives = 72/215 (33%), Gaps = 27/215 (12%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIK--- 57
           M   +        L   TP+     +       +  K+++ +P  S K R      K   
Sbjct: 30  MGRGSEFMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWA 89

Query: 58  DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAE 117
                  +          ++GN G+  A+ A   G    IV+P T        L+  GA 
Sbjct: 90  KQGCAHFVCS--------SAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGAT 141

Query: 118 IILADSALRFEEILEKGEEILKKTPDGYLLRQFENP------ANPKIHYETTGPEIWQDS 171
             +       +E  E  + + K  P    +  F++P      A       +   E+ +  
Sbjct: 142 CKVVGEL--LDEAFELAKALAKNNPGWVYIPPFDDPLIWEGHA-------SIVKELKETL 192

Query: 172 GGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVV 205
             K  A    +G GG + G  + L+E    D+ V+
Sbjct: 193 WEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVI 227

>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A Length = 351

 Score = 66.5 bits (163), Expect = 3e-13
 Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 17/187 (9%)

Query: 16  GNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLI 73
           G+TP++ L    +      R+ AK E + P  S KDR     +  A + G        + 
Sbjct: 27  GSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVA 81

Query: 74  EVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSALRFEEILE 132
             ++GNT    A  AA  G   I+V+P+   ++ +       GA I+  +    F++ L 
Sbjct: 82  CASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEG--NFDDALR 139

Query: 133 KGEEILKKTPDGYLLRQFENPANPKIH--YETTGPEIWQDSGGKVDAFISGIGTGGTVTG 190
             +++ +  P   L+    N  NP      +T   E+  + G         +G  G +T 
Sbjct: 140 LTQKLTEAFP-VALV----NSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNAGNITA 194

Query: 191 AGRFLKE 197
                K 
Sbjct: 195 HWMGYKA 201

>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1 Length = 311

 Score = 65.6 bits (161), Expect = 4e-13
 Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 42/205 (20%)

Query: 18  TPMVY---LNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAED-KGLITPGKTTLI 73
           TP++    L+ ++     R+  K E ++   S K R A S     E+ KGL+        
Sbjct: 21  TPLLTSRLLDGLLG---KRLLLKAEHLQKTGSFKARGALSKALALENPKGLLA------- 70

Query: 74  EVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEK 133
            V+SGN   G+A+ A   G   ++VMP   S  ++   RA GAE++        +   E 
Sbjct: 71  -VSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEV 127

Query: 134 GEEILKKTPDGYLLRQFENPANPKIH-YE---------TTGPEIWQ---DSGGKVDAFIS 180
              + ++T  GY L          IH ++         T G E+       G    A ++
Sbjct: 128 ARALQEET--GYAL----------IHPFDDPLVIAGQGTAGLELLAQAGRMGVFPGAVLA 175

Query: 181 GIGTGGTVTGAGRFLKENNPDIKVV 205
            +G GG + G    +K  +P   V+
Sbjct: 176 PVGGGGLLAGLATAVKALSPTTLVL 200

>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A* Length = 323

 Score = 65.6 bits (161), Expect = 5e-13
 Identities = 39/208 (18%), Positives = 77/208 (37%), Gaps = 43/208 (20%)

Query: 15  IGNTPMVY---LNNVVDGCVARIAAKLETMEPCSSVKDRIAY----SMIKDAEDKGLITP 67
              TP++    +N       A +  K E  +   + K R A      + +     G++T 
Sbjct: 24  ANKTPVLTSSTVNKEFV---AEVFFKCENFQKMGAFKFRGALNALSQLNEAQRKAGVLT- 79

Query: 68  GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF 127
                   +SGN    +A  A   G    I+MP      +    +  G ++I+ D     
Sbjct: 80  -------FSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--K 130

Query: 128 EEILEKGEEILKKTPDGYLLRQFENPANPKIH-YE---------TTGPEIWQDSGGKVDA 177
           ++  +  +EI ++   G  +          I  Y+         T   E++++ G  +DA
Sbjct: 131 DDREKMAKEISERE--GLTI----------IPPYDHPHVLAGQGTAAKELFEEVGP-LDA 177

Query: 178 FISGIGTGGTVTGAGRFLKENNPDIKVV 205
               +G GG ++G+    +   P+ +V 
Sbjct: 178 LFVCLGGGGLLSGSALAARHFAPNCEVY 205

>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens} Length = 318

 Score = 64.9 bits (159), Expect = 9e-13
 Identities = 33/206 (16%), Positives = 69/206 (33%), Gaps = 36/206 (17%)

Query: 14  LIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIK---DAEDKGLITPGKT 70
               TP++    +       +  K E ++P  S K R      +       + L+     
Sbjct: 4   FHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGCRHLVCS--- 60

Query: 71  TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEI 130
                + GN G+  A+ A   G    IV+P + S++    L+  GAE+ L      ++E 
Sbjct: 61  -----SGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKV--WDEA 113

Query: 131 LEKGEEILKKTPDGYLLRQFENPANPKIH-YE---------TTGPEIWQDSGGKVDA-FI 179
             + +E+ K+   G+            +  ++         +   E+         A  +
Sbjct: 114 NLRAQELAKRD--GWEN----------VPPFDHPLIWKGHASLVQELKAVLRTPPGALVL 161

Query: 180 SGIGTGGTVTGAGRFLKENNPDIKVV 205
           +  G G         L+     + ++
Sbjct: 162 AVGGGGLLAGVVAGLLEVGWQHVPII 187

>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} PDB: 3l6r_A* 3hmk_A* 3l6c_A* Length = 346

 Score = 64.5 bits (158), Expect = 1e-12
 Identities = 44/208 (21%), Positives = 78/208 (37%), Gaps = 46/208 (22%)

Query: 18  TPMVY---LNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMI-----KDAEDK--GLITP 67
           TP++    LN +       +  K E  +   S K R A + +        E K   ++T 
Sbjct: 26  TPVLTSSILNQLTG---RNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKPKAVVT- 81

Query: 68  GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF 127
                   +SGN G  L + A   G    IV+P T    +++ ++A GA I+  + +   
Sbjct: 82  -------HSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPS--D 132

Query: 128 EEILEKGEEILKKTPDGYLLRQFENPANPKIH-YE---------TTGPEIWQDSGGKVDA 177
           E      + + ++T    ++          +H  +         T   E+       VDA
Sbjct: 133 ESRENVAKRVTEET--EGIM----------VHPNQEPAVIAGQGTIALEVLNQVPL-VDA 179

Query: 178 FISGIGTGGTVTGAGRFLKENNPDIKVV 205
            +  +G GG + G    +K   P +KV 
Sbjct: 180 LVVPVGGGGMLAGIAITVKALKPSVKVY 207

>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A* Length = 398

 Score = 63.3 bits (154), Expect = 4e-12
 Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 69  KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE 128
           K T    T GN G G+A+ A   G N +I MP   + ER   +  LGAE I+ D    ++
Sbjct: 112 KMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMN--YD 169

Query: 129 EILEKGEEILKKTPDGYLLRQFENPANPKIH------YETTGPEIWQ---DSGGKVDAFI 179
           + +    +  ++     +++        KI       Y T   E  +   + G      +
Sbjct: 170 DTVRLTMQHAQQH-GWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVL 228

Query: 180 SGIGTGGTVTGAGRFLKE--NNPDIKVV 205
              G G    G   +L +  +  ++  +
Sbjct: 229 LQAGVGAMAGGVLGYLVDVYSPQNLHSI 256

>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A Length = 442

 Score = 56.3 bits (136), Expect = 9e-10
 Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 16/184 (8%)

Query: 31  VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAA 90
           V   A KL       ++ D   YS +   E K      + ++   ++GN G+ +  ++A 
Sbjct: 126 VLAHAEKLALEAGLLTLDD--DYSKLLSPEFKQFF--SQYSIAVGSTGNLGLSIGIMSAR 181

Query: 91  RGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQF 150
            G+ + + M +     ++  LR+ G  ++  +    +   +E+G +  +  P+ + +   
Sbjct: 182 IGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQD--YGVAVEEGRKAAQSDPNCFFI-DD 238

Query: 151 ENPANPKIHYETTGPEI---WQDSGGKVDAF-----ISGIGTGGTVTGAGRFLKEN-NPD 201
           EN     + Y   G  +   +   G  VDA          G GG   G    LK      
Sbjct: 239 ENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDH 298

Query: 202 IKVV 205
           +   
Sbjct: 299 VHCF 302

>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2 Length = 514

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 39/210 (18%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMI----KDAEDKGLIT 66
           V E    TP+  +  +       I  K E  +P  S K R AY+M+    ++ +  G+IT
Sbjct: 25  VYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVIT 84

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA-DSAL 125
                    ++GN   G+AF +A  G   +IVMP+  +  +   +R  G E++L   +  
Sbjct: 85  A--------SAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGAN-- 134

Query: 126 RFEEILEKGEEILKKTPDGYLLRQFENPANPKIH-YE---------TTGPEIWQDSGGKV 175
            F+E   K  E+ ++   G+            +  ++         T   E+ Q     +
Sbjct: 135 -FDEAKAKAIELSQQQ--GFTW----------VPPFDHPMVIAGQGTLALELLQQD-AHL 180

Query: 176 DAFISGIGTGGTVTGAGRFLKENNPDIKVV 205
           D     +G GG   G    +K+  P IKV+
Sbjct: 181 DRVFVPVGGGGLAAGVAVLIKQLMPQIKVI 210

>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum} Length = 366

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 37/209 (17%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMI----KDAEDKGLIT 66
           V ++   +P+     + D        K E  +   S K R AY+M+    ++  DKG+IT
Sbjct: 54  VYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREELDKGVIT 113

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
                    ++GN   G+A           IVMP+T    +   +RALG +++L      
Sbjct: 114 --------ASAGNHAQGVALAGQRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGKT-- 163

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIH-YE---------TTGPEIWQDSGGKVD 176
           F+E      E+ +K   G             I  ++         T G EI +     + 
Sbjct: 164 FDEAQTHALELSEKD--GLKY----------IPPFDDPGVIKGQGTIGTEINRQL-KDIH 210

Query: 177 AFISGIGTGGTVTGAGRFLKENNPDIKVV 205
           A    +G GG + G   F K+  P+ K++
Sbjct: 211 AVFIPVGGGGLIAGVATFFKQIAPNTKII 239

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 35/153 (22%), Positives = 55/153 (35%), Gaps = 17/153 (11%)

Query: 52  AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI--AAARGYNLIIVMPSTCSMERRI 109
           AY M+   +    +  G   LI   SG  G+G   I      G   + V     S ++  
Sbjct: 206 AYRMLVS-DRGAQMKQGDIVLIWGASG--GLGSYAIQFVKNGGGIPVAV---VSSAQKEA 259

Query: 110 VLRALGA-EIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW 168
            +RALG   +I        ++I +    +++       L   +    P I +E TG   +
Sbjct: 260 AVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTF 319

Query: 169 QDS------GGKVDAFISGIGTGGTVTGAGRFL 195
             S      GG V     G  +G   T   R+L
Sbjct: 320 GLSVIVARRGGTV--VTCGSSSGYLHTFDNRYL 350

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score = 38.6 bits (90), Expect = 8e-04
 Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 17/153 (11%)

Query: 52  AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI--AAARGYNLIIVMPSTCSMERRI 109
           AY  +      G+   G   LI   SG  G+G      A A G N I V     S ++  
Sbjct: 214 AYRQLVSRNGAGM-KQGDNVLIWGASG--GLGSYATQFALAGGANPICV---VSSPQKAE 267

Query: 110 VLRALGAEIILADSALRFEEILEKGEEILKKTPD-GYLLRQFENPANPKIHYETTGPEIW 168
           + RA+GAE I+  +A  +    ++  +  K+    G  +R+     +  I +E  G E +
Sbjct: 268 ICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETF 327

Query: 169 QDS------GGKVDAFISGIGTGGTVTGAGRFL 195
             S      GG +        +G       R+L
Sbjct: 328 GASVFVTRKGGTIT--TCASTSGYMHEYDNRYL 358

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	210
3vc3_A	344	Beta-cyanoalnine synthase; beta-cyanoalanine synth	100.0
4aec_A	430	Cysteine synthase, mitochondrial; lyase, cysteine	100.0
3tbh_A	334	O-acetyl serine sulfhydrylase; cysteine synthase,	100.0
3dwg_A	325	Cysteine synthase B; sulfur carrier protein comple	100.0
1z7w_A	322	Cysteine synthase; transferase; HET: PLP; 2.20A {A	100.0
2v03_A	303	Cysteine synthase B; pyridoxal phosphate, cysteine	100.0
1y7l_A	316	O-acetylserine sulfhydrylase, O-acetylserine (thio	100.0
2q3b_A	313	Cysteine synthase A; pyridoxal-5'-phosphate, sulph	100.0
2pqm_A	343	Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.8	100.0
2egu_A	308	Cysteine synthase; O-acetylserine sulfhydrase, str	100.0
1ve1_A	304	O-acetylserine sulfhydrylase; PLP, transferase, ri	100.0
3l6b_A	346	Serine racemase; pyridoxal phosphate, PLP, isomera	100.0
1jbq_A	435	B, cystathionine beta-synthase, serine sulfhydrase	100.0
1o58_A	303	O-acetylserine sulfhydrylase; TM0665, structural g	100.0
3pc3_A	527	CG1753, isoform A; CBS, synthase, PLP, heme, amino	100.0
4h27_A	364	L-serine dehydratase/L-threonine deaminase; PLP de	100.0
2gn0_A	342	Threonine dehydratase catabolic; TDCB, biodegradat	100.0
1p5j_A	372	L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo	100.0
1ve5_A	311	Threonine deaminase; riken structural genomics/Pro	100.0
1v71_A	323	Serine racemase, hypothetical protein C320.14 in c	100.0
2rkb_A	318	Serine dehydratase-like; PLP bound enzyme, enzyme	100.0
1tdj_A	514	Biosynthetic threonine deaminase; allostery, coope	100.0
3aey_A	351	Threonine synthase; PLP, pyridoxal phosphate, lyas	100.0
2d1f_A	360	Threonine synthase; amino acid synthesis, pyridoxa	100.0
3iau_A	366	Threonine deaminase; pyridoxal phosphate, amino-ac	100.0
2zsj_A	352	Threonine synthase; PLP dependent enzyme, lyase; H	100.0
1j0a_A	325	1-aminocyclopropane-1-carboxylate deaminase; PLP d	100.0
3ss7_X	442	D-serine dehydratase; type II fold, ALFA,beta-elim	100.0
1f2d_A	341	1-aminocyclopropane-1-carboxylate deaminase; carbo	100.0
4d9b_A	342	D-cysteine desulfhydrase; fold type II PLP-depende	100.0
1wkv_A	389	Cysteine synthase; homodimer, open alpha/beta fold	100.0
4d9i_A	398	Diaminopropionate ammonia-lyase; fold type II PLP-	100.0
1tzj_A	338	ACC deaminase, 1-aminocyclopropane-1-carboxylate d	100.0
1x1q_A	418	Tryptophan synthase beta chain; structural genomic	100.0
1v8z_A	388	Tryptophan synthase beta chain 1; beta+alpha, rike	100.0
1qop_B	396	Tryptophan synthase beta chain; lyase, carbon-oxyg	100.0
1e5x_A	486	Threonine synthase; threonine biosynthesis, PLP en	100.0
2o2e_A	422	Tryptophan synthase beta chain; amino-acid biosynt	100.0
1vb3_A	428	Threonine synthase; PLP-dependent enzyme, lyase; H	100.0
4f4f_A	468	Threonine synthase; structural genomics, niaid, na	100.0
1kl7_A	514	Threonine synthase; threonine synthesis, pyridoxal	100.0
3v7n_A	487	Threonine synthase; ssgcid, structural genomics, s	99.97
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	96.27
1vp8_A	201	Hypothetical protein AF0103; putative pyruvate kin	94.52
3c85_A	183	Putative glutathione-regulated potassium-efflux S	94.44
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	94.27
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	94.15
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	93.9
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	93.78
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	93.67
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	93.63
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	93.43
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	93.32
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	93.11
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	93.05
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	93.03
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	93.02
4eye_A	342	Probable oxidoreductase; structural genomics, niai	93.01
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	92.95
3gms_A	340	Putative NADPH:quinone reductase; structural genom	92.8
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	92.46
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	92.45
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	92.44
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	92.39
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	92.01
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	91.9
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	91.77
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	91.75
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	91.68
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	91.68
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	91.57
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	91.49
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	91.43
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	91.33
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	91.3
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	91.29
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	91.23
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	91.19
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	91.17
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	91.16
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	91.08
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	91.06
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	91.04
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	90.9
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	90.9
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	90.83
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	90.7
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	90.66
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	90.64
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	90.64
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	90.61
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	90.58
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	90.52
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	90.5
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	90.49
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	90.49
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	90.39
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	90.38
1id1_A	153	Putative potassium channel protein; RCK domain, E.	90.32
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	90.26
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	90.25
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	90.2
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	90.19
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	90.15
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	90.1
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	90.09
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	89.99
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	89.98
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	89.96
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	89.94
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	89.93
1t57_A	206	Conserved protein MTH1675; structural genomics, FM	89.93
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	89.92
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	89.89
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	89.82
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	89.8
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	89.72
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	89.72
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	89.69
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	89.62
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	89.53
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	89.51
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	89.43
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	89.34
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	89.21
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	89.17
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	89.17
3imf_A	257	Short chain dehydrogenase; structural genomics, in	89.15
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	89.14
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	89.11
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	88.92
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	88.82
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	88.75
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	88.72
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	88.66
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	88.58
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	88.56
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	88.49
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	88.43
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	88.35
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	88.34
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	88.33
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	88.32
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	88.3
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	88.24
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	88.22
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	88.15
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	88.12
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	88.09
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	88.07
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	88.07
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	88.07
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	88.05
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	88.05
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	87.98
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	87.95
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	87.87
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	87.83
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	87.71
1xq1_A	266	Putative tropinone reducatse; structural genomics,	87.69
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	87.69
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	87.57
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	87.55
3cxt_A	291	Dehydrogenase with different specificities; rossma	87.51
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	87.48
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	87.46
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	87.42
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	87.39
3rih_A	293	Short chain dehydrogenase or reductase; structural	87.39
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	87.34
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	87.24
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	87.21
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	87.15
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	87.14
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	87.12
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	87.01
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	86.91
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	86.85
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	86.81
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	86.73
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	86.7
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	86.62
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	86.57
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	86.48
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	86.32
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	86.27
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	86.26
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	86.21
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	86.19
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	86.18
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	86.16
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	86.1
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	86.09
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	86.07
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	86.04
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	86.03
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	85.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	85.93
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	85.85
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	85.73
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	85.71
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	85.7
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	85.62
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	85.57
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	85.53
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	85.47
3tpf_A	307	Otcase, ornithine carbamoyltransferase; structural	85.23
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	85.15
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	85.08
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	85.06
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	85.04
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	85.04
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	85.03
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	85.02
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	84.96
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	84.88
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	84.78
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	84.47
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	84.47
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	84.45
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	84.4
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	84.4
1xkq_A	280	Short-chain reductase family member (5D234); parra	84.39
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	84.38
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	84.26
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	84.21
1xhl_A	297	Short-chain dehydrogenase/reductase family member	83.93
4ekn_B	306	Aspartate carbamoyltransferase; atcase, aspartate	83.92
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	83.92
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	83.8
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	83.78
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	83.74
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	83.73
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	83.6
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	83.54
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	83.45
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	83.44
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	83.35
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	83.3
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	83.23
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	83.15
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	83.15
4dqx_A	277	Probable oxidoreductase protein; structural genomi	83.01
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	83.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	82.86
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	82.82
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	82.75
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	82.7
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	82.51
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	82.39
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	81.98
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	81.86
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	81.84
4ep1_A	340	Otcase, ornithine carbamoyltransferase; structural	81.61
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	81.4
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	81.36
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	81.24
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	81.21
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	81.17
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	81.13
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	80.91
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	80.89
1pvv_A	315	Otcase, ornithine carbamoyltransferase; dodecamer;	80.88
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	80.83
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	80.48
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	80.42
3csu_A	310	Protein (aspartate carbamoyltransferase); transfer	80.4
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	80.24
1vlv_A	325	Otcase, ornithine carbamoyltransferase; TM1097, st	80.05

>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*

Probab=100.00  E-value=2.2e-54  Score=368.94  Aligned_cols=204  Identities=54%  Similarity=0.948  Sum_probs=191.4

Q ss_pred             hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGL   84 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~al   84 (210)
                      ..+.+.|.+.|++|||+++++|++.+|++||+|+|++|||||||+|++.+++.+|.++|.+.+++++||++|+||||+|+
T Consensus        23 ~~i~~~i~~lIG~TPLv~~~~Ls~~~G~~IylK~E~lnptGSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~al  102 (344)
T 3vc3_A           23 TNIKKHVSQLIGRTPLVYLNKVTEGCGAYVAVKQEMMQPTASIADRPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISM  102 (344)
T ss_dssp             CSCBSSGGGGSCCCCEEECCSTTTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHH
T ss_pred             hhhhccHhhhcCCCceEECcccchhhCCEEEEEecCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHH
Confidence            35678899999999999999999999999999999999999999999999999999999999988899999999999999


Q ss_pred             HHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372           85 AFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG  164 (210)
Q Consensus        85 A~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  164 (210)
                      |++|+.+|++|+||||+++++.|++.++.+||+|+.++...+..++...+.++..+.++.+|++||+||.+++.||.|++
T Consensus       103 A~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~~~~a~~~t~g  182 (344)
T 3vc3_A          103 AFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPAKGMGGTVKKAYELLENTPNAHMLQQFSNPANTQVHFETTG  182 (344)
T ss_dssp             HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEECCCTTTCHHHHHHHHHTHH
T ss_pred             HHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCCcchHHHHHHHHHHhhccCceeccccccchhHHHHHHHHH
Confidence            99999999999999999999999999999999999998755556666667777777779999999999999889999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      .||++|+++.+|+||+|+|+||+++|++.++|+.+|+++||+|-
T Consensus       183 ~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVe  226 (344)
T 3vc3_A          183 PEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVE  226 (344)
T ss_dssp             HHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEc
Confidence            99999998889999999999999999999999999999999985

>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}

Probab=100.00  E-value=6.2e-53  Score=367.64  Aligned_cols=206  Identities=65%  Similarity=1.101  Sum_probs=196.1

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      +.+++++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.+++++|.+++|..+||++|+||||+
T Consensus       109 ~~~~~~~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnptGSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~  188 (430)
T 4aec_A          109 DGLNIADNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGI  188 (430)
T ss_dssp             SSCSCBSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred             cccchhhhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCCCCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECCCHHHH
Confidence            55778899999999999999999998889999999999999999999999999999999999999888899999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|++++..|++.++.+||+|+.++...+++++.+.+++++++.++++|++||+||.+++.||.|
T Consensus       189 AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~~~~~~~a~~~a~el~~~~~~~~~i~~~~np~~~~aG~~T  268 (430)
T 4aec_A          189 GLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYET  268 (430)
T ss_dssp             HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTEEECCTTTCTHHHHHHHHT
T ss_pred             HHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECCCCChHHHHHHHHHHHHhcCCcEEecCCCCccHHHHHHHH
Confidence            99999999999999999999999999999999999999986556889999999999887789999999999998899999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      ++.||++|++++||+||+|+|+||+++|++.++|+.+|+++||||.
T Consensus       269 ~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVe  314 (430)
T 4aec_A          269 TGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVE  314 (430)
T ss_dssp             HHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             HHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence            9999999997789999999999999999999999999999999995

>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*

Probab=100.00  E-value=2.1e-52  Score=355.60  Aligned_cols=206  Identities=41%  Similarity=0.734  Sum_probs=192.5

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++.+.+++|||++++++ ...|.+||+|+|++|||||||+|++.+++.++.++|.+++|...|+++|+||||+
T Consensus         7 ~i~~~~~~i~~~ig~TPL~~l~~l-~~~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~   85 (334)
T 3tbh_A            7 KSKNVAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSIVVESSSGNTGV   85 (334)
T ss_dssp             TTTSCCSSGGGGSSCCCEEECCTT-CCSSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHH
T ss_pred             hHHHHHHHHHHhcCCCCeEECCcc-cCCCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHH
Confidence            445678899999999999999999 7788999999999999999999999999999999998888754469999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|++++..|++.++.+||+|+.++.+.+++++.+.+++++++.++++|++||+||.|+..||.|
T Consensus        86 alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~np~n~~~g~~t  165 (334)
T 3tbh_A           86 SLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVAMAKKIVAANPNAVLADQFATKYNALIHEET  165 (334)
T ss_dssp             HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCHHHHHHHHHT
T ss_pred             HHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCchHHHHHHHHHHHhCCCEEECCccCChhHHHHHHHH
Confidence            99999999999999999999999999999999999999997656889999999999888789999999999998899999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++.||++|+++.||+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus       166 ~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~  212 (334)
T 3tbh_A          166 TGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEP  212 (334)
T ss_dssp             HHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred             HHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEee
Confidence            99999999977899999999999999999999999999999999963

>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*

Probab=100.00  E-value=2.9e-52  Score=353.49  Aligned_cols=204  Identities=40%  Similarity=0.626  Sum_probs=191.8

Q ss_pred             hhhhhHhhhccccCCceeecccccCC-------CCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC
Q 028372            4 NNAIKRDVTELIGNTPMVYLNNVVDG-------CVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVT   76 (210)
Q Consensus         4 ~~~~~~~i~~~~~~TPl~~~~~l~~~-------~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~s   76 (210)
                      +|.++++|.+.+++|||++++++++.       .|.+||+|+|++|||||||+|++.+++.++.++|.++++ .+|+++|
T Consensus         2 ~~~~~~~i~~~ig~TPL~~~~~l~~~~~~~~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~l~~~-~~vv~aS   80 (325)
T 3dwg_A            2 HMTRYDSLLQALGNTPLVGLQRLSPRWDDGRDGPHVRLWAKLEDRNPTGSIKDRPAVRMIEQAEADGLLRPG-ATILEPT   80 (325)
T ss_dssp             CCCEESSTGGGCSCCCEEECTTTSSBSSCBTTBCCEEEEEEETTSSTTSBTTHHHHHHHHHHHHHTTCCCTT-CEEEEEC
T ss_pred             CcccccCHHHhcCCCCcEEccccchhhcccccCCCcEEEEEECCCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeC
Confidence            46678899999999999999999887       678999999999999999999999999999999988876 6799999


Q ss_pred             CCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhH
Q 028372           77 SGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANP  156 (210)
Q Consensus        77 sGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~  156 (210)
                      +||||+|+|++|+.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++.++++|++||+||.++
T Consensus        81 sGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~np~~~  160 (325)
T 3dwg_A           81 SGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAVATAKELAATNPSWVMLYQYGNPANT  160 (325)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTHHHHHHHHHHHHHHCTTSBCCCTTTCHHHH
T ss_pred             CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEeCCCCCCHHHH
Confidence            99999999999999999999999999999999999999999999998667899999999999988669999999999997


Q ss_pred             HHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          157 KIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       157 ~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ..||.|++.||++|+++ ||+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus       161 ~~g~~t~~~Ei~~q~~~-~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~  212 (325)
T 3dwg_A          161 DSHYCGTGPELLADLPE-ITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEP  212 (325)
T ss_dssp             HHHHHTHHHHHHHHCTT-CCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCC-CCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEee
Confidence            78999999999999964 99999999999999999999999999999999863

>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*

Probab=100.00  E-value=3.5e-52  Score=352.61  Aligned_cols=203  Identities=68%  Similarity=1.121  Sum_probs=191.7

Q ss_pred             hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      +++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|.++|+..+|+++|+||||+|+|+
T Consensus         5 ~~~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~   84 (322)
T 1z7w_A            5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAF   84 (322)
T ss_dssp             CCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHH
T ss_pred             hhhHHHHhcCCCCeEECccccccCCceEEEEecccCCCCchHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHH
Confidence            57889999999999999999988888999999999999999999999999999999998888778999999999999999


Q ss_pred             HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372           87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE  166 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  166 (210)
                      +|+.+|++|++|+|+++++.|+++++.+||+|+.++.+.+++++.+.+++++++.++++|++||+|+.|+..||.|++.|
T Consensus        85 aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~~~i~~~~n~~~~~~g~~t~~~E  164 (322)
T 1z7w_A           85 TAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPE  164 (322)
T ss_dssp             HHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHH
T ss_pred             HHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCeEeCCCCCChhHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999975457889999999999887899999999999987899999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       167 i~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      |++|++++||+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus       165 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~  207 (322)
T 1z7w_A          165 IWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP  207 (322)
T ss_dssp             HHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEec
Confidence            9999976899999999999999999999999999999999964

>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*

Probab=100.00  E-value=7.6e-51  Score=341.76  Aligned_cols=199  Identities=45%  Similarity=0.718  Sum_probs=186.2

Q ss_pred             HhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372            9 RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus         9 ~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a   88 (210)
                      +++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|.++++ .+|+++|+||||+|+|++|
T Consensus         2 ~~i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~a~A~~a   80 (303)
T 2v03_A            2 STLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIA   80 (303)
T ss_dssp             CSGGGGSSCCCEEECSSSSCSSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHHHHHH
T ss_pred             cchHhhcCCCCcEECcccccccCCEEEEEeccCCCCCCcHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcHHHHHHHHHH
Confidence            467889999999999999988889999999999999999999999999999999987776 6799999999999999999


Q ss_pred             HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHH
Q 028372           89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW  168 (210)
Q Consensus        89 ~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  168 (210)
                      +.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++.+++ |++||+||.++..||.|++.||+
T Consensus        81 ~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~n~~~~~~g~~t~~~Ei~  159 (303)
T 2v03_A           81 ALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGK-LLDQFNNPDNPYAHYTTTGPEIW  159 (303)
T ss_dssp             HHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHTTSCE-ECCTTTCTHHHHHHHHTHHHHHH
T ss_pred             HHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCc-ccCCcCChhhHHHhcCCcHHHHH
Confidence            99999999999999999999999999999999997656899999999998885577 99999999997779999999999


Q ss_pred             HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       169 ~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +|++++||+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus       160 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~  200 (303)
T 2v03_A          160 QQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  200 (303)
T ss_dssp             HHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             HHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcC
Confidence            99976799999999999999999999999999999999964

>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*

Probab=100.00  E-value=3.7e-51  Score=345.41  Aligned_cols=201  Identities=44%  Similarity=0.732  Sum_probs=186.9

Q ss_pred             hhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA   85 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA   85 (210)
                      .+++++.+.+++|||++++++ + .|.+||+|+|++|||||||+|++.+++..+.++|.++++ .+|+++|+||||+|+|
T Consensus         2 ~~~~~i~~~~~~TPL~~l~~l-~-~g~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~~~~~-~~vv~~ssGN~g~a~A   78 (316)
T 1y7l_A            2 AIYADNSYSIGNTPLVRLKHF-G-HNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALA   78 (316)
T ss_dssp             CCCSSGGGGCCCCCEEECSSS-S-STTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHH
T ss_pred             cchhhhHHhcCCCCcEECccC-C-CCCEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCcHHHHHHH
Confidence            356789999999999999999 6 788999999999999999999999999999999987776 6799999999999999


Q ss_pred             HHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCe-EEcCCCCCChhHHHHHHhHH
Q 028372           86 FIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDG-YLLRQFENPANPKIHYETTG  164 (210)
Q Consensus        86 ~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~~~~g~~t~~  164 (210)
                      ++|+.+|++|++|+|++++..|+++|+.+||+|+.++.+.+++++.+.+++++++.+++ ||++||+||.++..||.|++
T Consensus        79 ~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  158 (316)
T 1y7l_A           79 YVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTG  158 (316)
T ss_dssp             HHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHH
T ss_pred             HHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEECCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999997545888999999999887666 88999999999878999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEEEe
Q 028372          165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLRVL  209 (210)
Q Consensus       165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv~~  209 (210)
                      .||++|++++||+||+|+|+||+++|++.++|+.+ |+++||+|..
T Consensus       159 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~  204 (316)
T 1y7l_A          159 PEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEP  204 (316)
T ss_dssp             HHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEE
T ss_pred             HHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEec
Confidence            99999997669999999999999999999999998 9999999964

>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A

Probab=100.00  E-value=1.3e-50  Score=341.70  Aligned_cols=204  Identities=49%  Similarity=0.796  Sum_probs=189.6

Q ss_pred             hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHH
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGL   84 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~al   84 (210)
                      +.+++++.+.+++|||++++++++..+.+||+|+|++|||||||+|++.+++..+.++|.++++ .+|+++|+||||+|+
T Consensus         4 ~~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~al   82 (313)
T 2q3b_A            4 MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPD-TIILEPTSGNTGIAL   82 (313)
T ss_dssp             CCCCSSGGGGSCCCCEEECSSSCTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECSSHHHHHH
T ss_pred             cchhhhHHHhcCCCceEECcccccccCcEEEEEehhcCCCCcHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHH
Confidence            4567889999999999999999888889999999999999999999999999999999987776 579999999999999


Q ss_pred             HHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372           85 AFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG  164 (210)
Q Consensus        85 A~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  164 (210)
                      |++|+.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++.+..++++||+||.++..||.|++
T Consensus        83 A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~  162 (313)
T 2q3b_A           83 AMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTA  162 (313)
T ss_dssp             HHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHH
T ss_pred             HHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHH
Confidence            99999999999999999999999999999999999999755588999999999998855588999999999767899999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      .||++|+++++|+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus       163 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~  207 (313)
T 2q3b_A          163 EEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEP  207 (313)
T ss_dssp             HHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEee
Confidence            999999976799999999999999999999999999999999964

>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*

Probab=100.00  E-value=2.1e-50  Score=344.40  Aligned_cols=204  Identities=39%  Similarity=0.651  Sum_probs=189.1

Q ss_pred             hhhhhHhhhccccCCceeecccccC----CCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCc
Q 028372            4 NNAIKRDVTELIGNTPMVYLNNVVD----GCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGN   79 (210)
Q Consensus         4 ~~~~~~~i~~~~~~TPl~~~~~l~~----~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN   79 (210)
                      ...+++++...+++|||++++++++    ..|.+||+|+|++|||||||+|++.+++..+.++|.++++ .+|+++|+||
T Consensus        10 ~~~~~~~i~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~ptGSfKdR~a~~~l~~a~~~g~~~~g-~~vv~aSsGN   88 (343)
T 2pqm_A           10 RKRIYHNILETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNPMSSVKDRVGFNIVYQAIKDGRLKPG-MEIIESTSGN   88 (343)
T ss_dssp             CCCEESSGGGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTSSCTT-CEEEEECSSH
T ss_pred             chhHHHHHHhhcCCCCeEECCccccccccccCcEEEEEeccCCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEECCcH
Confidence            3456788999999999999999987    7788999999999999999999999999999999987776 5799999999


Q ss_pred             hHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCe-EEcCCCCCChhHHH
Q 028372           80 TGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDG-YLLRQFENPANPKI  158 (210)
Q Consensus        80 ~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~n~~~~~~  158 (210)
                      ||+|+|++|+.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++.+.. |+++||+||.|++.
T Consensus        89 ~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~n~~n~~~  168 (343)
T 2pqm_A           89 TGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKGMPGAIEEVNKMIKENPGKYFVANQFGNPDNTAA  168 (343)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHSTTTEEECCTTTCHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHhCCCcEEECCCCCChhHHHH
Confidence            99999999999999999999999999999999999999999997545888999999999887665 78899999999888


Q ss_pred             HHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          159 HYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       159 g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ||.|++ ||++|++++||+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus       169 g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~  218 (343)
T 2pqm_A          169 HHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEP  218 (343)
T ss_dssp             HHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEec
Confidence            999999 99999976799999999999999999999999999999999964

>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}

Probab=100.00  E-value=1.4e-50  Score=340.72  Aligned_cols=201  Identities=50%  Similarity=0.784  Sum_probs=174.1

Q ss_pred             hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      +++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++..+.++|.++++ .+|+++|+||||+|+|+
T Consensus         4 ~~~~i~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfK~R~a~~~l~~a~~~g~~~~g-~~vv~assGN~g~a~A~   82 (308)
T 2egu_A            4 TVNSITELIGDTPAVKLNRIVDEDSADVYLKLEFMNPGSSVKDRIALAMIEAAEKAGKLKPG-DTIVEPTSGNTGIGLAM   82 (308)
T ss_dssp             CCSCGGGGSSCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTCCCTT-CEEEEECCHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCeEECCcccccCCCEEEEEecccCCCCChHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHHHHH
Confidence            46788999999999999999888889999999999999999999999999999999987776 57999999999999999


Q ss_pred             HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372           87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE  166 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  166 (210)
                      +|+.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++. ++++++||+||.++..||.|++.|
T Consensus        83 ~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~l~~~~-~~~~~~~~~n~~~~~~g~~t~~~E  161 (308)
T 2egu_A           83 VAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGAQGMRGAIAKAEELVREH-GYFMPQQFKNEANPEIHRLTTGKE  161 (308)
T ss_dssp             HHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCC--------------CHHHH
T ss_pred             HHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHHC-cCCcCCcCCChhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999997545788999999998887 458889999999877899999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       167 i~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      |++|++++||+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus       162 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~  204 (308)
T 2egu_A          162 IVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEP  204 (308)
T ss_dssp             HHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEe
Confidence            9999976799999999999999999999999999999999864

>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*

Probab=100.00  E-value=5.6e-50  Score=336.55  Aligned_cols=197  Identities=48%  Similarity=0.807  Sum_probs=183.2

Q ss_pred             hhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCe--EEEeeCCCchHHHHHHHH
Q 028372           11 VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKT--TLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus        11 i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~--~vv~~ssGN~g~alA~~a   88 (210)
                      |.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|.++++ +  +|+++|+||||+|+|++|
T Consensus         3 i~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~g-~~~~vv~assGN~g~a~A~~a   81 (304)
T 1ve1_A            3 VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPG-SGQVIVEPTSGNTGIGLAMIA   81 (304)
T ss_dssp             GGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTT-SCCEEEESCCSHHHHHHHHHH
T ss_pred             hHHhcCCCCcEECcccccccCCEEEEEecccCCCCcHHHHHHHHHHHHHHHcCCCCCC-CccEEEEeCCcHHHHHHHHHH
Confidence            5678999999999999988889999999999999999999999999999999987776 4  799999999999999999


Q ss_pred             HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHH
Q 028372           89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW  168 (210)
Q Consensus        89 ~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  168 (210)
                      +.+|++|++|+|++++..|+++++.+||+|+.++.+.+++++.+.+++++++ ++++|++||+||.++..||.|++.||+
T Consensus        82 ~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~~~~~~~a~~l~~~-~~~~~~~~~~n~~~~~g~~~t~~~Ei~  160 (304)
T 1ve1_A           82 ASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEE-LGAFMPDQFKNPANVRAHYETTGPELY  160 (304)
T ss_dssp             HHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH-HTCBCCCTTTCHHHHHHHHHTHHHHHH
T ss_pred             HHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHhc-CCCEeCCCCCChhHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999765588999999999887 478999999999996556899999999


Q ss_pred             HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       169 ~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +|+++++|+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus       161 ~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~  201 (304)
T 1ve1_A          161 EALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEP  201 (304)
T ss_dssp             HHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred             HHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEec
Confidence            99976799999999999999999999999999999999964

>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*

Probab=100.00  E-value=9.9e-50  Score=340.58  Aligned_cols=201  Identities=22%  Similarity=0.292  Sum_probs=182.5

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++.+.+++|||+++++|++..|.+||+|+|++|||||||+|++.+++.++.++|..+. .++|+++|+||||+
T Consensus        11 ~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~-~~~vv~~SsGNhg~   89 (346)
T 3l6b_A           11 DVEKAHINIRDSIHLTPVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERK-PKAVVTHSSGNHGQ   89 (346)
T ss_dssp             HHHHHHHHHGGGSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHHTTC-----CC-CSCEEEECSSHHHH
T ss_pred             HHHHHHHHHhcccCCCCeEEchhhHHHhCCeEEEEeCCCCCCCCcHHHHHHHHHHHHHHhccccC-CCEEEEeCCCHHHH
Confidence            45678999999999999999999988888999999999999999999999999999988764433 25699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|++++..|++.++.+||+|+.++++  ++++.+.+++++++. +++|++||+||.+ +.||.|
T Consensus        90 a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~l~~~~-~~~~i~~~~np~~-~~g~~t  165 (346)
T 3l6b_A           90 ALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPS--DESRENVAKRVTEET-EGIMVHPNQEPAV-IAGQGT  165 (346)
T ss_dssp             HHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSS--HHHHHHHHHHHHHHH-TCEECCSSSCHHH-HHHHHH
T ss_pred             HHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhc-CCEEECCCCChHH-HHHHHH
Confidence            999999999999999999999999999999999999999864  788999999998887 6899999999997 789999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++.||++|+ +.+|+||+|+||||+++|++.++|+.+|+++||||..
T Consensus       166 ~~~Ei~~q~-~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~  211 (346)
T 3l6b_A          166 IALEVLNQV-PLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEP  211 (346)
T ss_dssp             HHHHHHHHS-TTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred             HHHHHHHhC-CCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEec
Confidence            999999999 5799999999999999999999999999999999963

>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*

Probab=100.00  E-value=5e-49  Score=344.28  Aligned_cols=203  Identities=44%  Similarity=0.663  Sum_probs=183.0

Q ss_pred             hhhHhhhccccCCceeecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG   83 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~a   83 (210)
                      .+++++.+.+++|||+++++|++.+|  .+||+|+|++|||||||+|++.+++.++.++|.++++ .+||++|+||||+|
T Consensus        97 ~~~~~i~~~ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~nptGSfKdR~a~~~i~~a~~~G~l~~g-~tVV~aSsGN~G~A  175 (435)
T 1jbq_A           97 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPG-DTIIEPTSGNTGIG  175 (435)
T ss_dssp             SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTT-CEEEEECSSHHHHH
T ss_pred             hHHHHHHhhCCCCCeEECcchhhHhCCCceEEEEECCCCCcCCHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHHH
Confidence            35677899999999999999887766  6999999999999999999999999999999988876 67999999999999


Q ss_pred             HHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHH---HHHHHHHHHHhCCCeEEcCCCCCChhHHHHH
Q 028372           84 LAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEE---ILEKGEEILKKTPDGYLLRQFENPANPKIHY  160 (210)
Q Consensus        84 lA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~---~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~  160 (210)
                      +|++|+.+|++|++|||++++..|+++++.+||+|+.++.+.++++   ..+.+++++++.++.||++||+|+.|+..||
T Consensus       176 lA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~~~~~d~~~~~~~~a~~la~~~~~~~~i~q~~n~~n~~ag~  255 (435)
T 1jbq_A          176 LALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY  255 (435)
T ss_dssp             HHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHH
T ss_pred             HHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecCCCCcchHHHHHHHHHHHHHhcCCeEEeCccCCcccHHHHH
Confidence            9999999999999999999999999999999999999986444554   4567888888877889999999999989999


Q ss_pred             HhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          161 ETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       161 ~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      .|++.||++|+++++|+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus       256 ~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep  304 (435)
T 1jbq_A          256 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP  304 (435)
T ss_dssp             HTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEec
Confidence            9999999999976799999999999999999999999999999999964

>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*

Probab=100.00  E-value=9.6e-49  Score=328.97  Aligned_cols=194  Identities=45%  Similarity=0.675  Sum_probs=178.7

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      +..+.+.+++|||+++++++    .+||+|+|++|||||||+|++.+++..+.++|.+++   .|+++|+||||+|+|++
T Consensus        11 ~~~~~~~~~~TPL~~l~~l~----~~v~~K~E~~~ptGSfK~R~a~~~l~~a~~~g~~~~---~vv~aSsGN~g~a~A~a   83 (303)
T 1o58_A           11 HHMMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKN---GIVEPTSGNMGIAIAMI   83 (303)
T ss_dssp             CCHHHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCTT---CEEEECSSHHHHHHHHH
T ss_pred             hhhhhhccCCCCeEECccCC----ceEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCCC---CEEEECchHHHHHHHHH
Confidence            44578889999999999886    589999999999999999999999999999887554   39999999999999999


Q ss_pred             HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372           88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI  167 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  167 (210)
                      |+.+|++|++|+|+++++.|+++++.+||+|+.++++.+++++.+.+++++++. +++|++||+||.++..||.|++.||
T Consensus        84 a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~~~~g~~t~~~Ei  162 (303)
T 1o58_A           84 GAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEI  162 (303)
T ss_dssp             HHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHH
T ss_pred             HHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhc-CeEeCCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999997545889999999998887 6888999999999878999999999


Q ss_pred             HHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCC-CEEEEEEe
Q 028372          168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPD-IKVVLRVL  209 (210)
Q Consensus       168 ~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~-~~vigv~~  209 (210)
                      ++|+++.||+||+|+|+||+++|++.++|+.+|+ ++||+|..
T Consensus       163 ~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~  205 (303)
T 1o58_A          163 LKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEP  205 (303)
T ss_dssp             HHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEE
T ss_pred             HHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEec
Confidence            9999766999999999999999999999999999 99999964

>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*

Probab=100.00  E-value=1.9e-48  Score=349.19  Aligned_cols=204  Identities=41%  Similarity=0.662  Sum_probs=188.2

Q ss_pred             hhhhHhhhccccCCceeecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ..+++.+.+.+++|||++++++++.+|  ++||+|+|++|||||||+|++.+++.+++++|.+++| .+|+++|+||||+
T Consensus        48 ~~~~~~i~~~ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~ptGS~K~R~a~~~i~~a~~~g~~~~g-~~vv~~ssGN~g~  126 (527)
T 3pc3_A           48 QQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPG-YTIIEPTSGNTGI  126 (527)
T ss_dssp             CSSCSSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHHTCCCTT-CEEEEECSSHHHH
T ss_pred             hhHHhhHHhhcCCCCcEEcchhhhhcCCCcEEEEEeccCCCCCCHHHHHHHHHHHHHHHcCCCCCC-CEEEEeCCCHHHH
Confidence            456788999999999999999987666  7999999999999999999999999999999998887 6799999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHH---HHHHHHHHHHHhCCCeEEcCCCCCChhHHHH
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE---EILEKGEEILKKTPDGYLLRQFENPANPKIH  159 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g  159 (210)
                      |+|++|+.+|++|++|+|++++..|++.++.+||+|+.++.+.+++   .+.+.+++++++.++.+|++||+||.|+..|
T Consensus       127 a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~n~~~g  206 (527)
T 3pc3_A          127 GLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNSIVLDQYRNAGNPLAH  206 (527)
T ss_dssp             HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTSCTTSTTSHHHHHHHHHHHSSSEECCCTTTCTHHHHHH
T ss_pred             HHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCCCCCcccHHHHHHHHHHHHHhCCCcEecCCCCCcchHHHH
Confidence            9999999999999999999999999999999999999998753444   3667888998888788999999999998999


Q ss_pred             HHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          160 YETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       160 ~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      |.|++.||++|+++.||+||+|+|+||+++|++.++|+.+|+++||||..
T Consensus       207 ~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~  256 (527)
T 3pc3_A          207 YDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDP  256 (527)
T ss_dssp             HHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred             HHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEec
Confidence            99999999999977899999999999999999999999999999999863

>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*

Probab=100.00  E-value=2.3e-48  Score=334.12  Aligned_cols=193  Identities=21%  Similarity=0.228  Sum_probs=177.6

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      +.+....+++|||+++++|++..|.+||+|+|++|||||||+|++.+++..+.++|.     ++|+++|+||||+|+|++
T Consensus        37 ~~~~~~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~-----~~vv~aSsGN~g~alA~a  111 (364)
T 4h27_A           37 MMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSSGNAGMAAAYA  111 (364)
T ss_dssp             ----CCSSCCCCEEEEHHHHHHHTSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHH
T ss_pred             hhhcCCCCCcCCeEEChhhHHHhCCEEEEEeCCCCCCCCHHHHHHHHHHHHHHhcCC-----CEEEEeCCChHHHHHHHH
Confidence            445567789999999999988888899999999999999999999999999998775     789999999999999999


Q ss_pred             HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372           88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI  167 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  167 (210)
                      |+.+|++|++|+|++++..|+++++.+||+|+.++.  +++++.+.+++++++.++++|++||+||.+ ..||.|++.||
T Consensus       112 a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~l~~~~~~~~~~~~~~np~~-~~G~~t~~~Ei  188 (364)
T 4h27_A          112 ARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKEL  188 (364)
T ss_dssp             HHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECS--STTHHHHHHHHHHHHSTTEEEECSSCSHHH-HHHHTHHHHHH
T ss_pred             HHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHhCCCeEEeCCCCCHHH-HHHHHHHHHHH
Confidence            999999999999999999999999999999999985  478999999999998778999999999998 68999999999


Q ss_pred             HHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEEE
Q 028372          168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLRV  208 (210)
Q Consensus       168 ~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv~  208 (210)
                      ++|+++.||+||+|+|+||+++|++.++|+.+ |+++||+|.
T Consensus       189 ~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe  230 (364)
T 4h27_A          189 KETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAME  230 (364)
T ss_dssp             HHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEE
T ss_pred             HHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEe
Confidence            99997679999999999999999999999886 899999985

>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*

Probab=100.00  E-value=6.5e-48  Score=332.15  Aligned_cols=196  Identities=20%  Similarity=0.215  Sum_probs=178.3

Q ss_pred             hhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA   85 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA   85 (210)
                      ..++++...+++|||+++++|++..|.+||+|+|++|||||||+|++.+++..+.++|.     .+||++|+||||+|+|
T Consensus        35 ~~~p~~~~~~~~TPL~~l~~l~~~~g~~i~~K~E~~~ptGSfKdRga~~~l~~a~~~g~-----~~vv~aSsGN~g~alA  109 (372)
T 1p5j_A           35 EFMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSAGNAGMAAA  109 (372)
T ss_dssp             -----CCCSSCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHH
T ss_pred             HhcccccCCCCCCCceEcHhhHHHhCCEEEEEEcCCCCCCChHHHHHHHHHHHHHHcCC-----CEEEEeCCCHHHHHHH
Confidence            45566778899999999999887778899999999999999999999999999988763     7899999999999999


Q ss_pred             HHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHH
Q 028372           86 FIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGP  165 (210)
Q Consensus        86 ~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  165 (210)
                      ++|+.+|++|++|+|+++++.|+++++.+||+|+.+++  +++++.+.+++++++.++++|++||+||.+ ..||.|++.
T Consensus       110 ~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~--~~~~a~~~a~~l~~~~~~~~~v~~~~n~~~-~~G~~t~~~  186 (372)
T 1p5j_A          110 YAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVK  186 (372)
T ss_dssp             HHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--CHHHHHHHHHHHHHHSTTEEECCSSCCHHH-HHHHTHHHH
T ss_pred             HHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhcCCcEEeCCCCCHHH-HhhHHHHHH
Confidence            99999999999999999999999999999999999986  489999999999988668999999999998 688899999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEEEe
Q 028372          166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLRVL  209 (210)
Q Consensus       166 Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv~~  209 (210)
                      ||++|+++.||+||+|+|+||+++|++.++|+.+ |+++||+|..
T Consensus       187 Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~  231 (372)
T 1p5j_A          187 ELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMET  231 (372)
T ss_dssp             HHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEE
T ss_pred             HHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEec
Confidence            9999997679999999999999999999999986 9999999864

>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1

Probab=100.00  E-value=1.4e-48  Score=328.86  Aligned_cols=196  Identities=25%  Similarity=0.291  Sum_probs=178.7

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++.+.+++|||++++++++..|.+||+|+|++|||||||||++.+++.++.  +     ..+|+++|+||||+
T Consensus         6 ~i~~a~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~i~~l~--~-----~~~vv~~ssGN~g~   78 (311)
T 1ve5_A            6 DLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE--N-----PKGLLAVSSGNHAQ   78 (311)
T ss_dssp             HHHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSS--S-----CCCEEEECSSHHHH
T ss_pred             HHHHHHHHHhccCCCCCceechhhHHhhCCeEEEEecCCCCcCCcHHHHHHHHHHHhc--C-----CCeEEEECCCcHHH
Confidence            4567899999999999999999888777889999999999999999999999999876  2     25699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|++++..|+++++.+||+|+.++++  ++++.+.+++++++. +++|++||+|+.+ ..||.|
T Consensus        79 alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t  154 (311)
T 1ve5_A           79 GVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEVARALQEET-GYALIHPFDDPLV-IAGQGT  154 (311)
T ss_dssp             HHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTCC--TTTHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHHH
T ss_pred             HHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCCCCCcch-hhhccH
Confidence            999999999999999999999999999999999999998864  678888888888876 7899999999998 679999


Q ss_pred             HHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++.||++|++   +.+|+||+|+|+||+++|++.++|+.+|+++||+|..
T Consensus       155 ~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~  204 (311)
T 1ve5_A          155 AGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEP  204 (311)
T ss_dssp             HHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred             HHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEe
Confidence            9999999995   6799999999999999999999999999999999964

>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*

Probab=100.00  E-value=1.1e-48  Score=331.20  Aligned_cols=198  Identities=19%  Similarity=0.295  Sum_probs=178.6

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..+++++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++..+.++.    +.++|+++|+||||+
T Consensus        12 ~i~~a~~~i~~~i~~TPL~~~~~l~~~~g~~i~~K~E~~~ptGS~KdRga~~~i~~~~~~~----~~~~vv~~ssGN~g~   87 (323)
T 1v71_A           12 DVASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQ----RKAGVLTFSSGNHAQ   87 (323)
T ss_dssp             HHHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHH----HHHCEEECCSSHHHH
T ss_pred             HHHHHHHHHhccCCCCCceEhHhhHHHhCCeEEEEecCCCCcCCHHHHHHHHHHHHHHHhc----CCCeEEEeCCCcHHH
Confidence            4457889999999999999999888777889999999999999999999999998654321    126799999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |+|++|+.+|++|++|+|++.+..|++.++.+||+|+.++++  ++++.+.+++++++. +++|++||+||.+ ..||.|
T Consensus        88 alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~l~~~~-~~~~i~~~~n~~~-~~g~~t  163 (323)
T 1v71_A           88 AIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHV-LAGQGT  163 (323)
T ss_dssp             HHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHH-HHHHTH
T ss_pred             HHHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CCEecCCCCCcch-hhhHhH
Confidence            999999999999999999999999999999999999999975  566788888888776 6788999999998 689999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ++.||++|++ .+|+||+|+||||+++|++.++|+.+|+++||||..
T Consensus       164 ~~~Ei~~q~~-~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~  209 (323)
T 1v71_A          164 AAKELFEEVG-PLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEP  209 (323)
T ss_dssp             HHHHHHHHHC-CCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HHHHHHHhcC-CCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            9999999995 799999999999999999999999999999999964

>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.3e-47  Score=321.51  Aligned_cols=188  Identities=21%  Similarity=0.232  Sum_probs=174.2

Q ss_pred             ccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcC
Q 028372           13 ELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARG   92 (210)
Q Consensus        13 ~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g   92 (210)
                      ..+.+|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|.     .+|+++|+||||+|+|++|+.+|
T Consensus         3 ~~~~~TPL~~~~~l~~~~g~~v~~K~E~~~ptgS~K~R~a~~~l~~a~~~g~-----~~vv~~ssGN~g~alA~~a~~~G   77 (318)
T 2rkb_A            3 PFHVVTPLLESWALSQVAGMPVFLKCENVQPSGSFKIRGIGHFCQEMAKKGC-----RHLVCSSGGNAGIAAAYAARKLG   77 (318)
T ss_dssp             CSSCCCCEEEEHHHHHHHTSCEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCCSHHHHHHHHHHHHHT
T ss_pred             CCCccCCceehHhhHHHhCCeEEEEecCCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEECCchHHHHHHHHHHHcC
Confidence            3568999999999887777899999999999999999999999999988763     78999999999999999999999


Q ss_pred             CcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhC
Q 028372           93 YNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSG  172 (210)
Q Consensus        93 ~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~  172 (210)
                      ++|++|+|+++++.|+++|+.+||+|+.+++  +++++.+.+++++++. +++|++||+|+.+ ..||.|++.||++|++
T Consensus        78 ~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~--~~~~~~~~a~~~~~~~-~~~~~~~~~n~~~-~~g~~t~~~Ei~~q~~  153 (318)
T 2rkb_A           78 IPATIVLPESTSLQVVQRLQGEGAEVQLTGK--VWDEANLRAQELAKRD-GWENVPPFDHPLI-WKGHASLVQELKAVLR  153 (318)
T ss_dssp             CCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHST-TEEECCSSCSHHH-HHHHHHHHHHHHHHSS
T ss_pred             CCEEEEECCCCcHHHHHHHHhcCCEEEEECC--CHHHHHHHHHHHHHhc-CCEEeCCCCChhh-ccchhHHHHHHHHhcC
Confidence            9999999999999999999999999999986  4899999999998875 8999999999998 6788999999999997


Q ss_pred             CCCCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEEEe
Q 028372          173 GKVDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLRVL  209 (210)
Q Consensus       173 ~~~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv~~  209 (210)
                      ..||+||+|+|+||+++|++.++|+.+ |+++||+|..
T Consensus       154 ~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~  191 (318)
T 2rkb_A          154 TPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMET  191 (318)
T ss_dssp             SCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEE
T ss_pred             CCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEec
Confidence            679999999999999999999999885 8999999864

>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2

Probab=100.00  E-value=2.2e-47  Score=338.60  Aligned_cols=191  Identities=26%  Similarity=0.358  Sum_probs=177.6

Q ss_pred             hhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372           10 DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA   89 (210)
Q Consensus        10 ~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~   89 (210)
                      ++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++..+.+++.    .++||++|+||||+|+|++|+
T Consensus        24 ~i~~~i~~TPL~~l~~Ls~~~g~~V~lK~E~lqPtgSfKdRgA~n~i~~l~~~~~----~~gVV~aSsGNhg~avA~aa~   99 (514)
T 1tdj_A           24 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA   99 (514)
T ss_dssp             CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred             hHhcccCCCCcEEchhhHHhhCCeEEEEECCCCCcccHHHHHHHHHHHHHHHhcC----CCEEEEECCcHHHHHHHHHHH
Confidence            6788999999999999988888999999999999999999999999998765442    356999999999999999999


Q ss_pred             HcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHH
Q 028372           90 ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ  169 (210)
Q Consensus        90 ~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  169 (210)
                      .+|++|++|||.+++..|+++++.+||+|+.++.  +++++.+.+++++++. +++|++||+||.+ ++||+|++.||++
T Consensus       100 ~lGi~~~IvmP~~~p~~Kv~~~r~~GAeVvlv~~--~~dda~~~a~ela~e~-g~~~v~pfdnp~~-iaGqgTig~EI~e  175 (514)
T 1tdj_A          100 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHGA--NFDEAKAKAIELSQQQ-GFTWVPPFDHPMV-IAGQGTLALELLQ  175 (514)
T ss_dssp             HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCS--SHHHHHHHHHHHHHHH-CCEECCSSCCHHH-HHHHHHHHHHHHH
T ss_pred             HcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhc-CCEeeCCCCCHHH-HHHHHHHHHHHHH
Confidence            9999999999999999999999999999999885  5899999999998886 7899999999998 6899999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          170 DSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       170 q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      |+++ +|+||+|+||||+++|++.++|+.+|+++||||..
T Consensus       176 Ql~~-~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep  214 (514)
T 1tdj_A          176 QDAH-LDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA  214 (514)
T ss_dssp             HCTT-CCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             HCCC-CCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEec
Confidence            9954 99999999999999999999999999999999964

>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A

Probab=100.00  E-value=4.1e-46  Score=318.77  Aligned_cols=192  Identities=21%  Similarity=0.231  Sum_probs=176.8

Q ss_pred             hHhhhccccCCceeec--ccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372            8 KRDVTELIGNTPMVYL--NNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA   85 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~--~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA   85 (210)
                      .+++.+.+++|||+++  +++++..|.+||+|+|++|||||||+|++.+++.++.++|.     .+|+++|+||||+|+|
T Consensus        19 ~~~v~~~~g~TPL~~~~~~~l~~~~g~~v~~K~E~~~ptgS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA   93 (351)
T 3aey_A           19 TPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVACASTGNTAASAA   93 (351)
T ss_dssp             SCCCCSCCCCCCEEECCCCHHHHTTTCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEESCSSHHHHHHH
T ss_pred             CCceecCCCCCCeeecCchhhHHHhCCeEEEEecCCCCcccHHHHHHHHHHHHHHhcCC-----CEEEEeCCCHHHHHHH
Confidence            3578999999999999  88887788899999999999999999999999999998875     7899999999999999


Q ss_pred             HHHHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372           86 FIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG  164 (210)
Q Consensus        86 ~~a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  164 (210)
                      ++|+.+|++|++|+|++ ++..|+++|+.+||+|+.++++  ++++.+.+++++++. +++|+++ +|+.+ ..||.|++
T Consensus        94 ~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~--~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~  168 (351)
T 3aey_A           94 AYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGN--FDDALRLTQKLTEAF-PVALVNS-VNPHR-LEGQKTLA  168 (351)
T ss_dssp             HHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-SEEECST-TCHHH-HHHHHHHH
T ss_pred             HHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CcEecCC-CCccc-eeeeeeHH
Confidence            99999999999999998 9999999999999999999964  889999999998887 5888888 88988 68999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CCEEEEEEe
Q 028372          165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP------DIKVVLRVL  209 (210)
Q Consensus       165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~------~~~vigv~~  209 (210)
                      .||++|++..||+||+|+|+||+++|++.++|+.+|      .++||+|..
T Consensus       169 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~  219 (351)
T 3aey_A          169 FEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQA  219 (351)
T ss_dssp             HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHHTSCSSCCEEEEEEE
T ss_pred             HHHHHHcCCCCCEEEEecCchHHHHHHHHHHHHHHhccccCCCCeEEEEec
Confidence            999999976799999999999999999999998754      789999864

>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.4e-46  Score=320.31  Aligned_cols=193  Identities=25%  Similarity=0.276  Sum_probs=177.3

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      .+++.+.+++|||++++++++..|.+||+|+|++|||||||+|++.+++.++.++|.     .+|+++|+||||+|+|++
T Consensus        29 ~~~v~~~~g~TPL~~~~~l~~~~g~~i~~K~E~~~ptgSfKdR~a~~~l~~a~~~g~-----~~vv~aSsGN~g~alA~~  103 (360)
T 2d1f_A           29 WTPVTLLEGGTPLIAATNLSKQTGCTIHLKVEGLNPTGSFKDRGMTMAVTDALAHGQ-----RAVLCASTGNTSASAAAY  103 (360)
T ss_dssp             CCCCCCCCCCCCEEECHHHHHHHSSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----SEEEECCSSHHHHHHHHH
T ss_pred             CCccccccCCCCCeechhhHHHhCCeEEEEECCCCCCcCHHHHHHHHHHHHHHHCCC-----CEEEEeCCcHHHHHHHHH
Confidence            356888999999999999987778899999999999999999999999999998875     789999999999999999


Q ss_pred             HHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372           88 AAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE  166 (210)
Q Consensus        88 a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  166 (210)
                      |+.+|++|++|+|++ ++..|+++++.+||+|+.++++  ++++.+.+++++++.++.+|+++ +|+.+ ..||.|++.|
T Consensus       104 a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~--~~~~~~~a~~l~~~~~~~~~i~~-~n~~~-~~g~~t~~~E  179 (360)
T 2d1f_A          104 AARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDGN--FDDCLELARKMAADFPTISLVNS-VNPVR-IEGQKTAAFE  179 (360)
T ss_dssp             HHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSSC--HHHHHHHHHHHHHHCTTEEECST-TCHHH-HHHHTHHHHH
T ss_pred             HHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhcCCeEEcCC-CChhh-hhhHHHHHHH
Confidence            999999999999998 9999999999999999999964  89999999999988855889988 88988 6799999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CCEEEEEEe
Q 028372          167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP------DIKVVLRVL  209 (210)
Q Consensus       167 i~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~------~~~vigv~~  209 (210)
                      |++|++..||+||+|+|+||+++|++.++|+.+|      .++||+|..
T Consensus       180 i~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~  228 (360)
T 2d1f_A          180 IVDVLGTAPDVHALPVGNAGNITAYWKGYTEYHQLGLIDKLPRMLGTQA  228 (360)
T ss_dssp             HHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEE
T ss_pred             HHHHcCCCCCEEEEeCCchHHHHHHHHHHHHHHhccccccCceEEEEec
Confidence            9999976799999999999999999999998754      689999863

>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}

Probab=100.00  E-value=8.9e-47  Score=324.55  Aligned_cols=192  Identities=24%  Similarity=0.335  Sum_probs=176.6

Q ss_pred             HhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHH
Q 028372            9 RDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus         9 ~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a   88 (210)
                      +++.+.+++|||++++++++.+|.+||+|+|++|||||||||++.+++.++.+++.    ..+|+++|+||||+|+|++|
T Consensus        52 ~~i~~~i~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~~~~----~~~vv~assGN~g~a~A~aa  127 (366)
T 3iau_A           52 SPVYDVAIESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREEL----DKGVITASAGNHAQGVALAG  127 (366)
T ss_dssp             CCGGGTCCCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCHHHH----HHCEEEECSSHHHHHHHHHH
T ss_pred             HHHhhhcCCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHH
Confidence            35678899999999999988888899999999999999999999999987643321    25699999999999999999


Q ss_pred             HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHH
Q 028372           89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW  168 (210)
Q Consensus        89 ~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  168 (210)
                      +.+|++|++|+|++++..|+++++.+||+|+.+++  +++++++.+++++++. +++|++||+|+.+ +.||.|++.||+
T Consensus       128 ~~~G~~~~iv~P~~~~~~k~~~~~~~GA~V~~v~~--~~~~~~~~a~~~~~~~-~~~~i~~~~n~~~-i~g~~t~~~Ei~  203 (366)
T 3iau_A          128 QRLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGK--TFDEAQTHALELSEKD-GLKYIPPFDDPGV-IKGQGTIGTEIN  203 (366)
T ss_dssp             HHTTCCEEEEECTTCCHHHHHHHHHTTCEEEECCS--SHHHHHHHHHHHHHHH-TCEECCSSSSHHH-HHHHHHHHHHHH
T ss_pred             HHhCCceEEEeCCCCCHHHHHHHHHCCCeEEEECc--CHHHHHHHHHHHHHhc-CCEecCCCCChHH-HHHHHHHHHHHH
Confidence            99999999999999999999999999999999984  5899999999998887 7999999999998 689999999999


Q ss_pred             HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       169 ~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +|+ +.+|+||+|+|+||+++|++.++|+.+|++++|+|..
T Consensus       204 ~q~-~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~  243 (366)
T 3iau_A          204 RQL-KDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEP  243 (366)
T ss_dssp             HHC-CSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred             Hhc-CCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEee
Confidence            999 6899999999999999999999999999999999863

>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}

Probab=100.00  E-value=4.4e-46  Score=318.69  Aligned_cols=192  Identities=22%  Similarity=0.236  Sum_probs=176.5

Q ss_pred             hHhhhccccCCceeecccccCCCCce--EEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVAR--IAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA   85 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~--i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA   85 (210)
                      .+++.+.+++|||++++++++..|.+  ||+|+|++|||||||+|++.+++.++.++|.     .+|+++|+||||+|+|
T Consensus        21 ~~~v~~~~g~TPL~~~~~l~~~~g~~~~i~~K~E~~~ptGS~KdR~a~~~l~~a~~~g~-----~~vv~~SsGN~g~alA   95 (352)
T 2zsj_A           21 TPIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPTGSFKDRGMTLAISKAVEAGK-----RAVICASTGNTSASAA   95 (352)
T ss_dssp             CCCCCCCCCCCCEEECHHHHHHHTCCSEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHH
T ss_pred             CCceecccCCCCCeehHHHHHHhCCCceEEEEECCCCCCccHHHHHHHHHHHHHHhcCC-----CEEEEeCCchHHHHHH
Confidence            46788999999999999988777777  9999999999999999999999999998875     7899999999999999


Q ss_pred             HHHHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372           86 FIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG  164 (210)
Q Consensus        86 ~~a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  164 (210)
                      ++|+.+|++|++|+|++ ++..|+++++.+||+|+.+++  +++++.+.+++++++. +++|+++ +|+.+ ..||.|++
T Consensus        96 ~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~--~~~~~~~~a~~l~~~~-~~~~~~~-~n~~~-~~g~~t~~  170 (352)
T 2zsj_A           96 AYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQG--TFDDALNIVRKIGENF-PVEIVNS-VNPYR-IEGQKTAA  170 (352)
T ss_dssp             HHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHHS-SEEECST-TCTHH-HHHHTHHH
T ss_pred             HHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CcEECCC-CCcch-hhhHhHHH
Confidence            99999999999999998 999999999999999999996  4899999999998887 5888887 89998 68999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC------CCEEEEEEe
Q 028372          165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP------DIKVVLRVL  209 (210)
Q Consensus       165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~------~~~vigv~~  209 (210)
                      .||++|++..||+||+|+|+||+++|++.++|+.+|      .++||+|..
T Consensus       171 ~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~G~~~~~~~vigve~  221 (352)
T 2zsj_A          171 FEICDTLGEAPDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQA  221 (352)
T ss_dssp             HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEEE
T ss_pred             HHHHHHcCCCCCEEEEeCCCcHHHHHHHHHHHHHHhcCCCCCCCEEEEEec
Confidence            999999976799999999999999999999998754      689999864

>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*

Probab=100.00  E-value=8e-46  Score=313.95  Aligned_cols=199  Identities=23%  Similarity=0.220  Sum_probs=177.7

Q ss_pred             hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEee--CCCch
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEP--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEV--TSGNT   80 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~--ssGN~   80 (210)
                      +..++++.+.+++|||++++++++..|.+||+|+|++||  +||||+|.+.+++.+++++|.     ++||++  |+|||
T Consensus         9 l~~~~~i~~~~~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~-----~~vv~~G~ssGN~   83 (325)
T 1j0a_A            9 LAKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGA-----DVVITVGAVHSNH   83 (325)
T ss_dssp             HTTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTC-----SEEEEECCTTCHH
T ss_pred             hccCCCcccccCCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcchHH
Confidence            356778999999999999998887778899999999999  999999999999999999885     678886  99999


Q ss_pred             HHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCCCCH---HHHHHHHHHHHHhCCCe-EEcCCCCCChh
Q 028372           81 GVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSALRF---EEILEKGEEILKKTPDG-YLLRQFENPAN  155 (210)
Q Consensus        81 g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~~~~---~~~~~~a~~~~~~~~~~-~~~~~~~n~~~  155 (210)
                      |+|+|++|+.+|++|++|||++. +..|++.++.+||+|+.++.+.+.   +++.+.+++++++.+.. ++.+++.|+.+
T Consensus        84 g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~~n~~~  163 (325)
T 1j0a_A           84 AFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIG  163 (325)
T ss_dssp             HHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHH
T ss_pred             HHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcchhhhhhHHHHHHHHHHHHcCCceEEEcCCCCCHHH
Confidence            99999999999999999999999 999999999999999999976433   25677888888876553 44567788888


Q ss_pred             HHHHHHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          156 PKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       156 ~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                       ..||.|++.||++|++..||+||+|+|||||++|++.++|+.+|+++||||..
T Consensus       164 -~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~  216 (325)
T 1j0a_A          164 -TLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAV  216 (325)
T ss_dssp             -HTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred             -HHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEe
Confidence             56889999999999976899999999999999999999999999999999964

>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A

Probab=100.00  E-value=1.7e-45  Score=323.28  Aligned_cols=193  Identities=17%  Similarity=0.267  Sum_probs=174.0

Q ss_pred             ccccCCceeeccccc----CCC----CceEEEEeCCCCC-CCchhhHHHHHHHHH-----HHHcCCCCCCC---------
Q 028372           13 ELIGNTPMVYLNNVV----DGC----VARIAAKLETMEP-CSSVKDRIAYSMIKD-----AEDKGLITPGK---------   69 (210)
Q Consensus        13 ~~~~~TPl~~~~~l~----~~~----~~~i~~K~E~~~p-tGS~K~R~a~~~~~~-----a~~~g~~~~~~---------   69 (210)
                      .++++|||+++++++    +.+    +.+||+|+|++|| |||||+|++.+++..     ++++|.+++|.         
T Consensus        74 ~g~~~TPL~~~~~l~~~l~~~~g~~~~~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~  153 (442)
T 3ss7_X           74 GGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPE  153 (442)
T ss_dssp             TTCCCCCEEECHHHHHHHHHHHTCCCCSEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHH
T ss_pred             CCCCCCCcEEhHhhhhHHHHhhCCCcCCeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhh
Confidence            456799999999876    444    4799999999999 999999999999986     78899888775         


Q ss_pred             -------eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCC
Q 028372           70 -------TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTP  142 (210)
Q Consensus        70 -------~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~  142 (210)
                             .+|+++|+||||+|+|++|+++|++|+||||++++..|++.++.+||+|+.++.  +++++.+.+++++++.+
T Consensus       154 ~r~~~~~~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~--~~~~a~~~a~~~a~~~~  231 (442)
T 3ss7_X          154 FKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQ--DYGVAVEEGRKAAQSDP  231 (442)
T ss_dssp             HHHHHHTSEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESS--CHHHHHHHHHHHHHTCT
T ss_pred             hhhhccCcEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC--CHHHHHHHHHHHHHhCC
Confidence                   489999999999999999999999999999999999999999999999999996  58999999999998887


Q ss_pred             CeEEcCCCCCChhHHHHHHhHHHHHHHhhCC--------CCCEEEEccCchhHHHHHHHHHHhc-CCCCEEEEEE
Q 028372          143 DGYLLRQFENPANPKIHYETTGPEIWQDSGG--------KVDAFISGIGTGGTVTGAGRFLKEN-NPDIKVVLRV  208 (210)
Q Consensus       143 ~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~--------~~d~vv~pvG~Gg~~~Gi~~~~k~~-~~~~~vigv~  208 (210)
                      ++||+++ .|+.+++.||.|++.||++|+++        .||+||+|+|+||+++|++.++|+. +|+++||||.
T Consensus       232 ~~~~i~~-~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVe  305 (442)
T 3ss7_X          232 NCFFIDD-ENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAE  305 (442)
T ss_dssp             TEEECCT-TTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred             CceeCCC-CChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEE
Confidence            7899998 56666689999999999999842        3669999999999999999999997 8999999985

>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*

Probab=100.00  E-value=3.5e-46  Score=318.04  Aligned_cols=198  Identities=16%  Similarity=0.138  Sum_probs=176.2

Q ss_pred             hhhHhhhccccCCceeecccccCCC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCCC
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGC-V-ARIAAKLETME-P--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIE--VTSG   78 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~-~-~~i~~K~E~~~-p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~--~ssG   78 (210)
                      ..++++...+++|||++++++++.+ | .+||+|+|++| |  +||||+|++.+++.++.++|.     ++||+  +|+|
T Consensus         4 ~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~-----~~vv~~G~ssG   78 (341)
T 1f2d_A            4 AKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDY-----THLVSIGGRQS   78 (341)
T ss_dssp             TSSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCC-----SEEEEEEETTC
T ss_pred             ccCCCcccCCCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCcch
Confidence            3456788999999999999998777 7 89999999999 9  999999999999999998885     67999  9999


Q ss_pred             chHHHHHHHHHHcCCcEEEEEcCCCC-----HH------HHHHHHHcCCEEEEECCCCCH---HHHHHHHHHHHHhCCCe
Q 028372           79 NTGVGLAFIAAARGYNLIIVMPSTCS-----ME------RRIVLRALGAEIILADSALRF---EEILEKGEEILKKTPDG  144 (210)
Q Consensus        79 N~g~alA~~a~~~g~~~~vvvp~~~~-----~~------~~~~~~~~Ga~v~~v~~~~~~---~~~~~~a~~~~~~~~~~  144 (210)
                      |||+|+|++|+.+|++|++|||++.+     +.      |++.++.+||+|+.++.....   +++.+.+++++++.+..
T Consensus        79 N~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~~~~a~~l~~~~~~~  158 (341)
T 1f2d_A           79 NQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKP  158 (341)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCE
T ss_pred             HHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccchhHHHHHHHHHHHHHhcCCcE
Confidence            99999999999999999999999887     44      999999999999999975432   36777888888877544


Q ss_pred             E-EcCC-CCCChhHHHHHHhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          145 Y-LLRQ-FENPANPKIHYETTGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       145 ~-~~~~-~~n~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      + +.+| |+||.+ ..||.|++.||++|++   ..||+||+|+|||||++|++.+||+.+|+++||||..
T Consensus       159 ~~i~~~~~~np~~-~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~  227 (341)
T 1f2d_A          159 YPIPAGCSEHKYG-GLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDA  227 (341)
T ss_dssp             EEECGGGTTSTTT-TTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEEC
T ss_pred             EEeCCCcCCCCcc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEe
Confidence            4 5578 999999 5689999999999995   4799999999999999999999999999999999964

>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*

Probab=100.00  E-value=2.1e-45  Score=313.36  Aligned_cols=199  Identities=20%  Similarity=0.203  Sum_probs=174.0

Q ss_pred             hhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCC--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeC--CCch
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEP--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVT--SGNT   80 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~s--sGN~   80 (210)
                      +.+++++...+++|||+++++|++.+|.+||+|+|++||  +||||+|++.+++.+++++|.     ++||++|  +|||
T Consensus        20 ~~a~~ri~~~~~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~-----~~vv~~s~tsGN~   94 (342)
T 4d9b_A           20 LTRFPRLEFIGAPTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGA-----DTLITAGAIQSNH   94 (342)
T ss_dssp             GGGSCCCCSSCSCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTC-----CEEEEEEETTCHH
T ss_pred             hccCCcccccCCCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCC-----CEEEEcCCcccHH
Confidence            567888999999999999999987778899999999999  999999999999999999886     6788886  7999


Q ss_pred             HHHHHHHHHHcCCcEEEEEcCCCCH--------HHHHHHHHcCCEEEEECCCCCHHHHH-HHHHHHHHhCCCeEEc-CCC
Q 028372           81 GVGLAFIAAARGYNLIIVMPSTCSM--------ERRIVLRALGAEIILADSALRFEEIL-EKGEEILKKTPDGYLL-RQF  150 (210)
Q Consensus        81 g~alA~~a~~~g~~~~vvvp~~~~~--------~~~~~~~~~Ga~v~~v~~~~~~~~~~-~~a~~~~~~~~~~~~~-~~~  150 (210)
                      |+|+|++|+.+|++|++|||++++.        .|++.++.+||+|+.++...+.+++. +.++++.++.+..|++ .++
T Consensus        95 g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~p~~~  174 (342)
T 4d9b_A           95 VRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPDAQLQTLATRIEAQGFRPYVIPVGG  174 (342)
T ss_dssp             HHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCSSHHHHHHHHHHHHHHTTCCEEECCGGG
T ss_pred             HHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEECchhhHHHHHHHHHHHHHhcCCceEEeCCCC
Confidence            9999999999999999999998773        58999999999999999865566665 4567777666444433 345


Q ss_pred             CCChhHHHHHHhHHHHHHHhhC--CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          151 ENPANPKIHYETTGPEIWQDSG--GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       151 ~n~~~~~~g~~t~~~Ei~~q~~--~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      .|+.+ ..||.|++.||++|++  ..||+||+|+|||||++|++.++|+.+|+++||||..
T Consensus       175 ~n~~~-~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~  234 (342)
T 4d9b_A          175 SSALG-AMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTV  234 (342)
T ss_dssp             CSHHH-HHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred             CChHH-HHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEe
Confidence            67776 6799999999999996  4799999999999999999999999999999999964

>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1

Probab=100.00  E-value=1.4e-44  Score=312.48  Aligned_cols=188  Identities=28%  Similarity=0.344  Sum_probs=170.5

Q ss_pred             cCCceeecccccCCCCceEEEEeCCCCC-CCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCc
Q 028372           16 GNTPMVYLNNVVDGCVARIAAKLETMEP-CSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYN   94 (210)
Q Consensus        16 ~~TPl~~~~~l~~~~~~~i~~K~E~~~p-tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~   94 (210)
                      .+|||++++++++. |.+||+|+|++|| |||||+|++.+++..+.  +.++++ ++|+++|+||||+|+|++|+.+|++
T Consensus        95 ~~TPL~~l~~Ls~~-g~~IylK~E~lnp~tGS~K~R~a~~~i~~l~--~a~~~g-~~Iv~assGNhG~AlA~aaa~~Gl~  170 (389)
T 1wkv_A           95 KPTPLVRSRLQLPN-GVRVWLKLEWYNPFSLSVKDRPAVEIISRLS--RRVEKG-SLVADATSSNFGVALSAVARLYGYR  170 (389)
T ss_dssp             CSCCEEECCCCCST-TEEEEEEEGGGSTTTSBTTHHHHHHHHHHHT--TTSCTT-CEEEEECCHHHHHHHHHHHHHTTCE
T ss_pred             CCCCeEEccccccC-CCeEEEEEcCCCCCcCChHHHHHHHHHHHHH--HHHhcC-CEEEEECCcHHHHHHHHHHHHcCCe
Confidence            57999999999876 8899999999999 99999999999999854  434455 6899999999999999999999999


Q ss_pred             EEEEEcCCCCHHHHHHHHHcCCEEE-EECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhC-
Q 028372           95 LIIVMPSTCSMERRIVLRALGAEII-LADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSG-  172 (210)
Q Consensus        95 ~~vvvp~~~~~~~~~~~~~~Ga~v~-~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~-  172 (210)
                      |++|||+.++..++.+|+.+||+|+ .++. .+++++.+.+++++++. +++|++||+||.+++.||.|++.||++|+. 
T Consensus       171 ~~ivmp~~~~~~k~~~~~~~GAeVv~~v~~-~~~~da~~~a~~~~~~~-g~~~~~p~~N~~~~~~~~~t~g~Ei~~Q~~~  248 (389)
T 1wkv_A          171 ARVYLPGAAEEFGKLLPRLLGAQVIVDPEA-PSTVHLLPRVMKDSKNE-GFVHVNQFYNDANFEAHMRGTAREIFVQSRR  248 (389)
T ss_dssp             EEEEEETTSCHHHHHHHHHTTCEEEEETTC-SSSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHHHHHTHHHHHHHHHHH
T ss_pred             EEEEECCCCCHHHHHHHHHcCCEEEEEcCC-CCHHHHHHHHHHHHHcc-CcEecCcCCChHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999 7773 35788888888887775 789999999999989999999999999994 


Q ss_pred             --CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          173 --GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       173 --~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                        ..||+||+|+||||+++|++.+||+.+|+++||||..
T Consensus       249 ~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~  287 (389)
T 1wkv_A          249 GGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQP  287 (389)
T ss_dssp             TTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             cCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEec
Confidence              3699999999999999999999999999999999964

>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*

Probab=100.00  E-value=2.1e-44  Score=312.92  Aligned_cols=194  Identities=20%  Similarity=0.232  Sum_probs=170.4

Q ss_pred             ccccCCceeecccccCCCC-ceEEEEeCCCC-CCCchhhHHHHHHHHHHH--HcCC----CC-------CCCe-EEEeeC
Q 028372           13 ELIGNTPMVYLNNVVDGCV-ARIAAKLETME-PCSSVKDRIAYSMIKDAE--DKGL----IT-------PGKT-TLIEVT   76 (210)
Q Consensus        13 ~~~~~TPl~~~~~l~~~~~-~~i~~K~E~~~-ptGS~K~R~a~~~~~~a~--~~g~----~~-------~~~~-~vv~~s   76 (210)
                      ..+++|||+++++|++.+| .+||+|+|++| |+||||+|++.+++.++.  +.|.    +.       .+.+ +|+++|
T Consensus        40 ~~~~~TPL~~~~~l~~~~g~~~i~~K~E~~~~ptgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~aS  119 (398)
T 4d9i_A           40 AGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTT  119 (398)
T ss_dssp             TTCCCCCEEECHHHHHHHTSSEEEEEEGGGSTTTTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEEEC
T ss_pred             CCCCCCCceehHHHHHHhCCCcEEEEECCCCCCCCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEEEC
Confidence            4578999999999988888 59999999999 999999999999999884  3331    00       1135 899999


Q ss_pred             CCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC-----CC
Q 028372           77 SGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ-----FE  151 (210)
Q Consensus        77 sGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----~~  151 (210)
                      +||||+|+|++|+.+|++|++|||++++..|++.++.+||+|+.+++  +++++.+.+++++++. +++|++|     |+
T Consensus       120 sGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~--~~~~a~~~a~~~~~~~-g~~~v~~~~~~g~~  196 (398)
T 4d9i_A          120 DGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDM--NYDDTVRLTMQHAQQH-GWEVVQDTAWEGYT  196 (398)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSS--CHHHHHHHHHHHHHHH-TCEECCSSCBTTBC
T ss_pred             CCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECC--CHHHHHHHHHHHHHHc-CCEEecCcccCCcC
Confidence            99999999999999999999999999999999999999999999996  5899999999998887 7899986     65


Q ss_pred             -CChhHHHHHHhHHHHHHHhhCCC---CCEEEEccCchhHHHHHHHHHHhc--CCCCEEEEEEe
Q 028372          152 -NPANPKIHYETTGPEIWQDSGGK---VDAFISGIGTGGTVTGAGRFLKEN--NPDIKVVLRVL  209 (210)
Q Consensus       152 -n~~~~~~g~~t~~~Ei~~q~~~~---~d~vv~pvG~Gg~~~Gi~~~~k~~--~~~~~vigv~~  209 (210)
                       |+.+.+.||.|++.||++|+++.   ||+||+|+|+||+++|++.++|+.  .|+++||+|..
T Consensus       197 ~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep  260 (398)
T 4d9i_A          197 KIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEP  260 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEE
T ss_pred             CCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEe
Confidence             45666889999999999999644   999999999999999999999876  57899999853

>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*

Probab=100.00  E-value=3.5e-44  Score=305.23  Aligned_cols=198  Identities=19%  Similarity=0.155  Sum_probs=170.8

Q ss_pred             hhhhHhhhccccCCceeecccccCCC-C-ceEEEEeCCCC-C--CCchhhHHHHHHHHHHHHcCCCCCCCeEEEe--eCC
Q 028372            5 NAIKRDVTELIGNTPMVYLNNVVDGC-V-ARIAAKLETME-P--CSSVKDRIAYSMIKDAEDKGLITPGKTTLIE--VTS   77 (210)
Q Consensus         5 ~~~~~~i~~~~~~TPl~~~~~l~~~~-~-~~i~~K~E~~~-p--tGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~--~ss   77 (210)
                      +..++++...+++|||++++++++.. | .+||+|+|++| |  +||||+|++.+++.++.++|.     ++||+  +|+
T Consensus         3 ~~~~~~i~~~~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~-----~~vv~~Gass   77 (338)
T 1tzj_A            3 LQRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC-----DTLVSIGGIQ   77 (338)
T ss_dssp             GGGSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTC-----CEEEEEEETT
T ss_pred             cccCCccccCCCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCC-----CEEEEcCCch
Confidence            34567899999999999999888777 7 89999999996 8  999999999999999998875     57888  799


Q ss_pred             CchHHHHHHHHHHcCCcEEEEEcCCCCHH--------HHHHHHHcCCEEEEECCCCCHH---HHHHHHHHHHHhCCCeEE
Q 028372           78 GNTGVGLAFIAAARGYNLIIVMPSTCSME--------RRIVLRALGAEIILADSALRFE---EILEKGEEILKKTPDGYL  146 (210)
Q Consensus        78 GN~g~alA~~a~~~g~~~~vvvp~~~~~~--------~~~~~~~~Ga~v~~v~~~~~~~---~~~~~a~~~~~~~~~~~~  146 (210)
                      ||||+|+|++|+.+|++|++|+|++.+..        |++.++.+||+|+.++.+.+..   .+.+.+++++++.+..|+
T Consensus        78 GN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~  157 (338)
T 1tzj_A           78 SNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYA  157 (338)
T ss_dssp             CHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC-------CHHHHHHHHHHHTTCCEEE
T ss_pred             hHHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCcchhhHHHHHHHHHHHHHhcCCceEE
Confidence            99999999999999999999999988765        9999999999999998753211   246778888877655554


Q ss_pred             c-CC-CCCChhHHHHHHhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhc-CCCCEEEEEEe
Q 028372          147 L-RQ-FENPANPKIHYETTGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKEN-NPDIKVVLRVL  209 (210)
Q Consensus       147 ~-~~-~~n~~~~~~g~~t~~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~-~~~~~vigv~~  209 (210)
                      + ++ |+||.+ ..||.|++.||++|++   ..||+||+|+|||||++|++.++|+. +|+ +||+|..
T Consensus       158 ~p~~~~~n~~~-~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~  224 (338)
T 1tzj_A          158 IPAGCSDHPLG-GLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDA  224 (338)
T ss_dssp             CCGGGTSSTTT-TTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEEC
T ss_pred             eCCCcCCCccc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEc
Confidence            4 56 899998 5789999999999995   47999999999999999999999998 899 9999964

>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}

Probab=100.00  E-value=5e-42  Score=299.57  Aligned_cols=193  Identities=17%  Similarity=0.162  Sum_probs=160.4

Q ss_pred             ccc-cCCceeecccccCCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHH
Q 028372           13 ELI-GNTPMVYLNNVVDGC-VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAA   90 (210)
Q Consensus        13 ~~~-~~TPl~~~~~l~~~~-~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~   90 (210)
                      +.+ .+|||+++++|++.+ +.+||+|+|++|||||||+|++.+++..+.++|+    ...|+++|+||||+|+|++|+.
T Consensus        72 ~~ig~~TPL~~~~~Ls~~~gg~~i~lK~E~l~ptGSfK~R~a~~~i~~a~~~g~----~~vI~~~ssGNhg~avA~aaa~  147 (418)
T 1x1q_A           72 QFAGRPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQALLARRMGK----RRVIAETGAGQHGVSVATVAAL  147 (418)
T ss_dssp             HTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSGGGBTTHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHHHH
T ss_pred             cccCCCCCcEEhHHhHhhcCCceEEEEEccCCcCccHHHHHHHHHHHHHHHcCC----CEEEEecCchHHHHHHHHHHHH
Confidence            566 469999999998777 5899999999999999999999999998888775    2445569999999999999999


Q ss_pred             cCCcEEEEEcCCC---CHHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEEc-CCCCCCh----hHHHHH
Q 028372           91 RGYNLIIVMPSTC---SMERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYLL-RQFENPA----NPKIHY  160 (210)
Q Consensus        91 ~g~~~~vvvp~~~---~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~n~~----~~~~g~  160 (210)
                      +|++|+||||+..   +..|+++|+.+||+|+.++. ..+++++.+.+.+ ++++.++.+|+ +++.|+.    ++..||
T Consensus       148 ~Gi~~~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq  227 (418)
T 1x1q_A          148 FGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQ  227 (418)
T ss_dssp             HTCEEEEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHH
Confidence            9999999999853   23678899999999999984 4468888887754 46655455554 5554443    222599


Q ss_pred             HhHHHHHHHhhC----CCCCEEEEccCchhHHHHHHHHHHhc-CCCCEEEEEEe
Q 028372          161 ETTGPEIWQDSG----GKVDAFISGIGTGGTVTGAGRFLKEN-NPDIKVVLRVL  209 (210)
Q Consensus       161 ~t~~~Ei~~q~~----~~~d~vv~pvG~Gg~~~Gi~~~~k~~-~~~~~vigv~~  209 (210)
                      +|++.||++|+.    ..||+||+|+|+||+++|++.++|++ .|+++||||..
T Consensus       228 ~t~~~Ei~~Ql~~~~~~~~D~vvvpvGgGG~~~Gi~~~~k~l~~p~~~vigVe~  281 (418)
T 1x1q_A          228 SVIGEEVKRQSLELFGRLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEA  281 (418)
T ss_dssp             THHHHHHHHHHHHHHSSCCSEEEEECSSSSHHHHHHHHHHTSCTTCCEEEEEEE
T ss_pred             HHHHHHHHHHHHhhcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCCeEEEEec
Confidence            999999999983    35999999999999999999999987 89999999964

>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*

Probab=100.00  E-value=1.9e-41  Score=293.26  Aligned_cols=195  Identities=21%  Similarity=0.213  Sum_probs=161.9

Q ss_pred             HhhhccccC-CceeecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEE-eeCCCchHHHHH
Q 028372            9 RDVTELIGN-TPMVYLNNVVDGCV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLI-EVTSGNTGVGLA   85 (210)
Q Consensus         9 ~~i~~~~~~-TPl~~~~~l~~~~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv-~~ssGN~g~alA   85 (210)
                      +.+.+.+++ |||+++++|++.+| .+||+|+|++|||||||+|++.+++..+.++|.     ..+| ++|+||||+|+|
T Consensus        41 ~~~~~~ig~~TPL~~~~~l~~~~g~~~i~~K~E~~~ptGSfK~R~a~~~i~~a~~~g~-----~~vv~~~ssGN~g~a~A  115 (388)
T 1v8z_A           41 YYLKTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK-----TRLIAETGAGQHGVATA  115 (388)
T ss_dssp             HHHHHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHH
T ss_pred             HHHHHhcCCCCCceehHhhHhhcCCceEEEEeccCCCCCCHHHHHHHHHHHHHHHcCC-----CEEEEecCchHHHHHHH
Confidence            334557865 99999999987775 899999999999999999999999999888775     3455 589999999999


Q ss_pred             HHHHHcCCcEEEEEcCC-CC--HHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEE-cCCCCCChh----
Q 028372           86 FIAAARGYNLIIVMPST-CS--MERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYL-LRQFENPAN----  155 (210)
Q Consensus        86 ~~a~~~g~~~~vvvp~~-~~--~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~-~~~~~n~~~----  155 (210)
                      ++|+.+|++|++|||+. .+  ..|+++++.+||+|+.++. ..+++++.+.+.+ ++++.++.+| ++++.|+.+    
T Consensus       116 ~aa~~~G~~~~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~  195 (388)
T 1v8z_A          116 MAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTI  195 (388)
T ss_dssp             HHHHHTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHH
T ss_pred             HHHHHcCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhH
Confidence            99999999999999974 22  4668999999999999985 4468888887754 5666545444 567666542    


Q ss_pred             HHHHHHhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          156 PKIHYETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       156 ~~~g~~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +..||.|++.||++|+    +..||+||+|+||||+++|++.+++ .+|+++||||..
T Consensus       196 ~~~~~~t~~~Ei~~q~~~~~~~~~d~vvvpvG~GG~~aGi~~~~~-~~~~~~vigve~  252 (388)
T 1v8z_A          196 VRDFQSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV-NDKKVKLVGVEA  252 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEE
T ss_pred             HHHHhHHHHHHHHHHHHHhcCCCCCEEEEecCccHhHHHHHHHHh-hCCCceEEEEcc
Confidence            2348999999999999    4459999999999999999999888 489999999863

>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...

Probab=100.00  E-value=8.1e-42  Score=296.47  Aligned_cols=194  Identities=18%  Similarity=0.179  Sum_probs=162.0

Q ss_pred             hhhcccc-CCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEe-eCCCchHHHHHHH
Q 028372           10 DVTELIG-NTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIE-VTSGNTGVGLAFI   87 (210)
Q Consensus        10 ~i~~~~~-~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~-~ssGN~g~alA~~   87 (210)
                      .+.+.++ +|||+++++|++.+|.+||+|+|++|||||||+|++.+++..+.++|.     .++++ +|+||||+|+|++
T Consensus        47 ~~~~~ig~~TPL~~~~~l~~~~g~~i~lK~E~l~ptGSfK~R~a~~~~~~a~~~g~-----~~vi~e~ssGNhg~a~A~a  121 (396)
T 1qop_B           47 LLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK-----SEIIAETGAGQHGVASALA  121 (396)
T ss_dssp             HHHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----CEEEEEESSSHHHHHHHHH
T ss_pred             HHHHhCCCCCCcEEhhhhhhccCCeEEEEeccCCCCCcHHHHHHHHHHHHHHHcCc-----CEEEEecCchHHHHHHHHH
Confidence            3446776 499999999998888999999999999999999999999999988875     44565 8999999999999


Q ss_pred             HHHcCCcEEEEEcCC-CCH--HHHHHHHHcCCEEEEECC-CCCHHHHHHHHHHH-HHhCCCeEEc-CCCCCCh----hHH
Q 028372           88 AAARGYNLIIVMPST-CSM--ERRIVLRALGAEIILADS-ALRFEEILEKGEEI-LKKTPDGYLL-RQFENPA----NPK  157 (210)
Q Consensus        88 a~~~g~~~~vvvp~~-~~~--~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~~-~~~~~~~~~~-~~~~n~~----~~~  157 (210)
                      |+.+|++|++|||+. .+.  .|+++|+.+||+|+.++. +.+++++.+.+.+. +++.++.+|+ +++.|+.    ++.
T Consensus       122 a~~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~v~  201 (396)
T 1qop_B          122 SALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVR  201 (396)
T ss_dssp             HHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHH
T ss_pred             HHHCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCchHHHH
Confidence            999999999999985 433  557899999999999984 44688888888764 6655465554 5554442    223


Q ss_pred             HHHHhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          158 IHYETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       158 ~g~~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      .||+|++.||++|+    +..||+||+|+|+||+++|++.+++ ..|+++||||..
T Consensus       202 ~g~~t~~~Ei~~Ql~~~~~~~~d~vvvpvG~GG~~~Gi~~~~~-~~~~~~vigVe~  256 (396)
T 1qop_B          202 EFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFI-NDTSVGLIGVEP  256 (396)
T ss_dssp             HTTTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEEE
T ss_pred             HHHhHHHHHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHHh-cCCCCEEEEEeC
Confidence            48999999999999    5579999999999999999999998 589999999963

>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*

Probab=100.00  E-value=5.7e-41  Score=297.48  Aligned_cols=191  Identities=19%  Similarity=0.142  Sum_probs=168.9

Q ss_pred             hhccccCCceeecccccCC-CC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHH---cCCCCCCCeEEEeeCCCchHHHHH
Q 028372           11 VTELIGNTPMVYLNNVVDG-CV-ARIAAKLETMEPCSSVKDRIAYSMIKDAED---KGLITPGKTTLIEVTSGNTGVGLA   85 (210)
Q Consensus        11 i~~~~~~TPl~~~~~l~~~-~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~---~g~~~~~~~~vv~~ssGN~g~alA   85 (210)
                      +...+++|||+++++++.. +| .+||+|+|++|||||||||++.+++..+.+   ++.   +..+|+++|+||||.|+|
T Consensus       124 v~l~~g~TPLv~l~~L~~~~lg~~~l~~K~E~~nPTGSFKDRga~~~~~~l~~~~~~~~---g~~~Vv~aSsGNtG~AlA  200 (486)
T 1e5x_A          124 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKR---PVVGVGCASTGDTSAALS  200 (486)
T ss_dssp             CCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTC---CCCEEEECCCSHHHHHHH
T ss_pred             ccccCCCCCcEECcccchhhcCCCcEEEeeccCCCccCHHHHHHHHHHHHHHHHHHcCC---CCeEEEEcCCCHHHHHHH
Confidence            3445788999999988876 66 489999999999999999999988876654   331   237899999999999999


Q ss_pred             HHHHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372           86 FIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG  164 (210)
Q Consensus        86 ~~a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  164 (210)
                      ++|+++|++|++|+|.+ ++..|+++|+.+||+|+.++++  ++++++.+++++++. ++++++++ |+.+ ..||.|++
T Consensus       201 ~~a~~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~vi~v~g~--~dd~~~~a~~l~~~~-~~~~vns~-N~~~-i~gq~t~~  275 (486)
T 1e5x_A          201 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTD--FDGCMKLIREITAEL-PIYLANSL-NSLR-LEGQKTAA  275 (486)
T ss_dssp             HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-CEEEGGGS-HHHH-HHHHTHHH
T ss_pred             HHHHHcCCeEEEEECCCCCCHHHHHHHHhCCCEEEEECCC--HHHHHHHHHHHHhcC-CEEEeCCC-CHHH-HHHHHHHH
Confidence            99999999999999996 9999999999999999999964  899999999998887 68899887 8888 67899999


Q ss_pred             HHHHHhhCC-CCCEEEEccCchhHHHHHHHHHHhcC------CCCEEEEEEe
Q 028372          165 PEIWQDSGG-KVDAFISGIGTGGTVTGAGRFLKENN------PDIKVVLRVL  209 (210)
Q Consensus       165 ~Ei~~q~~~-~~d~vv~pvG~Gg~~~Gi~~~~k~~~------~~~~vigv~~  209 (210)
                      +||++|+++ .||+||+|+|+||+++|++.+||+.+      |..++|+|..
T Consensus       276 ~Ei~~ql~~~~~D~vvvpvG~GG~i~Gi~~a~k~~~~~Gli~p~~rvi~Ve~  327 (486)
T 1e5x_A          276 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKXCQELGLVDRIPRMVCAQA  327 (486)
T ss_dssp             HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEEE
T ss_pred             HHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHHhhhhccCCCCCEEEEEec
Confidence            999999964 59999999999999999999998764      8899999864

>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A

Probab=100.00  E-value=3.2e-40  Score=288.34  Aligned_cols=193  Identities=19%  Similarity=0.223  Sum_probs=159.1

Q ss_pred             hcccc-CCceeecccccCCCC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372           12 TELIG-NTPMVYLNNVVDGCV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA   89 (210)
Q Consensus        12 ~~~~~-~TPl~~~~~l~~~~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~   89 (210)
                      .+.++ +|||+++++|++.+| .+||+|+|++|||||||+|++.+++..+++.|+    ...|+++|+||||+|+|++|+
T Consensus        75 ~~~~g~~TPL~~~~~Ls~~~gg~~i~lK~E~lnptGSfK~R~a~~~~~~a~~~g~----~~vI~~~ssGNhG~A~A~aaa  150 (422)
T 2o2e_A           75 ANYAGRPSPLYEATRLSQHAGSARIFLKREDLNHTGSHKINNVLGQALLARRMGK----TRVIAETGAGQHGVATATACA  150 (422)
T ss_dssp             TTTSSCSCCEEECGGGGGGTTTCEEEEECGGGCCSSTTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHH
T ss_pred             HHhCCCCCCeEEChhhHhhcCCCeEEEEEcCCCCCCcHHHHHHHHHHHHHHHcCC----CeEEEecCccHHHHHHHHHHH
Confidence            45664 599999999998884 899999999999999999999999999888775    245667999999999999999


Q ss_pred             HcCCcEEEEEcCCCC---HHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHH-HHHhCCCeEEc-CCCCCC--h--hHHHH
Q 028372           90 ARGYNLIIVMPSTCS---MERRIVLRALGAEIILADS-ALRFEEILEKGEE-ILKKTPDGYLL-RQFENP--A--NPKIH  159 (210)
Q Consensus        90 ~~g~~~~vvvp~~~~---~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~-~~~~~~~~~~~-~~~~n~--~--~~~~g  159 (210)
                      ++|++|+||||....   ..|+.+|+.+||+|+.++. +.+++++.+.+.+ ++++.++.+|+ +++.|+  .  ++..|
T Consensus       151 ~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~~~v~~~  230 (422)
T 2o2e_A          151 LLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFPTMVRDF  230 (422)
T ss_dssp             HHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCHHHHHHH
T ss_pred             HcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcHHHHHHH
Confidence            999999999998532   4677899999999999985 4578888887755 56665465654 444332  2  33458


Q ss_pred             HHhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          160 YETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       160 ~~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      |.|++.||.+|+    +..||+||+|+|+||+++|++.+++. .|+++||||..
T Consensus       231 q~t~g~Ei~~Ql~~~~~~~pD~vvvpvG~GG~~~Gi~~~~~~-~p~v~vigVe~  283 (422)
T 2o2e_A          231 QRIIGMEARVQIQGQAGRLPDAVVACVGGGSNAIGIFHAFLD-DPGVRLVGFEA  283 (422)
T ss_dssp             TTHHHHHHHHHHHHHSSSCCSEEEEEGGGHHHHHTTSGGGTT-CTTCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhhCCCCCEEEEccCCchhHHHHHHHHhc-CCCCeEEEEec
Confidence            999999999998    34599999999999999999888754 89999999964

>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1

Probab=100.00  E-value=1.4e-35  Score=259.50  Aligned_cols=176  Identities=16%  Similarity=0.118  Sum_probs=149.2

Q ss_pred             cCCceeecccccCCCCceEEEEeCCC-CCCCchhhHHHHHHH---HHHHHcCCCCCCCeEEEeeCCCchHHHHHH-HHHH
Q 028372           16 GNTPMVYLNNVVDGCVARIAAKLETM-EPCSSVKDRIAYSMI---KDAEDKGLITPGKTTLIEVTSGNTGVGLAF-IAAA   90 (210)
Q Consensus        16 ~~TPl~~~~~l~~~~~~~i~~K~E~~-~ptGS~K~R~a~~~~---~~a~~~g~~~~~~~~vv~~ssGN~g~alA~-~a~~   90 (210)
                      ++|||+++++       +||+ +|++ |||||||||++.+++   ..+ +++    +..+|+++|+||||.|+|+ +|+.
T Consensus        82 ~~TPL~~l~~-------~i~~-~E~~~~pTgSfKdr~a~~l~~~l~~a-~~~----~~~~Iv~atsGNtG~A~A~~~a~~  148 (428)
T 1vb3_A           82 FPAPVANVES-------DVGC-LELFHGPTLAFKDFGGRFMAQMLTHI-AGD----KPVTILTATSGDTGAAVAHAFYGL  148 (428)
T ss_dssp             SCCCEEEEET-------TEEE-EECCCSTTSBTHHHHHHHHHHHHHHH-TTT----CCEEEEEECSSSHHHHHHHHTTTC
T ss_pred             CCCCeEEecC-------CeEE-eeccCCCcccHHHHHHHHHHHHHHHH-Hhc----CCCEEEecCCchHHHHHHHHHhhh
Confidence            7899999874       6999 7777 699999999999885   444 233    2478999999999999994 9999


Q ss_pred             cCCcEEEEEcC-CCCHHHHHHHHHcCCEE--EEECCCCCHHHHHHHHHHHHHh-----CCCeEEcCCCCCChhHHHHHHh
Q 028372           91 RGYNLIIVMPS-TCSMERRIVLRALGAEI--ILADSALRFEEILEKGEEILKK-----TPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        91 ~g~~~~vvvp~-~~~~~~~~~~~~~Ga~v--~~v~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      +|++|+||+|+ ++++.++++|+.+||+|  +.+++  +++++++.++++.++     ..+++++++ .|+.+ ..||.+
T Consensus       149 ~G~~~~I~~P~~~~s~~k~~~m~~~GA~V~~v~v~g--~~d~~~~~~~~~~~d~~~~~~~~~~~~n~-~n~~~-~~gq~t  224 (428)
T 1vb3_A          149 PNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDG--DFDACQALVKQAFDDEELKVALGLNSANS-INISR-LLAQIC  224 (428)
T ss_dssp             TTEEEEEEEETTCSCHHHHHHHHSCCTTEEEEEEES--CHHHHHHHHHHGGGCHHHHHHHTEECCST-TSHHH-HHHTTH
T ss_pred             cCCeEEEEECCCCCCHHHHHHHHhcCCeEEEEEeCC--CHHHHHHHHHHHHhchhhhhhcCeeeCCC-CCHHH-HHHHHH
Confidence            99999999999 59999999999999999  55554  589998888887653     125666666 46776 689999


Q ss_pred             HHHHHHHhhCC---CCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          163 TGPEIWQDSGG---KVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       163 ~~~Ei~~q~~~---~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      ++.||++|+.+   .+|+||+|+|+||+++|++.+++...|..++|+|.
T Consensus       225 ~~~Ei~~ql~~~g~~~d~vvvpvG~GG~i~G~~~a~~~g~p~~kii~a~  273 (428)
T 1vb3_A          225 YYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAAT  273 (428)
T ss_dssp             HHHHHHTTSCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEE
T ss_pred             HHHHHHHHcccccCCCCEEEEeCCchHHHHHHHHHHHcCCCCCeEEeec
Confidence            99999999964   59999999999999999999999888988999975

>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}

Probab=100.00  E-value=3e-33  Score=245.97  Aligned_cols=176  Identities=14%  Similarity=0.137  Sum_probs=147.1

Q ss_pred             CCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCCchHHH-HHHHHHHc
Q 028372           17 NTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSM---IKDAE-DKGLITPGKTTLIEVTSGNTGVG-LAFIAAAR   91 (210)
Q Consensus        17 ~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~---~~~a~-~~g~~~~~~~~vv~~ssGN~g~a-lA~~a~~~   91 (210)
                      .|||+++..       ++|+|.|++|||||||||++.++   +..+. ++|.    ..+|+++||||||.+ +|++|+++
T Consensus        93 ~~pl~~l~~-------~~~~kee~~~PTgSFKDRga~~~~~~l~~a~~~~g~----~~~Vv~ASSGNtG~aa~aa~a~~~  161 (468)
T 4f4f_A           93 VCPLVQTDA-------NEFVLELFHGPTLAFKDVAMQLLARMMDYVLAQRGE----RATIVGATSGDTGGAAIEAFGGRD  161 (468)
T ss_dssp             SSCEEEEET-------TEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHTTC----CEEEEEECSSHHHHHHHHHHTTCS
T ss_pred             CCceEEecC-------CeehHHhccCCcccHHHHHHHHHHHHHHHHHHhcCC----CcEEEEECCchHHHHHHHHHHhcc
Confidence            399998742       69999999999999999999999   66664 5554    358999999999955 46668899


Q ss_pred             CCcEEEEEcCC-CCHHHHHHHHHcC-CEE--EEECCCCCHHHHHHHHHHHHHhCC-----CeEEcCCCCCChhHHHHHHh
Q 028372           92 GYNLIIVMPST-CSMERRIVLRALG-AEI--ILADSALRFEEILEKGEEILKKTP-----DGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        92 g~~~~vvvp~~-~~~~~~~~~~~~G-a~v--~~v~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~n~~~~~~g~~t  162 (210)
                      |++++|++|++ +++.|+++|+.+| ++|  +.+++  +++++++.+++++++.+     +++++++ .|+.. +.||.|
T Consensus       162 Gi~~~I~~P~~~~s~~k~~~~~~~gganV~vv~v~g--~fdda~~~~k~~~~d~~~~~~~~~~~vns-in~~r-i~GQ~T  237 (468)
T 4f4f_A          162 NTDIFILFPNGRVSPVQQRQMTSSGFSNVHALSIEG--NFDDCQNLVKGMFNDLEFCDALSLSGVNS-INWAR-IMPQVV  237 (468)
T ss_dssp             SEEEEEEEETTCSCHHHHHHHHCSCCTTEEEEEEES--CHHHHHHHHHHHHHCHHHHHHHTEEECCT-TSHHH-HGGGHH
T ss_pred             CCcEEEEeCCCCCCHHHHHHHHhcCCCeEEEeecCC--CHHHHHHHHHHHHhccccccccceEeCCC-CCHHH-HHhHHH
Confidence            99999999998 9999999999997 465  55554  59999999999877542     4666665 57776 789999


Q ss_pred             HHHHHHHhhCCCCCE---EEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          163 TGPEIWQDSGGKVDA---FISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~---vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +++||++|++ .+|.   |+||+|+||+++|++.+.+...|..|+|+|+
T Consensus       238 ~~~Ei~~ql~-~~d~~v~vvVPvG~GG~i~g~~~Ak~mGlPi~kli~a~  285 (468)
T 4f4f_A          238 YYFTAALSLG-APDRAVSFTVPTGNFGDIFAGYVAKRMGLPIEQLIIAT  285 (468)
T ss_dssp             HHHHHHHHTT-TTSSCEEEEEECSSSHHHHHHHHHHHHTCCEEEEEEEE
T ss_pred             HHHHHHHhcc-cCCCCeEEEEEeCCcHHHHHHHHHHHhCCCCCEEEEEe
Confidence            9999999994 7898   9999999999999999865556888999884

>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1

Probab=100.00  E-value=1.1e-31  Score=238.62  Aligned_cols=185  Identities=15%  Similarity=0.059  Sum_probs=143.1

Q ss_pred             cccCCceee--cccccCCCCceEEEEeCCCCCCCchhhHHHHHHHH---HHH-HcCC-----CCCCCeEEEeeCCCchHH
Q 028372           14 LIGNTPMVY--LNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIK---DAE-DKGL-----ITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus        14 ~~~~TPl~~--~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~---~a~-~~g~-----~~~~~~~vv~~ssGN~g~   82 (210)
                      ..+.|||++  ++++     .+||+|.|++|||||||||++.+++.   .+. ++|.     +.++ .+|+++||||||.
T Consensus        93 ~~g~TPLv~~~l~~l-----~~l~~K~e~~nPTgSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~-~~Iv~ATSGNtG~  166 (514)
T 1kl7_A           93 SDEVTPLVQNVTGDK-----ENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQ-ITVVGATSGDTGS  166 (514)
T ss_dssp             STTSSCEECCTTCSS-----SCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCC-EEEEEECSSSHHH
T ss_pred             CCCCCceeehhcccc-----cchhhhhhccCCCCcHHHHHHHHHHHHHHHHHHhcCCccccccCCC-CEEEECCCCcHHH
Confidence            366799999  7655     47999999999999999999999844   442 3452     3333 7899999999999


Q ss_pred             HHHHHH--HHcCCcEEEEEcCC-CCHHHHHHHHH-cCC--EEEEECCCCCHHHHHHHHHHHHHhCC--CeEEcCCCCCCh
Q 028372           83 GLAFIA--AARGYNLIIVMPST-CSMERRIVLRA-LGA--EIILADSALRFEEILEKGEEILKKTP--DGYLLRQFENPA  154 (210)
Q Consensus        83 alA~~a--~~~g~~~~vvvp~~-~~~~~~~~~~~-~Ga--~v~~v~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~n~~  154 (210)
                      | |++|  +..|++++|++|++ +++.++.+|.. +|+  +++.++  ++++++++.+++++++.+  +.+.+ .+.|+.
T Consensus       167 A-A~~a~a~~~Gi~~~I~~P~~~~S~~q~~qm~~~~g~~~~vv~v~--g~fdda~~~vk~l~~~~~~~~~~~~-~~~Ns~  242 (514)
T 1kl7_A          167 A-AIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT--GTFDNCQDIVKAIFGDKEFNSKHNV-GAVNSI  242 (514)
T ss_dssp             H-HHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES--SCHHHHHHHHHHHHHCSSCC--CCB-CCCCSC
T ss_pred             H-HHHHHHhhcCCeEEEEEcCCCCCHHHHHHHhhhcCCCEEEEEcC--CCHHHHHHHHHHHHhccccccccee-EeeCCC
Confidence            9 5555  88999999999997 89987777743 455  555555  469999999999988753  11111 234444


Q ss_pred             hH--HHHHHhHHHHHHHhh-C---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          155 NP--KIHYETTGPEIWQDS-G---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       155 ~~--~~g~~t~~~Ei~~q~-~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      ||  +.|+.+.++|+++|+ +   +.+|+||+|+|+||++.|++.+.+...|..|+|+|.
T Consensus       243 N~~ri~gQ~tyy~e~~~ql~~~~~~~~d~~vvP~GngG~i~a~~~ak~~G~p~~rli~v~  302 (514)
T 1kl7_A          243 NWARILAQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIAT  302 (514)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEE
T ss_pred             CHhHHhhHHHHHHHHHHHHhhhcCCCCcEEEEECCchHHHHHHHHHHHcCCCCCEEEEEe
Confidence            43  568999999999998 4   358999999999999999997666657888999985

>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}

Probab=99.97  E-value=8.1e-31  Score=230.87  Aligned_cols=180  Identities=15%  Similarity=0.111  Sum_probs=147.2

Q ss_pred             CceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHH---HHHHH-HcCCCCCCCeEEEeeCCCchHHHHHHHHH-HcC
Q 028372           18 TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSM---IKDAE-DKGLITPGKTTLIEVTSGNTGVGLAFIAA-ARG   92 (210)
Q Consensus        18 TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~---~~~a~-~~g~~~~~~~~vv~~ssGN~g~alA~~a~-~~g   92 (210)
                      |||+++..-   -+.++|+|.|++|||||||||++.++   +..+. ++|.    ..+|+++||||||.|.|++++ ..|
T Consensus       103 ~Pl~~l~~~---~~~~l~vkee~~~PTgSFKDRga~~~~~ll~~a~~~~g~----~~~Vv~ASSGNtG~Aaa~a~~~~~G  175 (487)
T 3v7n_A          103 TPLTTLGTE---NGAPVSLLELSNGPTLAFKDMAMQLLGNLFEYTLAKHGE----TLNILGATSGDTGSAAEYAMRGKEG  175 (487)
T ss_dssp             SCEEEEEEE---TTEEEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHTTTC----CEEEEEECSSHHHHHHHHHHTTCTT
T ss_pred             ceeEEecCC---CCcceeHHhhccCCcCcHHHHHHHHHHHHHHHHHHhcCC----CcEEEEeCChHHHHHHHHHHHhccC
Confidence            799887420   01139999999999999999999998   77775 4554    256999999999999888876 899


Q ss_pred             CcEEEEEcCC-CCHHHHHHHHHcCC---EEEEECCCCCHHHHHHHHHHHHHhC-----CCeEEcCCCCCChhHHHHHHhH
Q 028372           93 YNLIIVMPST-CSMERRIVLRALGA---EIILADSALRFEEILEKGEEILKKT-----PDGYLLRQFENPANPKIHYETT  163 (210)
Q Consensus        93 ~~~~vvvp~~-~~~~~~~~~~~~Ga---~v~~v~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~n~~~~~~g~~t~  163 (210)
                      ++++|++|++ +++.|+++|+.+|+   +++.+++  +++++++.++++.++.     -+.++++++ |+.. +.|+.+.
T Consensus       176 i~~~I~~P~~~~s~~k~~qm~~~Ga~nv~vv~v~G--~fDda~~~vk~~~~d~~~~~~~~l~~vns~-Np~r-i~gQ~ty  251 (487)
T 3v7n_A          176 VRVFMLSPHKKMSAFQTAQMYSLQDPNIFNLAVNG--VFDDCQDIVKAVSNDHAFKAQQKIGTVNSI-NWAR-VVAQVVY  251 (487)
T ss_dssp             EEEEEEEETTCSCHHHHHHHHTCCCTTEEEEEEES--CHHHHHHHHHHHHTCHHHHHHTTEECCSTT-CHHH-HHHHHHH
T ss_pred             CeEEEEECCCCCCHHHHHHHHhcCCCcEEEEEECC--CHHHHHHHHHHhhhchHHHhhcCeeeeCCC-CHHH-HHhHHHH
Confidence            9999999997 99999999999998   6777775  5899999998887631     256677664 6776 7899988


Q ss_pred             HHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          164 GPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       164 ~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      ++|+..|+.   +.+|+|+||+|+||+++|++.+.+...|..|+|++.
T Consensus       252 y~~~~~el~~~~~~~d~vvVP~GngG~i~g~~~A~~mGlp~~rli~a~  299 (487)
T 3v7n_A          252 YFKGYFAATRSNDERVSFTVPSGNFGNVCAGHIARMMGLPIEKLVVAT  299 (487)
T ss_dssp             HHHHHHHTCSSTTCCEEEEEGGGCHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred             HHHHHHHHHhcCCCCcEEEEecCchHHHHHHHHHHHcCCCCceEEEEe
Confidence            888888873   359999999999999999998876666877999874

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=96.27  E-value=0.16  Score=36.33  Aligned_cols=51  Identities=24%  Similarity=0.242  Sum_probs=38.6

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ..++..+.|..|..+|...+..|++++++-.   .+.+.+.++..|..++.-+.
T Consensus         8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~---~~~~~~~~~~~g~~~i~gd~   58 (140)
T 3fwz_A            8 NHALLVGYGRVGSLLGEKLLASDIPLVVIET---SRTRVDELRERGVRAVLGNA   58 (140)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEESCT
T ss_pred             CCEEEECcCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHHcCCCEEECCC
Confidence            3467778899999999999999999888755   35566666667777655443

>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2

Probab=94.52  E-value=0.43  Score=36.56  Aligned_cols=76  Identities=21%  Similarity=0.319  Sum_probs=57.7

Q ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE-------c--CCCCHHHHHHHH
Q 028372           42 EPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-------P--STCSMERRIVLR  112 (210)
Q Consensus        42 ~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv-------p--~~~~~~~~~~~~  112 (210)
                      +|.--+=+......+.+|.+.|.    +..|+.+++|.++..++-+.  -|+++++|.       |  ...++..++.++
T Consensus        22 ~~G~eNT~~tl~la~era~e~~I----k~iVVAS~sG~TA~k~~e~~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~   95 (201)
T 1vp8_A           22 KPGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELR   95 (201)
T ss_dssp             SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCChHHHHHHHHh--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence            34446677788888899999885    35566667798886665533  689999998       3  245899999999


Q ss_pred             HcCCEEEEECC
Q 028372          113 ALGAEIILADS  123 (210)
Q Consensus       113 ~~Ga~v~~v~~  123 (210)
                      ..|.+|+.-..
T Consensus        96 ~~G~~V~t~tH  106 (201)
T 1vp8_A           96 KRGAKIVRQSH  106 (201)
T ss_dssp             HTTCEEEECCC
T ss_pred             hCCCEEEEEec
Confidence            99999998664

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=94.44  E-value=1.1  Score=33.26  Aligned_cols=50  Identities=22%  Similarity=0.188  Sum_probs=37.2

Q ss_pred             EEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           71 TLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        71 ~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      .++....|..|..+|...+.. |.+++++-.   .+.+.+.++..|.+++..+.
T Consensus        41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~---~~~~~~~~~~~g~~~~~gd~   91 (183)
T 3c85_A           41 QVLILGMGRIGTGAYDELRARYGKISLGIEI---REEAAQQHRSEGRNVISGDA   91 (183)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHHCSCEEEEES---CHHHHHHHHHTTCCEEECCT
T ss_pred             cEEEECCCHHHHHHHHHHHhccCCeEEEEEC---CHHHHHHHHHCCCCEEEcCC
Confidence            355567899999999999888 999888744   35666667777877665443

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=94.27  E-value=1  Score=38.58  Aligned_cols=96  Identities=18%  Similarity=0.318  Sum_probs=61.6

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQ  149 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~  149 (210)
                      ..|+....|..|..+|..-+..|++++++-.   .+.+.+.++..|.+++.-+...  .                     
T Consensus         5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~---d~~~v~~~~~~g~~vi~GDat~--~---------------------   58 (413)
T 3l9w_A            5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDH---DPDHIETLRKFGMKVFYGDATR--M---------------------   58 (413)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCEEEEEC---CHHHHHHHHHTTCCCEESCTTC--H---------------------
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCCCEEEEEC---CHHHHHHHHhCCCeEEEcCCCC--H---------------------
Confidence            3477778899999999999999999888743   3556666666666655444321  1                     


Q ss_pred             CCCChhHHHHHHhHHHHHHHhhC-CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEE
Q 028372          150 FENPANPKIHYETTGPEIWQDSG-GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLR  207 (210)
Q Consensus       150 ~~n~~~~~~g~~t~~~Ei~~q~~-~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv  207 (210)
                                      +++++.+ .+.|.||++++.-....-++...|+.+|+++||+-
T Consensus        59 ----------------~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           59 ----------------DLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             ----------------HHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             ----------------HHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence                            1122211 24567777777666666666666677777776653

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=94.15  E-value=0.46  Score=38.92  Aligned_cols=60  Identities=28%  Similarity=0.279  Sum_probs=47.0

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +.+.+++|++.+|...+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+....
T Consensus       134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~  193 (325)
T 3jyn_A          134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS---SPEKAAHAKALGAWETIDYS  193 (325)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEETT
T ss_pred             HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEeCC
Confidence            4567788877777777899999999999999998776654   56788888889997665443

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=93.90  E-value=0.69  Score=37.93  Aligned_cols=61  Identities=21%  Similarity=0.321  Sum_probs=47.2

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      +.+.+++|++.+|...+|..|.+.+..++..|.+++++.+   ++.+++.++.+|++.+....+
T Consensus       142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~~~~~  202 (334)
T 3qwb_A          142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS---TDEKLKIAKEYGAEYLINASK  202 (334)
T ss_dssp             TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETTT
T ss_pred             HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEEeCCC
Confidence            4456788877777776899999999999999998766654   467888889999986655433

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=93.78  E-value=0.77  Score=37.62  Aligned_cols=60  Identities=23%  Similarity=0.284  Sum_probs=46.8

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHH-HHcCCEEEEECC
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVL-RALGAEIILADS  123 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~-~~~Ga~v~~v~~  123 (210)
                      +.+.+++|++.+|...+|..|.+++..++..|.+++++..   ++.+++.+ +.+|++.+....
T Consensus       143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~~g~~~~~~~~  203 (336)
T 4b7c_A          143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG---GAEKCRFLVEELGFDGAIDYK  203 (336)
T ss_dssp             HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCSEEEETT
T ss_pred             HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCCEEEECC
Confidence            5667888878778777899999999999999998766643   45677777 889997655433

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=93.67  E-value=0.98  Score=37.11  Aligned_cols=63  Identities=22%  Similarity=0.180  Sum_probs=47.1

Q ss_pred             HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        58 ~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      .+.+...+++|.+.+|.+ +|..|.+.+..|+.+|.+++++..   ++.+++.++.+|++.+....+
T Consensus       157 ~~l~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~i~~~~  219 (340)
T 3s2e_A          157 KGLKVTDTRPGQWVVISG-IGGLGHVAVQYARAMGLRVAAVDI---DDAKLNLARRLGAEVAVNARD  219 (340)
T ss_dssp             HHHHTTTCCTTSEEEEEC-CSTTHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHHcCCCEEEeCCC
Confidence            344566778887766654 588999999999999997666543   577888899999987655443

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=93.63  E-value=0.49  Score=40.62  Aligned_cols=55  Identities=24%  Similarity=0.337  Sum_probs=45.3

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        63 g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      ..+++|++.+|...+|..|.+.+..|+..|.+++++..   ++.+++.++.+|++.+.
T Consensus       216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~---~~~~~~~~~~lGa~~~i  270 (447)
T 4a0s_A          216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS---SAQKEAAVRALGCDLVI  270 (447)
T ss_dssp             TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCCCEE
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence            56788877777777799999999999999998877763   67888889999997654

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=93.43  E-value=0.69  Score=38.38  Aligned_cols=61  Identities=20%  Similarity=0.157  Sum_probs=47.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      +...+++|++.+|.+.+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+....+
T Consensus       161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~~~  221 (353)
T 4dup_A          161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG---STGKCEACERLGAKRGINYRS  221 (353)
T ss_dssp             TTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEEETTT
T ss_pred             HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEEeCCc
Confidence            5567888877777778899999999999999998666543   567788888899986654433

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=93.32  E-value=1.7  Score=34.59  Aligned_cols=55  Identities=16%  Similarity=0.109  Sum_probs=33.1

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEEC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILAD  122 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~  122 (210)
                      |+..+||.+++.-|.++|..-...|.+++++-.... .....+.++..|.+++.+.
T Consensus         7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~   62 (254)
T 4fn4_A            7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK   62 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence            347788888888888888877777776655432211 1222334455566555444

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=93.11  E-value=1  Score=37.48  Aligned_cols=58  Identities=26%  Similarity=0.292  Sum_probs=45.3

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +...+++|.+.+|.. +|..|.+.+..|+.+|.+++++.+   ++.+++.++.+|++.+...
T Consensus       183 ~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~~  240 (363)
T 3uog_A          183 EKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSS---SREKLDRAFALGADHGINR  240 (363)
T ss_dssp             TTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEET
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEec---CchhHHHHHHcCCCEEEcC
Confidence            566788887766665 899999999999999998776643   5678888899999765543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=93.05  E-value=1.1  Score=37.29  Aligned_cols=59  Identities=22%  Similarity=0.307  Sum_probs=45.2

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +.+.+++|++.+|...+|..|.+++..++..|.+++++.+   ++.+++.++.+|++.+...
T Consensus       157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~  215 (362)
T 2c0c_A          157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS---SDEKSAFLKSLGCDRPINY  215 (362)
T ss_dssp             HHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred             HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC---CHHHHHHHHHcCCcEEEec
Confidence            4456778877677666899999999999999998666554   4677788888999765543

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=93.03  E-value=0.55  Score=39.32  Aligned_cols=53  Identities=19%  Similarity=0.066  Sum_probs=42.0

Q ss_pred             CCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           66 TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        66 ~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++|.+.+|.+.+|..|.+.+..|+.+|.+++++.    ++.+++.++.+|++.+...
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~vi~~  215 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC----SPHNFDLAKSRGAEEVFDY  215 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEET
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe----CHHHHHHHHHcCCcEEEEC
Confidence            5676767777779999999999999999876654    4678889999999765543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=93.02  E-value=2.1  Score=34.09  Aligned_cols=30  Identities=33%  Similarity=0.388  Sum_probs=22.0

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLII   97 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~v   97 (210)
                      |+..+||.+++.-|.++|..-...|.++++
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi   38 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGARVIL   38 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence            457788888888888888777766665444

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=93.01  E-value=0.8  Score=37.78  Aligned_cols=59  Identities=25%  Similarity=0.417  Sum_probs=45.9

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +.+.+++|++.+|...+|..|.+++..++.+|.+++++..   ++.+++.++.+|++.+...
T Consensus       153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~v~~~  211 (342)
T 4eye_A          153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN---RTAATEFVKSVGADIVLPL  211 (342)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEEES
T ss_pred             HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCcEEecC
Confidence            5667888877777777799999999999999998777665   3456677788899766543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=92.95  E-value=1.7  Score=34.03  Aligned_cols=54  Identities=19%  Similarity=0.246  Sum_probs=37.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..... ....+.++..|.++..+..
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~   58 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPA   58 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTSCCEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhcCCceEEEeC
Confidence            47788888999999999988888988776544332 3344455555666655543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=92.80  E-value=0.68  Score=38.13  Aligned_cols=61  Identities=18%  Similarity=0.229  Sum_probs=45.7

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      .+...+++|++.+|...+|..|.+++..++.+|.+++++....   .+++.++.+|++.+....
T Consensus       137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~---~~~~~~~~lga~~~~~~~  197 (340)
T 3gms_A          137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN---KHTEELLRLGAAYVIDTS  197 (340)
T ss_dssp             HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS---TTHHHHHHHTCSEEEETT
T ss_pred             HHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH---HHHHHHHhCCCcEEEeCC
Confidence            3566788887777777778999999999999999877766533   455666778997665443

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=92.46  E-value=1  Score=36.75  Aligned_cols=61  Identities=26%  Similarity=0.351  Sum_probs=45.9

Q ss_pred             HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        58 ~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .+.+...+++|.+.+|...+|..|.+.+..|+.+|.+++++.    ...+++.++.+|++-+.-.
T Consensus       143 ~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~----~~~~~~~~~~lGa~~~i~~  203 (321)
T 3tqh_A          143 QALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA----SKRNHAFLKALGAEQCINY  203 (321)
T ss_dssp             HHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE----CHHHHHHHHHHTCSEEEET
T ss_pred             HHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe----ccchHHHHHHcCCCEEEeC
Confidence            344667788887766666689999999999999999876654    3456788899999855443

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=92.45  E-value=1.7  Score=34.66  Aligned_cols=55  Identities=7%  Similarity=-0.037  Sum_probs=40.1

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      |+..+||.+++.-|.++|..-...|.+++++-.........+.++..|.++..+.
T Consensus         7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~   61 (258)
T 4gkb_A            7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLP   61 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEE
Confidence            4577888888889999998888889888877766555555566666666555544

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=92.44  E-value=2.6  Score=33.33  Aligned_cols=56  Identities=27%  Similarity=0.325  Sum_probs=37.3

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--------HHHHHHHHHcCCEEEEECC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--------MERRIVLRALGAEIILADS  123 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--------~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ++..+|+..+|--|.++|..-...|.+++++......        ......++..|.++..+..
T Consensus         6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (274)
T 3e03_A            6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKC   69 (274)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEEC
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeC
Confidence            3477889999999999999888889987777654322        2223334445666655543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=92.39  E-value=1.3  Score=36.54  Aligned_cols=54  Identities=30%  Similarity=0.340  Sum_probs=44.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEI  118 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v  118 (210)
                      +...+++|++.+|...+|..|.+++..|+..|.+++++    .++.+++.++.+|++.
T Consensus       144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~----~~~~~~~~~~~lGa~~  197 (343)
T 3gaz_A          144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT----ARGSDLEYVRDLGATP  197 (343)
T ss_dssp             TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE----ECHHHHHHHHHHTSEE
T ss_pred             HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE----eCHHHHHHHHHcCCCE
Confidence            56778888777777768999999999999999986665    3467788889999988

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=92.01  E-value=1.2  Score=36.81  Aligned_cols=66  Identities=20%  Similarity=0.303  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           52 AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        52 a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      ++.++..+...|    ++..+|.+.+|..|.+.+..|+.+|.+++++.+   ++.+++.++.+|++.+....+
T Consensus       153 a~~~~~~~~~~g----~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~~Ga~~~~~~~~  218 (349)
T 3pi7_A          153 AIAMFDIVKQEG----EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR---RDEQIALLKDIGAAHVLNEKA  218 (349)
T ss_dssp             HHHHHHHHHHHC----CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEES---CGGGHHHHHHHTCSEEEETTS
T ss_pred             HHHHHHHHhhCC----CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEEECCc
Confidence            444444444333    135566678899999999999999998776654   455677788899976655443

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=91.90  E-value=1.9  Score=35.25  Aligned_cols=65  Identities=20%  Similarity=0.174  Sum_probs=47.7

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCC
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR  126 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~  126 (210)
                      +.....+++|++.+|. .+|.-|...+..|+.+|.+.++++..  ++.|++.++.+||+.+....+.+
T Consensus       152 ~~~~~~~~~g~~VlV~-GaG~vG~~aiq~ak~~G~~~vi~~~~--~~~k~~~a~~lGa~~~i~~~~~~  216 (346)
T 4a2c_A          152 AFHLAQGCENKNVIII-GAGTIGLLAIQCAVALGAKSVTAIDI--SSEKLALAKSFGAMQTFNSSEMS  216 (346)
T ss_dssp             HHHHTTCCTTSEEEEE-CCSHHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHTTCSEEEETTTSC
T ss_pred             HHHHhccCCCCEEEEE-CCCCcchHHHHHHHHcCCcEEEEEec--hHHHHHHHHHcCCeEEEeCCCCC
Confidence            3455566777665554 56888988889999999998777643  57788899999998776554433

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=91.77  E-value=2  Score=36.12  Aligned_cols=57  Identities=26%  Similarity=0.267  Sum_probs=42.1

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      .+...+++|.+.+|.. +|.-|...+..|+.+|.+.++.+.  .++.+++.++.+|++++
T Consensus       178 l~~~~~~~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~i  234 (398)
T 1kol_A          178 AVTAGVGPGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGD--LNPARLAHAKAQGFEIA  234 (398)
T ss_dssp             HHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCEEE
T ss_pred             HHHcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEc--CCHHHHHHHHHcCCcEE
Confidence            3455677886666654 799999999999999995444443  25778888999999854

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=91.75  E-value=2.4  Score=35.06  Aligned_cols=57  Identities=21%  Similarity=0.336  Sum_probs=44.5

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +...++++++.+|...+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+.
T Consensus       164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~~  220 (351)
T 1yb5_A          164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVF  220 (351)
T ss_dssp             TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred             HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHcCCCEEE
Confidence            3566788878788777899999999999999998666544   35677778889987544

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=91.68  E-value=3.3  Score=34.30  Aligned_cols=55  Identities=22%  Similarity=0.247  Sum_probs=38.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--------HHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--------MERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--------~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|--|.++|......|.+++++......        ....+.++..|.++..+..
T Consensus        46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~  108 (346)
T 3kvo_A           46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIV  108 (346)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEc
Confidence            477888888999999999988889988887665432        1334455666766665543

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=91.68  E-value=1.9  Score=35.38  Aligned_cols=59  Identities=22%  Similarity=0.209  Sum_probs=44.6

Q ss_pred             HHHc-CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           59 AEDK-GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        59 a~~~-g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +..+ ..++++++.+|...+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+.
T Consensus       157 al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~ga~~~~  216 (343)
T 2eih_A          157 MVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG---SEDKLRRAKALGADETV  216 (343)
T ss_dssp             HHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred             HHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence            3433 46778878788888799999999999999998766544   46677777788986543

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=91.57  E-value=1.4  Score=36.93  Aligned_cols=65  Identities=23%  Similarity=0.336  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEee-CCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           52 AYSMIKDAEDKGLITPGKTTLIEV-TSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        52 a~~~~~~a~~~g~~~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      ++.++..+.+     +|.+.+|.. .+|..|.+.+..|+.+|.+++++..   ++.+++.++.+|++.+....+
T Consensus       160 a~~~~~~~~~-----~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~~~~~~  225 (379)
T 3iup_A          160 ALGMVETMRL-----EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVR---KQEQADLLKAQGAVHVCNAAS  225 (379)
T ss_dssp             HHHHHHHHHH-----TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEES---SHHHHHHHHHTTCSCEEETTS
T ss_pred             HHHHHHHhcc-----CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHhCCCcEEEeCCC
Confidence            4444444443     334556653 7899999999999999998777653   578888999999976554433

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=91.49  E-value=2.1  Score=33.98  Aligned_cols=44  Identities=25%  Similarity=0.167  Sum_probs=30.6

Q ss_pred             CeEEEeeCCCc--hHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHH
Q 028372           69 KTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRA  113 (210)
Q Consensus        69 ~~~vv~~ssGN--~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~  113 (210)
                      +..+|+..+|+  -|.++|..-...|.+++++.... .....+.+..
T Consensus        27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~   72 (280)
T 3nrc_A           27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCA   72 (280)
T ss_dssp             CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHG
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHH
Confidence            46788887777  88888888888898877766554 4445555543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=91.43  E-value=2.2  Score=33.10  Aligned_cols=32  Identities=19%  Similarity=0.250  Sum_probs=25.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++-.
T Consensus        10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r   41 (253)
T 3qiv_A           10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADI   41 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcC
Confidence            47788888899999999888888888666543

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=91.33  E-value=2.1  Score=34.93  Aligned_cols=57  Identities=23%  Similarity=0.303  Sum_probs=43.6

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +.+.++++++.+|+..+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+.
T Consensus       139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~---~~~~~~~~~~~g~~~~~  195 (333)
T 1wly_A          139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS---TEEKAETARKLGCHHTI  195 (333)
T ss_dssp             TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred             HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence            3566788877777777899999999999999998766654   35667777778887554

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=91.30  E-value=2.8  Score=31.27  Aligned_cols=57  Identities=28%  Similarity=0.434  Sum_probs=42.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +...+++|++.+|+..+|..|.+++..++..|.+++++..   ++.+.+.++.+|++.+.
T Consensus        32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~   88 (198)
T 1pqw_A           32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEYVG   88 (198)
T ss_dssp             TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSEEE
T ss_pred             HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEe
Confidence            3456777877777776899999999999999998766543   35666677788986543

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=91.29  E-value=2.4  Score=33.74  Aligned_cols=54  Identities=17%  Similarity=0.140  Sum_probs=35.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..... .....+.++..|.++..+.
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   87 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIR   87 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE
Confidence            47788999999999999988888988777765422 1223334445555444443

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=91.23  E-value=3.3  Score=31.95  Aligned_cols=55  Identities=22%  Similarity=0.216  Sum_probs=36.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC-CCCH-HHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS-TCSM-ERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~-~~~~-~~~~~~~~~Ga~v~~v~~  123 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++... .... ...+.++..|.++..+..
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~   64 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA   64 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEEC
Confidence            467888889999999999888889988777654 2222 223344445666555543

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=91.19  E-value=3.3  Score=32.17  Aligned_cols=53  Identities=21%  Similarity=0.252  Sum_probs=35.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..... ....+.++..|.++..+.
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~   60 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA-PEAEAAIRNLGRRVLTVK   60 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC-HHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch-hHHHHHHHhcCCcEEEEE
Confidence            47789999999999999998888988777654331 221224455666665544

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=91.17  E-value=1.4  Score=36.41  Aligned_cols=60  Identities=27%  Similarity=0.361  Sum_probs=46.6

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~  120 (210)
                      +.+.+++|.+.+|.+.+|..|.+.+..|+.+|.++++++..... ..+++.++.+|++-+.
T Consensus       161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi  221 (357)
T 1zsy_A          161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI  221 (357)
T ss_dssp             HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE
T ss_pred             HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE
Confidence            44667888776776667999999999999999998888866543 4567788899997544

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=91.16  E-value=2.1  Score=33.58  Aligned_cols=54  Identities=13%  Similarity=0.109  Sum_probs=33.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   84 (262)
T 3rkr_A           30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA   84 (262)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEE
Confidence            477888888889999988888888887666443211 122233344455555443

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=91.08  E-value=2.5  Score=34.75  Aligned_cols=59  Identities=27%  Similarity=0.260  Sum_probs=43.9

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      .++..++++++.+|+..+|..|.+++..++.. |.+++++..   ++.+++.++.+|++.+..
T Consensus       163 l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~  222 (347)
T 1jvb_A          163 VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV---REEAVEAAKRAGADYVIN  222 (347)
T ss_dssp             HHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES---SHHHHHHHHHHTCSEEEE
T ss_pred             HHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHhCCCEEec
Confidence            34456778877777777779999999999999 998665543   356777778889875543

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=91.06  E-value=3.1  Score=33.85  Aligned_cols=57  Identities=21%  Similarity=0.320  Sum_probs=43.7

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +...+++|+..+|+..+|..|.+++..++..|.+++++..   ++.+++.++.+|++...
T Consensus       139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~  195 (333)
T 1v3u_A          139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAAF  195 (333)
T ss_dssp             TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEE
T ss_pred             HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCcEEE
Confidence            4556778878788888899999999999999997766543   35666777888986543

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=91.04  E-value=2.3  Score=35.11  Aligned_cols=58  Identities=17%  Similarity=0.176  Sum_probs=44.3

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      +.+.+++|+..+|+..+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+.-
T Consensus       156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~g~~~~~~  213 (354)
T 2j8z_A          156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG---SQKKLQMAEKLGAAAGFN  213 (354)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHHHTCSEEEE
T ss_pred             HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCcEEEe
Confidence            4566778877777777899999999999999998766544   456777778889875543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=90.90  E-value=5  Score=31.73  Aligned_cols=30  Identities=27%  Similarity=0.290  Sum_probs=22.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV   98 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv   98 (210)
                      +..+|+..+|--|.++|..-...|.+++++
T Consensus        27 k~~lVTGas~gIG~aia~~la~~G~~V~~~   56 (271)
T 4ibo_A           27 RTALVTGSSRGLGRAMAEGLAVAGARILIN   56 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            477888888888888888777777765543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=90.90  E-value=2.7  Score=33.06  Aligned_cols=53  Identities=25%  Similarity=0.248  Sum_probs=37.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|.-|.++|..-...|.+++++......  ..+.++..+...+.++-
T Consensus        28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~Dv   80 (260)
T 3gem_A           28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHA--SVTELRQAGAVALYGDF   80 (260)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH--HHHHHHHHTCEEEECCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH--HHHHHHhcCCeEEECCC
Confidence            367888888999999999988889998877654322  23444555666665554

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=90.83  E-value=2.4  Score=34.43  Aligned_cols=56  Identities=21%  Similarity=0.201  Sum_probs=43.4

Q ss_pred             cCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        62 ~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      ...++++++.+|+..+|..|.+++..++..|.+++++..   ++.+++.++.+|++.+.
T Consensus       135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~g~~~~~  190 (327)
T 1qor_A          135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQVI  190 (327)
T ss_dssp             TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEE
T ss_pred             hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHcCCCEEE
Confidence            566788877777777899999999999999997766544   35667777778887544

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=90.70  E-value=2.4  Score=32.90  Aligned_cols=32  Identities=19%  Similarity=0.235  Sum_probs=26.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|......|.+++++..
T Consensus        14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r   45 (260)
T 3awd_A           14 RVAIVTGGAQNIGLACVTALAEAGARVIIADL   45 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            47789999999999999988888888777654

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=90.66  E-value=1.9  Score=35.58  Aligned_cols=59  Identities=19%  Similarity=0.094  Sum_probs=43.6

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      +.+...+++|.+.+|.. +|..|.+.+..|+.+|. +++++ .  .++.+++.++.+|++.+..
T Consensus       158 al~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~-~--~~~~~~~~~~~lGa~~vi~  217 (352)
T 3fpc_A          158 GAELANIKLGDTVCVIG-IGPVGLMSVAGANHLGAGRIFAV-G--SRKHCCDIALEYGATDIIN  217 (352)
T ss_dssp             HHHHTTCCTTCCEEEEC-CSHHHHHHHHHHHTTTCSSEEEE-C--CCHHHHHHHHHHTCCEEEC
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEE-C--CCHHHHHHHHHhCCceEEc
Confidence            44566678887766664 69999999999999998 55554 2  3567888889999975543

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=90.64  E-value=2  Score=35.84  Aligned_cols=61  Identities=21%  Similarity=0.216  Sum_probs=43.9

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +.+...+++|.+.+|.+ +|..|.+.+..|+.+|.+.++.+.  .++.+++.++.+|++.+...
T Consensus       174 ~l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi~~  234 (370)
T 4ej6_A          174 GVDLSGIKAGSTVAILG-GGVIGLLTVQLARLAGATTVILST--RQATKRRLAEEVGATATVDP  234 (370)
T ss_dssp             HHHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCHHHHHHHHHHTCSEEECT
T ss_pred             HHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHcCCCEEECC
Confidence            34555677886666654 589999999999999995444443  35678888899999765543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=90.64  E-value=3  Score=29.89  Aligned_cols=48  Identities=15%  Similarity=0.179  Sum_probs=33.5

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-HcCCEEEE
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIIL  120 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~-~~Ga~v~~  120 (210)
                      ..++....|..|..+|...+..|.+++++-+.   +.+.+.++ ..|..++.
T Consensus        20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~---~~~~~~~~~~~g~~~~~   68 (155)
T 2g1u_A           20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKN---EYAFHRLNSEFSGFTVV   68 (155)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC---GGGGGGSCTTCCSEEEE
T ss_pred             CcEEEECCCHHHHHHHHHHHhCCCeEEEEECC---HHHHHHHHhcCCCcEEE
Confidence            34566678999999999999999988877553   23334444 56766544

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=90.61  E-value=2.6  Score=33.74  Aligned_cols=54  Identities=20%  Similarity=0.235  Sum_probs=35.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.+++++......  ....+.++..|.+++.+.
T Consensus        48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~  103 (291)
T 3ijr_A           48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLP  103 (291)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEE
Confidence            477889999999999999888889887776554321  122333445565555544

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=90.58  E-value=1.5  Score=36.36  Aligned_cols=58  Identities=22%  Similarity=0.219  Sum_probs=43.9

Q ss_pred             CCCCCC-CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEE
Q 028372           63 GLITPG-KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIIL  120 (210)
Q Consensus        63 g~~~~~-~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~  120 (210)
                      +.+++| .+.+|.+.+|..|.+.+..|+.+|.++++++..... ..+++.++.+|++.+.
T Consensus       162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi  221 (364)
T 1gu7_A          162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI  221 (364)
T ss_dssp             SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE
T ss_pred             hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE
Confidence            567788 777777777999999999999999998887765444 3445666888987544

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=90.52  E-value=2.5  Score=33.53  Aligned_cols=54  Identities=17%  Similarity=0.257  Sum_probs=34.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.+++++......  ....+.++..|.++..+.
T Consensus        30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   85 (283)
T 1g0o_A           30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK   85 (283)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEE
Confidence            477888888999999998888888887776544321  111233444555554443

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=90.50  E-value=3.3  Score=34.26  Aligned_cols=56  Identities=18%  Similarity=0.162  Sum_probs=41.7

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           63 GLITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        63 g~~~~~~~~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      ..+++|.+.+|... |..|...+..|+.+ |.+++++.+   ++.+++.++.+|++.+.-.
T Consensus       182 ~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~~  238 (359)
T 1h2b_A          182 RTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDV---KEEKLKLAERLGADHVVDA  238 (359)
T ss_dssp             TTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEES---SHHHHHHHHHTTCSEEEET
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC---CHHHHHHHHHhCCCEEEec
Confidence            66778866555555 88999989999999 997655543   4678888899999755443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=90.49  E-value=3.1  Score=32.77  Aligned_cols=55  Identities=15%  Similarity=0.185  Sum_probs=35.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|.-|.++|..-...|.++++....+..  ....+.++..|.++..+..
T Consensus        27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (272)
T 4e3z_A           27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG   83 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEc
Confidence            367888888999999999888889887665443321  1223344555666655543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=90.49  E-value=3.9  Score=32.57  Aligned_cols=34  Identities=35%  Similarity=0.372  Sum_probs=27.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +..+|+..+|.-|.++|..-...|.+++++....
T Consensus        10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~   43 (285)
T 3sc4_A           10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSA   43 (285)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            4778888889999999998888899887776543

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=90.39  E-value=3.5  Score=33.85  Aligned_cols=59  Identities=20%  Similarity=0.294  Sum_probs=43.3

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +.++..+++|++.+|+..+|..|.+++..++..|.+++++.+.   +.+.+.++.+|++.+.
T Consensus       161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~---~~~~~~~~~~g~~~~~  219 (347)
T 2hcy_A          161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGG---EGKEELFRSIGGEVFI  219 (347)
T ss_dssp             HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECS---TTHHHHHHHTTCCEEE
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCC---HHHHHHHHHcCCceEE
Confidence            3444457788787888888999999999999999987766543   3445667778986443

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=90.38  E-value=1.5  Score=37.71  Aligned_cols=57  Identities=33%  Similarity=0.362  Sum_probs=46.5

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        63 g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      ..+++|.+.+|...+|..|.+.+..|+.+|.+++++..   ++.+++.++.+|++.+...
T Consensus       224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~---~~~~~~~~~~lGa~~vi~~  280 (456)
T 3krt_A          224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS---SPQKAEICRAMGAEAIIDR  280 (456)
T ss_dssp             TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHTCCEEEET
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHhhCCcEEEec
Confidence            56788877677666799999999999999998887763   6788999999999766544

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=90.32  E-value=3.7  Score=29.30  Aligned_cols=30  Identities=13%  Similarity=0.177  Sum_probs=24.8

Q ss_pred             EEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      ++....|..|..++..-...|.+++++-+.
T Consensus         6 vlI~G~G~vG~~la~~L~~~g~~V~vid~~   35 (153)
T 1id1_A            6 FIVCGHSILAINTILQLNQRGQNVTVISNL   35 (153)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence            455568999999999988899998888654

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=90.26  E-value=2.7  Score=32.87  Aligned_cols=32  Identities=19%  Similarity=0.327  Sum_probs=25.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   34 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADL   34 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            46788889999999999888778888776644

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=90.25  E-value=2.8  Score=33.10  Aligned_cols=32  Identities=19%  Similarity=0.058  Sum_probs=26.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++.+|+..+|--|.++|..-...|.+++++..
T Consensus        32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r   63 (272)
T 1yb1_A           32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI   63 (272)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEc
Confidence            47788999999999999988888888776654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=90.20  E-value=2.5  Score=34.03  Aligned_cols=32  Identities=19%  Similarity=0.249  Sum_probs=26.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|......|.+++++..
T Consensus        32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r   63 (301)
T 3tjr_A           32 RAAVVTGGASGIGLATATEFARRGARLVLSDV   63 (301)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            47788888899999999988888888766644

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=90.19  E-value=2.5  Score=32.66  Aligned_cols=54  Identities=19%  Similarity=0.142  Sum_probs=34.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus         6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~   60 (247)
T 3lyl_A            6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLV   60 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence            467888888889999998888889887776553221 122333444555554443

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=90.15  E-value=2.9  Score=32.97  Aligned_cols=54  Identities=22%  Similarity=0.185  Sum_probs=35.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|.-|.++|..-...|.+++++......  ....+.++..|.++..+.
T Consensus        30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   85 (271)
T 4iin_A           30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIK   85 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEE
Confidence            477888888889999999888889887776654321  122334445555555444

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=90.10  E-value=2.9  Score=33.11  Aligned_cols=54  Identities=20%  Similarity=0.235  Sum_probs=33.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus         5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   59 (264)
T 3tfo_A            5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV   59 (264)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence            467888888888999988888888887666443211 112233444455555443

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=90.09  E-value=2.4  Score=33.19  Aligned_cols=54  Identities=13%  Similarity=0.155  Sum_probs=33.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.+++++-..... ....+.++..|.++..+.
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   67 (256)
T 3gaf_A           13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLE   67 (256)
T ss_dssp             CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            477888888888999888877778887665443211 122233444455554443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=89.99  E-value=4.8  Score=31.16  Aligned_cols=32  Identities=16%  Similarity=0.256  Sum_probs=25.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCc-EEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYN-LIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~-~~vvvp  100 (210)
                      ++.+|+..+|--|.++|..-...|.+ ++++..
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r   38 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDR   38 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence            46788888899999999988888987 555443

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=89.98  E-value=3.9  Score=31.91  Aligned_cols=54  Identities=17%  Similarity=0.089  Sum_probs=35.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|.-|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus        10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   64 (260)
T 2ae2_A           10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV   64 (260)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            477899999999999999888889887776543211 111233344465655444

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=89.96  E-value=3.2  Score=32.59  Aligned_cols=33  Identities=24%  Similarity=0.294  Sum_probs=26.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++..+|+..+|--|.++|..-...|.+++++-.
T Consensus        11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r   43 (264)
T 3ucx_A           11 DKVVVISGVGPALGTTLARRCAEQGADLVLAAR   43 (264)
T ss_dssp             TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            347788999999999999988888888766644

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=89.94  E-value=3.9  Score=33.66  Aligned_cols=57  Identities=28%  Similarity=0.417  Sum_probs=43.5

Q ss_pred             HcCCCCCC--CeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHH-cCCEEEE
Q 028372           61 DKGLITPG--KTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRA-LGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~--~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~-~Ga~v~~  120 (210)
                      +.+.++++  ++.+|+..+|..|.+++..++..|. +++++..   .+.+++.++. +|++.+.
T Consensus       152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~---~~~~~~~~~~~~g~~~~~  212 (357)
T 2zb4_A          152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG---THEKCILLTSELGFDAAI  212 (357)
T ss_dssp             HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTSCCSEEE
T ss_pred             HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC---CHHHHHHHHHHcCCceEE
Confidence            45667788  7888888889999999999999999 7666544   3566677765 8986544

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=89.93  E-value=1.9  Score=36.02  Aligned_cols=59  Identities=31%  Similarity=0.340  Sum_probs=44.5

Q ss_pred             HHHcCC-CCCCCeEEEeeCCCchHHHHHHHHHHcC-CcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           59 AEDKGL-ITPGKTTLIEVTSGNTGVGLAFIAAARG-YNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        59 a~~~g~-~~~~~~~vv~~ssGN~g~alA~~a~~~g-~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      +.+... +++|.+.+|.. +|..|.+.+..|+.+| .+++++.+   ++.+++.++.+|++.+..
T Consensus       186 al~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi~  246 (380)
T 1vj0_A          186 AFDEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAG---SPNRLKLAEEIGADLTLN  246 (380)
T ss_dssp             HHHTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEES---CHHHHHHHHHTTCSEEEE
T ss_pred             HHHhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcC---CHHHHHHHHHcCCcEEEe
Confidence            344556 77887766666 8999999999999999 57766654   467888888999975543

>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2

Probab=89.93  E-value=1.6  Score=33.52  Aligned_cols=75  Identities=21%  Similarity=0.309  Sum_probs=54.5

Q ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE-------c--CCCCHHHHHHHH
Q 028372           42 EPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM-------P--STCSMERRIVLR  112 (210)
Q Consensus        42 ~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv-------p--~~~~~~~~~~~~  112 (210)
                      +|.--+=+..+...+.+|.+.|.    +..|+.+++|.++..++-+.  -| ++++|.       |  ...++..++.++
T Consensus        30 ~~G~eNT~~tl~la~era~e~~I----k~iVVASssG~TA~k~~e~~--~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~  102 (206)
T 1t57_A           30 EPGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV--EG-NIVSVTHHAGFREKGQLELEDEARDALL  102 (206)
T ss_dssp             SCSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC--CS-EEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHcCC----CEEEEEeCCCHHHHHHHHHc--cC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence            44446677888888899999885    35566666788876655533  45 777776       3  245889999999


Q ss_pred             HcCCEEEEECC
Q 028372          113 ALGAEIILADS  123 (210)
Q Consensus       113 ~~Ga~v~~v~~  123 (210)
                      ..|.+|+.-..
T Consensus       103 ~~G~~V~t~tH  113 (206)
T 1t57_A          103 ERGVNVYAGSH  113 (206)
T ss_dssp             HHTCEEECCSC
T ss_pred             hCCCEEEEeec
Confidence            99999987664

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=89.92  E-value=3.6  Score=32.55  Aligned_cols=50  Identities=6%  Similarity=0.051  Sum_probs=32.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      ++.+||.+++.-|.++|..-...|.++++.-.   ...+.+.+...+.++..+
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~---~~~~~~~~~~~~~~~~~~   52 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDI---DEKRSADFAKERPNLFYF   52 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES---CHHHHHHHHTTCTTEEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHhcCCEEEE
Confidence            46788888888999998888888877666532   233444444444444433

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=89.89  E-value=2  Score=34.51  Aligned_cols=32  Identities=28%  Similarity=0.256  Sum_probs=24.6

Q ss_pred             CeEEEeeCCCc--hHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN--~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.  -|.++|..-...|.+++++..
T Consensus        32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r   65 (293)
T 3grk_A           32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQ   65 (293)
T ss_dssp             CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcC
Confidence            47788888877  888888888888887666543

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=89.82  E-value=7.4  Score=31.99  Aligned_cols=57  Identities=25%  Similarity=0.373  Sum_probs=41.4

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      .+...+++|.+.+|.+ +|..|.+.+..|+.+|. +++++.+   ++.+++.++.+|++.+.
T Consensus       164 l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi  221 (356)
T 1pl8_A          164 CRRGGVTLGHKVLVCG-AGPIGMVTLLVAKAMGAAQVVVTDL---SATRLSKAKEIGADLVL  221 (356)
T ss_dssp             HHHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEES---CHHHHHHHHHTTCSEEE
T ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence            3445577776666654 68899999999999999 5555433   56788888999997443

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=89.80  E-value=0.8  Score=37.21  Aligned_cols=58  Identities=19%  Similarity=0.146  Sum_probs=44.1

Q ss_pred             HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        58 ~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      .+.+...+++|.+.+|... |..|.+.+..|+.+|.+++++.    ++.+++.++.+|++.+.
T Consensus       133 ~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~  190 (315)
T 3goh_A          133 QAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS----ASLSQALAAKRGVRHLY  190 (315)
T ss_dssp             HHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC----SSCCHHHHHHHTEEEEE
T ss_pred             HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE----ChhhHHHHHHcCCCEEE
Confidence            3446777888877666666 9999999999999999766664    34567778889987654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=89.72  E-value=3.3  Score=32.70  Aligned_cols=54  Identities=22%  Similarity=0.265  Sum_probs=34.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.++++....+.  .....+.++..|.++..+.
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (269)
T 4dmm_A           29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK   84 (269)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEE
Confidence            46788888888999999888888988777655322  1222334445555555444

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=89.72  E-value=2.3  Score=33.66  Aligned_cols=33  Identities=27%  Similarity=0.243  Sum_probs=27.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|--|.++|..-...|.+++++-..
T Consensus        11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~   43 (281)
T 3s55_A           11 KTALITGGARGMGRSHAVALAEAGADIAICDRC   43 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            477888888999999999988889987776553

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=89.69  E-value=3.5  Score=32.01  Aligned_cols=32  Identities=31%  Similarity=0.265  Sum_probs=26.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r   39 (247)
T 2jah_A            8 KVALITGASSGIGEATARALAAEGAAVAIAAR   39 (247)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            47789999999999999888888888766644

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=89.62  E-value=2.8  Score=34.83  Aligned_cols=55  Identities=25%  Similarity=0.261  Sum_probs=42.1

Q ss_pred             CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           65 ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        65 ~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +++|++.+|...+|.-|.+.+..|+.+|.+++++.    ...+++.++.+|++.+.-..
T Consensus       181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~----~~~~~~~~~~lGa~~v~~~~  235 (375)
T 2vn8_A          181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC----SQDASELVRKLGADDVIDYK  235 (375)
T ss_dssp             TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE----CGGGHHHHHHTTCSEEEETT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe----ChHHHHHHHHcCCCEEEECC
Confidence            77887777777689999999999999998766554    23577788999997655443

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=89.53  E-value=2.8  Score=33.31  Aligned_cols=54  Identities=22%  Similarity=0.187  Sum_probs=33.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.+++++...... ....+.++..|.++..+.
T Consensus        25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~   79 (279)
T 3sju_A           25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSS   79 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            477888888999999998888888887665443211 122233444455554443

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=89.51  E-value=3.4  Score=33.94  Aligned_cols=59  Identities=32%  Similarity=0.317  Sum_probs=44.4

Q ss_pred             HcCCCC------CCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           61 DKGLIT------PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        61 ~~g~~~------~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +...++      +|.+.+|.+.+|..|.+.+..|+.+|.+++++.+   .+.+++.++.+|++.+...
T Consensus       138 ~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi~~  202 (346)
T 3fbg_A          138 DVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS---RNETIEWTKKMGADIVLNH  202 (346)
T ss_dssp             TTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC---SHHHHHHHHHHTCSEEECT
T ss_pred             HhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCcEEEEC
Confidence            445565      6767677768899999999999999997666533   4678888888998765433

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=89.43  E-value=4.1  Score=33.73  Aligned_cols=59  Identities=20%  Similarity=0.245  Sum_probs=42.9

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCc-EEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYN-LIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~-~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +...+++|++.+|.+ +|.-|.+.+..|+.+|.+ ++++.+   ++.+++.++.+|++.+....
T Consensus       184 ~~~~~~~g~~VlV~G-aG~vG~~a~qlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~vi~~~  243 (371)
T 1f8f_A          184 NALKVTPASSFVTWG-AGAVGLSALLAAKVCGASIIIAVDI---VESRLELAKQLGATHVINSK  243 (371)
T ss_dssp             TTTCCCTTCEEEEES-CSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHHHTCSEEEETT
T ss_pred             hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC---CHHHHHHHHHcCCCEEecCC
Confidence            456678886666654 688999999999999995 444432   46788888899997655443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=89.34  E-value=2.9  Score=32.89  Aligned_cols=34  Identities=21%  Similarity=0.251  Sum_probs=21.7

Q ss_pred             CCeEEEeeCCCc--hHHHHHHHHHHcCCcEEEEEcC
Q 028372           68 GKTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        68 ~~~~vv~~ssGN--~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      |+..+||..+|+  -|.++|..-...|.++++.-..
T Consensus         6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~   41 (256)
T 4fs3_A            6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRK   41 (256)
T ss_dssp             TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECC
Confidence            457788876664  5666666666777776665443

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=89.21  E-value=3.6  Score=32.60  Aligned_cols=32  Identities=13%  Similarity=0.267  Sum_probs=26.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus        23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   54 (277)
T 2rhc_B           23 EVALVTGATSGIGLEIARRLGKEGLRVFVCAR   54 (277)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            47789999999999999888888888776654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=89.17  E-value=3.5  Score=33.47  Aligned_cols=32  Identities=19%  Similarity=0.285  Sum_probs=25.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++-.
T Consensus        28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r   59 (322)
T 3qlj_A           28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDI   59 (322)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888888888888888888988777643

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=89.17  E-value=3.4  Score=33.94  Aligned_cols=57  Identities=32%  Similarity=0.401  Sum_probs=42.6

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +.+...+ +|.+.+|... |..|.+++..++.+|. +++++.+   ++.+++.++.+|++.+.
T Consensus       160 ~l~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~---~~~~~~~~~~~Ga~~~~  217 (348)
T 2d8a_A          160 TVLAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP---SDFRRELAKKVGADYVI  217 (348)
T ss_dssp             HHTTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS---CHHHHHHHHHHTCSEEE
T ss_pred             HHHhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC---CHHHHHHHHHhCCCEEE
Confidence            3455566 7767666666 9999999999999999 7666544   36778888889987544

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=89.15  E-value=1.9  Score=33.75  Aligned_cols=32  Identities=28%  Similarity=0.307  Sum_probs=25.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++..
T Consensus         7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r   38 (257)
T 3imf_A            7 KVVIITGGSSGMGKGMATRFAKEGARVVITGR   38 (257)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888888899998888888888766544

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=89.14  E-value=6.2  Score=30.19  Aligned_cols=54  Identities=19%  Similarity=0.316  Sum_probs=35.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCH--HHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM--ERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~--~~~~~~~~~Ga~v~~v~  122 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++...+...  ...+.++..|.++..+.
T Consensus         6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~   61 (247)
T 2hq1_A            6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK   61 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEE
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEE
Confidence            4778899999999999998888898877764333221  22334444566555544

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=89.11  E-value=2.7  Score=32.41  Aligned_cols=32  Identities=19%  Similarity=0.257  Sum_probs=25.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++..
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r   43 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDI   43 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcC
Confidence            46788888899999999887777887766654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=88.92  E-value=7  Score=30.53  Aligned_cols=54  Identities=22%  Similarity=0.218  Sum_probs=35.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.++++....+..  ....+.++..|.++..+.
T Consensus        27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~   82 (267)
T 4iiu_A           27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLS   82 (267)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEE
Confidence            367888888889999999888889888776654321  222334444455554443

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=88.82  E-value=3  Score=33.24  Aligned_cols=32  Identities=22%  Similarity=0.173  Sum_probs=25.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++-.
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r   60 (283)
T 3v8b_A           29 PVALITGAGSGIGRATALALAADGVTVGALGR   60 (283)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            37788888898999999888777887766543

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=88.75  E-value=2.1  Score=34.17  Aligned_cols=54  Identities=22%  Similarity=0.319  Sum_probs=34.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.+++++...+..  ....+.++..|.++..+.
T Consensus        30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (280)
T 4da9_A           30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR   85 (280)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            467888888989999998888888887776532211  122233444455554443

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=88.72  E-value=4.8  Score=33.74  Aligned_cols=57  Identities=26%  Similarity=0.200  Sum_probs=42.1

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      +.+...+++|.+.+|.. +|.-|...+..|+.+|. +++++.+   ++.+++.++.+|++++
T Consensus       177 al~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~---~~~~~~~a~~lGa~~i  234 (398)
T 2dph_A          177 GCVSAGVKPGSHVYIAG-AGPVGRCAAAGARLLGAACVIVGDQ---NPERLKLLSDAGFETI  234 (398)
T ss_dssp             HHHHTTCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEES---CHHHHHHHHTTTCEEE
T ss_pred             HHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCcEE
Confidence            33556678886656654 69899999999999998 5555443   4677888899999743

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=88.66  E-value=3.8  Score=32.07  Aligned_cols=32  Identities=25%  Similarity=0.355  Sum_probs=25.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   39 (262)
T 1zem_A            8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDM   39 (262)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            47788989999999999888888887766544

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=88.58  E-value=2.1  Score=36.09  Aligned_cols=56  Identities=27%  Similarity=0.358  Sum_probs=41.5

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .+++|.+.+|.+ +|..|.+.+..|+.+|...++.+.  .++.+++.++.+|++.+.-.
T Consensus       210 ~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi~~  265 (404)
T 3ip1_A          210 GIRPGDNVVILG-GGPIGLAAVAILKHAGASKVILSE--PSEVRRNLAKELGADHVIDP  265 (404)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCHHHHHHHHHHTCSEEECT
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHcCCCEEEcC
Confidence            677886666654 599999999999999994444433  35688888899999765544

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=88.56  E-value=4.3  Score=31.48  Aligned_cols=54  Identities=19%  Similarity=0.180  Sum_probs=34.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++...+..  ....+.++..|.++..+.
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~   63 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK   63 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEE
Confidence            477888888999999999888889887776552211  111233444565555444

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=88.49  E-value=4.7  Score=31.75  Aligned_cols=32  Identities=19%  Similarity=0.121  Sum_probs=26.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r   53 (273)
T 1ae1_A           22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSR   53 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeC
Confidence            47788999999999999988888888766644

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=88.43  E-value=3.3  Score=33.29  Aligned_cols=33  Identities=21%  Similarity=0.258  Sum_probs=27.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|.-|.++|..-...|.+++++-..
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~   61 (299)
T 3t7c_A           29 KVAFITGAARGQGRSHAITLAREGADIIAIDVC   61 (299)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            477888888989999999888889988776543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=88.35  E-value=6.8  Score=30.51  Aligned_cols=33  Identities=15%  Similarity=0.206  Sum_probs=25.3

Q ss_pred             CeEEEeeCCCc--hHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN--~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|.  -|.++|..-...|.+++++...
T Consensus         8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~   42 (266)
T 3oig_A            8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG   42 (266)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence            46788888877  8888888888888887766544

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=88.34  E-value=4.5  Score=31.45  Aligned_cols=32  Identities=19%  Similarity=0.273  Sum_probs=25.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   34 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADY   34 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888999999999888888887766644

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=88.33  E-value=3.1  Score=32.84  Aligned_cols=33  Identities=30%  Similarity=0.319  Sum_probs=27.1

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++..+|+..+|--|.++|..-...|.+++++-.
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   45 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDL   45 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEec
Confidence            347788999999999999988888998777654

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=88.32  E-value=3.9  Score=31.64  Aligned_cols=32  Identities=25%  Similarity=0.345  Sum_probs=25.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r   36 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYA   36 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888899999999888888888777654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=88.30  E-value=5  Score=28.03  Aligned_cols=50  Identities=30%  Similarity=0.370  Sum_probs=37.8

Q ss_pred             EEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      .++..+.|..|.++|......|.+++++-.   .+.+.+.++..|.+++..+.
T Consensus         8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~---~~~~~~~~~~~~~~~~~gd~   57 (141)
T 3llv_A            8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDK---SKEKIELLEDEGFDAVIADP   57 (141)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEEES---CHHHHHHHHHTTCEEEECCT
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCeEEEEEC---CHHHHHHHHHCCCcEEECCC
Confidence            355566799999999999999999888754   45666677777877766554

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=88.24  E-value=4.7  Score=32.89  Aligned_cols=57  Identities=19%  Similarity=0.219  Sum_probs=43.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-HcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~-~~Ga~v~~  120 (210)
                      +...+++|++.+|...+|..|.+++..++..|.+++++..   ++.+++.++ .+|++.+.
T Consensus       149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~---~~~~~~~~~~~~g~~~~~  206 (345)
T 2j3h_A          149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG---SKEKVDLLKTKFGFDDAF  206 (345)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTSCCSEEE
T ss_pred             HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHHcCCceEE
Confidence            4556778877777777899999999999999997666543   456777777 68986543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=88.22  E-value=3.3  Score=32.77  Aligned_cols=32  Identities=22%  Similarity=0.223  Sum_probs=26.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.
T Consensus        16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r   47 (280)
T 3pgx_A           16 RVAFITGAARGQGRSHAVRLAAEGADIIACDI   47 (280)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEec
Confidence            47788888999999999988888998877654

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=88.15  E-value=2  Score=34.51  Aligned_cols=55  Identities=25%  Similarity=0.373  Sum_probs=41.4

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      +.+ +++|++.+|...+|..|.+++..++.+|.+++++.+   ++.+++.++.+|++.+
T Consensus       120 ~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~~ga~~~  174 (302)
T 1iz0_A          120 RAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS---RPEKLALPLALGAEEA  174 (302)
T ss_dssp             HTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SGGGSHHHHHTTCSEE
T ss_pred             Hhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHhcCCCEE
Confidence            356 788877777777799999999999999997766654   2445556677888644

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=88.12  E-value=4.6  Score=33.17  Aligned_cols=56  Identities=25%  Similarity=0.277  Sum_probs=41.2

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +...+++|++.+|.+ +|..|.+.+..|+.+|.+++++.   .++.+++.++.+|++.+.
T Consensus       162 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~Vi~~~---~~~~~~~~~~~lGa~~~~  217 (352)
T 1e3j_A          162 RRAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTA---RSPRRLEVAKNCGADVTL  217 (352)
T ss_dssp             HHHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEE
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEc---CCHHHHHHHHHhCCCEEE
Confidence            444577786766655 58899999999999999844432   257788888999997544

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=88.09  E-value=1.8  Score=35.58  Aligned_cols=57  Identities=14%  Similarity=0.114  Sum_probs=41.0

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      .++..+++|.+.+|. .+|..|.+.+..|+.+|.+++++..   ++.+++.++.+|++.+.
T Consensus       169 l~~~~~~~g~~VlV~-GaG~vG~~a~qla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~v~  225 (348)
T 3two_A          169 LKFSKVTKGTKVGVA-GFGGLGSMAVKYAVAMGAEVSVFAR---NEHKKQDALSMGVKHFY  225 (348)
T ss_dssp             HHHTTCCTTCEEEEE-SCSHHHHHHHHHHHHTTCEEEEECS---SSTTHHHHHHTTCSEEE
T ss_pred             HHhcCCCCCCEEEEE-CCcHHHHHHHHHHHHCCCeEEEEeC---CHHHHHHHHhcCCCeec
Confidence            334467788666665 4699999999999999997666543   34566777889987554

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=88.07  E-value=4.5  Score=33.07  Aligned_cols=52  Identities=27%  Similarity=0.286  Sum_probs=38.9

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      .+++|.+.+|... |..|.+++..++.+|.+++++..   ++.+++.++.+|++.+
T Consensus       161 ~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~~  212 (339)
T 1rjw_A          161 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI---GDEKLELAKELGADLV  212 (339)
T ss_dssp             TCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHTTCSEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHHCCCCEE
Confidence            4667766666665 67999999999999987655433   4677778888999754

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=88.07  E-value=3.6  Score=34.26  Aligned_cols=57  Identities=18%  Similarity=0.230  Sum_probs=41.4

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCC-cEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGY-NLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~-~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      .+...+++|.+.+|.. .|..|.+.+..|+.+|. +++++ .  .++.+++.++.+|++.+.
T Consensus       186 ~~~~~~~~g~~VlV~G-aG~vG~~a~q~a~~~Ga~~Vi~~-~--~~~~~~~~a~~lGa~~vi  243 (378)
T 3uko_A          186 WNTAKVEPGSNVAIFG-LGTVGLAVAEGAKTAGASRIIGI-D--IDSKKYETAKKFGVNEFV  243 (378)
T ss_dssp             HTTTCCCTTCCEEEEC-CSHHHHHHHHHHHHHTCSCEEEE-C--SCTTHHHHHHTTTCCEEE
T ss_pred             HhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEE-c--CCHHHHHHHHHcCCcEEE
Confidence            3556778886766654 58999999999999999 45554 3  234577788899997644

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=88.07  E-value=8.5  Score=30.54  Aligned_cols=30  Identities=20%  Similarity=0.367  Sum_probs=22.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV   98 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv   98 (210)
                      +..+||..+|--|.++|..-...|.+++++
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~   38 (280)
T 3tox_A            9 KIAIVTGASSGIGRAAALLFAREGAKVVVT   38 (280)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467888888888888888877778775554

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=88.05  E-value=7.1  Score=30.36  Aligned_cols=72  Identities=14%  Similarity=0.039  Sum_probs=48.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHh
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSAL-RFEEILEKGEEILKK  140 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~  140 (210)
                      +..+|+..+|.-|.++|..-...|.+++++-.... .....+.++..|.++..+..+- +.++..+..++..++
T Consensus         8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            47788999999999999998899999887765432 2344556677788887766432 234444445555444

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=88.05  E-value=8.1  Score=30.16  Aligned_cols=54  Identities=24%  Similarity=0.405  Sum_probs=34.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.++++....+..  ....+.++..|.++..+.
T Consensus         5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~   60 (258)
T 3oid_A            5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVK   60 (258)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            477888888888999998888888887775443321  122333444555555444

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=87.98  E-value=2.3  Score=33.83  Aligned_cols=31  Identities=19%  Similarity=0.201  Sum_probs=25.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      +..+|+..+|.-|.++|..-...|.+++++.
T Consensus        45 k~vlITGasggIG~~la~~L~~~G~~V~~~~   75 (285)
T 2c07_A           45 KVALVTGAGRGIGREIAKMLAKSVSHVICIS   75 (285)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSSEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCEEEEEc
Confidence            4678898999999999988877888877743

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=87.95  E-value=7.6  Score=29.76  Aligned_cols=32  Identities=19%  Similarity=0.255  Sum_probs=23.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus        15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r   46 (247)
T 3i1j_A           15 RVILVTGAARGIGAAAARAYAAHGASVVLLGR   46 (247)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEec
Confidence            46788888888888888887777777655543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=87.87  E-value=8.5  Score=30.23  Aligned_cols=34  Identities=18%  Similarity=0.287  Sum_probs=27.3

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +..+|+..+|.-|.++|..-...|.+++++-...
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~   45 (271)
T 3tzq_B           12 KVAIITGACGGIGLETSRVLARAGARVVLADLPE   45 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            4778899999999999998888898877765443

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=87.83  E-value=3  Score=33.06  Aligned_cols=56  Identities=13%  Similarity=0.039  Sum_probs=41.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.........+.++..|.++..+..+
T Consensus        32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D   87 (273)
T 3uf0_A           32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVAD   87 (273)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEec
Confidence            47788999999999999998899999887764332334455666778888776543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=87.71  E-value=3.6  Score=32.61  Aligned_cols=33  Identities=24%  Similarity=0.286  Sum_probs=27.2

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++..+||..+|.-|.++|..-...|.+++++-.
T Consensus        11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~   43 (286)
T 3uve_A           11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDI   43 (286)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEec
Confidence            347788999999999999998888998877644

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=87.69  E-value=4.5  Score=31.47  Aligned_cols=32  Identities=19%  Similarity=0.085  Sum_probs=25.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++..
T Consensus        15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r   46 (266)
T 1xq1_A           15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR   46 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888899999999888878887776654

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=87.69  E-value=6.3  Score=30.98  Aligned_cols=32  Identities=19%  Similarity=0.301  Sum_probs=26.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|......|.+++++..
T Consensus        33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r   64 (279)
T 1xg5_A           33 RLALVTGASGGIGAAVARALVQQGLKVVGCAR   64 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEC
Confidence            47789999999999999988888888777654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=87.57  E-value=6.7  Score=30.74  Aligned_cols=54  Identities=20%  Similarity=0.175  Sum_probs=35.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHH-HHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMER-RIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~-~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|.-|.++|..-...|.+++++........+ .+.++..|.++..+.
T Consensus        35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~   89 (279)
T 3ctm_A           35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYK   89 (279)
T ss_dssp             CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEE
Confidence            477888899999999999888889888777654433222 233344455554443

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=87.55  E-value=4.8  Score=32.86  Aligned_cols=64  Identities=17%  Similarity=0.200  Sum_probs=40.1

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCH
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF  127 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~  127 (210)
                      .+...+++|.+.+|. .+|..|...+..++.+ |.+++++.+   ++.|++..+.+|++.+.-..+.++
T Consensus       156 l~~~~~~~g~~VlV~-GaG~~g~~a~~~a~~~~g~~Vi~~~~---~~~r~~~~~~~Ga~~~i~~~~~~~  220 (348)
T 4eez_A          156 IKVSGVKPGDWQVIF-GAGGLGNLAIQYAKNVFGAKVIAVDI---NQDKLNLAKKIGADVTINSGDVNP  220 (348)
T ss_dssp             HHHHTCCTTCEEEEE-CCSHHHHHHHHHHHHTSCCEEEEEES---CHHHHHHHHHTTCSEEEEC-CCCH
T ss_pred             ecccCCCCCCEEEEE-cCCCccHHHHHHHHHhCCCEEEEEEC---cHHHhhhhhhcCCeEEEeCCCCCH
Confidence            344456777665554 5566665555566554 777666543   567888999999987765544333

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=87.48  E-value=4.8  Score=31.70  Aligned_cols=32  Identities=22%  Similarity=0.324  Sum_probs=26.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus        22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r   53 (267)
T 1vl8_A           22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASR   53 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            47788999999999999888888888776654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=87.46  E-value=8.5  Score=29.75  Aligned_cols=34  Identities=12%  Similarity=0.124  Sum_probs=27.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +..+|+..+|.-|.++|..-...|.+++++....
T Consensus        13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~   46 (265)
T 2o23_A           13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPN   46 (265)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence            4778899999999999998888898877765543

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=87.42  E-value=9.7  Score=30.37  Aligned_cols=31  Identities=19%  Similarity=0.243  Sum_probs=24.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      +..+|+..+|--|.++|..-...|.+++++.
T Consensus        50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~   80 (294)
T 3r3s_A           50 RKALVTGGDSGIGRAAAIAYAREGADVAINY   80 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            4778888888899999888777787766543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=87.39  E-value=4.2  Score=31.91  Aligned_cols=32  Identities=19%  Similarity=0.304  Sum_probs=24.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.
T Consensus        11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r   42 (262)
T 3pk0_A           11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGR   42 (262)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888888888888887777887666543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=87.39  E-value=4.9  Score=32.28  Aligned_cols=33  Identities=24%  Similarity=0.367  Sum_probs=26.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|--|.++|..-...|.+++++...
T Consensus        42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~   74 (293)
T 3rih_A           42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARS   74 (293)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence            467888888888889988888888887776544

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=87.34  E-value=8.5  Score=29.66  Aligned_cols=54  Identities=20%  Similarity=0.278  Sum_probs=35.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      +..+|+..+|--|.++|..-...|.++++....+..  ....+.++..|.++..+.
T Consensus         5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   60 (246)
T 3osu_A            5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQ   60 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            467888888889999998888889888776543321  122334445555555444

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=87.24  E-value=1.8  Score=35.25  Aligned_cols=57  Identities=26%  Similarity=0.376  Sum_probs=41.2

Q ss_pred             HcCCCCCCC-eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGK-TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~-~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      ++..++++. +.+|...+|..|.+++..|+.+|.+++++.+.   +.+++.++.+|++.+.
T Consensus       142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~~i  199 (328)
T 1xa0_A          142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK---AAEHDYLRVLGAKEVL  199 (328)
T ss_dssp             HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---TTCHHHHHHTTCSEEE
T ss_pred             hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHcCCcEEE
Confidence            344566764 65666667999999999999999987776654   3456667789986543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=87.21  E-value=5.3  Score=31.10  Aligned_cols=32  Identities=19%  Similarity=0.348  Sum_probs=25.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus        15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   46 (260)
T 2zat_A           15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSR   46 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            47788888999999999888888887776654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=87.15  E-value=6.3  Score=31.12  Aligned_cols=32  Identities=28%  Similarity=0.301  Sum_probs=25.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r   43 (281)
T 3svt_A           12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGR   43 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            47788888899999999888888888766543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=87.14  E-value=2.1  Score=35.36  Aligned_cols=50  Identities=16%  Similarity=0.250  Sum_probs=37.4

Q ss_pred             CeEEEeeCCCchHHHH-HHHH-HHcCCc-EEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           69 KTTLIEVTSGNTGVGL-AFIA-AARGYN-LIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        69 ~~~vv~~ssGN~g~al-A~~a-~~~g~~-~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      .+.+|... |..|... +..| +.+|.+ ++++.+......+++.++.+|++.+
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v  226 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV  226 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc
Confidence            56666655 9899988 8889 999998 6666554433347778889999876

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=87.12  E-value=8.8  Score=29.59  Aligned_cols=32  Identities=22%  Similarity=0.163  Sum_probs=26.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r   37 (245)
T 1uls_A            6 KAVLITGAAHGIGRATLELFAKEGARLVACDI   37 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            47789999999999999988888988777654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=87.01  E-value=4.3  Score=31.99  Aligned_cols=33  Identities=21%  Similarity=0.226  Sum_probs=27.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+||..+|--|.++|..-...|.+++++-..
T Consensus        11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~   43 (287)
T 3pxx_A           11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDIC   43 (287)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence            477888899999999999888889887776543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=86.91  E-value=6.8  Score=29.88  Aligned_cols=32  Identities=13%  Similarity=0.253  Sum_probs=25.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.++++...
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~   33 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYA   33 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            36788888899999999988888988777543

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=86.85  E-value=5.9  Score=30.86  Aligned_cols=31  Identities=23%  Similarity=0.435  Sum_probs=24.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      +..+|+..+|--|.++|..-...|.+++++.
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~   35 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNG   35 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEe
Confidence            4678888888899999888777787766553

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=86.81  E-value=8.8  Score=29.75  Aligned_cols=33  Identities=12%  Similarity=0.176  Sum_probs=27.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|--|.++|..-...|.+++++...
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~   40 (257)
T 3tpc_A            8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLK   40 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            477888999999999999988889987776544

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=86.73  E-value=1.8  Score=35.33  Aligned_cols=56  Identities=23%  Similarity=0.378  Sum_probs=40.2

Q ss_pred             HcCCCCCCC-eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           61 DKGLITPGK-TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        61 ~~g~~~~~~-~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      ++..++++. +.+|...+|..|.+++..|+.+|.+++++.+.   +.+++.++.+|++.+
T Consensus       143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~---~~~~~~~~~lGa~~v  199 (330)
T 1tt7_A          143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN---REAADYLKQLGASEV  199 (330)
T ss_dssp             HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESS---SSTHHHHHHHTCSEE
T ss_pred             HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCcEE
Confidence            344566764 66666667999999999999999997776654   335566677888644

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=86.70  E-value=8  Score=29.93  Aligned_cols=31  Identities=32%  Similarity=0.422  Sum_probs=24.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIV   98 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vv   98 (210)
                      ++..+|+..+|--|.++|..-...|.+++++
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~   36 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAADGATVIVS   36 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEE
Confidence            3477888888889999998888888776654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=86.62  E-value=10  Score=29.85  Aligned_cols=55  Identities=16%  Similarity=0.186  Sum_probs=35.2

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEEC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILAD  122 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++..+|+..+|--|.++|..-...|.+++++......  ....+.++..|.++..+.
T Consensus        31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~   87 (271)
T 3v2g_A           31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR   87 (271)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence            3477888888999999998888888887766443211  122333444555555444

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=86.57  E-value=5.5  Score=30.66  Aligned_cols=32  Identities=13%  Similarity=0.165  Sum_probs=25.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.
T Consensus         4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r   35 (235)
T 3l6e_A            4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGR   35 (235)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            36788888899999999888888888666544

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=86.48  E-value=10  Score=29.69  Aligned_cols=55  Identities=16%  Similarity=0.267  Sum_probs=37.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|.-|.++|..-...|.++++.......  ....+.++..|.++..+..
T Consensus        19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (270)
T 3is3_A           19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA   75 (270)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEc
Confidence            477888888889999998888889888776544321  2223445556666665543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=86.32  E-value=4.9  Score=31.35  Aligned_cols=34  Identities=24%  Similarity=0.208  Sum_probs=25.3

Q ss_pred             CeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        69 ~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +..+|+..+  +.-|.++|..-...|.+++++....
T Consensus        21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~   56 (267)
T 3gdg_A           21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASR   56 (267)
T ss_dssp             CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSS
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCc
Confidence            467777777  6788888888888888877765544

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=86.27  E-value=6.7  Score=31.17  Aligned_cols=32  Identities=13%  Similarity=0.171  Sum_probs=25.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++..
T Consensus        19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r   50 (303)
T 1yxm_A           19 QVAIVTGGATGIGKAIVKELLELGSNVVIASR   50 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            47788999999999999888888887666644

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=86.26  E-value=4.8  Score=33.35  Aligned_cols=57  Identities=25%  Similarity=0.223  Sum_probs=40.7

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +...+++|.+.+|.. +|.-|.+.+..|+.+|...++.+.  .++.+++.++.+|++.+.
T Consensus       185 ~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi  241 (373)
T 1p0f_A          185 NTAKVTPGSTCAVFG-LGGVGFSAIVGCKAAGASRIIGVG--THKDKFPKAIELGATECL  241 (373)
T ss_dssp             TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred             hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEC--CCHHHHHHHHHcCCcEEE
Confidence            456678886666654 699999999999999984333333  245677788899996543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=86.21  E-value=3.2  Score=34.32  Aligned_cols=58  Identities=22%  Similarity=0.204  Sum_probs=40.4

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +..+..+++|.+.+|... |..|..++..|+.+|.+++++.+.   +.+++.++.+|++.+.
T Consensus       171 ~l~~~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~---~~~~~~~~~lGa~~v~  228 (360)
T 1piw_A          171 PLVRNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRS---SRKREDAMKMGADHYI  228 (360)
T ss_dssp             HHHHTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESS---STTHHHHHHHTCSEEE
T ss_pred             HHHHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC---HHHHHHHHHcCCCEEE
Confidence            333456778866666655 999999999999999986665543   3355666778886544

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=86.19  E-value=6  Score=31.68  Aligned_cols=33  Identities=21%  Similarity=0.224  Sum_probs=23.9

Q ss_pred             CeEEEeeCCC--chHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSG--NTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssG--N~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|  .-|.++|..-...|.+++++...
T Consensus        31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~   65 (296)
T 3k31_A           31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS   65 (296)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence            3667887776  77888888877778886665543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=86.18  E-value=4.5  Score=34.88  Aligned_cols=55  Identities=16%  Similarity=0.263  Sum_probs=32.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++..+||..+|--|.++|..-...|.+++++-.........+..+..+.+++.++
T Consensus       213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~D  267 (454)
T 3u0b_A          213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLD  267 (454)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECC
T ss_pred             CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEe
Confidence            3467888888888888888877778876655332222222233334455544444

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=86.16  E-value=5.9  Score=30.75  Aligned_cols=32  Identities=31%  Similarity=0.325  Sum_probs=25.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++-.
T Consensus        10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r   41 (261)
T 3n74_A           10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDR   41 (261)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            47788888899999999988888888766643

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=86.10  E-value=9.3  Score=30.10  Aligned_cols=32  Identities=22%  Similarity=0.260  Sum_probs=24.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++-.
T Consensus        28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r   59 (277)
T 4fc7_A           28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASR   59 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            47788888888888888887777887666543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=86.09  E-value=4.9  Score=30.65  Aligned_cols=32  Identities=28%  Similarity=0.311  Sum_probs=25.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r   34 (235)
T 3l77_A            3 KVAVITGASRGIGEAIARALARDGYALALGAR   34 (235)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888898999999888888888666544

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=86.07  E-value=7.6  Score=30.68  Aligned_cols=88  Identities=11%  Similarity=0.171  Sum_probs=46.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCC-CeEE-
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTP-DGYL-  146 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~-~~~~-  146 (210)
                      +..+|+..+|--|.++|..-...|.+++++....                         +...+..+++.+..+ ...+ 
T Consensus        13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~-------------------------~~~~~~~~~l~~~~~~~~~~~   67 (311)
T 3o26_A           13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDV-------------------------TKGHEAVEKLKNSNHENVVFH   67 (311)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH-------------------------HHHHHHHHHHHTTTCCSEEEE
T ss_pred             cEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH-------------------------HHHHHHHHHHHhcCCCceEEE
Confidence            3667777777777777777666666555443321                         112222233322221 1222 


Q ss_pred             cCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCch
Q 028372          147 LRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTG  185 (210)
Q Consensus       147 ~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~G  185 (210)
                      .-...++   ......+..++.+++ +++|.+|..+|..
T Consensus        68 ~~Dl~~~---~~~v~~~~~~~~~~~-g~iD~lv~nAg~~  102 (311)
T 3o26_A           68 QLDVTDP---IATMSSLADFIKTHF-GKLDILVNNAGVA  102 (311)
T ss_dssp             ECCTTSC---HHHHHHHHHHHHHHH-SSCCEEEECCCCC
T ss_pred             EccCCCc---HHHHHHHHHHHHHhC-CCCCEEEECCccc
Confidence            1222233   122244555666666 5799999999975

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=86.04  E-value=4.7  Score=31.36  Aligned_cols=73  Identities=16%  Similarity=0.105  Sum_probs=46.5

Q ss_pred             CCeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHH-HcC-CEEEEECCCCCHHHHHHHHHHHHHhC
Q 028372           68 GKTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLR-ALG-AEIILADSALRFEEILEKGEEILKKT  141 (210)
Q Consensus        68 ~~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~-~~G-a~v~~v~~~~~~~~~~~~a~~~~~~~  141 (210)
                      +++.+|+..+  |.-|.++|..-...|.+++++..........+.+. .+| ..++.++-. +.++..+..++..++.
T Consensus        14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVA-DDAQIDALFASLKTHW   90 (271)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCC-CHHHHHHHHHHHHHHc
Confidence            4577888866  88999999998899999888776644445555553 333 233444432 3455555556665554

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=86.03  E-value=6.5  Score=30.95  Aligned_cols=31  Identities=19%  Similarity=0.203  Sum_probs=24.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      +..+|+..+|--|.++|..-...|.+++++-
T Consensus        28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~   58 (266)
T 3grp_A           28 RKALVTGATGGIGEAIARCFHAQGAIVGLHG   58 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            4778888888889999888888888776654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=85.96  E-value=6.5  Score=30.73  Aligned_cols=32  Identities=28%  Similarity=0.239  Sum_probs=25.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   45 (267)
T 1iy8_A           14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDV   45 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            47788888999999999887777887766544

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=85.93  E-value=5.9  Score=31.18  Aligned_cols=33  Identities=27%  Similarity=0.189  Sum_probs=26.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|.-|.++|..-...|.+++++...
T Consensus         6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~   38 (281)
T 3m1a_A            6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARR   38 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            467888888999999998888889887776554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=85.85  E-value=10  Score=29.81  Aligned_cols=32  Identities=22%  Similarity=0.252  Sum_probs=24.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++..
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r   60 (270)
T 3ftp_A           29 QVAIVTGASRGIGRAIALELARRGAMVIGTAT   60 (270)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888888888888887777877666544

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=85.73  E-value=6.3  Score=31.29  Aligned_cols=32  Identities=19%  Similarity=0.278  Sum_probs=26.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++..
T Consensus        27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r   58 (302)
T 1w6u_A           27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASR   58 (302)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            46788999999999999888888888766644

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=85.71  E-value=3.5  Score=34.12  Aligned_cols=51  Identities=14%  Similarity=0.172  Sum_probs=38.8

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      |++.+|... |..|.+++..++.+|.+++++.+......+++.++.+|++.+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v  231 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY  231 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee
Confidence            767666666 999999999999999977766554323366778888999876

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=85.70  E-value=2.3  Score=34.49  Aligned_cols=54  Identities=26%  Similarity=0.327  Sum_probs=40.3

Q ss_pred             CCCCCC-eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           64 LITPGK-TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        64 ~~~~~~-~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      .++++. +.+|...+|..|.+.+..|+.+|.+++++.+   ++.+++.++.+|++-+.
T Consensus       142 ~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~---~~~~~~~~~~lGa~~vi  196 (324)
T 3nx4_A          142 GIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSG---RESTHGYLKSLGANRIL  196 (324)
T ss_dssp             TCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEES---CGGGHHHHHHHTCSEEE
T ss_pred             ccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeC---CHHHHHHHHhcCCCEEE
Confidence            345532 4556666699999999999999998877765   35678888889987554

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=85.62  E-value=5.8  Score=32.88  Aligned_cols=57  Identities=26%  Similarity=0.271  Sum_probs=40.7

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +...+++|.+.+|.. +|..|.+.+..|+.+|.+.++.+.  .++.+++.++.+|++.+.
T Consensus       189 ~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~lGa~~vi  245 (376)
T 1e3i_A          189 NTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAID--INGEKFPKAKALGATDCL  245 (376)
T ss_dssp             TTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCcEEE
Confidence            456678886666655 699999999999999984333332  245677788889996543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=85.57  E-value=6.8  Score=30.72  Aligned_cols=32  Identities=13%  Similarity=0.270  Sum_probs=25.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++..
T Consensus        12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r   43 (276)
T 1mxh_A           12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYR   43 (276)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            36788888888899988887777887766654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=85.53  E-value=6.4  Score=30.64  Aligned_cols=32  Identities=22%  Similarity=0.191  Sum_probs=25.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   40 (259)
T 4e6p_A            9 KSALITGSARGIGRAFAEAYVREGATVAIADI   40 (259)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            47788888999999999888888888766543

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=85.47  E-value=4.6  Score=31.03  Aligned_cols=32  Identities=19%  Similarity=0.250  Sum_probs=26.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++..
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r   34 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDL   34 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            46788999999999999988888888776654

>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}

Probab=85.23  E-value=4.5  Score=33.21  Aligned_cols=63  Identities=24%  Similarity=0.129  Sum_probs=43.7

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD  122 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~  122 (210)
                      ++.|.+.+|.+..+..=.+|.+.+++.++..+|.+++++.|+.-  ++.-++.++    ..|+.+..+.
T Consensus       138 e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~  206 (307)
T 3tpf_A          138 EWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGY  206 (307)
T ss_dssp             HTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred             HHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEc
Confidence            34565553545555555689999999999999999999999864  333333333    5677777665

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=85.15  E-value=6.4  Score=32.60  Aligned_cols=57  Identities=19%  Similarity=0.209  Sum_probs=40.6

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +...+++|.+.+|.. +|..|.+++..|+.+|.+.++.+.  .++.+++.++.+|++.+.
T Consensus       185 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi  241 (374)
T 2jhf_A          185 KVAKVTQGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVD--INKDKFAKAKEVGATECV  241 (374)
T ss_dssp             TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCSEEE
T ss_pred             hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEc--CCHHHHHHHHHhCCceEe
Confidence            456678886766655 699999999999999984333332  245677778889986443

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=85.08  E-value=7.8  Score=33.06  Aligned_cols=101  Identities=16%  Similarity=0.021  Sum_probs=63.6

Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHcCCC-CCCCeEEEeeCCCchHHHHHHHHHH-cCCcEEEEEcCCCCH-----------
Q 028372           39 ETMEPCSSVKDRIAYSMIKDAEDKGLI-TPGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCSM-----------  105 (210)
Q Consensus        39 E~~~ptGS~K~R~a~~~~~~a~~~g~~-~~~~~~vv~~ssGN~g~alA~~a~~-~g~~~~vvvp~~~~~-----------  105 (210)
                      -+.+|.|.-+.  ....+...+.++.+ ..++..+|+.+++..|.|+|..-.. .|.+++++-......           
T Consensus        19 ~~~hp~gc~~~--v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn   96 (405)
T 3zu3_A           19 VTAHPTGCEAN--VKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYN   96 (405)
T ss_dssp             CCCCHHHHHHH--HHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHH
T ss_pred             cCCCCHHHHHH--HHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchh
Confidence            34577776443  55666777777766 3345678888888899999988888 999988765433221           


Q ss_pred             --HHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 028372          106 --ERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT  141 (210)
Q Consensus       106 --~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~~  141 (210)
                        ...+.++..|.++..+..+- +.++..+...+..++.
T Consensus        97 ~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~  135 (405)
T 3zu3_A           97 SAAFHKFAAQKGLYAKSINGDAFSDEIKQLTIDAIKQDL  135 (405)
T ss_dssp             HHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence              12335677788777665432 2344444555555554

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=85.06  E-value=6.8  Score=32.41  Aligned_cols=57  Identities=18%  Similarity=0.249  Sum_probs=40.7

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +...+++|.+.+|.. +|..|.+.+..|+.+|.+.++.+.  .++.+++.++.+|++.+.
T Consensus       186 ~~~~~~~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~--~~~~~~~~~~~lGa~~vi  242 (374)
T 1cdo_A          186 NTAKVEPGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVD--LNPDKFEKAKVFGATDFV  242 (374)
T ss_dssp             TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEC--SCGGGHHHHHHTTCCEEE
T ss_pred             hccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEc--CCHHHHHHHHHhCCceEE
Confidence            456677886666655 699999999999999994333332  245677788889996543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=85.04  E-value=9.3  Score=29.63  Aligned_cols=33  Identities=27%  Similarity=0.282  Sum_probs=26.3

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++..+|+..+|--|.++|..-...|.+++++..
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   37 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGARVVLADV   37 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            347788999999999999888888888766644

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=85.04  E-value=6.6  Score=30.43  Aligned_cols=33  Identities=30%  Similarity=0.375  Sum_probs=25.2

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++..+|+..+|--|.++|..-...|.+++++-.
T Consensus         9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r   41 (248)
T 3op4_A            9 GKVALVTGASRGIGKAIAELLAERGAKVIGTAT   41 (248)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            347788888888888888888888887766543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=85.03  E-value=7.7  Score=29.61  Aligned_cols=25  Identities=20%  Similarity=0.138  Sum_probs=20.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGY   93 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~   93 (210)
                      +..+|+..+|.-|.++|..-...|.
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~   27 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAAR   27 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcC
Confidence            3678888889999999988777787

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=85.02  E-value=7  Score=31.00  Aligned_cols=31  Identities=16%  Similarity=0.263  Sum_probs=24.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      +..+|+..+|--|.++|..-...|.+++++-
T Consensus        30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~   60 (277)
T 3gvc_A           30 KVAIVTGAGAGIGLAVARRLADEGCHVLCAD   60 (277)
T ss_dssp             CEEEETTTTSTHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence            4778888888899999988888888776654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=84.96  E-value=13  Score=30.12  Aligned_cols=33  Identities=27%  Similarity=0.139  Sum_probs=27.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+||..+|--|.++|..-...|.++++.+..
T Consensus         6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~   38 (324)
T 3u9l_A            6 KIILITGASSGFGRLTAEALAGAGHRVYASMRD   38 (324)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCc
Confidence            367888888999999999988899988877654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=84.88  E-value=5.1  Score=32.15  Aligned_cols=32  Identities=22%  Similarity=0.225  Sum_probs=24.6

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      |+..+||.+++--|.++|..-...|.++++.-
T Consensus        29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~   60 (273)
T 4fgs_A           29 AKIAVITGATSGIGLAAAKRFVAEGARVFITG   60 (273)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE
Confidence            34778888888889988888777777765543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=84.78  E-value=12  Score=29.11  Aligned_cols=33  Identities=9%  Similarity=0.106  Sum_probs=25.2

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++..+|+..+|--|.++|..-...|.+++++-.
T Consensus         8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r   40 (265)
T 3lf2_A            8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCAR   40 (265)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            347788888888899988887777887666543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=84.47  E-value=13  Score=29.05  Aligned_cols=31  Identities=10%  Similarity=0.203  Sum_probs=24.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      +..+|+..+|.-|.++|..-...|.+++++.
T Consensus        26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~   56 (269)
T 3gk3_A           26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSH   56 (269)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence            3667888888888888888877888776654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=84.47  E-value=8.9  Score=30.32  Aligned_cols=33  Identities=15%  Similarity=0.299  Sum_probs=25.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|--|.++|..-...|.+++++...
T Consensus        24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~   56 (288)
T 2x9g_A           24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHN   56 (288)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            467888888888888888877778876666543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=84.45  E-value=5.8  Score=30.67  Aligned_cols=74  Identities=8%  Similarity=0.126  Sum_probs=48.9

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC-C-CHHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHhC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-C-SMERRIVLRALGAEIILADSA-LRFEEILEKGEEILKKT  141 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~-~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~  141 (210)
                      +++.+|+..+|--|.++|..-...|.++++....+ . .....+.++..|.++..+..+ .+.++..+..++..++.
T Consensus        13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            34678888888899999999888899988776332 2 234456667778777665543 23445555556665554

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=84.40  E-value=9.7  Score=31.02  Aligned_cols=55  Identities=25%  Similarity=0.277  Sum_probs=40.6

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           64 LITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~-g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .+++|.+.+|.. +|..|.+.+..|+.+ |.+++++..   ++.+++.++.+|++.+...
T Consensus       168 ~~~~g~~vlv~G-aG~vG~~a~qla~~~g~~~Vi~~~~---~~~~~~~~~~lGa~~~i~~  223 (345)
T 3jv7_A          168 LLGPGSTAVVIG-VGGLGHVGIQILRAVSAARVIAVDL---DDDRLALAREVGADAAVKS  223 (345)
T ss_dssp             GCCTTCEEEEEC-CSHHHHHHHHHHHHHCCCEEEEEES---CHHHHHHHHHTTCSEEEEC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC---CHHHHHHHHHcCCCEEEcC
Confidence            567776655554 599999999999998 666655533   5788889999999766544

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=84.40  E-value=5.1  Score=31.19  Aligned_cols=25  Identities=16%  Similarity=0.102  Sum_probs=18.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGY   93 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~   93 (210)
                      +..+|+..+|--|.++|..-...|.
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~   27 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDK   27 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCC
Confidence            4668888888888888877666653

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=84.39  E-value=6.5  Score=31.00  Aligned_cols=32  Identities=31%  Similarity=0.321  Sum_probs=25.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   38 (280)
T 1xkq_A            7 KTVIITGSSNGIGRTTAILFAQEGANVTITGR   38 (280)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888888999998887777887766644

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=84.38  E-value=7.1  Score=29.81  Aligned_cols=32  Identities=25%  Similarity=0.291  Sum_probs=25.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r   39 (248)
T 2pnf_A            8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGT   39 (248)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888999999999887778887776654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=84.26  E-value=14  Score=29.18  Aligned_cols=33  Identities=21%  Similarity=0.227  Sum_probs=24.7

Q ss_pred             CeEEEeeCC--CchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ss--GN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+  |.-|.++|..-...|.+++++...
T Consensus        22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~   56 (285)
T 2p91_A           22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYAT   56 (285)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence            367788776  788999888877778877766543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=84.21  E-value=15  Score=29.62  Aligned_cols=32  Identities=19%  Similarity=0.204  Sum_probs=26.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+||..+|--|.++|..-...|.+++++-.
T Consensus        47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~   78 (317)
T 3oec_A           47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDL   78 (317)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEec
Confidence            47788888888999999988888998887744

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=83.93  E-value=7.4  Score=31.16  Aligned_cols=32  Identities=28%  Similarity=0.296  Sum_probs=24.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus        27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r   58 (297)
T 1xhl_A           27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGR   58 (297)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888888999998887777887666544

>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A

Probab=83.92  E-value=6.2  Score=32.33  Aligned_cols=62  Identities=16%  Similarity=0.134  Sum_probs=43.5

Q ss_pred             HHcCCCCCCCeEEEeeCC--CchHHHHHHHHHHc-CCcEEEEEcCC--CCHHHHHHHHHcCCEEEEEC
Q 028372           60 EDKGLITPGKTTLIEVTS--GNTGVGLAFIAAAR-GYNLIIVMPST--CSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ss--GN~g~alA~~a~~~-g~~~~vvvp~~--~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++.|.+. |.+..+..-.  +|.+.+++.++.++ |++++++.|+.  .++.-++.++..|+++..+.
T Consensus       144 e~~g~l~-glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~  210 (306)
T 4ekn_B          144 REIGRID-GIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKE  210 (306)
T ss_dssp             HHHSCST-TCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEES
T ss_pred             HHhCCcC-CCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEc
Confidence            3456544 3333333322  68999999999999 99999999985  35555666777888886664

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=83.92  E-value=8.7  Score=30.34  Aligned_cols=32  Identities=19%  Similarity=0.330  Sum_probs=24.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r   60 (272)
T 4dyv_A           29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGR   60 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence            36688888888888888887777887666543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=83.80  E-value=11  Score=32.41  Aligned_cols=99  Identities=15%  Similarity=0.054  Sum_probs=61.2

Q ss_pred             CCCCCchhhHHHHHHHHHHHHcCCCC-CCCeEEEeeCCCchHHHHHHHHHH-cCCcEEEEEcCCCCH-------------
Q 028372           41 MEPCSSVKDRIAYSMIKDAEDKGLIT-PGKTTLIEVTSGNTGVGLAFIAAA-RGYNLIIVMPSTCSM-------------  105 (210)
Q Consensus        41 ~~ptGS~K~R~a~~~~~~a~~~g~~~-~~~~~vv~~ssGN~g~alA~~a~~-~g~~~~vvvp~~~~~-------------  105 (210)
                      ..|.|.++.  ....+....+++.++ .++..+||.+|+--|.|+|..... .|.+++++-.+....             
T Consensus        35 a~p~g~~~~--v~~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~  112 (422)
T 3s8m_A           35 THPLGCERN--VLEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSA  112 (422)
T ss_dssp             CCHHHHHHH--HHHHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHH
T ss_pred             CCchhHHHH--HHHHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhH
Confidence            456665443  334455556677763 456778888888889999998778 999988775443221             


Q ss_pred             HHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 028372          106 ERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT  141 (210)
Q Consensus       106 ~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~~  141 (210)
                      ...+.++..|.++..+..+- +.++..+...+..++.
T Consensus       113 a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~  149 (422)
T 3s8m_A          113 AFDKHAKAAGLYSKSINGDAFSDAARAQVIELIKTEM  149 (422)
T ss_dssp             HHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            12356677898877665432 2344444455555544

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=83.78  E-value=12  Score=28.90  Aligned_cols=30  Identities=13%  Similarity=0.246  Sum_probs=23.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV   98 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv   98 (210)
                      +..+|+..+|.-|.++|..-...|.+++++
T Consensus         7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~   36 (253)
T 1hxh_A            7 KVALVTGGASGVGLEVVKLLLGEGAKVAFS   36 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467888888999999998877778776655

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=83.74  E-value=6.5  Score=31.10  Aligned_cols=30  Identities=20%  Similarity=0.163  Sum_probs=23.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV   98 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv   98 (210)
                      +..+|+..+|.-|.++|..-...|.+++++
T Consensus        30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~   59 (276)
T 2b4q_A           30 RIALVTGGSRGIGQMIAQGLLEAGARVFIC   59 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence            477888889999999998877778776554

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=83.73  E-value=8.8  Score=30.44  Aligned_cols=31  Identities=26%  Similarity=0.446  Sum_probs=23.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      +..+|+..+|--|.++|..-...|.+++++-
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~   64 (281)
T 4dry_A           34 RIALVTGGGTGVGRGIAQALSAEGYSVVITG   64 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            3678888888888888887777787766554

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=83.60  E-value=8.4  Score=30.73  Aligned_cols=54  Identities=17%  Similarity=0.096  Sum_probs=40.2

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADS  123 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +.+|+..+|+.|.+++......|.+++++..... ....+..+...|.+++..+-
T Consensus        13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl   67 (318)
T 2r6j_A           13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGEL   67 (318)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCT
T ss_pred             eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecC
Confidence            5788888999999999998888999999887653 33334444556777766653

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=83.54  E-value=8.8  Score=30.04  Aligned_cols=32  Identities=28%  Similarity=0.294  Sum_probs=24.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++-.
T Consensus        21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r   52 (266)
T 4egf_A           21 KRALITGATKGIGADIARAFAAAGARLVLSGR   52 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888888888888887777887666544

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=83.45  E-value=11  Score=29.74  Aligned_cols=32  Identities=19%  Similarity=0.167  Sum_probs=25.6

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.
T Consensus         6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r   37 (281)
T 3zv4_A            6 EVALITGGASGLGRALVDRFVAEGARVAVLDK   37 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence            47788888898999999888888887776543

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=83.44  E-value=5.4  Score=33.13  Aligned_cols=55  Identities=25%  Similarity=0.255  Sum_probs=39.5

Q ss_pred             cCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           62 KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        62 ~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +..+++|.+.+|.+ +|..|.+.+..|+.+|.+++++..   ++.+++.++.+|++.+.
T Consensus       189 ~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~Vi~~~~---~~~~~~~a~~lGa~~vi  243 (369)
T 1uuf_A          189 HWQAGPGKKVGVVG-IGGLGHMGIKLAHAMGAHVVAFTT---SEAKREAAKALGADEVV  243 (369)
T ss_dssp             HTTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEE
T ss_pred             hcCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC---CHHHHHHHHHcCCcEEe
Confidence            33567776666654 588999999999999998555543   35566777788986544

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=83.35  E-value=6.8  Score=32.36  Aligned_cols=56  Identities=16%  Similarity=0.235  Sum_probs=40.3

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCc-EEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYN-LIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~-~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +...+++|.+.+|.. +|..|...+..|+.+|.. ++++.+   ++.+++.++.+|++.+.
T Consensus       184 ~~~~~~~g~~VlV~G-aG~vG~~avqla~~~Ga~~Vi~~~~---~~~~~~~~~~lGa~~vi  240 (373)
T 2fzw_A          184 NTAKLEPGSVCAVFG-LGGVGLAVIMGCKVAGASRIIGVDI---NKDKFARAKEFGATECI  240 (373)
T ss_dssp             TTTCCCTTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECS---CGGGHHHHHHHTCSEEE
T ss_pred             hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcC---CHHHHHHHHHcCCceEe
Confidence            456677886766655 699999999999999984 444322   45677778889986543

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=83.30  E-value=10  Score=27.39  Aligned_cols=22  Identities=23%  Similarity=0.288  Sum_probs=13.7

Q ss_pred             HhHHHHHHHhhCCCCCEEEEccCc
Q 028372          161 ETTGPEIWQDSGGKVDAFISGIGT  184 (210)
Q Consensus       161 ~t~~~Ei~~q~~~~~d~vv~pvG~  184 (210)
                      ..+..++.+++ +. |.+|.+.|+
T Consensus        86 ~~~~~~i~~~~-G~-dVLVnnAgg  107 (157)
T 3gxh_A           86 EAFFAAMDQHK-GK-DVLVHCLAN  107 (157)
T ss_dssp             HHHHHHHHHTT-TS-CEEEECSBS
T ss_pred             HHHHHHHHhcC-CC-CEEEECCCC
Confidence            34444555556 45 888888875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=83.23  E-value=11  Score=29.68  Aligned_cols=72  Identities=15%  Similarity=0.159  Sum_probs=48.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK  140 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~  140 (210)
                      +..+||..+|.-|.++|..-...|.++++.......  ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus        28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            377899999999999999988889998886554432  23345566778887766543 2344444445555444

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=83.15  E-value=15  Score=28.94  Aligned_cols=30  Identities=27%  Similarity=0.413  Sum_probs=24.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIV   98 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vv   98 (210)
                      +..+|+..+|--|.++|..-...|.+++++
T Consensus        26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~   55 (281)
T 3v2h_A           26 KTAVITGSTSGIGLAIARTLAKAGANIVLN   55 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            467888888989999998888888776654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=83.15  E-value=8.5  Score=29.99  Aligned_cols=72  Identities=14%  Similarity=0.164  Sum_probs=47.4

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK  140 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~  140 (210)
                      +..+|+..+|--|.++|..-...|.+++++......  ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            477889899999999999988899998887554432  23345566677766655443 2244444445555444

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=83.01  E-value=9.4  Score=30.17  Aligned_cols=32  Identities=13%  Similarity=0.165  Sum_probs=25.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.
T Consensus        28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r   59 (277)
T 4dqx_A           28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADV   59 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence            47788888899999999888888888776543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=83.00  E-value=14  Score=28.54  Aligned_cols=32  Identities=25%  Similarity=0.335  Sum_probs=25.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   39 (263)
T 3ai3_A            8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR   39 (263)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence            46788999999999999888888887766644

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=82.86  E-value=8.3  Score=29.99  Aligned_cols=32  Identities=16%  Similarity=0.172  Sum_probs=25.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++.+|+..+|.-|.++|..-...|.+++++..
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   44 (263)
T 3ak4_A           13 RKAIVTGGSKGIGAAIARALDKAGATVAIADL   44 (263)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            47788999999999999888888887766543

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=82.82  E-value=5  Score=33.60  Aligned_cols=66  Identities=29%  Similarity=0.342  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHH-cCC-CCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           50 RIAYSMIKDAED-KGL-ITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        50 R~a~~~~~~a~~-~g~-~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      |+..+.+..+.+ .|. .-.| ++|+....||-|..+|..++.+|.+++ +.+.+  +.+.+..+.+|++.+
T Consensus       155 ~Gv~~~~~~~~~~~G~~~L~G-ktV~I~G~GnVG~~~A~~l~~~GakVv-vsD~~--~~~~~~a~~~ga~~v  222 (355)
T 1c1d_A          155 VGVFEAMKATVAHRGLGSLDG-LTVLVQGLGAVGGSLASLAAEAGAQLL-VADTD--TERVAHAVALGHTAV  222 (355)
T ss_dssp             HHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTTCEEE-EECSC--HHHHHHHHHTTCEEC
T ss_pred             HHHHHHHHHHHHhcCCCCCCC-CEEEEECcCHHHHHHHHHHHHCCCEEE-EEeCC--ccHHHHHHhcCCEEe
Confidence            566666666543 453 2234 667778899999999999999999887 55443  233444556777654

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=82.75  E-value=18  Score=29.56  Aligned_cols=58  Identities=17%  Similarity=0.216  Sum_probs=38.9

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      +.+...+++|.+.+|.+ +|..|.+....|+.+|.+.++.+.  .++.+++.++.++.+++
T Consensus       171 ~l~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~--~~~~~~~~a~~l~~~~~  228 (363)
T 3m6i_A          171 GLQRAGVRLGDPVLICG-AGPIGLITMLCAKAAGACPLVITD--IDEGRLKFAKEICPEVV  228 (363)
T ss_dssp             HHHHHTCCTTCCEEEEC-CSHHHHHHHHHHHHTTCCSEEEEE--SCHHHHHHHHHHCTTCE
T ss_pred             HHHHcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEC--CCHHHHHHHHHhchhcc
Confidence            33455677887766654 599999999999999997333332  24667777777643444

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=82.70  E-value=15  Score=28.48  Aligned_cols=32  Identities=25%  Similarity=0.285  Sum_probs=23.3

Q ss_pred             CeEEEeeCCC-chHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSG-NTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssG-N~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+| .-|.++|..-...|.+++++-.
T Consensus        23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r   55 (266)
T 3o38_A           23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDY   55 (266)
T ss_dssp             CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCCchHHHHHHHHHHCCCEEEEecC
Confidence            3667777666 5899998888888888666544

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=82.51  E-value=16  Score=28.64  Aligned_cols=32  Identities=25%  Similarity=0.264  Sum_probs=26.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.
T Consensus        12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r   43 (277)
T 3tsc_A           12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDI   43 (277)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEec
Confidence            47788888898999999988888998877654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=82.39  E-value=15  Score=28.34  Aligned_cols=33  Identities=21%  Similarity=0.231  Sum_probs=24.9

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++..+|+..+|--|.++|..-...|.+++++-.
T Consensus        12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r   44 (252)
T 3f1l_A           12 DRIILVTGASDGIGREAAMTYARYGATVILLGR   44 (252)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            347788888888888888887777877666543

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=81.98  E-value=10  Score=29.31  Aligned_cols=33  Identities=21%  Similarity=0.334  Sum_probs=25.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|--|.++|..-...|.+++++...
T Consensus         8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~   40 (264)
T 3i4f_A            8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS   40 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCC
Confidence            367888888888888888888888887776544

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=81.86  E-value=6.7  Score=30.99  Aligned_cols=54  Identities=17%  Similarity=0.226  Sum_probs=38.4

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC-C--CH-HHHH---HHHHcCCEEEEECC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST-C--SM-ERRI---VLRALGAEIILADS  123 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~-~--~~-~~~~---~~~~~Ga~v~~v~~  123 (210)
                      +.+|+..+|..|.+++......|.+++++.... .  .+ .+.+   .+...|.+++..+-
T Consensus         4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~   64 (307)
T 2gas_A            4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI   64 (307)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCT
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCC
Confidence            668888999999999999888899999888754 1  12 3332   33445777766653

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=81.84  E-value=15  Score=27.97  Aligned_cols=49  Identities=14%  Similarity=0.171  Sum_probs=31.7

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ..++....|..|..+|..-...|. ++++ ..+  +.+.+.++ .|.+++.-+.
T Consensus        10 ~~viI~G~G~~G~~la~~L~~~g~-v~vi-d~~--~~~~~~~~-~~~~~i~gd~   58 (234)
T 2aef_A           10 RHVVICGWSESTLECLRELRGSEV-FVLA-EDE--NVRKKVLR-SGANFVHGDP   58 (234)
T ss_dssp             CEEEEESCCHHHHHHHHHSTTSEE-EEEE-SCG--GGHHHHHH-TTCEEEESCT
T ss_pred             CEEEEECCChHHHHHHHHHHhCCe-EEEE-ECC--HHHHHHHh-cCCeEEEcCC
Confidence            346667789999999988877787 5444 332  34445555 6766655443

>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}

Probab=81.61  E-value=11  Score=31.44  Aligned_cols=62  Identities=19%  Similarity=0.199  Sum_probs=42.8

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHH----HHcCCEEEEEC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVL----RALGAEIILAD  122 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~----~~~Ga~v~~v~  122 (210)
                      ++.|.++ |.+..+..-.+|.+.+++.+++.+|++++++.|+.-  ++.-++.+    +..|+++..+.
T Consensus       172 E~~G~l~-glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~  239 (340)
T 4ep1_A          172 EETNTFK-GIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH  239 (340)
T ss_dssp             HHHSCCT-TCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES
T ss_pred             HHhCCCC-CCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC
Confidence            3456544 335445555589999999999999999999999864  33333333    36788887765

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=81.40  E-value=10  Score=29.59  Aligned_cols=32  Identities=16%  Similarity=0.130  Sum_probs=25.7

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   39 (260)
T 1nff_A            8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDI   39 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            47788999999999999888778887766543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=81.36  E-value=2.4  Score=33.37  Aligned_cols=26  Identities=15%  Similarity=0.344  Sum_probs=23.8

Q ss_pred             CCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           77 SGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        77 sGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      ||-.|.++|.++...|.+++++..+.
T Consensus        28 SG~mG~aiA~~~~~~Ga~V~lv~~~~   53 (232)
T 2gk4_A           28 TGHLGKIITETLLSAGYEVCLITTKR   53 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            89999999999999999999998654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=81.24  E-value=8.8  Score=29.86  Aligned_cols=33  Identities=12%  Similarity=0.179  Sum_probs=26.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      ++..+|+..+|--|.++|..-...|.+++++-.
T Consensus         8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r   40 (255)
T 4eso_A            8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGR   40 (255)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            347788888999999999988888988776644

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=81.21  E-value=13  Score=28.86  Aligned_cols=32  Identities=22%  Similarity=0.229  Sum_probs=26.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus        17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r   48 (278)
T 2bgk_A           17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADI   48 (278)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC
Confidence            47788999999999999988888887766643

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=81.17  E-value=17  Score=28.01  Aligned_cols=33  Identities=12%  Similarity=0.081  Sum_probs=27.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|.-|.++|..-...|.+++++...
T Consensus         8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~   40 (250)
T 2fwm_X            8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQA   40 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence            477899999999999999988889988877654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=81.13  E-value=5.3  Score=31.05  Aligned_cols=55  Identities=15%  Similarity=0.071  Sum_probs=39.2

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcC---CcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARG---YNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g---~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|.-|.++|......|   .+++++.........++.+...+.++..+..
T Consensus        22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~   79 (267)
T 1sny_A           22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEI   79 (267)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEEC
T ss_pred             CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEe
Confidence            467888888999999999988889   8888887665443444555444666655543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=80.91  E-value=17  Score=28.03  Aligned_cols=33  Identities=18%  Similarity=0.114  Sum_probs=26.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS  101 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~  101 (210)
                      +..+|+..+|.-|.++|..-...|.+++++...
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   39 (256)
T 2d1y_A            7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLR   39 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence            477899999999999998888888877666543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=80.89  E-value=5.7  Score=30.28  Aligned_cols=51  Identities=22%  Similarity=0.273  Sum_probs=38.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCC-EEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGA-EIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga-~v~~v~  122 (210)
                      ++.+|+..+|.-|.+++......|.+++++....   .+...+...+. +++..+
T Consensus        22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~---~~~~~~~~~~~~~~~~~D   73 (236)
T 3e8x_A           22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE---EQGPELRERGASDIVVAN   73 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG---GGHHHHHHTTCSEEEECC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh---HHHHHHHhCCCceEEEcc
Confidence            4778999999999999999989999999987653   23444444566 666554

>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A

Probab=80.88  E-value=12  Score=30.78  Aligned_cols=61  Identities=16%  Similarity=0.200  Sum_probs=42.8

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD  122 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~  122 (210)
                      +.|.++ |.+..+..-.+|.+.+++.+++.+|++++++.|+.-  ++.-.+.++    ..|+++..+.
T Consensus       149 ~~g~l~-gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~  215 (315)
T 1pvv_A          149 KKGTIK-GVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLH  215 (315)
T ss_dssp             HHSCCT-TCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEES
T ss_pred             HhCCcC-CcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence            456554 334444444489999999999999999999999865  332333333    6788887775

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=80.83  E-value=9.2  Score=30.19  Aligned_cols=55  Identities=18%  Similarity=0.122  Sum_probs=41.0

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+|+..+|--|.++|..-...|.+++++-.... .....+.++..|.++..+..
T Consensus        34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~   89 (275)
T 4imr_A           34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAG   89 (275)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEe
Confidence            47788888888999999998889999887765433 34455666777887776654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=80.48  E-value=11  Score=28.89  Aligned_cols=32  Identities=19%  Similarity=0.211  Sum_probs=25.5

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|.-|.++|..-...|.+++++..
T Consensus         7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r   38 (251)
T 1zk4_A            7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGR   38 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            46788888899999999887778888766654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=80.42  E-value=12  Score=29.05  Aligned_cols=32  Identities=22%  Similarity=0.318  Sum_probs=25.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      +..+|+..+|--|.++|..-...|.+++++..
T Consensus         8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r   39 (250)
T 3nyw_A            8 GLAIITGASQGIGAVIAAGLATDGYRVVLIAR   39 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence            47788888888999988887777887666543

>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...

Probab=80.40  E-value=8.1  Score=31.69  Aligned_cols=62  Identities=18%  Similarity=0.123  Sum_probs=43.1

Q ss_pred             HHcCCCCCCCeEEEeeCC--CchHHHHHHHHHHc-CCcEEEEEcCCC--CHHHHHHHHHcCCEEEEEC
Q 028372           60 EDKGLITPGKTTLIEVTS--GNTGVGLAFIAAAR-GYNLIIVMPSTC--SMERRIVLRALGAEIILAD  122 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ss--GN~g~alA~~a~~~-g~~~~vvvp~~~--~~~~~~~~~~~Ga~v~~v~  122 (210)
                      ++.|.++ |.+..+..-.  +|.+.+++.++.++ |++++++.|+.-  ++...+.++..|+++..+.
T Consensus       147 e~~g~l~-gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~  213 (310)
T 3csu_A          147 ETQGRLD-NLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHS  213 (310)
T ss_dssp             HHHSCSS-SCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECS
T ss_pred             HHhCCcC-CcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEc
Confidence            3456554 3343333332  69999999999999 999999999854  4445566777888876654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=80.24  E-value=26  Score=31.24  Aligned_cols=55  Identities=18%  Similarity=0.117  Sum_probs=37.1

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ++..+||..++--|.++|......|.++++. .........+.++..|.+++.+..
T Consensus       322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~-~~~~~~~~~~~i~~~g~~~~~~~~  376 (604)
T 2et6_A          322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVN-DFKDATKTVDEIKAAGGEAWPDQH  376 (604)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEE-CSSCCHHHHHHHHHTTCEEEEECC
T ss_pred             CCeEEEECcchHHHHHHHHHHHHCCCEEEEE-eCccHHHHHHHHHhcCCeEEEEEc
Confidence            3466788888888888888888889887664 222234445556666777766653

>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1

Probab=80.05  E-value=14  Score=30.49  Aligned_cols=61  Identities=13%  Similarity=0.180  Sum_probs=41.6

Q ss_pred             HcCCCCCCCeEEEeeCC-CchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHH----HcCCEEEEEC
Q 028372           61 DKGLITPGKTTLIEVTS-GNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLR----ALGAEIILAD  122 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ss-GN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~----~~Ga~v~~v~  122 (210)
                      +.|.++ |.+..+..-. +|.+.+++.++..+|++++++.|+.-  ++.-.+.++    ..|+++..+.
T Consensus       161 ~~g~l~-gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~  228 (325)
T 1vlv_A          161 NFGRLK-GVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTS  228 (325)
T ss_dssp             HHSCST-TCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEES
T ss_pred             HhCCcC-CcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence            456554 3333333333 69999999999999999999999854  333333343    7788887775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	210
d1z7wa1	320	c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (C	2e-52
d1jbqa_	355	c.79.1.1 (A:) Cystathionine beta-synthase {Human (	1e-46
d1y7la1	310	c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (C	3e-45
d1ve1a1	302	c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (C	6e-44
d1fcja_	302	c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cystei	4e-42
d1o58a_	293	c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cystei	4e-39
d2bhsa1	292	c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (C	1e-36
d1tdja1	331	c.79.1.1 (A:5-335) Threonine deaminase {Escherichi	1e-28
d1wkva1	382	c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (C	1e-26
d1v71a1	318	c.79.1.1 (A:6-323) Hypothetical protein C320.14 (S	2e-25
d1tyza_	338	c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de	5e-20
d1ve5a1	310	c.79.1.1 (A:2-311) Threonine deaminase {Thermus th	9e-20
d1e5xa_	477	c.79.1.1 (A:) Threonine synthase {Mouse-ear cress	1e-19
d1p5ja_	319	c.79.1.1 (A:) L-serine dehydratase {Human (Homo sa	9e-17
d1j0aa_	325	c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de	2e-16
d1f2da_	341	c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate de	3e-16
d1v7ca_	351	c.79.1.1 (A:) Threonine synthase {Thermus thermoph	4e-14
d1v8za1	386	c.79.1.1 (A:1-386) Tryptophan synthase, beta-subun	7e-14
d1qopb_	390	c.79.1.1 (B:) Tryptophan synthase, beta-subunit {S	1e-11

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 320

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  169 bits (428), Expect = 2e-52
 Identities = 138/197 (70%), Positives = 165/197 (83%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I +DVTELIGNTP+VYLNNV +GCV R+AAKLE MEPCSSVKDRI +SMI DAE KGLI 
Sbjct: 3   IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIK 62

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG++ LIE TSGNTGVGLAF AAA+GY LII MP++ S ERRI+L A G E++L D A  
Sbjct: 63  PGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKG 122

Query: 127 FEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG 186
            +  + K EEIL KTP+GY+L+QFENPANPKIHYETTGPEIW+ +GGK+D F+SGIGTGG
Sbjct: 123 MKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGG 182

Query: 187 TVTGAGRFLKENNPDIK 203
           T+TGAG++LKE N ++K
Sbjct: 183 TITGAGKYLKEQNANVK 199

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (392), Expect = 1e-46
 Identities = 91/208 (43%), Positives = 123/208 (59%), Gaps = 6/208 (2%)

Query: 3   DNNAIKRDVTELIGNTPMVYLNNVVD--GCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
            +  I  D+ + IG+TPMV +N +    G    + AK E      SVKDRI+  MI+DAE
Sbjct: 30  KSPKILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAE 89

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
             G + PG T +IE TSGNTG+GLA  AA RGY  IIVMP   S E+  VLRALGAEI+ 
Sbjct: 90  RDGTLKPGDT-IIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVR 148

Query: 121 ADSALRF---EEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDA 177
             +  RF   E  +     +  + P+ ++L Q+ N +NP  HY+TT  EI Q   GK+D 
Sbjct: 149 TPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDM 208

Query: 178 FISGIGTGGTVTGAGRFLKENNPDIKVV 205
            ++ +GTGGT+TG  R LKE  P  +++
Sbjct: 209 LVASVGTGGTITGIARKLKEKCPGCRII 236

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} Length = 310

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

 Score =  150 bits (379), Expect = 3e-45
 Identities = 87/196 (44%), Positives = 123/196 (62%), Gaps = 4/196 (2%)

Query: 6   AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLI 65
           AI  D +  IGNTP+V L +        +  K+E   P  SVK RI  +M+  AE  G +
Sbjct: 1   AIYADNSYSIGNTPLVRLKHFGHNG--NVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTL 58

Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSAL 125
           T GK   ++ TSGNTG+ LA++AAARGY + + MP T S+ER+ +L  LG  ++L + A 
Sbjct: 59  TKGKEI-VDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAK 117

Query: 126 RFEEILEKGEEILKKT-PDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGT 184
             +  + K EEI+        +L+QFENPANP+IH ETTGPEIW+D+ GKVD  ++G+GT
Sbjct: 118 GMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGT 177

Query: 185 GGTVTGAGRFLKENNP 200
           GG++TG  R +K +  
Sbjct: 178 GGSITGISRAIKLDFG 193

>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]} Length = 302

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermus thermophilus [TaxId: 274]

 Score =  146 bits (369), Expect = 6e-44
 Identities = 95/197 (48%), Positives = 132/197 (67%), Gaps = 2/197 (1%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGK- 69
           V   IG TP+V L  VV+  +A +  KLE + P  S+KDR A+ MIKDAE++G++ PG  
Sbjct: 3   VEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSG 62

Query: 70  TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEE 129
             ++E TSGNTG+GLA IAA+RGY LI+ MP+  S ER+ VL+A GAE++L D   R   
Sbjct: 63  QVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLA 122

Query: 130 ILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT 189
             E+   + ++        QF+NPAN + HYETTGPE+++   G++DAF+ G GTGGT+T
Sbjct: 123 AREEALRLKEELGAFM-PDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTIT 181

Query: 190 GAGRFLKENNPDIKVVL 206
           G GR+LKE  P +KV+ 
Sbjct: 182 GVGRYLKERIPHVKVIA 198

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} Length = 302

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

 Score =  141 bits (357), Expect = 4e-42
 Identities = 96/196 (48%), Positives = 133/196 (67%), Gaps = 5/196 (2%)

Query: 7   IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLIT 66
           I  D +  IG+TP+V LN + +    RI AK+E+  P  SVK RI  +MI DAE +G++ 
Sbjct: 3   IYEDNSLTIGHTPLVRLNRIGN---GRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLK 59

Query: 67  PGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALR 126
           PG    +E T+GNTG+ LA++AAARGY L + MP T S+ERR +L+ALGA ++L + A  
Sbjct: 60  PGVEL-VEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKG 118

Query: 127 FEEILEKGEEILKKT-PDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTG 185
            +  ++K EEI+        LL+QF NPANP+IH +TTGPEIW+D+ G+VD FISG+GTG
Sbjct: 119 MKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTG 178

Query: 186 GTVTGAGRFLKENNPD 201
           GT+TG  R++K     
Sbjct: 179 GTLTGVTRYIKGTKGK 194

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]} Length = 293

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

 Score =  134 bits (337), Expect = 4e-39
 Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 8/192 (4%)

Query: 10  DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGK 69
            +  LIG+TP+V L+++     +RI  KLE   P  SVKDR A  MI DAE +GL+  G 
Sbjct: 3   MMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLKNG- 57

Query: 70  TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEE 129
             ++E TSGN G+ +A I A RG+ +I+ MP T S+ERR VL+ LGAE++L    L  + 
Sbjct: 58  --IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKG 115

Query: 130 ILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVT 189
            +EK  EI ++T   ++L QFENP N   H  TTGPEI +    ++DAF++G+GTGGT++
Sbjct: 116 AVEKALEISRETG-AHMLNQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTIS 174

Query: 190 GAGRFLKENNPD 201
           G GR LK    +
Sbjct: 175 GVGRVLKGFFGN 186

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} Length = 292

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

 Score =  127 bits (320), Expect = 1e-36
 Identities = 89/195 (45%), Positives = 118/195 (60%), Gaps = 2/195 (1%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKT 70
           + + IGNTP+V L  +     + +  KLE   P  SVKDR A SMI +AE +G I PG  
Sbjct: 3   LEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDV 62

Query: 71  TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEI 130
             IE TSGNTG+ LA IAA +GY + ++MP   S ERR  +RA GAE+IL       E  
Sbjct: 63  L-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA 121

Query: 131 LEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTG 190
            +   E+     +G LL QF NP NP  HY TTGPEIWQ +GG++  F+S +GT GT+TG
Sbjct: 122 RDLALEM-ANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITG 180

Query: 191 AGRFLKENNPDIKVV 205
             RF++E +  + +V
Sbjct: 181 VSRFMREQSKPVTIV 195

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} Length = 331

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

 Score =  107 bits (268), Expect = 1e-28
 Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 9/195 (4%)

Query: 11  VTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKT 70
           V E    TP+  +  +       I  K E  +P  S K R AY+M+    ++        
Sbjct: 21  VYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQ----KAH 76

Query: 71  TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEI 130
            +I  ++GN   G+AF +A  G   +IVMP+  +  +   +R  G E++L        + 
Sbjct: 77  GVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHG---ANFDE 133

Query: 131 LEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTG 190
            +     L +      +  F++P    I  + T           +D     +G GG   G
Sbjct: 134 AKAKAIELSQQQGFTWVPPFDHP--MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAG 191

Query: 191 AGRFLKENNPDIKVV 205
               +K+  P IKV+
Sbjct: 192 VAVLIKQLMPQIKVI 206

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 382

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score =  102 bits (256), Expect = 1e-26
 Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 12/201 (5%)

Query: 13  ELIGN---TPMVYLNNVV-DGCVARIAAKLETMEPCS-SVKDRIAYSMIKDAEDKGLITP 67
           +       TP+V     + +G   R+  KLE   P S SVKDR A  +I     +  +  
Sbjct: 88  DFFERGKPTPLVRSRLQLPNGV--RVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEK 143

Query: 68  GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF 127
           G + + + TS N GV L+ +A   GY   + +P       +++ R LGA++I+   A   
Sbjct: 144 G-SLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPST 202

Query: 128 EEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ--DSGGKVDAFISGIGTG 185
             +L +  +  K     ++ + + +         T      Q    G  +      +GT 
Sbjct: 203 VHLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTS 262

Query: 186 GTVTGAGRFLKENNPDIKVVL 206
           G ++ A  +L+  +P I+ VL
Sbjct: 263 GHMSAAAFYLQSVDPSIRAVL 283

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 318

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 98.8 bits (245), Expect = 2e-25
 Identities = 38/203 (18%), Positives = 83/203 (40%), Gaps = 9/203 (4%)

Query: 2   EDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAED 61
           +D  +    + +    TP++  + V    VA +  K E  +   + K R A + +    +
Sbjct: 6   DDVASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNE 65

Query: 62  KGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA 121
                  K  ++  +SGN    +A  A   G    I+MP      +    +  G ++I+ 
Sbjct: 66  A----QRKAGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMY 121

Query: 122 DSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISG 181
           D     ++  +  +EI ++  +G  +    +  +      T   E++++  G +DA    
Sbjct: 122 DR--YKDDREKMAKEISER--EGLTIIPPYDHPHVLAGQGTAAKELFEE-VGPLDALFVC 176

Query: 182 IGTGGTVTGAGRFLKENNPDIKV 204
           +G GG ++G+    +   P+ +V
Sbjct: 177 LGGGGLLSGSALAARHFAPNCEV 199

>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Pseudomonas sp., strain ACP [TaxId: 306]} Length = 338

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Pseudomonas sp., strain ACP [TaxId: 306]

 Score = 84.0 bits (206), Expect = 5e-20
 Identities = 34/213 (15%), Positives = 58/213 (27%), Gaps = 23/213 (10%)

Query: 11  VTELIGNTPMVYLNNVVD--GCVARIAAKLETMEPCSSV---KDRIAYSMIKDAEDKGLI 65
                G TP+  L  +    G    + AK E      +    K R    +I +A  +G  
Sbjct: 9   YPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCD 68

Query: 66  TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL----- 120
           T      I     N    +A +AA  G   ++V  +  +    +  R    ++       
Sbjct: 69  TLV---SIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGAD 125

Query: 121 -----ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW-----QD 170
                    + F    E   E ++               +P       G          +
Sbjct: 126 VRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAE 185

Query: 171 SGGKVDAFISGIGTGGTVTGAGRFLKENNPDIK 203
            G K D  +    TG T  G       +    +
Sbjct: 186 LGFKFDYVVVCSVTGSTQAGMVVGFAADGRADR 218

>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]} Length = 310

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Thermus thermophilus [TaxId: 274]

 Score = 83.1 bits (204), Expect = 9e-20
 Identities = 47/207 (22%), Positives = 81/207 (39%), Gaps = 12/207 (5%)

Query: 1   MEDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAE 60
           ++D  A  R +      TP++    +      R+  K E ++   S K R A S     E
Sbjct: 3   LQDLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALE 62

Query: 61  DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL 120
                      L+ V+SGN   G+A+ A   G   ++VMP   S  ++   RA GAE++ 
Sbjct: 63  -------NPKGLLAVSSGNHAQGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVD 115

Query: 121 ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ--DSGGKVDAF 178
                   +  E+    L++     L+  F++P             + Q    G    A 
Sbjct: 116 RG---VTAKNREEVARALQEETGYALIHPFDDPLVIAGQGTAGLELLAQAGRMGVFPGAV 172

Query: 179 ISGIGTGGTVTGAGRFLKENNPDIKVV 205
           ++ +G GG + G    +K  +P   V+
Sbjct: 173 LAPVGGGGLLAGLATAVKALSPTTLVL 199

>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 477

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 84.3 bits (207), Expect = 1e-19
 Identities = 25/193 (12%), Positives = 57/193 (29%), Gaps = 5/193 (2%)

Query: 11  VTELIGNTPMVYLNNVVD--GCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPG 68
           V+   GN+ + +          +  +  K   +    S KD     ++        +   
Sbjct: 115 VSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRP 174

Query: 69  KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE 128
              +   ++G+T   L+   A+ G   I+ +P+   +    +++ +     +      F+
Sbjct: 175 VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANK-ISMAQLVQPIANGAFVLSIDTDFD 233

Query: 129 EILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV 188
             ++   EI         L    N    +         + Q      D  I   G  G +
Sbjct: 234 GCMKLIREI--TAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNI 291

Query: 189 TGAGRFLKENNPD 201
               +  K     
Sbjct: 292 YAFYKGFKMCQEL 304

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 319

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (182), Expect = 9e-17
 Identities = 35/191 (18%), Positives = 60/191 (31%), Gaps = 7/191 (3%)

Query: 14  LIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLI 73
           L   TP+     +       +  K+++ +P  S K R      K    +     G    +
Sbjct: 4   LHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQ-----GCAHFV 58

Query: 74  EVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEK 133
             ++GN G+  A+ A   G    IV+P T        L+  GA           +E  E 
Sbjct: 59  CSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCK--VVGELLDEAFEL 116

Query: 134 GEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGR 193
            + + K  P    +  F++P   + H                   +S  G G        
Sbjct: 117 AKALAKNNPGWVYIPPFDDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQG 176

Query: 194 FLKENNPDIKV 204
             +    D+ V
Sbjct: 177 LQECGWGDVPV 187

>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 325

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 74.3 bits (181), Expect = 2e-16
 Identities = 40/202 (19%), Positives = 68/202 (33%), Gaps = 10/202 (4%)

Query: 5   NAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETM--EPCSSVKDRIAYSMIKDAEDK 62
               R V  +   TP+ YL N+     A +  K + +        K R    ++ DA  K
Sbjct: 10  AKFPR-VELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSK 68

Query: 63  GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD 122
           G         +     N        A   G + I+V+     ++   +L  +        
Sbjct: 69  GADVVI---TVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVY 125

Query: 123 SALRFEEILEKGEEI----LKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAF 178
            A    E+++  EEI     ++    Y++          + Y     EI   S  K D+ 
Sbjct: 126 DAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLGYVRAVGEIATQSEVKFDSI 185

Query: 179 ISGIGTGGTVTGAGRFLKENNP 200
           +   G+GGT+ G    L   N 
Sbjct: 186 VVAAGSGGTLAGLSLGLSILNE 207

>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Yeast (Hansenula saturnus) [TaxId: 4906]} Length = 341

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Yeast (Hansenula saturnus) [TaxId: 4906]

 Score = 73.6 bits (179), Expect = 3e-16
 Identities = 29/215 (13%), Positives = 53/215 (24%), Gaps = 30/215 (13%)

Query: 11  VTELIGNTPMVYLNNVVD--GCVARIAAKLETMEPCSSV---KDRIAYSMIKDAEDKGLI 65
                G +P+  LN +    G    + AK E      +    K R    ++ D  +    
Sbjct: 9   YPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGD-- 66

Query: 66  TPGKTTLIEVTS--GNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL--- 120
               T L+ +     N    +A +AA  G   +++      +             I    
Sbjct: 67  ---YTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSR 123

Query: 121 ------------ADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHY---ETTGP 165
                        D  +R        E          +           + +        
Sbjct: 124 IMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYPIPAGCSEHKYGGLGFVGFADEVI 183

Query: 166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP 200
               + G K D  +    TG T  G    + +   
Sbjct: 184 NQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGR 218

>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]} Length = 351

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Thermus thermophilus [TaxId: 274]

 Score = 67.8 bits (164), Expect = 4e-14
 Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 11/195 (5%)

Query: 11  VTELIGNTPMVYLNNVV--DGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPG 68
           ++ L G+TP++ L           R+ AK E + P  S KDR     +  A +      G
Sbjct: 22  ISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVE-----GG 76

Query: 69  KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE 128
              +   ++GNT    A  AA  G   I+V+P+      ++    +    I+       +
Sbjct: 77  AQAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNFDD 136

Query: 129 EILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGGTV 188
            +    +                   +     +T   E+  + G         +G  G +
Sbjct: 137 ALRLTQKLTEAFPVA----LVNSVNPHRLEGQKTLAFEVVDELGDAPHYHALPVGNAGNI 192

Query: 189 TGAGRFLKENNPDIK 203
           T      K  +   K
Sbjct: 193 TAHWMGYKAYHALGK 207

>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 386

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

 Score = 67.2 bits (163), Expect = 7e-14
 Identities = 40/202 (19%), Positives = 68/202 (33%), Gaps = 18/202 (8%)

Query: 18  TPMVYLNNVVDGC-VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVT 76
           TP+ Y   + +    A+I  K E +    + K   A      A+  G        + E  
Sbjct: 51  TPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMG----KTRLIAETG 106

Query: 77  SGNTGVGLAFIAAARGYNLIIVMPSTC---SMERRIVLRALGAEIILADSALR-----FE 128
           +G  GV  A   A  G  + I M +            ++ LGA +I  +S  R       
Sbjct: 107 AGQHGVATAMAGALLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAIN 166

Query: 129 EILEKGEEILKKT--PDGYLLRQFENPANPKIHYETTGPEI---WQDSGGKVDAFISGIG 183
           E L       + T    G ++     P   +      G E      ++ G++   I    
Sbjct: 167 EALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGREAKAQILEAEGQLPDVIVACV 226

Query: 184 TGGTVTGAGRFLKENNPDIKVV 205
            GG+      +   N+  +K+V
Sbjct: 227 GGGSNAMGIFYPFVNDKKVKLV 248

>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]} Length = 390

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Salmonella typhimurium [TaxId: 90371]

 Score = 60.6 bits (146), Expect = 1e-11
 Identities = 34/203 (16%), Positives = 58/203 (28%), Gaps = 21/203 (10%)

Query: 18  TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTS 77
           T +    N+  G    +  K E +    + K          A+  G       T     +
Sbjct: 56  TALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEIIAET----GA 111

Query: 78  GNTGVGLAFIAAARGYNLIIVMPSTCSM---ERRIVLRALGAEIILADSALRFEEILEKG 134
           G  GV  A  +A  G    I M +            +R +GAE+I   S      + +  
Sbjct: 112 GQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSG--SATLKDAC 169

Query: 135 EEILKKTPD---------GYLLRQFENPANPKIHYETTGPEI---WQDSGGKVDAFISGI 182
            E L+             G        P   +      G E      D  G++   +   
Sbjct: 170 NEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIAC 229

Query: 183 GTGGTVTGAGRFLKENNPDIKVV 205
             GG+          N+  + ++
Sbjct: 230 VGGGSNAIGMFADFINDTSVGLI 252

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	210
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1ve1a1	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	100.0
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	100.0
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	100.0
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	100.0
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	100.0
d1ve5a1	310	Threonine deaminase {Thermus thermophilus [TaxId:	100.0
d1v7ca_	351	Threonine synthase {Thermus thermophilus [TaxId: 2	100.0
d1e5xa_	477	Threonine synthase {Mouse-ear cress (Arabidopsis t	100.0
d1v8za1	386	Tryptophan synthase, beta-subunit {Archaeon Pyroco	100.0
d1qopb_	390	Tryptophan synthase, beta-subunit {Salmonella typh	100.0
d1j0aa_	325	1-aminocyclopropane-1-carboxylate deaminase {Archa	100.0
d1tyza_	338	1-aminocyclopropane-1-carboxylate deaminase {Pseud	100.0
d1f2da_	341	1-aminocyclopropane-1-carboxylate deaminase {Yeast	99.97
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	99.81
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	99.33
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.03
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.87
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.55
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.51
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.49
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.03
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.0
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.63
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.6
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	95.53
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.49
d1vp8a_	190	Hypothetical protein AF0103 {Archaeoglobus fulgidu	95.44
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	95.43
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.42
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	95.42
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	95.22
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.2
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	95.0
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.78
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	94.69
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	94.2
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.19
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	94.14
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	93.7
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	93.67
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	93.64
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	93.51
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	93.48
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	93.36
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	93.23
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	93.17
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	93.17
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	93.14
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	93.14
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	93.06
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	92.81
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	92.75
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	92.7
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	92.64
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	92.6
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	92.57
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	92.45
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	92.37
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	92.34
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	92.26
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	91.98
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	91.89
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	91.72
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.64
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	91.57
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	91.38
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	91.36
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	91.14
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	90.99
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	90.92
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	90.79
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	90.73
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	90.7
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	90.48
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	90.45
d1t57a_	186	Hypothetical protein MTH1675 {Methanobacterium the	90.36
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	90.19
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	89.07
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	88.98
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	88.95
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	88.91
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	88.69
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	88.58
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	88.4
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	87.9
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	87.38
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	86.8
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	86.78
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	86.27
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	85.98
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	85.95
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	84.82
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	84.49
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	84.37
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	83.59
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	83.57
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	83.28
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	83.07
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	82.99
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	81.81
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	81.6
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	81.18
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	80.97
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	80.9
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	80.37
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	80.36
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	80.26
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	80.14
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	80.06

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.8e-51  Score=346.06  Aligned_cols=202  Identities=68%  Similarity=1.130  Sum_probs=186.0

Q ss_pred             hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      +.+.|.+.+++|||+++++|++.+|.+||+|+|++|||||||+|++.+++..|+++|.++++...|+++|+||||.|+|+
T Consensus         3 i~~~i~~~iG~TPLv~~~~l~~~~g~~i~~K~E~~nptGSfKdRgA~~~i~~a~~~g~~~~~~~~vv~aSsGN~g~a~A~   82 (320)
T d1z7wa1           3 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAF   82 (320)
T ss_dssp             CCSSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHH
T ss_pred             hhhhhhhhcCCCCeEECCCcccccCCEEEEEeCCCCCccCcHHHHHHHHHHHHHHcCCCCCCCceEEeeCCchHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999988887788999999999999999


Q ss_pred             HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHH
Q 028372           87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPE  166 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~E  166 (210)
                      +|+.+|++|++|+|+++++.|+++++.+||+|+.++...+..+....+.+...+.++++|+++|+|+.|+..||.|++.|
T Consensus        83 ~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~g~~t~~~E  162 (320)
T d1z7wa1          83 TAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPE  162 (320)
T ss_dssp             HHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEEECCTTTCTHHHHHHHHTHHHH
T ss_pred             HHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHhCCCceecccccccchHHHhhhhHHHH
Confidence            99999999999999999999999999999999999865434444455555556667899999999999989999999999


Q ss_pred             HHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          167 IWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       167 i~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      |++|+.++||+||+|+|+||+++|++++|+..+|++++|+|.
T Consensus       163 I~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         163 IWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             HHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence            999997789999999999999999999999999999999985

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=100.00  E-value=1.4e-50  Score=336.20  Aligned_cols=197  Identities=46%  Similarity=0.744  Sum_probs=183.4

Q ss_pred             hhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372           10 DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA   89 (210)
Q Consensus        10 ~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~   89 (210)
                      .|.+.|++|||+++++|++.+|++||+|+|++|||||||+|++.+++..+.++|.+.++ .+|+++|+||||+|+|++|+
T Consensus         2 ~i~~~IG~TPL~~~~~l~~~~g~~iy~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~-~~vv~aSsGN~g~a~A~~a~   80 (292)
T d2bhsa1           2 TLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPG-DVLIEATSGNTGIALAMIAA   80 (292)
T ss_dssp             CGGGGSSCCCEEECSSSSCCSSCEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTSCCTT-SEEEEECCSHHHHHHHHHHH
T ss_pred             chhcccCCCceEECCccChhhCCEEEEEeCCCCCCCCcHHHHHHHHHHHHHHhCCcCCC-ceeeeecccchhHHHHHHHH
Confidence            47889999999999999999999999999999999999999999999999999987765 67999999999999999999


Q ss_pred             HcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHH
Q 028372           90 ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ  169 (210)
Q Consensus        90 ~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  169 (210)
                      .+|++|+||+|+++++.|+++|+.+||+|+.++.+.+..++...+.+..++. +.+|.+||+|+.++..|+.++++||++
T Consensus        81 ~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~Ei~~  159 (292)
T d2bhsa1          81 LKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG-EGKLLDQFNNPDNPYAHYTTTGPEIWQ  159 (292)
T ss_dssp             HHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT-SSEECCTTTCTHHHHHHHHTHHHHHHH
T ss_pred             hcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc-cccccCCCchhcchhhHHHHHHHHhHH
Confidence            9999999999999999999999999999999997765666666666666665 789999999999988999999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          170 DSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       170 q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      |+++.||+||+|+|+||+++|++.++|+..|+++|++|.
T Consensus       160 q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         160 QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             HTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             hcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence            998789999999999999999999999999999999985

>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.8e-50  Score=333.20  Aligned_cols=198  Identities=48%  Similarity=0.805  Sum_probs=183.7

Q ss_pred             hhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCC-eEEEeeCCCchHHHHHHHH
Q 028372           10 DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGK-TTLIEVTSGNTGVGLAFIA   88 (210)
Q Consensus        10 ~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~-~~vv~~ssGN~g~alA~~a   88 (210)
                      ||...+++|||+++++|++..|++||+|+|++|||||||+|++.+++.+|.++|.+++++ ++|+++|+||||.|+|++|
T Consensus         2 ri~~~ig~TPLi~~~~l~~~~g~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~~~~~vv~~SsGN~g~a~A~~a   81 (302)
T d1ve1a1           2 RVEGAIGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIA   81 (302)
T ss_dssp             CGGGGCCCCCEEECCSSSCTTSCEEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEESCCSHHHHHHHHHH
T ss_pred             cccCccCCCCeEECcccchhhCCEEEEEeCCCCcccCcHHHHHHHHHHHHHHhCCCCCCCCcEEEEecCCcchhhhhhhh
Confidence            578899999999999999999999999999999999999999999999999999877664 6899999999999999999


Q ss_pred             HHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHH
Q 028372           89 AARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIW  168 (210)
Q Consensus        89 ~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~  168 (210)
                      +.+|++|++|+|+..++.+++.++.+|++++.+....+..+....+.+.+++. +++|++||+|+.+++.|+.|++.||+
T Consensus        82 ~~~g~~~~iv~p~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~EI~  160 (302)
T d1ve1a1          82 ASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEEL-GAFMPDQFKNPANVRAHYETTGPELY  160 (302)
T ss_dssp             HHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHH-TCBCCCTTTCHHHHHHHHHTHHHHHH
T ss_pred             hccCcceeEeeecccchheeehhhhhhhcchhcccccchHHHHHHhhhhhhcc-CccccccCccchhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998655566666666666665 89999999999998889999999999


Q ss_pred             HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          169 QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       169 ~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +|++++||+||+|+|+||+++|++.+|+..+|+++||||.
T Consensus       161 ~q~~~~~d~vv~~vG~Gg~~~Gi~~~~~~~~~~~~iigve  200 (302)
T d1ve1a1         161 EALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVE  200 (302)
T ss_dssp             HHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HHcCCCCCeEEEeecCcHHHHHHHHHHHhcCCCCEEEEEE
Confidence            9998789999999999999999999999999999999985

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-49  Score=335.78  Aligned_cols=202  Identities=44%  Similarity=0.670  Sum_probs=180.3

Q ss_pred             hhhHhhhccccCCceeecccccCCCC--ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG   83 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~a   83 (210)
                      .+++.|.+.|++|||+++++|++.+|  ++||+|+|++|||||||+|++.+++.+|.++|.++++ ++|+++|+||||.|
T Consensus        33 ~~~~~i~~~IG~TPLv~l~~ls~~~G~~~~i~~K~E~~nptGSfKdRga~~~i~~a~~~g~~~~~-~~vv~aSsGN~g~a  111 (355)
T d1jbqa_          33 KILPDILKKIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRISLRMIEDAERDGTLKPG-DTIIEPTSGNTGIG  111 (355)
T ss_dssp             SEESSGGGGSSCCCEEECCSHHHHTTCCSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHHTCSCTT-CEEEEECSSHHHHH
T ss_pred             cccccHHHhcCCCCcEECcchhHHhCCCCEEEEEECCCCCccCHHHHHHHHHHHHHHHcCCcccC-ceEEEecccchhhH
Confidence            45778899999999999999998776  6899999999999999999999999999999987765 67999999999999


Q ss_pred             HHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHH---HHHHHHHHHHHhCCCeEEcCCCCCChhHHHHH
Q 028372           84 LAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE---EILEKGEEILKKTPDGYLLRQFENPANPKIHY  160 (210)
Q Consensus        84 lA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~  160 (210)
                      +|++|+++|++|++|+|..+++.|++.|+.+||+|+.++......   +....+.+...+.+..+|.+++.|+.++++||
T Consensus       112 ~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ag~  191 (355)
T d1jbqa_         112 LALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLKNEIPNSHILDQYRNASNPLAHY  191 (355)
T ss_dssp             HHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHHHHSTTEECCCTTTCTHHHHHHH
T ss_pred             HHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHHHhccccccccccCcccchhhhc
Confidence            999999999999999999999999999999999999998643322   23344555555666889999999999988999


Q ss_pred             HhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          161 ETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       161 ~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      .|++.||++|++++||+||+|+|+||+++|++.+|++.+|+++||+|.
T Consensus       192 ~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~ve  239 (355)
T d1jbqa_         192 DTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVD  239 (355)
T ss_dssp             HTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             ccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeec
Confidence            999999999998889999999999999999999999999999999985

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.6e-48  Score=322.91  Aligned_cols=193  Identities=46%  Similarity=0.681  Sum_probs=175.6

Q ss_pred             hHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFI   87 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~   87 (210)
                      |++|...+++|||+++++++    .+||+|+|++|||||||+|++.+++.++.++|..+   ..|+++|+||||.|+|++
T Consensus         1 ~~~i~~~ig~TPL~~~~~l~----~~i~~K~E~~nptGSfK~Rga~~~i~~a~~~g~~~---~~vv~~SsGN~g~a~A~~   73 (293)
T d1o58a_           1 HHMMERLIGSTPIVRLDSID----SRIFLKLEKNNPGGSVKDRPALFMILDAEKRGLLK---NGIVEPTSGNMGIAIAMI   73 (293)
T ss_dssp             CCHHHHHSCCCCEEECTTTC----TTEEEEEGGGSTTSBTTHHHHHHHHHHHHHTTCCT---TCEEEECSSHHHHHHHHH
T ss_pred             CchhhhhcCCCCcEECCCCC----CEEEEEECCCCCccChHHHHHHHHHHHHHHcCCCC---cceEEecCcchhhHHHHh
Confidence            46788999999999998764    57999999999999999999999999999998754   449999999999999999


Q ss_pred             HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHH
Q 028372           88 AAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEI  167 (210)
Q Consensus        88 a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei  167 (210)
                      |+.+|++|++|+|+++++.|+++++.+||+|+.++.+.+.......+.+++++. +++|++||+|+.+++.|+.|++.||
T Consensus        74 a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~Ei  152 (293)
T d1o58a_          74 GAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRET-GAHMLNQFENPYNVYSHQFTTGPEI  152 (293)
T ss_dssp             HHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHH-CCBCCCTTTCHHHHHHHHHTHHHHH
T ss_pred             hhhccceeEeeccccccHHHeeccccCCcEEEEecCcchhhHHHHHHHHHHhcc-CCEEeeeccccceeeeccccHHHhh
Confidence            999999999999999999999999999999999987655566667777777776 7899999999998888999999999


Q ss_pred             HHhhCCCCCEEEEccCchhHHHHHHHHHHhcCC-CCEEEEEE
Q 028372          168 WQDSGGKVDAFISGIGTGGTVTGAGRFLKENNP-DIKVVLRV  208 (210)
Q Consensus       168 ~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~-~~~vigv~  208 (210)
                      ++|++++||+||+|+|+||+++|++.+||+.++ ++++|+|.
T Consensus       153 ~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~k~~~~~~~~ii~ve  194 (293)
T d1o58a_         153 LKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVE  194 (293)
T ss_dssp             HHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEE
T ss_pred             hhhcCCCCCEEEEecCcchhHHHHHHHHHHHCCCCCeEEEEe
Confidence            999988899999999999999999999998755 59999985

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=4.3e-49  Score=330.54  Aligned_cols=197  Identities=19%  Similarity=0.298  Sum_probs=181.6

Q ss_pred             chhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHH
Q 028372            3 DNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGV   82 (210)
Q Consensus         3 ~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~   82 (210)
                      ++..++++|.+++++|||+++++|++.+|.+||+|+|++|||||||+|++.+++.++.+.+.    ...|+++|+||||.
T Consensus         7 di~~a~~ri~~~i~~TPl~~~~~l~~~~g~~i~~K~E~~nptGSfKdRga~~~~~~~~~~~~----~~~vv~~ssGN~g~   82 (318)
T d1v71a1           7 DVASASERIKKFANKTPVLTSSTVNKEFVAEVFFKCENFQKMGAFKFRGALNALSQLNEAQR----KAGVLTFSSGNHAQ   82 (318)
T ss_dssp             HHHHHHHHHTTTSCCCCEECCHHHHHHHTSEEEEEEGGGSGGGBTHHHHHHHHHTTCCHHHH----HHCEEECCSSHHHH
T ss_pred             HHHHHHHHHhccCCCCCEEEchhhhHHHCCEEEEEeCCCCCCCCHHHHHHHHHHHHhhhccc----cceeeeeccchhhH
Confidence            35678999999999999999999998889999999999999999999999999988765543    35699999999999


Q ss_pred             HHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHh
Q 028372           83 GLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYET  162 (210)
Q Consensus        83 alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t  162 (210)
                      ++|++|+.+|++|++|+|++.++.++++|+.+||+|+.++..  ++++...+++++++. +++|++||+||.+ ..||.|
T Consensus        83 a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~--~~~~~~~a~~~a~~~-g~~~~~~~~~~~~-~~g~~t  158 (318)
T d1v71a1          83 AIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRY--KDDREKMAKEISERE-GLTIIPPYDHPHV-LAGQGT  158 (318)
T ss_dssp             HHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTT--TTCHHHHHHHHHHHH-TCBCCCSSSSHHH-HHHHTH
T ss_pred             HHHHhhcccccceeecccccccHHHHHHHHHcCCcEEeccCC--chHHHHHHHHHHHhc-CCEecCCcccccc-ccccch
Confidence            999999999999999999999999999999999999999864  567777888888876 7999999999987 689999


Q ss_pred             HHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          163 TGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       163 ~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +++||++|+ +++|+||+|+|+||+++|++.++|..+|+++|++|.
T Consensus       159 ~~~Ei~~q~-~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~~~ii~v~  203 (318)
T d1v71a1         159 AAKELFEEV-GPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVE  203 (318)
T ss_dssp             HHHHHHHHH-CCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCCceeeccc
Confidence            999999999 579999999999999999999999999999999985

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=100.00  E-value=3e-47  Score=318.70  Aligned_cols=199  Identities=43%  Similarity=0.700  Sum_probs=176.3

Q ss_pred             hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      ++++++..|++|||++++.++.  +.+||+|+|++|||||||+|++.+++.+|.++|.+.++ ++|+++|+||||.|+|+
T Consensus         2 ~y~~~~~~ig~TPLv~~~~l~~--~~~I~lK~E~~nptGSfK~RgA~~~i~~a~~~g~~~~~-~~vv~~SsGN~g~a~A~   78 (310)
T d1y7la1           2 IYADNSYSIGNTPLVRLKHFGH--NGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKG-KEIVDATSGNTGIALAY   78 (310)
T ss_dssp             CCSSGGGGCCCCCEEECSSSSS--TTCEEEEETTSSGGGBTHHHHHHHHHHHHHHTTSSCTT-CEEEESCCSHHHHHHHH
T ss_pred             ccchhhhhcCCCCeEECCCCCC--CCEEEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCCC-ceeeeecCCCchHHHHH
Confidence            5788999999999999998875  57899999999999999999999999999999988876 67999999999999999


Q ss_pred             HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HHHHHhCCCeEEcCCCCCChhHHHHHHhHHH
Q 028372           87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKG-EEILKKTPDGYLLRQFENPANPKIHYETTGP  165 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a-~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~  165 (210)
                      +|+++|++|++|+|+++++.|+++++.+||+|+.++++.+..+..... ....+...+.+|+++++|+.+...|+.+++.
T Consensus        79 ~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  158 (310)
T d1y7la1          79 VAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGP  158 (310)
T ss_dssp             HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTTEECCCTTTCTHHHHHHHHTHHH
T ss_pred             HHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhhcCccccCCCCcchhhHHHhhhhHHH
Confidence            999999999999999999999999999999999999753333333322 2233334478999999999998889999999


Q ss_pred             HHHHhhCCCCCEEEEccCchhHHHHHHHHHHh-cCCCCEEEEEE
Q 028372          166 EIWQDSGGKVDAFISGIGTGGTVTGAGRFLKE-NNPDIKVVLRV  208 (210)
Q Consensus       166 Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~-~~~~~~vigv~  208 (210)
                      ||++|+++.||+||+|+|+||+++|++.++|. ..|++++++|.
T Consensus       159 Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk~~~~~~~~~i~ve  202 (310)
T d1y7la1         159 EIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVE  202 (310)
T ss_dssp             HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEE
T ss_pred             HHHHhcCCCCCEEEecCcCCcchhHHHHHHHHhhcccceecccc
Confidence            99999987899999999999999999999985 78999999985

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=6.4e-47  Score=323.67  Aligned_cols=201  Identities=27%  Similarity=0.343  Sum_probs=176.4

Q ss_pred             chhhhhHhhhcccc---CCceeecccccCCCCceEEEEeCCCCCCC-chhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCC
Q 028372            3 DNNAIKRDVTELIG---NTPMVYLNNVVDGCVARIAAKLETMEPCS-SVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSG   78 (210)
Q Consensus         3 ~~~~~~~~i~~~~~---~TPl~~~~~l~~~~~~~i~~K~E~~~ptG-S~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssG   78 (210)
                      |.+.++++..+.++   ||||+++ ++....|++||+|+|++|||| |||||++.+++.+|.++  ++++ .+|+++|+|
T Consensus        78 ~~~~~~~~~l~~~~~~~PTPLvrl-~l~~~~G~~IylKlE~~NPtGgSfKdR~A~~~i~~A~~~--~~~g-~~VVeaSSG  153 (382)
T d1wkva1          78 PGEMVFPSPLDFFERGKPTPLVRS-RLQLPNGVRVWLKLEWYNPFSLSVKDRPAVEIISRLSRR--VEKG-SLVADATSS  153 (382)
T ss_dssp             CTTCEESSHHHHHHHSCSCCEEEC-CCCCSTTEEEEEEEGGGSTTTSBTTHHHHHHHHHHHTTT--SCTT-CEEEEECCH
T ss_pred             CcceEeCCHHHHhcCCCCCCEEEC-CCCCCCCCEEEEEecCCCCCCCccHHHHHHHHHHHHHhc--cCCC-CEEEEeCCc
Confidence            44567777777774   4999998 466677899999999999986 99999999999998643  4455 569999999


Q ss_pred             chHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHH
Q 028372           79 NTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKI  158 (210)
Q Consensus        79 N~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~  158 (210)
                      |||+|+|++|+.+|++|++|+|+++++.|++.|+.+||+|+.++...+..++..++.+.+++. +++|++||+|+.++..
T Consensus       154 N~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~~~~~~~~~~~~a~~~a~~~-~~~~~~q~~N~~~~~~  232 (382)
T d1wkva1         154 NFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNE-GFVHVNQFYNDANFEA  232 (382)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHH-CCEECCTTTCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeecCcchhhHHHHHHHhhhcccc-Cccccccccccceeee
Confidence            999999999999999999999999999999999999999999987554555556666666665 7899999999999999


Q ss_pred             HHHhHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          159 HYETTGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       159 g~~t~~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      ||.|++.||++|++   ..+|+||+|+|+||+++|++.++|+.+|++++|+|.
T Consensus       233 h~~ttg~EI~eQl~~~~~~~d~vv~~vGtGG~~~Gi~~~lk~~~p~vkiigVe  285 (382)
T d1wkva1         233 HMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQ  285 (382)
T ss_dssp             HHHTHHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhcchHHHHHHhhcCCCceeEEEEecccccccccceeehhhhCCccceeEec
Confidence            99999999999984   368999999999999999999999999999999985

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-46  Score=314.79  Aligned_cols=187  Identities=21%  Similarity=0.228  Sum_probs=175.5

Q ss_pred             ccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCc
Q 028372           15 IGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYN   94 (210)
Q Consensus        15 ~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~   94 (210)
                      ..+|||+++++|++.+|.+||+|+|++|||||||+|++.+++.++.++|.     ++||++|+||||+|+|++|+.+|++
T Consensus         5 ~~~TPl~~~~~L~~~~g~~i~~K~E~~nptGSfK~R~a~~~~~~a~~~g~-----~~vv~aSsGN~g~a~A~~a~~~G~~   79 (319)
T d1p5ja_           5 HVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRWAKQGC-----AHFVCSSAGNAGMAAAYAARQLGVP   79 (319)
T ss_dssp             SCCCCEEEEHHHHHHHTSCEEEECGGGSGGGBTTHHHHHHHHHHHHHTTC-----CEEEECCSSHHHHHHHHHHHHHTCC
T ss_pred             ceeCCcEEhHHhHHHHCCEEEEEeCCCCCCCCcHHHHHHHHHHHHHHcCC-----CEEEEeCCCcHHHHHHHHhhhcccc
Confidence            34799999999998889999999999999999999999999999999885     6799999999999999999999999


Q ss_pred             EEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHHhhCCC
Q 028372           95 LIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQDSGGK  174 (210)
Q Consensus        95 ~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~q~~~~  174 (210)
                      |++|+|+++++.|++.++.+|++|+.++.  +++++.+.+++++++.++++|+++|+|+.+ +.|+.+++.||++|+.+.
T Consensus        80 ~~i~~p~~~~~~k~~~~~~~Ga~v~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~g~~~~~~Ei~~q~~~~  156 (319)
T d1p5ja_          80 ATIVVPGTTPALTIERLKNEGATCKVVGE--LLDEAFELAKALAKNNPGWVYIPPFDDPLI-WEGHASIVKELKETLWEK  156 (319)
T ss_dssp             EEEEECTTCCHHHHHHHHHTTCEEEECCS--CHHHHHHHHHHHHHHSTTEEECCSSCCHHH-HHHHTHHHHHHHHHCSSC
T ss_pred             ceeccccccccccccccccceeccccccc--cchhHHHHHHHHhhccCccccccccccccc-ccccchhhhhhhccccCC
Confidence            99999999999999999999999999986  489999999999988878999999999998 789999999999999878


Q ss_pred             CCEEEEccCchhHHHHHHHHHHhcC-CCCEEEEEEe
Q 028372          175 VDAFISGIGTGGTVTGAGRFLKENN-PDIKVVLRVL  209 (210)
Q Consensus       175 ~d~vv~pvG~Gg~~~Gi~~~~k~~~-~~~~vigv~~  209 (210)
                      ||++|+|+|+||+++|++.++++.. |++++|+|..
T Consensus       157 ~d~vv~~vg~Gg~~~g~~~~~~~~~~~~~~~i~ve~  192 (319)
T d1p5ja_         157 PGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMET  192 (319)
T ss_dssp             CSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEE
T ss_pred             CceeeecccCCcchhhhHHHHHHhccCCeeeeeccc
Confidence            9999999999999999999999865 8999999863

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.5e-47  Score=318.51  Aligned_cols=190  Identities=26%  Similarity=0.364  Sum_probs=176.3

Q ss_pred             hhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372           10 DVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA   89 (210)
Q Consensus        10 ~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~   89 (210)
                      ++.+.+++|||+++++|++.+|.+||+|+|++|||||||+|++.+++..+.+++.    ..+|+++|+||||.|+|++|+
T Consensus        20 ~v~~~~~~TPL~~~~~L~~~lg~~i~~K~E~~nptGS~KdRga~~~i~~~~~~~~----~~~vv~assGN~g~a~A~~a~   95 (331)
T d1tdja1          20 PVYEAAQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQK----AHGVITASAGNHAQGVAFSSA   95 (331)
T ss_dssp             CGGGTCCCCCEEECHHHHHHTTSEEEEECGGGSTTSSSTHHHHHHHHHTTTTSSC----SSSCEEEECSSSHHHHHHHHH
T ss_pred             ccceeccCCceeEHHHhhHHHCCEEEEEECCCCCCCChHHHHHHHHHHHHHHhCC----CCeeeecccchhHHHHHHhhc
Confidence            5778899999999999999999999999999999999999999999998876654    366999999999999999999


Q ss_pred             HcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHHHHHHH
Q 028372           90 ARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTGPEIWQ  169 (210)
Q Consensus        90 ~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~~Ei~~  169 (210)
                      .+|++|++|+|+..+..|++.|+.+||+|+.++.+  +++....+++++++. +++|+++++||.+ +.||.|++.||++
T Consensus        96 ~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~g~~t~~~Ei~~  171 (331)
T d1tdja1          96 RLGVKALIVMPTATADIKVDAVRGFGGEVLLHGAN--FDEAKAKAIELSQQQ-GFTWVPPFDHPMV-IAGQGTLALELLQ  171 (331)
T ss_dssp             HTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSS--HHHHHHHHHHHHHHH-CCEECCSSCCHHH-HHHHHHHHHHHHH
T ss_pred             cccccceeeccccchhHHHHHHHhcCCEEEEcCcc--cccchhhhhhhhhcC-CCccccccCChHH-hhhhhhHHHHHHH
Confidence            99999999999999999999999999999999864  677777888887776 8999999999998 7899999999999


Q ss_pred             hhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          170 DSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       170 q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      |. ++||+||+|+|+||+++|++.+|++.+|+++||+|.
T Consensus       172 q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         172 QD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HC-TTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hc-CCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence            98 579999999999999999999999999999999985

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=100.00  E-value=2.4e-45  Score=305.60  Aligned_cols=196  Identities=47%  Similarity=0.764  Sum_probs=172.2

Q ss_pred             hhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHH
Q 028372            7 IKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAF   86 (210)
Q Consensus         7 ~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~   86 (210)
                      ++++|++.+++|||++++++.   +.+||+|+|++|||||||+|++.+++.++.++|++.++ .+++++|+||||.|+|+
T Consensus         3 ~~~~i~~~ig~TPLi~L~~l~---~~~i~~K~E~~~ptGSfK~Rga~~~i~~a~~~g~~~~~-~~vv~assGn~g~a~A~   78 (302)
T d1fcja_           3 IYEDNSLTIGHTPLVRLNRIG---NGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTNGNTGIALAY   78 (302)
T ss_dssp             EESSGGGGCCCCCEEECSSSS---SSCEEEEETTSSGGGBTHHHHHHHHHHHHHHHTCCCTT-CEEEEECSSHHHHHHHH
T ss_pred             hHhHHHHhhCCCCcEECCccC---CCEEEEEecCCCCCCCCHHHHHHHHHHHHHHcCCCCCC-ceEEEeccccchhHHHH
Confidence            567889999999999987654   46899999999999999999999999999999988776 67999999999999999


Q ss_pred             HHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHH---HHHhCCCeEEcCCCCCChhHHHHHHhH
Q 028372           87 IAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEE---ILKKTPDGYLLRQFENPANPKIHYETT  163 (210)
Q Consensus        87 ~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~---~~~~~~~~~~~~~~~n~~~~~~g~~t~  163 (210)
                      +|+.+|++|++|+|...++.+++.++.+|++|+.++...  .+....++.   ..++..+.++.++++++.++..|+.|+
T Consensus        79 ~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti  156 (302)
T d1fcja_          79 VAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAK--GMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTT  156 (302)
T ss_dssp             HHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGG--HHHHHHHHHHHHHHTSTTTEEECCTTTCTHHHHHHHHTH
T ss_pred             HHHHhccCCceEEeecCcHHHHHHHHHhccceEEecccc--ccchhhhHHHHHHhhhccceeccccccccchhHHHHhHH
Confidence            999999999999999999999999999999999999753  333333222   233334688899999999888899999


Q ss_pred             HHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          164 GPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       164 ~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +.||++|+++.||+||+|+|+||+++|++.++|...|+++++++.
T Consensus       157 ~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~~~~~v~  201 (302)
T d1fcja_         157 GPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVA  201 (302)
T ss_dssp             HHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTTTCCTTCEEEE
T ss_pred             HHHHHHhcCCCCCEEEEcCCCccccccceeeeeeccccccccccc
Confidence            999999998789999999999999999999999999988776654

>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.4e-46  Score=314.13  Aligned_cols=196  Identities=25%  Similarity=0.300  Sum_probs=176.6

Q ss_pred             CchhhhhHhhhccccCCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchH
Q 028372            2 EDNNAIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTG   81 (210)
Q Consensus         2 ~~~~~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g   81 (210)
                      +++..++++|...+++|||+++++|++.+|.+||+|+|++|||||||||++.+++.++..       ..+|+++|+||||
T Consensus         4 ~~i~~a~~~i~~~ig~TPL~~~~~L~~~~g~~i~~K~E~~nPtGSfKdRgA~~~~~~~~~-------~~~vv~aSsGN~g   76 (310)
T d1ve5a1           4 QDLYAAFRRIAPYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGSFKARGALSKALALEN-------PKGLLAVSSGNHA   76 (310)
T ss_dssp             HHHHHHHHHHGGGSCCCCEEECHHHHHHTTSEEEEEEGGGSGGGBTHHHHHHHHHHHSSS-------CCCEEEECSSHHH
T ss_pred             HHHHHHHHHHhCcCCCCceeEhhhhhHHhCCEEEEEeCCCCCcCCcHHHHHHHHHHHhcc-------cCCccccCchhhH
Confidence            356789999999999999999999998889999999999999999999999887765422       2459999999999


Q ss_pred             HHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHH
Q 028372           82 VGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYE  161 (210)
Q Consensus        82 ~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~  161 (210)
                      .|+|++|+.+|++|++|+|++.++.+++.|+.+|++++.++++  ++++...+++.+++. +++|++||+||.+ ..|+.
T Consensus        77 ~a~A~~aa~~G~~~~i~vp~~~~~~~~~~~~~~Ga~vi~~~~~--~~~~~~~a~~~~~~~-~~~~~~~~~np~~-~~g~~  152 (310)
T d1ve5a1          77 QGVAYAAQVLGVKALVVMPEDASPYKKACARAYGAEVVDRGVT--AKNREEVARALQEET-GYALIHPFDDPLV-IAGQG  152 (310)
T ss_dssp             HHHHHHHHHHTCCEEEECCCC--CCHHHHHHHTTCEEECTTCC--TTTHHHHHHHHHHHH-CCEECCSSSSHHH-HHHHH
T ss_pred             HHHHHHHHHcCCeEEEeecccchHHHHHHHhhhccccceeecc--chhHHHHHHHHHHhc-CCcCCCCCCChhh-Hhhhh
Confidence            9999999999999999999999999999999999999999864  567778888888876 8999999999998 68999


Q ss_pred             hHHHHHHHhhC---CCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          162 TTGPEIWQDSG---GKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       162 t~~~Ei~~q~~---~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +++.||++|++   ..||++++|+|+||+++|++.++++.+|.+++|+|.
T Consensus       153 t~~~Ei~~q~~~~~~~~d~vv~~~g~Gg~~~g~~~~~~~~~~~~~ii~ve  202 (310)
T d1ve5a1         153 TAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVE  202 (310)
T ss_dssp             HHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             hhHHHHHHHHHhcCCceeeeeeccCcchhhhhhhhhhhccCCccceEEEE
Confidence            99999999974   469999999999999999999999999999999985

>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.7e-39  Score=271.61  Aligned_cols=191  Identities=21%  Similarity=0.229  Sum_probs=166.8

Q ss_pred             hHhhhccccCCceeecccc--cCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNV--VDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA   85 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l--~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA   85 (210)
                      .+.|+..+++|||++++++  +...|.+||+|+|++|||||||+|++.+++.++.++|.     ++++++|+||||.++|
T Consensus        19 ~~~i~~~~gnTPLv~l~~~~l~~~~g~~i~~K~E~~nptGSfK~R~a~~~i~~a~~~g~-----~~iv~~SsGN~g~a~a   93 (351)
T d1v7ca_          19 TPVISLLEGSTPLIPLKGPEEARKKGIRLYAKYEGLNPTGSFKDRGMTLAVSKAVEGGA-----QAVACASTGNTAASAA   93 (351)
T ss_dssp             SCCCCSCCCCCCEEECCCCHHHHTTTEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC-----SEEEEECSSHHHHHHH
T ss_pred             CCccccCCCCCCCeECCCcchhhccCCEEEEEEcCCCCccChHHHHHHHHHHHHHhcCC-----CeeeeeccccHHHHHH
Confidence            3447778899999999864  56778999999999999999999999999999998875     6799999999999999


Q ss_pred             HHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372           86 FIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG  164 (210)
Q Consensus        86 ~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  164 (210)
                      ++|+++|++|++++|++. +..+.++|+.+||+|+.++++  ++++.+.+++++++. ++++. ++.|+.+ ..||.|++
T Consensus        94 ~~a~~~g~~~~i~~p~~~~~~~~~~~~~~~Ga~vi~~~~~--~~~~~~~a~~l~~~~-~~~~~-~~~~~~~-~~g~~t~~  168 (351)
T d1v7ca_          94 AYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGN--FDDALRLTQKLTEAF-PVALV-NSVNPHR-LEGQKTLA  168 (351)
T ss_dssp             HHHHHHTCEEEEEEETTCSCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHHS-SCEEC-STTSHHH-HHHHTHHH
T ss_pred             HHHhhhcccceeecCCchHHHHHHHhhhcCCCceEeeccc--cchhhhhHHHHhhhh-ccccc-cccCchh-hhhhhhHH
Confidence            999999999999999876 567888899999999999964  789999999999887 56655 4456665 78999999


Q ss_pred             HHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhc------CCCCEEEEEE
Q 028372          165 PEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKEN------NPDIKVVLRV  208 (210)
Q Consensus       165 ~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~------~~~~~vigv~  208 (210)
                      +||++|++..+|++++++|+||+.+|++.+++..      .+..++++|.
T Consensus       169 ~Ei~eQl~~~~d~~~~~~g~gg~~~g~~~~~~~~~~~~~~~~~~~~~~v~  218 (351)
T d1v7ca_         169 FEVVDELGDAPHYHALPVGNAGNITAHWMGYKAYHALGKAKRLPRMLGFQ  218 (351)
T ss_dssp             HHHHHHHSSCCSEEEEECSSSHHHHHHHHHHHHHHHTTSCSSCCEEEEEE
T ss_pred             HHHHHHHhhhccceeeeecccCCcchhHHHHHHHhhcccccCCcceeeee
Confidence            9999999888999999999999999999988753      4677887775

>d1e5xa_ c.79.1.1 (A:) Threonine synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.7e-38  Score=279.37  Aligned_cols=196  Identities=18%  Similarity=0.114  Sum_probs=169.1

Q ss_pred             hHhhhccccCCceeecccccCC-CC-ceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHH
Q 028372            8 KRDVTELIGNTPMVYLNNVVDG-CV-ARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLA   85 (210)
Q Consensus         8 ~~~i~~~~~~TPl~~~~~l~~~-~~-~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA   85 (210)
                      .+.++.++|+|||+++++|++. .| .+||+|+|++|||||||||++.+++..+.+.+....+..+|+++|+||||.|+|
T Consensus       112 ~~~v~lgeG~TPLv~~~~L~~~~lG~~~ly~K~E~~nPTGSfKDRga~~~i~~a~~~~~~~~~~~~vv~aSsGNtg~AlA  191 (477)
T d1e5xa_         112 DDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALS  191 (477)
T ss_dssp             GGCCCCCCCCCCEEECHHHHHHHHCCSSEEEEETTSSTTSBTTHHHHHHHHHHHHHHHHTTCCCCEEEECCCSHHHHHHH
T ss_pred             CCccccCCCCCceEEchhhhHhhCCCceEEEEECCCCCCcccHHHHHHHHHHHHHHhccccCCcceEEeecCchHHHHHH
Confidence            4457899999999999999865 45 589999999999999999999999999877655444557899999999999999


Q ss_pred             HHHHHcCCcEEEEEcCC-CCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcCCCCCChhHHHHHHhHH
Q 028372           86 FIAAARGYNLIIVMPST-CSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLRQFENPANPKIHYETTG  164 (210)
Q Consensus        86 ~~a~~~g~~~~vvvp~~-~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~n~~~~~~g~~t~~  164 (210)
                      ++|+++|++|+||+|.+ .+..|+.+++.+||+|+.+++  +++++.+.+++++++. + +|..++.|+.+ ..|+.|++
T Consensus       192 a~aa~~Gi~~~I~~P~~~~s~~k~~~~~~~GA~V~~v~g--~~dda~~~~~e~a~~~-~-~~~~~~~N~~~-~~g~~t~~  266 (477)
T d1e5xa_         192 AYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT--DFDGCMKLIREITAEL-P-IYLANSLNSLR-LEGQKTAA  266 (477)
T ss_dssp             HHHHHHTCCEEEEEEGGGCCHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHHS-C-EEEGGGSHHHH-HHHHTHHH
T ss_pred             HHHHhcCCCeEEEeCCCCcCHHHHHHHHhcCcccccccc--CchhhHHHhhhhcccc-c-eeccccccccc-chhhhHHH
Confidence            99999999999999985 688899999999999999986  4899999999998876 4 55677788888 67999999


Q ss_pred             HHHHHhhCC-CCCEEEEccCchhHHHHHHHHHHhcC------CCCEEEEEE
Q 028372          165 PEIWQDSGG-KVDAFISGIGTGGTVTGAGRFLKENN------PDIKVVLRV  208 (210)
Q Consensus       165 ~Ei~~q~~~-~~d~vv~pvG~Gg~~~Gi~~~~k~~~------~~~~vigv~  208 (210)
                      .||++|+++ .||++++|+|+||+++|++.+++++.      ...++++|.
T Consensus       267 ~Ei~~ql~~~~pd~v~vp~G~gg~~~g~~~g~~~l~~~G~~~~~P~~~~v~  317 (477)
T d1e5xa_         267 IEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVDRIPRMVCAQ  317 (477)
T ss_dssp             HHHHHHTTSCCCSEEEEECSSTHHHHHHHHHHHHHHHTTSSSCCCEEEEEE
T ss_pred             HHHHHhhccccceeeeecccCCcchhhHHHHHHHHhhcCccccCceEEEEe
Confidence            999999964 59999999999999999999998641      233566654

>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=6.4e-38  Score=269.02  Aligned_cols=192  Identities=19%  Similarity=0.193  Sum_probs=158.3

Q ss_pred             hcccc-CCceeecccccCCC-CceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372           12 TELIG-NTPMVYLNNVVDGC-VARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA   89 (210)
Q Consensus        12 ~~~~~-~TPl~~~~~l~~~~-~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~   89 (210)
                      ..+++ +|||+++++|++.+ +++||+|+|++|||||||+|++.+++..|.++|.    .+.++++|+||||.++|++|+
T Consensus        44 ~~~~~rpTPLi~~~~Ls~~lgg~~Iy~K~E~lnptGS~KdR~a~~~i~~a~~~G~----~~~v~~~s~Gn~g~a~A~aaa  119 (386)
T d1v8za1          44 KTWAGRPTPLYYAKRLTEKIGGAKIYLKREDLVHGGAHKTNNAIGQALLAKFMGK----TRLIAETGAGQHGVATAMAGA  119 (386)
T ss_dssp             HHTTCCSCCEEECHHHHHHHTSSEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHH
T ss_pred             HhcCCCCCcceEhHhhHHhcCCCeEEEEeccCCCCCCccchHHHHHHHHHhhcCC----ceeEeecccchHHHHHHHHHH
Confidence            44565 69999999999876 4899999999999999999999999999999996    367888999999999999999


Q ss_pred             HcCCcEEEEEcC---CCCHHHHHHHHHcCCEEEEECC-CCCHHHHHHHHHHH-HHhCCCeEE-----cCCCCCChhHHHH
Q 028372           90 ARGYNLIIVMPS---TCSMERRIVLRALGAEIILADS-ALRFEEILEKGEEI-LKKTPDGYL-----LRQFENPANPKIH  159 (210)
Q Consensus        90 ~~g~~~~vvvp~---~~~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a~~~-~~~~~~~~~-----~~~~~n~~~~~~g  159 (210)
                      .+|++|++|||.   .....|+.+++.+||+|+.++. ..++.++...+.+. .......++     ..+++++.++..+
T Consensus       120 ~~G~~~~i~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (386)
T d1v8za1         120 LLGMKVDIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDF  199 (386)
T ss_dssp             HTTCEEEEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHH
T ss_pred             HcCCcccccccchhhhhhHHHHHHHHhcCCeEEEecCCcchHHHHHHHHHHHHHhhhhhhhhccccccCccccchhhhcc
Confidence            999999999985   4456899999999999999975 34567776655443 333322322     3455666667779


Q ss_pred             HHhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          160 YETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       160 ~~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +.+++.||.+|+    +..||+||+|+|+|++++|++.+++ .++++++|+|.
T Consensus       200 ~~~~~~Ei~~q~~~~~g~~pd~vv~~vGgG~~~~g~~~~~~-~~~~v~iigve  251 (386)
T d1v8za1         200 QSVIGREAKAQILEAEGQLPDVIVACVGGGSNAMGIFYPFV-NDKKVKLVGVE  251 (386)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGT-TCTTSEEEEEE
T ss_pred             chhhhhhHHHHHHHhcCCCCCEEEECCCChHHHHHHHHHhh-hccCceEEEEe
Confidence            999999998887    3569999999999999999987764 47899999985

>d1qopb_ c.79.1.1 (B:) Tryptophan synthase, beta-subunit {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Tryptophan synthase, beta-subunit
species: Salmonella typhimurium [TaxId: 90371]

Probab=100.00  E-value=3e-37  Score=264.97  Aligned_cols=193  Identities=17%  Similarity=0.172  Sum_probs=157.5

Q ss_pred             hhccccC-CceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHH
Q 028372           11 VTELIGN-TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAA   89 (210)
Q Consensus        11 i~~~~~~-TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~   89 (210)
                      +.+++++ |||+++++|++.+|++||+|+|++|||||||+|++.+++..|.+.|+    .+.++++|+||||.++|++|+
T Consensus        48 ~~~~~grpTPL~~~~~Ls~~lg~~IylK~E~lnptGS~K~R~a~~~i~~A~~~G~----~~iv~easaGN~g~a~A~aaa  123 (390)
T d1qopb_          48 LKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGK----SEIIAETGAGQHGVASALASA  123 (390)
T ss_dssp             HHHTTCCSCCEEECHHHHTTSSEEEEEEEGGGSTTSBTHHHHHHHHHHHHHHTTC----CEEEEEESSSHHHHHHHHHHH
T ss_pred             HHhcCCCCchhhEhHhhhhhhCCEEEEEEecCCcccccchhHHHHHHHHHhhcCC----ceeeeehhHHHHHHHHHHHHH
Confidence            3556655 99999999999999999999999999999999999999999999996    466788999999999999999


Q ss_pred             HcCCcEEEEEcCCC---CHHHHHHHHHcCCEEEEECC-CCCHHHHHHHH-HHHHHhCCCeEEcCCCCCC-----hhHHHH
Q 028372           90 ARGYNLIIVMPSTC---SMERRIVLRALGAEIILADS-ALRFEEILEKG-EEILKKTPDGYLLRQFENP-----ANPKIH  159 (210)
Q Consensus        90 ~~g~~~~vvvp~~~---~~~~~~~~~~~Ga~v~~v~~-~~~~~~~~~~a-~~~~~~~~~~~~~~~~~n~-----~~~~~g  159 (210)
                      .+|++|+||||...   +..++.+|+.+||+|+.++. ..++.++...+ +......+..+|.....+.     .....+
T Consensus       124 ~~Gl~~~I~mp~~~~~~k~~~v~~m~~~GAeVv~v~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (390)
T d1qopb_         124 LLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREF  203 (390)
T ss_dssp             HHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHT
T ss_pred             hccCceEEeecccccccchHHHHHHHhcCceEEEecCCchhhhHhHHHHHHHHhhhhhhhhhccccccccccccccccch
Confidence            99999999999855   46779999999999999974 34566665554 4444444455555443222     222457


Q ss_pred             HHhHHHHHHHhh----CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          160 YETTGPEIWQDS----GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       160 ~~t~~~Ei~~q~----~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +.+++.|+.+|+    +..||+||+|+|+|++++|++.+|++ .+++++|++.
T Consensus       204 ~~~iG~e~~~q~~~~~g~~pD~vv~~vGgGs~~~G~~~~f~~-~~~~~~ig~e  255 (390)
T d1qopb_         204 QRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFIN-DTSVGLIGVE  255 (390)
T ss_dssp             TTHHHHHHHHHHHHHHSSCCSEEEEECSSSHHHHHHHGGGTT-CTTSEEEEEE
T ss_pred             hhhhcchhHHHHHHHcCCccceEEecccccchhhheeccccc-ccceeEeccc
Confidence            889999998885    35699999999999999999999866 5678888875

>d1j0aa_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=7.4e-35  Score=242.66  Aligned_cols=201  Identities=21%  Similarity=0.209  Sum_probs=157.1

Q ss_pred             hhhHhhhccccCCceeecccccCCCCceEEEEeCCCC--CCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHH
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCVARIAAKLETME--PCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVG   83 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~~~i~~K~E~~~--ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~a   83 (210)
                      ...++++...++|||+++++|++.+|.+||+|+|++|  ||||||+|++.+++.++.++|..   ...++++|+||||.|
T Consensus        10 ~~~p~i~l~~~~TPL~~~~~L~~~~G~~v~iK~Ed~~~~~tgS~K~R~~~~~i~~a~~~g~~---~~~~~~~s~gN~g~a   86 (325)
T d1j0aa_          10 AKFPRVELIPWETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGAD---VVITVGAVHSNHAFV   86 (325)
T ss_dssp             TTCCCCCCCCSCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTCS---EEEEECCTTCHHHHH
T ss_pred             HhCCcccCCCCCCceeEHHHhHHHHCCEEEEEecCCCCCCcchhHHHHHHHHHHHHHHCCCC---eeEEEeeCcchHHHH
Confidence            3457789999999999999999888999999999877  99999999999999999988851   134556788999999


Q ss_pred             HHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcC-CEEEEECC--CCCHHHH-HHHHHHHHHhCCCeEEcCCCCCChhHHHH
Q 028372           84 LAFIAAARGYNLIIVMPSTCSMERRIVLRALG-AEIILADS--ALRFEEI-LEKGEEILKKTPDGYLLRQFENPANPKIH  159 (210)
Q Consensus        84 lA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~G-a~v~~v~~--~~~~~~~-~~~a~~~~~~~~~~~~~~~~~n~~~~~~g  159 (210)
                      +|++|+.+|++|++|+|...+..+...+..++ ..+..++.  ....... ...++....+....+++.+..+......+
T Consensus        87 ~A~~a~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (325)
T d1j0aa_          87 TGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGASPIGTLG  166 (325)
T ss_dssp             HHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGCSHHHHTH
T ss_pred             HHHHHhhhcCceEEEeecccccchhhhhccccceeEEeccCcccccchHHHHHHHHHHHhhccCceeeecCCCccccccc
Confidence            99999999999999999988766655554443 33334443  2211222 22333333334455555554444444678


Q ss_pred             HHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          160 YETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       160 ~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +.+++.|+.+|.+..+|+||+|+|+|++++|+..+++...|++++++|.+
T Consensus       167 ~~~~~~e~~~~~~~~~d~vv~~~G~G~~~~gi~~~~~~~~~~~~v~~v~~  216 (325)
T d1j0aa_         167 YVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAV  216 (325)
T ss_dssp             HHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred             cchhhcccccccccccceeecccccchhhhhHHHHHHhhCcccccccccc
Confidence            89999999999988899999999999999999999999999999999875

>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Pseudomonas sp., strain ACP [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Pseudomonas sp., strain ACP [TaxId: 306]

Probab=100.00  E-value=1.7e-32  Score=227.15  Aligned_cols=200  Identities=18%  Similarity=0.075  Sum_probs=151.5

Q ss_pred             hhhHhhhccccCCceeecccccCCCC--ceEEEEeCCCCCCCch---hhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCch
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSV---KDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNT   80 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~ptGS~---K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~   80 (210)
                      .-++|++..+++|||+++++|++.+|  .+||+|+|++||||||   |+|++.+++.+++++|.   ....++++|+|||
T Consensus         4 ~~~~r~~l~~g~TPL~~~~~L~~~lg~~~~i~~K~E~~~ptgS~~gnK~R~~~~~i~~a~~~g~---~~v~~~~~s~gN~   80 (338)
T d1tyza_           4 QRFPRYPLTFGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGC---DTLVSIGGIQSNQ   80 (338)
T ss_dssp             GGSCCCCCSSSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHHHHHHHHHTTC---CEEEEEEETTCHH
T ss_pred             ccCCccccCCCCCceeEhHHHHHHHCCCCEEEEEECCCCCCcccccCHHHHHHHHHHHHHHCCC---CeEEEEccCCchH
Confidence            45677899999999999999998776  5899999999999999   99999999999999885   1133456799999


Q ss_pred             HHHHHHHHHHcCCcEEEEEcCCCCH--------HHHHHHHHcCCEEEEECCCCCH--H-HHHHHHHHHHHhCCCeEEcCC
Q 028372           81 GVGLAFIAAARGYNLIIVMPSTCSM--------ERRIVLRALGAEIILADSALRF--E-EILEKGEEILKKTPDGYLLRQ  149 (210)
Q Consensus        81 g~alA~~a~~~g~~~~vvvp~~~~~--------~~~~~~~~~Ga~v~~v~~~~~~--~-~~~~~a~~~~~~~~~~~~~~~  149 (210)
                      |.|+|++|+.+|++|++|+|...+.        .+.+.++.+|+.++.++...+.  . ...+.+........+.++..+
T Consensus        81 g~A~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1tyza_          81 TRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFDIGFRRSWEDALESVRAAGGKPYAIPA  160 (338)
T ss_dssp             HHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEECCCC-------CHHHHHHHHHHHTTCCEEEECG
T ss_pred             HHHHHHHHhhccCcEEEEECCCcchhhhhhhhccccceeeeeccccccccCCcchhHHHHHHHHHhhhhhcccceeeecc
Confidence            9999999999999999999986543        4556788999999998864221  1 222233334444445666655


Q ss_pred             CCCChhHHHHHHhHHHHHH-----HhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          150 FENPANPKIHYETTGPEIW-----QDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       150 ~~n~~~~~~g~~t~~~Ei~-----~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      +.++.. ..+..+.+.|..     ++.+..||+||+|+|+|++++|++.+++...+..+++++.+
T Consensus       161 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~iv~~~G~G~~~~G~~~~~~~~~~~~~~~~~~~  224 (338)
T d1tyza_         161 GCSDHP-LGGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGVDA  224 (338)
T ss_dssp             GGTSST-TTTTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGGGEEEEEC
T ss_pred             cCccCc-cccccccchHHHHHHHHHhcCCCccEEEEeecChhHHHHHHHHHHHHhhhhcccceee
Confidence            444332 333344444433     33456799999999999999999999999999998888754

>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase {Yeast (Hansenula saturnus) [TaxId: 4906]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: 1-aminocyclopropane-1-carboxylate deaminase
species: Yeast (Hansenula saturnus) [TaxId: 4906]

Probab=99.97  E-value=2e-31  Score=221.39  Aligned_cols=200  Identities=16%  Similarity=0.133  Sum_probs=155.9

Q ss_pred             hhhHhhhccccCCceeecccccCCCC--ceEEEEeCCCCCCCch---hhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCch
Q 028372            6 AIKRDVTELIGNTPMVYLNNVVDGCV--ARIAAKLETMEPCSSV---KDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNT   80 (210)
Q Consensus         6 ~~~~~i~~~~~~TPl~~~~~l~~~~~--~~i~~K~E~~~ptGS~---K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~   80 (210)
                      ..++++....++|||+++++|++.+|  .+||+|+|++||+|||   |+|++.+++.++.++|.-   ...++++|+|||
T Consensus         4 ~~~~~~~l~~~~TPl~~~~~L~~~lg~~~~i~~K~E~~~p~GSf~gnK~R~~~~~i~~a~~~g~~---~i~~~~as~gN~   80 (341)
T d1f2da_           4 AKFAKYPLTFGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYT---HLVSIGGRQSNQ   80 (341)
T ss_dssp             TSSCCCCCSSSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCCS---EEEEEEETTCHH
T ss_pred             ccccCccCCCCCCceeEHHHHHHHHCCCCEEEEEECCCCCCCccccChHHHHHHHHHHHHHCCCC---EEEEEccCcchH
Confidence            34567888999999999999998887  4899999999999999   999999999999998851   133467899999


Q ss_pred             HHHHHHHHHHcCCcEEEEEcCCCCHH-----------HHHHHHHcCCEEEEECCCCCH---HHHHHHHHHHHHhCCCeEE
Q 028372           81 GVGLAFIAAARGYNLIIVMPSTCSME-----------RRIVLRALGAEIILADSALRF---EEILEKGEEILKKTPDGYL  146 (210)
Q Consensus        81 g~alA~~a~~~g~~~~vvvp~~~~~~-----------~~~~~~~~Ga~v~~v~~~~~~---~~~~~~a~~~~~~~~~~~~  146 (210)
                      |.|+|++|+.+|++|++|+|.+.+..           +...++.+|+++..++...+.   .................++
T Consensus        81 g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (341)
T d1f2da_          81 TRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFDIGMRKSFANALQELEDAGHKPYP  160 (341)
T ss_dssp             HHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCCSSCCHHHHHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHHHHhcCceEEEccCCCCHHHHHHHHHhhccceechhhccccccccCCchhhHHHHHHHHHHHHHHhhccCccc
Confidence            99999999999999999999887654           456678899999999864221   2233333444444444554


Q ss_pred             cCCC--CCChhHHHHHHhHHHHHHHhh---CCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEEe
Q 028372          147 LRQF--ENPANPKIHYETTGPEIWQDS---GGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRVL  209 (210)
Q Consensus       147 ~~~~--~n~~~~~~g~~t~~~Ei~~q~---~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~~  209 (210)
                      ...+  .++.. ..++.+.+.++.+|.   ...||++|+|+|+|++++|++.+++...+..+++++..
T Consensus       161 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~G~~~~g~~~~~~~~~~~~~~~~~~~  227 (341)
T d1f2da_         161 IPAGCSEHKYG-GLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDA  227 (341)
T ss_dssp             ECGGGTTSTTT-TTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEEC
T ss_pred             cCCcccccccc-hhhehhhhHHHHHHHhhccCCceEEEEecccccchhhHHHHHHHhccccccccccc
Confidence            4433  23443 456667777776664   46799999999999999999999999999988888753

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=2.3e-19  Score=153.90  Aligned_cols=182  Identities=14%  Similarity=0.045  Sum_probs=139.2

Q ss_pred             CCceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHc-CCcE
Q 028372           17 NTPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAAR-GYNL   95 (210)
Q Consensus        17 ~TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~-g~~~   95 (210)
                      +.|+.++.       .++|+....+.||+|||||++..+...+...+.  .+..+|+++||||+|.|.+.+.+.. ++++
T Consensus        83 ~~p~~~~~-------~~~~~lELfhGPT~aFKD~a~~~~~~~~~~~~~--~~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~  153 (428)
T d1vb3a1          83 PAPVANVE-------SDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAG--DKPVTILTATSGDTGAAVAHAFYGLPNVKV  153 (428)
T ss_dssp             CCCEEEEE-------TTEEEEECCCSTTSBTHHHHHHHHHHHHHHHTT--TCCEEEEEECSSSHHHHHHHHTTTCTTEEE
T ss_pred             Cccceecc-------CCceeeeeccCCCcccccchhhHHHHHHhhhcc--cccceeeecCCCCcchhHHHHHhCccccce
Confidence            46666554       269999999999999999998876554443322  1246799999999999998886665 6899


Q ss_pred             EEEEcC-CCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCC----CeEEcCCCCCChhHHHHHHhHHHHHHHh
Q 028372           96 IIVMPS-TCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTP----DGYLLRQFENPANPKIHYETTGPEIWQD  170 (210)
Q Consensus        96 ~vvvp~-~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~n~~~~~~g~~t~~~Ei~~q  170 (210)
                      +++.|. .++..++++|..+|++|+.+.-++++|+|++.++++..+.+    .....-..-|+.. +.++.+...|++.|
T Consensus       154 ~vl~P~g~vS~~Q~~Qmtt~g~nv~vi~V~G~fDDcq~lvk~~f~d~~~~~~~~l~s~NSIN~~R-l~~Q~vyyf~a~~q  232 (428)
T d1vb3a1         154 VILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR-LLAQICYYFEAVAQ  232 (428)
T ss_dssp             EEEEETTCSCHHHHHHHHSCCTTEEEEEEESCHHHHHHHHHHGGGCHHHHHHHTEECCSTTSHHH-HHHTTHHHHHHHTT
T ss_pred             EEEecCCCCcHHHHHHHhhccCCceEEecCCChhHHHHHHHHHhhhhhhhhcCCeeeecccChhH-HhhhHHHHHHHHHH
Confidence            999997 57999999999999988776655679999999988875431    0112111224443 55899999999999


Q ss_pred             hCC---CCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          171 SGG---KVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       171 ~~~---~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      +..   .++.+++|+|++|.+.+.+.+.+...|--++|..+
T Consensus       233 l~~~~~~~~~~~VPtGNfGni~Ag~~Ak~mGLPi~~~i~At  273 (428)
T d1vb3a1         233 LPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAAT  273 (428)
T ss_dssp             SCTTTTTSEEEEEECSSCHHHHHHHHHHHTTCCCSEEEEEE
T ss_pred             hccccCCceEEeccHHHHHHHHHHHHhhhcCCceeeeeccc
Confidence            852   47899999999999999999988888877777543

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=1.4e-10  Score=100.46  Aligned_cols=188  Identities=15%  Similarity=0.065  Sum_probs=130.7

Q ss_pred             CceeecccccCCCCceEEEEeCCCCCCCchhhHHHHHHHHH---HHHc-C-CC---CCCCeEEEeeCCCchHHHHHHHHH
Q 028372           18 TPMVYLNNVVDGCVARIAAKLETMEPCSSVKDRIAYSMIKD---AEDK-G-LI---TPGKTTLIEVTSGNTGVGLAFIAA   89 (210)
Q Consensus        18 TPl~~~~~l~~~~~~~i~~K~E~~~ptGS~K~R~a~~~~~~---a~~~-g-~~---~~~~~~vv~~ssGN~g~alA~~a~   89 (210)
                      +||.++.   .....++|+---.+.||.+|||.++..+..-   ..++ + .+   +...-.|+++|||.+|.|.+.+.+
T Consensus        96 ~pl~~~~---~~~~~~~~vlELfhGPT~aFKD~a~~~l~~~~~~~l~~~~~~~~~~~~~~~~il~aTSGDTG~Aa~~af~  172 (511)
T d1kl7a_          96 TPLVQNV---TGDKENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVGATSGDTGSAAIYGLR  172 (511)
T ss_dssp             SCEECCT---TCSSSCEEEEECCCSTTSBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCCEEEEEECSSSHHHHHHHHHT
T ss_pred             Ccccccc---cCCCCceEEEeeccCCcccccCcchhhHHHHHHHHHHhcccccccccCceEEEEEecCCCccHHHHHHhc
Confidence            6776652   1223479999999999999999998766532   2211 1 10   112467999999999999988876


Q ss_pred             -HcCCcEEEEEcCC-CCHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHHHHHhCC-CeEEcCCCCCChhHHH------H
Q 028372           90 -ARGYNLIIVMPST-CSMERRIVLRALGA-EIILADSALRFEEILEKGEEILKKTP-DGYLLRQFENPANPKI------H  159 (210)
Q Consensus        90 -~~g~~~~vvvp~~-~~~~~~~~~~~~Ga-~v~~v~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~n~~~~~~------g  159 (210)
                       .-+++++++.|.+ +++..+++|...++ +|+.+.-++++|+|+...+++-.+.+ ..-+--...|..||..      +
T Consensus       173 ~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~G~fDDcq~~vk~~f~d~~~~~~~~l~s~NSiNw~Rll~Qivy  252 (511)
T d1kl7a_         173 GKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTGTFDNCQDIVKAIFGDKEFNSKHNVGAVNSINWARILAQMTY  252 (511)
T ss_dssp             TCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEESSCHHHHHHHHHHHHHCSSCC--CCBCCCCSCCHHHHHHHHHH
T ss_pred             CCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEeccChHHHHHHHHHHHhhhhhhcccccccccceeehhhhhhHHH
Confidence             5699999999984 89999999988754 88877766789999999999887653 1112222357767533      2


Q ss_pred             HHhHHHHHHHhhCCCCCEEEEccCchhHHHHHHHHHHhcCCCCEEEEEE
Q 028372          160 YETTGPEIWQDSGGKVDAFISGIGTGGTVTGAGRFLKENNPDIKVVLRV  208 (210)
Q Consensus       160 ~~t~~~Ei~~q~~~~~d~vv~pvG~Gg~~~Gi~~~~k~~~~~~~vigv~  208 (210)
                      |-+....+.....+++=.++||.|+-|.+.+.+.+-+...|--++|..+
T Consensus       253 Yf~ay~q~~~~~~~~~v~f~VPTGNfGni~Ag~~Ak~MGLPI~klivAt  301 (511)
T d1kl7a_         253 YFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIAT  301 (511)
T ss_dssp             HHHHHHHHHSSSSCCCEEEEEECSSSHHHHHHHHHHHHTCCCCCEEEEE
T ss_pred             HHHHHHHHhhhccCCeeEEEeccCcHHHHHHHHHHHhcCCChheEEEec
Confidence            2222233332222345679999999999988888887777776777653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.028  Score=40.15  Aligned_cols=70  Identities=26%  Similarity=0.330  Sum_probs=51.3

Q ss_pred             HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHH
Q 028372           58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEI  130 (210)
Q Consensus        58 ~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~  130 (210)
                      .+.++..+++|.. |+....|..|...+..++.+|.+-++++.  ..+.|++..+.+||+.+....+.+..+.
T Consensus        17 ~a~~~~~~~~gd~-VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d--~~~~rl~~a~~~Ga~~~~~~~~~~~~~~   86 (171)
T d1pl8a2          17 HACRRGGVTLGHK-VLVCGAGPIGMVTLLVAKAMGAAQVVVTD--LSATRLSKAKEIGADLVLQISKESPQEI   86 (171)
T ss_dssp             HHHHHHTCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEE--SCHHHHHHHHHTTCSEEEECSSCCHHHH
T ss_pred             HHHHHhCCCCCCE-EEEECCCccHHHHHHHHHHcCCceEEecc--CCHHHHHHHHHhCCcccccccccccccc
Confidence            3445556778855 55557799999999999999997666654  3478888999999988777655444443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.87  E-value=0.026  Score=40.10  Aligned_cols=59  Identities=24%  Similarity=0.275  Sum_probs=44.5

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .++..+++|.+.+| ..+|.-|...+..++.+|.+++++-   ..+.|++.++.+|++...+.
T Consensus        19 ~~~~~~~~g~~vlV-~G~G~vG~~~~~~ak~~Ga~vi~v~---~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2          19 CRRAGVQLGTTVLV-IGAGPIGLVSVLAAKAYGAFVVCTA---RSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             HHHHTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEEEC
T ss_pred             HHHhCCCCCCEEEE-EcccccchhhHhhHhhhcccccccc---hHHHHHHHHHHcCCcEEEec
Confidence            34445778866555 4689999999999999998866653   36788999999999766554

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.55  E-value=0.0052  Score=38.71  Aligned_cols=62  Identities=23%  Similarity=0.309  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCC
Q 028372           52 AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGA  116 (210)
Q Consensus        52 a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga  116 (210)
                      ++..+....+.+...++.+.+|...+|.-|....-.++.+|.+++.+..   +++|.+.++.+||
T Consensus        16 A~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~---s~~k~~~~~~lGA   77 (77)
T d1o8ca2          16 AMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG---RESTHEYLKSLGA   77 (77)
T ss_dssp             HHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEES---CGGGHHHHHHHTE
T ss_pred             HHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEEC---CHHHHHHHHHCCC
Confidence            3333444556666677778888888899999988899999999888776   5577888888886

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.51  E-value=0.011  Score=42.53  Aligned_cols=65  Identities=18%  Similarity=0.144  Sum_probs=50.7

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHH
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE  128 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~  128 (210)
                      +.+.++||++.+|.+.+|.-|.++...|+..|.++++...   ++.|++.++.+||+-+.-..+.++.
T Consensus        22 ~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~---s~~k~~~~~~lGa~~vi~~~~~d~~   86 (179)
T d1qora2          22 KTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG---TAQKAQSALKAGAWQVINYREEDLV   86 (179)
T ss_dssp             TTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHHHTCSEEEETTTSCHH
T ss_pred             HHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeeccc---chHHHHHHHhcCCeEEEECCCCCHH
Confidence            4567888877778888899999999999999998777665   5778888999999866554443343

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.49  E-value=0.012  Score=42.66  Aligned_cols=64  Identities=19%  Similarity=0.269  Sum_probs=52.5

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCH
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF  127 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~  127 (210)
                      +.+.+++|+..+|.+.+|.-|.++...|+..|.+++.++.   ++.+.+.++.+|++.+....+.++
T Consensus        23 ~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~---~~~~~~~~~~~Ga~~vi~~~~~~~   86 (182)
T d1v3va2          23 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG---SDEKIAYLKQIGFDAAFNYKTVNS   86 (182)
T ss_dssp             TTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETTSCSC
T ss_pred             HHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCC---CHHHHHHHHhhhhhhhcccccccH
Confidence            4566788888888899999999999999999999888875   467899999999987766554333

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.058  Score=38.47  Aligned_cols=62  Identities=19%  Similarity=0.295  Sum_probs=48.1

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      .+.+.+++|++.+|...+|.-|.+....|+.+|.++++.+.   ++.+++.++.+|++-+....+
T Consensus        21 ~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~---~~~~~~~~~~~Ga~~vi~~~~   82 (174)
T d1yb5a2          21 IHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG---TEEGQKIVLQNGAHEVFNHRE   82 (174)
T ss_dssp             HTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHTTCSEEEETTS
T ss_pred             HHHhCCCCCCEEEEEeccccccccccccccccCcccccccc---cccccccccccCccccccccc
Confidence            35567888877677666799999988999999999877775   467888999999976554443

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.00  E-value=0.035  Score=39.28  Aligned_cols=61  Identities=20%  Similarity=0.153  Sum_probs=45.4

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCH
Q 028372           63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF  127 (210)
Q Consensus        63 g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~  127 (210)
                      ..+++|++.+| ...|.-|...+..++.+|.+++++.   ..+.|++..+.+|++......+.+.
T Consensus        23 ~~~~~g~~VlV-~GaG~vG~~~~~~ak~~G~~Vi~~~---~~~~~~~~a~~~Ga~~~i~~~~~~~   83 (166)
T d1llua2          23 TNARPGQWVAI-SGIGGLGHVAVQYARAMGLHVAAID---IDDAKLELARKLGASLTVNARQEDP   83 (166)
T ss_dssp             HTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCEEEEEE---SCHHHHHHHHHTTCSEEEETTTSCH
T ss_pred             hCCCCCCEEEE-eeccccHHHHHHHHHHcCCccceec---chhhHHHhhhccCccccccccchhH
Confidence            34677766555 6679999999999999998766653   3688889999999977665544333

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.63  E-value=0.011  Score=43.19  Aligned_cols=62  Identities=24%  Similarity=0.251  Sum_probs=49.1

Q ss_pred             HcCCCCCCCeEEE-eeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEEC
Q 028372           61 DKGLITPGKTTLI-EVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILAD  122 (210)
Q Consensus        61 ~~g~~~~~~~~vv-~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +.+.++||++.++ .+.+|.-|.+....|+.+|.++++++.... .+.+.+.++.+||+.+...
T Consensus        22 ~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~   85 (189)
T d1gu7a2          22 HYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE   85 (189)
T ss_dssp             SSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH
T ss_pred             HHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEec
Confidence            4567888876666 467788899999999999999999987654 4677888899999877654

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.60  E-value=0.14  Score=36.57  Aligned_cols=75  Identities=25%  Similarity=0.283  Sum_probs=50.9

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHH
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEI  137 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~  137 (210)
                      .+.+.+++|.+.+|. .+|..|......++.+|.+-++++..  .+.+++.++.+||+.+....+.+..+..+...++
T Consensus        21 ~~~~~~~~G~~VlV~-GaG~iG~~~~~~ak~~Ga~~Vi~~~~--~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~   95 (182)
T d1vj0a2          21 DEYPESFAGKTVVIQ-GAGPLGLFGVVIARSLGAENVIVIAG--SPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI   95 (182)
T ss_dssp             HTCSSCCBTCEEEEE-CCSHHHHHHHHHHHHTTBSEEEEEES--CHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHH
T ss_pred             HHHhCCCCCCEEEEE-CCCccchhheeccccccccccccccc--ccccccccccccceEEEeccccchHHHHHHHHHh
Confidence            355677888665554 56899999999999999854443332  6778889999999776655544454444444443

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.53  E-value=0.081  Score=37.76  Aligned_cols=61  Identities=26%  Similarity=0.412  Sum_probs=48.2

Q ss_pred             HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           61 DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        61 ~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      +.+.+++|.+.+|.+.+|..|..+.-.|+.+|.++++.+.   ++.+.+.++.+|++-+....+
T Consensus        19 ~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~---~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_          19 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG---SDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES---SHHHHHHHHTTCCSEEEETTC
T ss_pred             HHhCCCCCCEEEEECCCCCcccccchhhccccccceeeec---ccccccccccccccccccCCc
Confidence            4566788877677677799999999999999999988875   457788999999986655443

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.49  E-value=0.11  Score=37.88  Aligned_cols=66  Identities=23%  Similarity=0.186  Sum_probs=49.4

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCH
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRF  127 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~  127 (210)
                      +.+...+++|.+ |+....|.-|...+..++.+|-..++++..  .+.|++..+.+|++.+....+.++
T Consensus        17 a~~~a~v~~G~t-VlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~--~~~rl~~a~~~Ga~~~~~~~~~~~   82 (195)
T d1kola2          17 GAVTAGVGPGST-VYVAGAGPVGLAAAASARLLGAAVVIVGDL--NPARLAHAKAQGFEIADLSLDTPL   82 (195)
T ss_dssp             HHHHTTCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHTTCEEEETTSSSCH
T ss_pred             HHHHhCCCCCCE-EEEECcCHHHHHHHHHHHhhcccceeeecc--cchhhHhhhhccccEEEeCCCcCH
Confidence            344556788865 545677999999899999999977777654  578999999999998776554434

>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: Pyruvate kinase C-terminal domain-like
superfamily: PK C-terminal domain-like
family: MTH1675-like
domain: Hypothetical protein AF0103
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.44  E-value=0.07  Score=38.65  Aligned_cols=75  Identities=21%  Similarity=0.301  Sum_probs=58.1

Q ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC---------CCCHHHHHHHHH
Q 028372           43 PCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS---------TCSMERRIVLRA  113 (210)
Q Consensus        43 ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~---------~~~~~~~~~~~~  113 (210)
                      |.-.+=...+...+.+|.|.|.    +..|+.+++|.++..++-+.  .|+++++|.-.         ..++..++.++.
T Consensus        12 ~G~~NT~~~l~~a~~rA~Elgi----~~iVvAStsG~TA~~~~e~~--~g~~lvvVth~~GF~~pg~~e~~~e~~~~L~~   85 (190)
T d1vp8a_          12 PGRENTEETLRLAVERAKELGI----KHLVVASSYGDTAMKALEMA--EGLEVVVVTYHTGFVREGENTMPPEVEEELRK   85 (190)
T ss_dssp             CSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHHHC--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHcCC----CeEEEEeCCcHHHHHHHHHh--cCCeEEEEecccCCCCCCcccCCHHHHHHHHH
Confidence            4446777888888999999885    36667777799988777665  38898887642         357899999999


Q ss_pred             cCCEEEEECC
Q 028372          114 LGAEIILADS  123 (210)
Q Consensus       114 ~Ga~v~~v~~  123 (210)
                      .|.+|..-..
T Consensus        86 ~G~~V~t~tH   95 (190)
T d1vp8a_          86 RGAKIVRQSH   95 (190)
T ss_dssp             TTCEEEECCC
T ss_pred             cCCEEEEecc
Confidence            9999987654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.43  E-value=0.11  Score=36.72  Aligned_cols=63  Identities=25%  Similarity=0.217  Sum_probs=46.8

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      .++..++++.+.+|.+.+|..|..++..++..|...++++..+  +.+++.++.+|++......+
T Consensus        20 l~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~--~~~~~~~~~~Ga~~~i~~~~   82 (170)
T d1jvba2          20 VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR--EEAVEAAKRAGADYVINASM   82 (170)
T ss_dssp             HHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS--HHHHHHHHHHTCSEEEETTT
T ss_pred             HHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccc--hhhHHHHHHcCCceeeccCC
Confidence            3445677886766666679999999999999998666665543  67888999999976555443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.42  E-value=0.085  Score=37.04  Aligned_cols=61  Identities=23%  Similarity=0.244  Sum_probs=46.5

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHH
Q 028372           64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE  128 (210)
Q Consensus        64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~  128 (210)
                      .++||.+.+| ..+|.-|...+..++..|.+++++   ..++.|++.++.+|++.+....+.++.
T Consensus        24 ~~~~g~~vlv-~G~G~iG~~a~~~a~~~g~~v~~~---~~~~~r~~~~k~~Ga~~~~~~~~~~~~   84 (168)
T d1rjwa2          24 GAKPGEWVAI-YGIGGLGHVAVQYAKAMGLNVVAV---DIGDEKLELAKELGADLVVNPLKEDAA   84 (168)
T ss_dssp             TCCTTCEEEE-ECCSTTHHHHHHHHHHTTCEEEEE---CSCHHHHHHHHHTTCSEEECTTTSCHH
T ss_pred             CCCCCCEEEE-eecccchhhhhHHHhcCCCeEecc---CCCHHHhhhhhhcCcceecccccchhh
Confidence            4677766555 567999999999999999986554   346788999999999988777654443

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.42  E-value=0.03  Score=40.10  Aligned_cols=59  Identities=25%  Similarity=0.361  Sum_probs=45.9

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +.+++.++||++.+|.+.+|.-|.+....|+.+|.++++++.   ++.+++.++.+|++.+.
T Consensus        19 al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~---~~~~~~~~~~lGa~~~i   77 (171)
T d1iz0a2          19 ALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS---RPEKLALPLALGAEEAA   77 (171)
T ss_dssp             HHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES---SGGGSHHHHHTTCSEEE
T ss_pred             HHHHhCCCCCCEEEEEeccccchhhhhhhhcccccccccccc---cccccccccccccceee
Confidence            334566888877677677799999999999999998777664   35677888899997654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=95.22  E-value=0.028  Score=40.39  Aligned_cols=67  Identities=22%  Similarity=0.315  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           52 AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        52 a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      |+..+....+.|...+++..+|.+.+|.-|.+..-.|+.+|.+++..+..   +.|.+.++.+|++.+..
T Consensus         8 A~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s---~~k~~~~~~lGad~vi~   74 (167)
T d1tt7a2           8 AALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGN---REAADYLKQLGASEVIS   74 (167)
T ss_dssp             HHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESS---SSTHHHHHHHTCSEEEE
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecC---HHHHHHHHhhcccceEe
Confidence            44444556677776666677888888999999999999999999888774   45677788899987653

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.20  E-value=0.04  Score=39.91  Aligned_cols=68  Identities=22%  Similarity=0.305  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           52 AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        52 a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      |+..+....+.|....+...+|.+.+|.-|.+..-.|+.+|.+++.++.   ++.|.+.++.+||+.+...
T Consensus        16 A~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~---~~~k~~~~~~lGad~vi~~   83 (177)
T d1o89a2          16 AMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG---RESTHEYLKSLGASRVLPR   83 (177)
T ss_dssp             HHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEES---CGGGHHHHHHHTEEEEEEG
T ss_pred             HHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEec---chhHHHHHHhhcccccccc
Confidence            4444444556665444446788888899999988899999999998776   5667788889999877654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.00  E-value=0.04  Score=39.94  Aligned_cols=68  Identities=28%  Similarity=0.332  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           52 AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        52 a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      |+..+....+.|..++|++.+|.+.+|.-|.+.--.|+.+|.+++.....   +.|.+.++.+|++.+.-.
T Consensus        16 A~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s---~~k~~~~~~lGa~~vi~~   83 (176)
T d1xa0a2          16 AALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGK---AAEHDYLRVLGAKEVLAR   83 (176)
T ss_dssp             HHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESC---TTCHHHHHHTTCSEEEEC
T ss_pred             HHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCc---hHHHHHHHhcccceeeec
Confidence            44445556677888878788998889999998888899999999987764   456777888999876643

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.78  E-value=0.16  Score=36.09  Aligned_cols=60  Identities=20%  Similarity=0.281  Sum_probs=45.9

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .+.+.++||...+| ...|--|...+..++.+|.+.++++..  .+.|++..+.+|+.-+...
T Consensus        21 ~~~~~~~~g~~VlI-~G~G~iG~~~~~~ak~~g~~~v~~~~~--~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2          21 INALKVTPASSFVT-WGAGAVGLSALLAAKVCGASIIIAVDI--VESRLELAKQLGATHVINS   80 (174)
T ss_dssp             HTTTCCCTTCEEEE-ESCSHHHHHHHHHHHHHTCSEEEEEES--CHHHHHHHHHHTCSEEEET
T ss_pred             HHhhCCCCCCEEEE-eCCCHHHhhhhhcccccccceeeeecc--HHHHHHHHHHcCCeEEEeC
Confidence            45567888866544 567999999999999999998777653  5688889999998554433

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=94.69  E-value=0.11  Score=37.26  Aligned_cols=61  Identities=23%  Similarity=0.132  Sum_probs=45.7

Q ss_pred             HHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           59 AEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        59 a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      +.+...+++|.+.+| ...|--|...+..|+.+|.+-+++++.  .+.|++..+.+||+-....
T Consensus        19 a~~~a~~~~g~~VlI-~GaG~vGl~~~q~ak~~Ga~~Vi~~d~--~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2          19 GAELADIEMGSSVVV-IGIGAVGLMGIAGAKLRGAGRIIGVGS--RPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             HHHHTTCCTTCCEEE-ECCSHHHHHHHHHHHTTTCSCEEEECC--CHHHHHHHHHHTCSEEECG
T ss_pred             HHHHhCCCCCCEEEE-EcCCcchhhhhhhhhcccccccccccc--hhhhHHHHHhhCccccccc
Confidence            445667888866555 567999999999999999865555543  5788899999999665444

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=94.20  E-value=0.17  Score=35.58  Aligned_cols=62  Identities=24%  Similarity=0.254  Sum_probs=46.1

Q ss_pred             HHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           58 DAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        58 ~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      .+.++..++||.+.+| ...|.-|...+..++.+|.+.+++.+   .+.+++..+.+|++.+....
T Consensus        21 ~al~~~~~~~G~~VlI-~GaG~vG~~a~qlak~~Ga~~i~~~~---~~~~~~~a~~lGad~~i~~~   82 (168)
T d1uufa2          21 SPLRHWQAGPGKKVGV-VGIGGLGHMGIKLAHAMGAHVVAFTT---SEAKREAAKALGADEVVNSR   82 (168)
T ss_dssp             HHHHHTTCCTTCEEEE-ECCSHHHHHHHHHHHHTTCEEEEEES---SGGGHHHHHHHTCSEEEETT
T ss_pred             HHHHHhCCCCCCEEEE-eccchHHHHHHHHhhcccccchhhcc---chhHHHHHhccCCcEEEECc
Confidence            3445567888866555 55788999999999999999876544   34567888999998766543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.19  E-value=0.23  Score=32.88  Aligned_cols=40  Identities=23%  Similarity=0.248  Sum_probs=33.2

Q ss_pred             CCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCH
Q 028372           66 TPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM  105 (210)
Q Consensus        66 ~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~  105 (210)
                      .|+..+|-.-.+|..|+-+|.+|+++|++++++-|....+
T Consensus         8 ~~~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~P   47 (111)
T d1kjqa2           8 RPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAP   47 (111)
T ss_dssp             STTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCG
T ss_pred             CCCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCc
Confidence            4555668888999999999999999999999998764433

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.14  E-value=0.3  Score=36.82  Aligned_cols=33  Identities=24%  Similarity=0.381  Sum_probs=26.3

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      |+..+||.+++.-|.++|......|.++++.-.
T Consensus         5 gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r   37 (251)
T d1vl8a_           5 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR   37 (251)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            457889999999999999988888887666543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.70  E-value=0.55  Score=35.48  Aligned_cols=32  Identities=19%  Similarity=0.099  Sum_probs=24.6

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      |+..+||.+++.-|.++|..-...|.++++.-
T Consensus         8 gK~alVTGas~GIG~aiA~~la~~Ga~V~~~~   39 (259)
T d1xq1a_           8 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCA   39 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            45788888888889998888777777665543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.67  E-value=0.13  Score=36.28  Aligned_cols=58  Identities=26%  Similarity=0.254  Sum_probs=42.6

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      .++..++||.+.+| ...|..|...+..++.+|.+++++..   ++.|++..+.+||+-...
T Consensus        20 l~~~~~~~g~~vlI-~GaG~vG~~a~q~ak~~G~~vi~~~~---~~~k~~~a~~lGa~~~i~   77 (168)
T d1piwa2          20 LVRNGCGPGKKVGI-VGLGGIGSMGTLISKAMGAETYVISR---SSRKREDAMKMGADHYIA   77 (168)
T ss_dssp             HHHTTCSTTCEEEE-ECCSHHHHHHHHHHHHHTCEEEEEES---SSTTHHHHHHHTCSEEEE
T ss_pred             HHHhCcCCCCEEEE-ECCCCcchhHHHHhhhcccccccccc---chhHHHHhhccCCcEEee
Confidence            33445778866555 56799999999999999998776543   345778889999965443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.47  Score=35.80  Aligned_cols=31  Identities=19%  Similarity=0.320  Sum_probs=24.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      +..+|+..++--|.++|....+.|.++++.-
T Consensus        11 Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~   41 (257)
T d1xg5a_          11 RLALVTGASGGIGAAVARALVQQGLKVVGCA   41 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            4778888888888888888777787765554

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=93.51  E-value=0.42  Score=33.57  Aligned_cols=67  Identities=21%  Similarity=0.258  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           52 AYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        52 a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +++.+.++..  .++||.. |+....|.-|...+..++.+|...++++..  .+.|++.++.+|++-+....
T Consensus        19 a~~al~~~~~--~~~~g~~-vli~GaG~vG~~~~~~a~~~g~~~vv~~~~--~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2          19 AYRAVKKAAR--TLYPGAY-VAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHHHHHHHT--TCCTTCE-EEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHHHHhhh--ccCCCCE-EEEeCCChHHHHHHHHHHhhcCcccccccc--hhHHHHHHhhcccceeecCc
Confidence            4444444321  3567755 555677999999999999999877666544  36789999999997665544

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=93.48  E-value=0.74  Score=34.53  Aligned_cols=55  Identities=15%  Similarity=0.128  Sum_probs=36.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      +..+||.+++.-|.++|......|.++++.-.... -....+.++..|.+++.+..
T Consensus         3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~   58 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC   58 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEe
Confidence            46789999999999999998888988766543211 12234455666666655543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.36  E-value=0.53  Score=35.49  Aligned_cols=56  Identities=16%  Similarity=0.211  Sum_probs=37.7

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADS  123 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      |+..+||.+++--|.++|..-...|.++++.-.... -....+.++..|.+++.+..
T Consensus        11 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~   67 (255)
T d1fmca_          11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC   67 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEc
Confidence            457889989999999999888888888776543211 12234455666776665554

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.23  E-value=0.21  Score=35.93  Aligned_cols=65  Identities=17%  Similarity=0.202  Sum_probs=45.6

Q ss_pred             CCCCCC--CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHH
Q 028372           63 GLITPG--KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFE  128 (210)
Q Consensus        63 g~~~~~--~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~  128 (210)
                      +.+++|  +..+|.+.+|.-|.+..-.|+.+|.+.++.+..+ +..+.+..+.+|++.+.-..+.++.
T Consensus        24 ~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~-~e~~~~l~~~~gad~vi~~~~~~~~   90 (187)
T d1vj1a2          24 GHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGT-QEKCLFLTSELGFDAAVNYKTGNVA   90 (187)
T ss_dssp             SCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESS-HHHHHHHHHHSCCSEEEETTSSCHH
T ss_pred             hCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccch-HHHHhhhhhcccceEEeeccchhHH
Confidence            445555  4566666789999999999999999877765443 3444555568999888776654443

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=93.17  E-value=0.79  Score=34.51  Aligned_cols=73  Identities=16%  Similarity=0.069  Sum_probs=44.9

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK  140 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~  140 (210)
                      |+..|||..++--|.++|..-...|.++++.-.... -....+.++..|.+++.+..+ .+.++..+..++..++
T Consensus         8 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           8 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            457899999999999999998888988766543211 122344556667766655432 1234444444444443

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=93.17  E-value=0.51  Score=36.07  Aligned_cols=33  Identities=21%  Similarity=0.336  Sum_probs=25.9

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      |+..||+.+++.-|.++|..-...|.++++.-.
T Consensus        25 gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r   57 (294)
T d1w6ua_          25 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR   57 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC
Confidence            357889999999999999887777877766544

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=93.14  E-value=0.62  Score=34.74  Aligned_cols=54  Identities=26%  Similarity=0.203  Sum_probs=38.8

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      |+..+|+..++.-|.++|..-...|.++++.-...  ....+..+.+|.+++.+..
T Consensus         5 gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~   58 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFAREGASLVAVDREE--RLLAEAVAALEAEAIAVVA   58 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHTCCSSEEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHcCCceEEEEe
Confidence            45889999999999999999989898887764432  2233455667777665543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.14  E-value=0.91  Score=33.93  Aligned_cols=74  Identities=18%  Similarity=0.133  Sum_probs=47.3

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHhC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILADSA-LRFEEILEKGEEILKKT  141 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~  141 (210)
                      |+..+||..++--|.++|..-...|.++++.-..... ....+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus         7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4588899999999999999999999987776543211 22344456777776655433 22444444555554444

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=93.06  E-value=0.83  Score=34.38  Aligned_cols=73  Identities=16%  Similarity=0.051  Sum_probs=46.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS-MERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK  140 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~-~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~  140 (210)
                      |++.+|+.+++.-|.++|......|.++++.-..... ....+.++..|.+++.+..+ .+.++..+..++..++
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           6 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            4588999999999999999999999987776543221 23355666777766554332 1233344444444444

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=92.81  E-value=1  Score=33.55  Aligned_cols=72  Identities=17%  Similarity=0.220  Sum_probs=48.2

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK  140 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~  140 (210)
                      |+..+||.+++.-|.++|..-...|.++++.-.. ........++.+|.+++.+..+ .+.++..+..++..++
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~-~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           5 DKLAVITGGANGIGRAIAERFAVEGADIAIADLV-PAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-CCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC-chHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999987776433 3455556677888877766543 1234444444444443

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=92.75  E-value=0.61  Score=35.29  Aligned_cols=73  Identities=16%  Similarity=0.206  Sum_probs=46.7

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHh
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILADSAL-RFEEILEKGEEILKK  140 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~  140 (210)
                      |+..+||.+++.-|.++|..-...|.++++.-....  .....+.++..|.+++.+..+- +.++..+..++..++
T Consensus         7 gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            357788888888999999988888988777655432  2334556677888877665431 233333334444333

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=92.70  E-value=0.8  Score=34.45  Aligned_cols=56  Identities=21%  Similarity=0.227  Sum_probs=37.2

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADS  123 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      |+..+||.+++.-|.++|..-...|.++++.-.... .....+.++..|.+++.+..
T Consensus         5 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~   61 (260)
T d1zema1           5 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVC   61 (260)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEc
Confidence            457889999999999999988888888666543211 12223445666776665543

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=92.64  E-value=0.88  Score=34.16  Aligned_cols=56  Identities=18%  Similarity=0.320  Sum_probs=34.1

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCH---HHHHHHHHcCCEEEEECC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM---ERRIVLRALGAEIILADS  123 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~---~~~~~~~~~Ga~v~~v~~  123 (210)
                      |+..+||..++.-|.++|..-...|.++++.-..+...   ...+.....|.++..+..
T Consensus         4 gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~   62 (260)
T d1x1ta1           4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA   62 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECC
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEEC
Confidence            44778888888889999888888888766554332111   111122345666665553

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=92.60  E-value=0.85  Score=34.42  Aligned_cols=31  Identities=23%  Similarity=0.297  Sum_probs=23.6

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIV   98 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vv   98 (210)
                      |+..+|+.+++--|.++|......|.++++.
T Consensus         6 gKvalITGas~GIG~aia~~la~~Ga~V~i~   36 (268)
T d2bgka1           6 DKVAIITGGAGGIGETTAKLFVRYGAKVVIA   36 (268)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEE
Confidence            4577888888888999888877777665554

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=92.57  E-value=0.68  Score=34.92  Aligned_cols=33  Identities=27%  Similarity=0.233  Sum_probs=26.1

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      |+..+||.+++.-|.++|..-...|.++++.-.
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r   36 (258)
T d1iy8a_           4 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV   36 (258)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            457888899999999999988888887666543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=92.45  E-value=0.87  Score=34.09  Aligned_cols=69  Identities=22%  Similarity=0.167  Sum_probs=45.6

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHh
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKK  140 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~  140 (210)
                      |+..+||.+++.-|.++|..-...|.++++.-...   .+.+..+..+.+.+.++-. +.++..+..++..++
T Consensus         5 GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~---~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           5 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP---EGKEVAEAIGGAFFQVDLE-DERERVRFVEEAAYA   73 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST---THHHHHHHHTCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH---HHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHHHHh
Confidence            45889999999999999999999998876654332   2344556667777766643 244444444444443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=92.37  E-value=0.72  Score=34.57  Aligned_cols=32  Identities=22%  Similarity=0.289  Sum_probs=23.9

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      |+..+||.+++--|.++|..-...|.++++.-
T Consensus         6 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~   37 (251)
T d1zk4a1           6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITG   37 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            45778888888888888877777777755543

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.34  E-value=1.3  Score=33.06  Aligned_cols=72  Identities=11%  Similarity=0.149  Sum_probs=43.3

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHhC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSA-LRFEEILEKGEEILKKT  141 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~~  141 (210)
                      ..+||.+++.-|.++|..-...|.++++.-.... -....+.++..|.+++.+..+ .+.++..+..++..++.
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL   76 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            4578888899999999988888988766543221 122344556677777655432 12344444444444443

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.26  E-value=1.2  Score=33.37  Aligned_cols=31  Identities=19%  Similarity=0.351  Sum_probs=26.3

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIV   98 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vv   98 (210)
                      |+..+||.+++.-|.++|......|.++++.
T Consensus         6 GK~alITGas~GIG~aia~~la~~Ga~V~i~   36 (250)
T d1ydea1           6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVIC   36 (250)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEE
Confidence            4588999999999999999988888887665

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=91.98  E-value=1.2  Score=33.32  Aligned_cols=42  Identities=10%  Similarity=0.127  Sum_probs=31.8

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHH
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRI  109 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~  109 (210)
                      |+..+||.+++--|.++|..-...|.+++++...........
T Consensus         5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~   46 (254)
T d1sbya1           5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALA   46 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHH
Confidence            457788888888899999888888998888876654444333

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=91.89  E-value=0.61  Score=32.92  Aligned_cols=60  Identities=23%  Similarity=0.211  Sum_probs=46.7

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .+.+.+++|.+ |+....|--|......|+.+|...+++++.  .+.|++..+.+||+-....
T Consensus        20 ~~~a~~~~G~~-VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~--~~~kl~~a~~lGa~~~i~~   79 (174)
T d1p0fa2          20 VNTAKVTPGST-CAVFGLGGVGFSAIVGCKAAGASRIIGVGT--HKDKFPKAIELGATECLNP   79 (174)
T ss_dssp             HTTTCCCTTCE-EEEECCSHHHHHHHHHHHHHTCSEEEEECS--CGGGHHHHHHTTCSEEECG
T ss_pred             HHhhCCCCCCE-EEEECCCchhHHHHHHHHHcCCceeeccCC--hHHHHHHHHHcCCcEEEcC
Confidence            45667889865 445567999999999999999987777665  4788888999999876543

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=91.72  E-value=1.1  Score=29.62  Aligned_cols=49  Identities=12%  Similarity=0.141  Sum_probs=38.6

Q ss_pred             EEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           72 LIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        72 vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ++....|+.|..+|-.-...|++++++=.   .+.+.+.++..|..++.-+.
T Consensus         3 ~iIiG~G~~G~~la~~L~~~g~~vvvid~---d~~~~~~~~~~~~~~~~gd~   51 (134)
T d2hmva1           3 FAVIGLGRFGGSIVKELHRMGHEVLAVDI---NEEKVNAYASYATHAVIANA   51 (134)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCCEEEES---CHHHHHHTTTTCSEEEECCT
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEecC---cHHHHHHHHHhCCcceeeec
Confidence            55568899999999999999999888733   56777777788887776553

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.64  E-value=0.086  Score=32.88  Aligned_cols=50  Identities=14%  Similarity=0.081  Sum_probs=38.5

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      ++|..-.+|..|+-++.+|+.+|++++++-|+..++...     .-.+++..+-+
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~-----~a~dvIT~e~E   51 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVP-----FQQSVITAEIE   51 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCGGGSC-----GGGSEEEESSS
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCCcccc-----cccceEEEeec
Confidence            457778999999999999999999999999876544321     13467777654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=91.57  E-value=0.43  Score=33.87  Aligned_cols=60  Identities=25%  Similarity=0.236  Sum_probs=46.9

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .+.+.+++|.+ |+....|--|...+..++.+|-+.+++++.  ++.|++..+.+|++.+...
T Consensus        21 ~~~a~v~~G~~-VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~--~~~r~~~a~~~Ga~~~i~~   80 (174)
T d1e3ia2          21 INTAKVTPGST-CAVFGLGCVGLSAIIGCKIAGASRIIAIDI--NGEKFPKAKALGATDCLNP   80 (174)
T ss_dssp             HTTSCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCSEEECG
T ss_pred             HHhhCCCCCCE-EEEECCChHHHHHHHHHHHhCCceeeeecc--chHHHHHHHHhCCCcccCC
Confidence            45667888855 555678999999999999999987777665  4568889999999776543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=91.38  E-value=0.65  Score=34.65  Aligned_cols=61  Identities=26%  Similarity=0.265  Sum_probs=45.5

Q ss_pred             CCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcC-----CCCHHHHHHHHHcCCEEEEECCC
Q 028372           64 LITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPS-----TCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        64 ~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~-----~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      .++|+.+.+|+..+|.-|.++|..-...|.+.++++..     ......++.++..|+++..+..+
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~D   70 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD   70 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECC
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccc
Confidence            35677788999999999999999988889975555532     22344566778899998877654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.36  E-value=0.78  Score=34.45  Aligned_cols=30  Identities=17%  Similarity=0.330  Sum_probs=22.4

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLII   97 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~v   97 (210)
                      |+..+||.+++.-|.++|..-...|.++++
T Consensus         6 gK~alITGas~GIG~aia~~la~~Ga~V~~   35 (253)
T d1hxha_           6 GKVALVTGGASGVGLEVVKLLLGEGAKVAF   35 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence            357788888888888888777777766544

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=91.14  E-value=1.3  Score=33.06  Aligned_cols=74  Identities=19%  Similarity=0.134  Sum_probs=45.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT  141 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~~  141 (210)
                      ++..+||.+++.-|.++|..-...|.+++++-.... -....+.++.+|.++..+..+- +.++..+..++..++.
T Consensus        10 nKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            347788888888999999888888988766543211 1223445667777776655431 2344444445554443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=90.99  E-value=1.6  Score=32.79  Aligned_cols=73  Identities=21%  Similarity=0.265  Sum_probs=48.4

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK  140 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~  140 (210)
                      |++.+|+..++.-|.++|..-...|.++++.-.....  ....+.++..|.+++.+..+ .+.++..+..++..++
T Consensus        18 gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          18 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            4588999999999999999999999998776554322  23355667778777765543 2234444444444443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=90.92  E-value=1.3  Score=31.51  Aligned_cols=95  Identities=21%  Similarity=0.164  Sum_probs=56.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEEcC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADSALRFEEILEKGEEILKKTPDGYLLR  148 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~~~  148 (210)
                      .+.|+.-.+|..|.+.|..+++.|+++++|=.....-..+....       ..+....+.+..+...+..++.+-.+.++
T Consensus        43 ~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~~~GG~l~~~~-------~~p~~~~~~~~~~~~~~~~~~~gV~i~l~  115 (179)
T d1ps9a3          43 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK-------QIPGKEEFYETLRYYRRMIEVTGVTLKLN  115 (179)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT-------TSTTCTTHHHHHHHHHHHHHHHTCEEEES
T ss_pred             CcEEEEECccHHHHHHHHHHHhhccceEEEeccCccCceEEEEE-------eCcccchHHHHHHHHHHhhhcCCeEEEeC
Confidence            36688899999999999999999999999966543322222110       12222334555554444444443334443


Q ss_pred             CCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCchh
Q 028372          149 QFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTGG  186 (210)
Q Consensus       149 ~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~Gg  186 (210)
                      ..-.                .+...++|+||++.|...
T Consensus       116 ~~Vt----------------~~~~~~~d~vilAtG~~~  137 (179)
T d1ps9a3         116 HTVT----------------ADQLQAFDETILASGIPN  137 (179)
T ss_dssp             CCCC----------------SSSSCCSSEEEECCCEEC
T ss_pred             CEEc----------------ccccccceeEEEeecCCC
Confidence            2110                011245788999888643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.79  E-value=0.76  Score=34.42  Aligned_cols=32  Identities=22%  Similarity=0.292  Sum_probs=25.3

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      |+..+||.+++--|.++|......|.++++.-
T Consensus         3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~   34 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVD   34 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            45778889888899999988888787766654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=90.73  E-value=0.43  Score=33.40  Aligned_cols=59  Identities=15%  Similarity=0.254  Sum_probs=44.0

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      .+.+.++||.+.+| ...|-.|......++.+|.+.++++..  ++.|++..+.+||+-...
T Consensus        21 ~~~~~~~~G~tVlI-~GaGGvG~~aiq~ak~~G~~~vi~~~~--~~~k~~~ak~lGa~~~i~   79 (176)
T d2fzwa2          21 VNTAKLEPGSVCAV-FGLGGVGLAVIMGCKVAGASRIIGVDI--NKDKFARAKEFGATECIN   79 (176)
T ss_dssp             HTTTCCCTTCEEEE-ECCSHHHHHHHHHHHHHTCSEEEEECS--CGGGHHHHHHHTCSEEEC
T ss_pred             HHhhCCCCCCEEEE-ecchhHHHHHHHHHHHHhcCceEEEcc--cHHHHHHHHHhCCcEEEe
Confidence            35677889866555 455667888888899999988887744  577788899999876543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=90.70  E-value=0.58  Score=33.15  Aligned_cols=60  Identities=20%  Similarity=0.272  Sum_probs=46.0

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .+.+.+++|.. |+....|-.|......|+.+|..-+++++.  .+.|++..+.+||+.++-.
T Consensus        22 ~~~~~~~~g~t-VlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~--~~~kl~~Ak~~GA~~~in~   81 (176)
T d1d1ta2          22 VKTGKVKPGST-CVVFGLGGVGLSVIMGCKSAGASRIIGIDL--NKDKFEKAMAVGATECISP   81 (176)
T ss_dssp             HTTSCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHHTCSEEECG
T ss_pred             HHhhCCCCCCE-EEEECCCchhHHHHHHHHHcCCceEEEecC--cHHHHHHHHhcCCcEEECc
Confidence            45566788854 566678999999999999999876666654  4678889999999876644

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=90.48  E-value=1.7  Score=29.49  Aligned_cols=51  Identities=12%  Similarity=0.096  Sum_probs=32.5

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC-CHHHHHHHHHcCCEEEE
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC-SMERRIVLRALGAEIIL  120 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~-~~~~~~~~~~~Ga~v~~  120 (210)
                      .+++....|+.|..++..-...|.+++++..... ........+..|..++.
T Consensus         4 nHiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~   55 (153)
T d1id1a_           4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIP   55 (153)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEE
Confidence            4577788899999999888888888877654321 12233333344555543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=90.45  E-value=1.6  Score=32.42  Aligned_cols=36  Identities=22%  Similarity=0.291  Sum_probs=27.6

Q ss_pred             CCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           63 GLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        63 g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      |+|+ |+..+||.+++.-|.++|..-...|.++++.-
T Consensus         2 G~L~-gK~alITGas~GIG~aia~~la~~G~~V~~~~   37 (244)
T d1nffa_           2 GRLT-GKVALVSGGARGMGASHVRAMVAEGAKVVFGD   37 (244)
T ss_dssp             CTTT-TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cccC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            4444 45788899999999999998888888766543

>d1t57a_ c.49.1.2 (A:) Hypothetical protein MTH1675 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Pyruvate kinase C-terminal domain-like
superfamily: PK C-terminal domain-like
family: MTH1675-like
domain: Hypothetical protein MTH1675
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.36  E-value=0.44  Score=34.21  Aligned_cols=74  Identities=19%  Similarity=0.242  Sum_probs=52.7

Q ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc---------CCCCHHHHHHHHH
Q 028372           43 PCSSVKDRIAYSMIKDAEDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP---------STCSMERRIVLRA  113 (210)
Q Consensus        43 ptGS~K~R~a~~~~~~a~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp---------~~~~~~~~~~~~~  113 (210)
                      |.-.+=...+...+.+|.|.|.    +..|+.+++|.++..++-+.   .-++++|..         ...++..++.++.
T Consensus        11 ~G~~NT~~~l~~a~~ra~elgi----~~iVvAStsG~TA~~~~e~~---~~~lvvVth~~GF~~pg~~e~~~e~~~~L~~   83 (186)
T d1t57a_          11 PGKENTERVLELVGERADQLGI----RNFVVASVSGETALRLSEMV---EGNIVSVTHHAGFREKGQLELEDEARDALLE   83 (186)
T ss_dssp             CSGGGHHHHHHHHHHHHHHHTC----CEEEEECSSSHHHHHHHTTC---CSEEEEECCCTTSSSTTCCSSCHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHcCC----CeEEEEeCCcHHHHHHHHhc---CCCEEEEecccCCCCCCCCccCHHHHHHHHH
Confidence            4446777888888999999885    36666677799986654433   336555542         1347889999999


Q ss_pred             cCCEEEEECC
Q 028372          114 LGAEIILADS  123 (210)
Q Consensus       114 ~Ga~v~~v~~  123 (210)
                      .|.+|+.-..
T Consensus        84 ~G~~V~t~tH   93 (186)
T d1t57a_          84 RGVNVYAGSH   93 (186)
T ss_dssp             HTCEEECCSC
T ss_pred             cCCEEEEecc
Confidence            9999987664

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=90.19  E-value=0.69  Score=34.73  Aligned_cols=74  Identities=20%  Similarity=0.282  Sum_probs=52.4

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC--HHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS--MERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT  141 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~~  141 (210)
                      |+..+|+.+++--|.++|..-...|.++++....+..  ....+.++.+|.+++.+..+- +.++..+..++..++.
T Consensus         6 GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           6 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            4577888888889999999999999999876665433  334667788999888776542 3455555555555543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=89.07  E-value=3.2  Score=31.84  Aligned_cols=55  Identities=18%  Similarity=0.135  Sum_probs=41.9

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ++.+|+.++|.-|.+++..-...|.++++++.+..+..........|++++..+-
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~   58 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPL   58 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCC
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeC
Confidence            5788999999999999999888999999999865554443333444777766553

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=88.98  E-value=1.1  Score=34.01  Aligned_cols=32  Identities=31%  Similarity=0.374  Sum_probs=25.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      |+..+||..++.-|.++|..-...|.++++.-
T Consensus         4 gK~alITGas~GIG~aia~~la~~Ga~V~~~~   35 (274)
T d1xhla_           4 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITG   35 (274)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEE
Confidence            45778888888899999988888888766654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.95  E-value=2.5  Score=31.59  Aligned_cols=29  Identities=28%  Similarity=0.484  Sum_probs=14.0

Q ss_pred             EEeeCCCchHHHHHHH---HHHcCCcEEEEEc
Q 028372           72 LIEVTSGNTGVGLAFI---AAARGYNLIIVMP  100 (210)
Q Consensus        72 vv~~ssGN~g~alA~~---a~~~g~~~~vvvp  100 (210)
                      |+.-|+|+.|.+.+.+   ++..|.++++...
T Consensus         5 VAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r   36 (275)
T d1wmaa1           5 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR   36 (275)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHHSSSEEEEEES
T ss_pred             EEEECCCCCHHHHHHHHHHHHhCCCEEEEEEC
Confidence            4444555555555444   3333555554443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=88.91  E-value=1.9  Score=32.45  Aligned_cols=32  Identities=31%  Similarity=0.335  Sum_probs=23.7

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      |+..+||..++.-|.++|..-...|.++++.-
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~l~~   36 (272)
T d1xkqa_           5 NKTVIITGSSNGIGRTTAILFAQEGANVTITG   36 (272)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEE
Confidence            35778888888888888887777776655543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=88.69  E-value=3.3  Score=30.46  Aligned_cols=69  Identities=20%  Similarity=0.124  Sum_probs=42.9

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHH-HHHHHcCCEEEEECCCCCHHHHHHHHHHHHHh
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERR-IVLRALGAEIILADSALRFEEILEKGEEILKK  140 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~-~~~~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~  140 (210)
                      |+..+||.+++--|.++|..-...|.++++.-..   ..++ +..+.++++.+.+|-. +.++..+..++..++
T Consensus         5 gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~---~~~l~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIE---EGPLREAAEAVGAHPVVMDVA-DPASVERGFAEALAH   74 (242)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTTCEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence            3577888988889999999988889887665432   2222 2335566666666543 234444444444333

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=88.58  E-value=2.1  Score=31.92  Aligned_cols=53  Identities=25%  Similarity=0.230  Sum_probs=34.6

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      |+..+||..++--|.++|..-...|.++++.-..  .....+..+.+|.++..+.
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~--~~~~~~~~~~~~~~~~~~~   57 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVL--DEEGAATARELGDAARYQH   57 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC--HHHHHHHHHTTGGGEEEEE
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHhCCceEEEE
Confidence            4578899999989999999888888886665332  1222333455555554443

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.40  E-value=4.1  Score=30.99  Aligned_cols=33  Identities=15%  Similarity=0.232  Sum_probs=26.2

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEc
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMP  100 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp  100 (210)
                      |+..+||.+++.-|.++|..-...|.++++.-.
T Consensus        12 gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r   44 (297)
T d1yxma1          12 GQVAIVTGGATGIGKAIVKELLELGSNVVIASR   44 (297)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence            457899999999999999888888887666543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=87.90  E-value=1.6  Score=30.31  Aligned_cols=59  Identities=17%  Similarity=0.237  Sum_probs=40.7

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEE
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILA  121 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v  121 (210)
                      .+.+.+++|.+.+|. ..|--|...+..++.+|-..++.+..  .+.|++.++.+||+-...
T Consensus        21 ~~~a~~k~g~~VlI~-G~Gg~g~~~~~~~~~~g~~~Vi~~~~--~~~rl~~a~~~GAd~~in   79 (175)
T d1cdoa2          21 VNTAKVEPGSTCAVF-GLGAVGLAAVMGCHSAGAKRIIAVDL--NPDKFEKAKVFGATDFVN   79 (175)
T ss_dssp             HTTTCCCTTCEEEEE-CCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCCEEEC
T ss_pred             HHhhCCCCCCEEEEE-ecCCccchHHHHHHHHhhchheeecc--hHHHHHHHHHcCCcEEEc
Confidence            355678888664444 55666667777777788776666543  467888899999966554

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=87.38  E-value=4.3  Score=30.10  Aligned_cols=32  Identities=25%  Similarity=0.275  Sum_probs=23.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      |+..+||.+++--|.++|..-...|.++++.-
T Consensus         5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~   36 (264)
T d1spxa_           5 EKVAIITGSSNGIGRATAVLFAREGAKVTITG   36 (264)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEE
Confidence            34778888888888888887777776655543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=86.80  E-value=3.2  Score=30.84  Aligned_cols=74  Identities=15%  Similarity=0.177  Sum_probs=51.0

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHH--HHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSME--RRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT  141 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~--~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~~  141 (210)
                      |+..+||.+++.-|.++|..-...|.++++.-.......  ..+..+.+|.+++.+..+- +.++..+..++..++.
T Consensus         9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            457788999999999999999999999888766544332  2334466788887666432 3455555566666654

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=86.78  E-value=2.6  Score=31.34  Aligned_cols=53  Identities=21%  Similarity=0.187  Sum_probs=34.4

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      |+..+||.+++--|.++|..-...|.++++.-..  ...-.+..+.+|.++..+.
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~--~~~l~~~~~~~~~~~~~~~   57 (256)
T d1k2wa_           5 GKTALITGSARGIGRAFAEAYVREGARVAIADIN--LEAARATAAEIGPAACAIA   57 (256)
T ss_dssp             TEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESC--HHHHHHHHHHHCTTEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHHHhCCceEEEE
Confidence            4577889999999999999888888876665322  1222223345566555444

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=86.27  E-value=2.7  Score=29.09  Aligned_cols=60  Identities=18%  Similarity=0.183  Sum_probs=43.6

Q ss_pred             HHcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           60 EDKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        60 ~~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .+.+.++||.+ |+....|--|...+..++.+|...++++..  .+.|++..+.+|++-....
T Consensus        21 ~~~~~vk~Gdt-VlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~--~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2          21 VKVAKVTQGST-CAVFGLGGVGLSVIMGCKAAGAARIIGVDI--NKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             HTTTCCCTTCE-EEEECCSHHHHHHHHHHHHTTCSEEEEECS--CGGGHHHHHHTTCSEEECG
T ss_pred             HHhhCCCCCCE-EEEECCCCcHHHHHHHHHHcCCceEEeecC--cHHHHHHHHHhCCeeEEec
Confidence            45678889865 444555668888888899999877777654  4677778888998755543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=85.98  E-value=2.1  Score=31.89  Aligned_cols=73  Identities=18%  Similarity=0.106  Sum_probs=46.3

Q ss_pred             CCeEEEeeCCCc--hHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE--ECCCCCHHHHHHHHHHHHHhC
Q 028372           68 GKTTLIEVTSGN--TGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL--ADSALRFEEILEKGEEILKKT  141 (210)
Q Consensus        68 ~~~~vv~~ssGN--~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~--v~~~~~~~~~~~~a~~~~~~~  141 (210)
                      |++.+|+..+|+  -|.|+|..-...|.++++.-.+.....+.+.+...|.....  .+.. +..+..+...+..+..
T Consensus         5 gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           5 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVS-KEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeeccc-chhhHHHHHHHHHHHc
Confidence            457788877665  78888888889999999887765555666666555554433  3332 2334444444554443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=85.95  E-value=1.2  Score=30.88  Aligned_cols=48  Identities=23%  Similarity=0.187  Sum_probs=38.6

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEE
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIIL  120 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~  120 (210)
                      +++....+|+.|.++|...+..|++++++.+   .+.+.+.++..|.....
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~   49 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDI---DAQRIKEIQDRGAIIAE   49 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECS---CHHHHHHHHHHTSEEEE
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCEEEEEEC---CHHHHHHHHHcCCCchh
Confidence            4577889999999999999999999998865   45677777777765543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=84.82  E-value=3.2  Score=30.57  Aligned_cols=32  Identities=34%  Similarity=0.366  Sum_probs=26.5

Q ss_pred             CCeEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           68 GKTTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        68 ~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      |+..+||.+++.-|.++|......|.++++.-
T Consensus         4 gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~   35 (243)
T d1q7ba_           4 GKIALVTGASRGIGRAIAETLAARGAKVIGTA   35 (243)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEe
Confidence            45788999999999999999888898876654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.49  E-value=2.1  Score=27.70  Aligned_cols=33  Identities=21%  Similarity=0.303  Sum_probs=29.7

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +.++.-.+|..|.-+|.+.+.+|.+++++-..+
T Consensus        23 ~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          23 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECCCccceeeeeeecccccEEEEEEecc
Confidence            568889999999999999999999999997654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.37  E-value=0.47  Score=33.41  Aligned_cols=32  Identities=19%  Similarity=0.299  Sum_probs=27.5

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCc-EEEEEcC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYN-LIIVMPS  101 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~-~~vvvp~  101 (210)
                      ++|+.-.+|+.|...|..++++|++ +++|-..
T Consensus         5 ~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~   37 (196)
T d1gtea4           5 AKIALLGAGPASISCASFLARLGYSDITIFEKQ   37 (196)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred             CEEEEECChHHHHHHHHHHHHCCCCeEEEEEec
Confidence            4588899999999999999999994 8887543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.59  E-value=1.8  Score=28.53  Aligned_cols=33  Identities=21%  Similarity=0.208  Sum_probs=29.8

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +.++.-.+|.-|.-+|.+.+.+|.+++++.+.+
T Consensus        23 k~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence            568889999999999999999999999998764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=83.57  E-value=1.8  Score=32.26  Aligned_cols=54  Identities=19%  Similarity=0.317  Sum_probs=38.8

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHH---HHHHHHcCCEEEEEC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMER---RIVLRALGAEIILAD  122 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~---~~~~~~~Ga~v~~v~  122 (210)
                      ++.+|+.++|.-|..++......|.++++++....  ...+   .......+.+++..+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d   62 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS   62 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEee
Confidence            47789999999999999998899999999986533  2222   333445566665443

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=83.28  E-value=1.6  Score=28.33  Aligned_cols=33  Identities=18%  Similarity=0.133  Sum_probs=29.4

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +.++...+|..|.-+|...+.+|.+++++-..+
T Consensus        22 ~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECCChhhHHHHHHhhccccEEEEEeecc
Confidence            458889999999999999999999999997654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.07  E-value=1.7  Score=28.65  Aligned_cols=33  Identities=15%  Similarity=0.159  Sum_probs=29.3

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +.++.-.+|.-|.-+|.+.+.+|.+++++.++.
T Consensus        21 ~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          21 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CeEEEECCCccHHHHHHHHhhcCCeEEEEEech
Confidence            457888999999999999999999999998653

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=82.99  E-value=5.3  Score=28.69  Aligned_cols=68  Identities=25%  Similarity=0.273  Sum_probs=47.4

Q ss_pred             hHHHHHHHHHHH-HcCCCCCCCeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEE
Q 028372           49 DRIAYSMIKDAE-DKGLITPGKTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEII  119 (210)
Q Consensus        49 ~R~a~~~~~~a~-~~g~~~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~  119 (210)
                      .+|..+.+..+. ..|.-.-..++|+.-..||.|..+|......|.+++++-   ....++.....+|++.+
T Consensus         6 a~Gv~~~~~~~~~~~g~~~L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d---~d~~~~~~~~~~g~~~~   74 (201)
T d1c1da1           6 AVGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVAD---TDTERVAHAVALGHTAV   74 (201)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC---SCHHHHHHHHHTTCEEC
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEec---chHHHHHHHHhhccccc
Confidence            356666666553 344212223678888999999999999999999987542   34566666777888764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=81.81  E-value=3.7  Score=30.24  Aligned_cols=72  Identities=11%  Similarity=0.169  Sum_probs=49.1

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCC--CHHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHhC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTC--SMERRIVLRALGAEIILADSAL-RFEEILEKGEEILKKT  141 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~--~~~~~~~~~~~Ga~v~~v~~~~-~~~~~~~~a~~~~~~~  141 (210)
                      ..+||.+++.-|+++|..-...|.++++....+.  .....+.++.+|.+++.+..+- +.++..+..++..++.
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4577888888999999999999999887654432  2334566778899988776432 3445555556665554

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=81.60  E-value=3.6  Score=26.82  Aligned_cols=33  Identities=27%  Similarity=0.366  Sum_probs=29.9

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +.++.-.+|..|.-+|.+.+.+|.+++++.+..
T Consensus        31 ~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          31 SRLLIVGGGVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEECcchhHHHHHHHhhcccceEEEEeecc
Confidence            568889999999999999999999999998764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=81.18  E-value=6.2  Score=28.82  Aligned_cols=72  Identities=15%  Similarity=0.151  Sum_probs=40.3

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCc------EEEEEcCCCC--HHHHHHHHHcCCEEEEECCC-CCHHHHHHHHHHHHHh
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYN------LIIVMPSTCS--MERRIVLRALGAEIILADSA-LRFEEILEKGEEILKK  140 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~------~~vvvp~~~~--~~~~~~~~~~Ga~v~~v~~~-~~~~~~~~~a~~~~~~  140 (210)
                      ..+||.+++--|.++|..-...|.+      .++....+..  ....+.++..|.++..+..+ .+.++..+..++..++
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3567888888888888888888877      2333333221  22234456667777665432 1233444444444444


Q ss_pred             C
Q 028372          141 T  141 (210)
Q Consensus       141 ~  141 (210)
                      .
T Consensus        83 ~   83 (240)
T d2bd0a1          83 Y   83 (240)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=80.97  E-value=8.4  Score=28.26  Aligned_cols=103  Identities=12%  Similarity=0.064  Sum_probs=53.0

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCH--HHHHHH-HHcCCEEEEECCCCCHHHHHHHHHHHHHhCCCeEE
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSM--ERRIVL-RALGAEIILADSALRFEEILEKGEEILKKTPDGYL  146 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~--~~~~~~-~~~Ga~v~~v~~~~~~~~~~~~a~~~~~~~~~~~~  146 (210)
                      ..|||.+++.-|.++|..-...|.++++....+...  ...+.+ ...+...+.+..+....          ...+... 
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~----------~~~~~~~-   72 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV----------ATAPVSG-   72 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS----------CBCCCC--
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccc----------ccccccc-
Confidence            346777777888888888888888877655433211  111122 23444444443221000          0000000 


Q ss_pred             cCCCCCChhHHHHHHhHHHHHHHhhCCCCCEEEEccCch
Q 028372          147 LRQFENPANPKIHYETTGPEIWQDSGGKVDAFISGIGTG  185 (210)
Q Consensus       147 ~~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~G  185 (210)
                      .....+... ......+..++.+++ +++|.+|..+|..
T Consensus        73 ~~~~~dv~~-~~~v~~~~~~~~~~~-G~iDiLVnnAG~~  109 (284)
T d1e7wa_          73 ADGSAPVTL-FTRCAELVAACYTHW-GRCDVLVNNASSF  109 (284)
T ss_dssp             ---CCCBCH-HHHHHHHHHHHHHHH-SCCCEEEECCCCC
T ss_pred             ccccccCCC-HHHHHHHHHHHHHHh-CCCCEEEecCCcc
Confidence            000012222 334456667778888 6899999998864

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.90  E-value=2.9  Score=29.56  Aligned_cols=52  Identities=21%  Similarity=0.280  Sum_probs=38.1

Q ss_pred             CeEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Q 028372           69 KTTLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILADS  123 (210)
Q Consensus        69 ~~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~  123 (210)
                      ++.+|+..+|+-|.+++......|.+++++.+..   .+.......+.+++..+-
T Consensus         4 kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~---~~~~~~~~~~~~~~~gD~   55 (205)
T d1hdoa_           4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS---SRLPSEGPRPAHVVVGDV   55 (205)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG---GGSCSSSCCCSEEEESCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcCh---hhcccccccccccccccc
Confidence            3678888899999999999888999999998642   222222345777776664

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=80.37  E-value=4  Score=29.10  Aligned_cols=49  Identities=16%  Similarity=0.236  Sum_probs=39.9

Q ss_pred             EEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Q 028372           71 TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCSMERRIVLRALGAEIILAD  122 (210)
Q Consensus        71 ~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~  122 (210)
                      .|+.-..|+.|...+..|..+|-.++++   +....++++++.+|++.+.+.
T Consensus        31 ~VvViGaGvaG~~Aa~~A~~lGA~V~v~---D~~~~~~~~l~~l~~~~i~~~   79 (183)
T d1l7da1          31 RVLVFGVGVAGLQAIATAKRLGAVVMAT---DVRAATKEQVESLGGKFITVD   79 (183)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEE---CSCSTTHHHHHHTTCEECCC-
T ss_pred             EEEEEcCcHHHHHHHHHHHHcCCEEEEE---eccHHHHHHHHHhhcceEEEe
Confidence            5777899999999999999999998887   334567788888999887654

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=80.36  E-value=1.2  Score=34.87  Aligned_cols=55  Identities=9%  Similarity=-0.001  Sum_probs=42.7

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCC--cEEEEEcCCCCHHHHHHHHHcCCEEEEECCC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGY--NLIIVMPSTCSMERRIVLRALGAEIILADSA  124 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~--~~~vvvp~~~~~~~~~~~~~~Ga~v~~v~~~  124 (210)
                      +.++..+||..|..+|+.+-..+.  +-.|++|..+.......+...|++.++++.+
T Consensus        47 k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~~t~~a~~~ai~~~G~~pv~vDi~  103 (371)
T d2fnua1          47 KHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLLESGYTPVFAGIK  103 (371)
T ss_dssp             SEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHHHTTCEEEECCBC
T ss_pred             CeEEEEecHHHHHHHHHHHhcccCCCCCeeecccccccccceeeeccCccccccccc
Confidence            567888888887776666544432  2378889988889999999999999999854

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=80.26  E-value=6.3  Score=26.38  Aligned_cols=56  Identities=20%  Similarity=0.077  Sum_probs=39.4

Q ss_pred             CCCCCe-EEEeeCCCchHHHHHHHHHHcCCcEEEEEcCCCC---------HHHHHHHHHcCCEEEE
Q 028372           65 ITPGKT-TLIEVTSGNTGVGLAFIAAARGYNLIIVMPSTCS---------MERRIVLRALGAEIIL  120 (210)
Q Consensus        65 ~~~~~~-~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~~~---------~~~~~~~~~~Ga~v~~  120 (210)
                      ..+++. .|+...+|-.|..+|.+-+.+|.+++++.+....         ..-.+.|+..|.+++.
T Consensus        36 ~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~~~~~~~~~~~~~~l~~~GV~i~~  101 (156)
T d1djqa2          36 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANYMHFTLEYPNMMRRLHELHVEELG  101 (156)
T ss_dssp             SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTTHHHHTTCHHHHHHHHHHTTCEEEE
T ss_pred             cccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccccccchhHHHHHHHHHhhccceEEe
Confidence            344433 2334588999999999999999999999986532         2335556667776654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=80.14  E-value=2.6  Score=27.47  Aligned_cols=33  Identities=21%  Similarity=0.163  Sum_probs=29.5

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEEcCC
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVMPST  102 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvvp~~  102 (210)
                      +.++.-.+|..|.-+|.+.+.+|.+++++...+
T Consensus        23 ~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          23 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence            568889999999999999999999999998654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.06  E-value=0.86  Score=32.30  Aligned_cols=30  Identities=27%  Similarity=0.193  Sum_probs=27.0

Q ss_pred             eEEEeeCCCchHHHHHHHHHHcCCcEEEEE
Q 028372           70 TTLIEVTSGNTGVGLAFIAAARGYNLIIVM   99 (210)
Q Consensus        70 ~~vv~~ssGN~g~alA~~a~~~g~~~~vvv   99 (210)
                      ..|+.-.+|+.|...|..++++|++++++-
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~~v~vie   35 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAELKPLLFE   35 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCcEEEEE
Confidence            568889999999999999999999998873