Citrus Sinensis ID: 028418
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 209 | ||||||
| 224073720 | 306 | predicted protein [Populus trichocarpa] | 0.909 | 0.620 | 0.705 | 4e-70 | |
| 225442154 | 303 | PREDICTED: uncharacterized protein LOC10 | 0.923 | 0.636 | 0.645 | 1e-63 | |
| 255560651 | 302 | conserved hypothetical protein [Ricinus | 0.937 | 0.649 | 0.653 | 4e-62 | |
| 356561047 | 312 | PREDICTED: uncharacterized protein LOC10 | 0.904 | 0.605 | 0.628 | 4e-60 | |
| 356522384 | 316 | PREDICTED: uncharacterized protein LOC10 | 0.904 | 0.598 | 0.605 | 3e-59 | |
| 79378061 | 312 | Rossmann-fold NAD(P)-binding domain-cont | 0.942 | 0.631 | 0.580 | 9e-58 | |
| 297842009 | 311 | hypothetical protein ARALYDRAFT_476397 [ | 0.928 | 0.623 | 0.560 | 1e-54 | |
| 51969936 | 311 | unnamed protein product [Arabidopsis tha | 0.947 | 0.636 | 0.566 | 2e-54 | |
| 79321173 | 311 | Rossmann-fold NAD(P)-binding domain-cont | 0.947 | 0.636 | 0.566 | 3e-54 | |
| 37991868 | 310 | expressed protein [Oryza sativa Japonica | 0.784 | 0.529 | 0.628 | 3e-52 |
| >gi|224073720|ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|222841574|gb|EEE79121.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/200 (70%), Positives = 159/200 (79%), Gaps = 10/200 (5%)
Query: 4 TAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIE 63
TA PST QTS +F SQ ++ +PS LIF + L RCSAKKKISFVDQILDYIE
Sbjct: 3 TALPSTAFCQTS-FTFPSQNPC-KVKSPS-LIFRTKSHGLIRCSAKKKISFVDQILDYIE 59
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP----EEARDAVLVTDGDSDIGQMVILSL 119
GGPKLRKWYGAPDLLPKDGS+ EDE DE P E RDAVLVTDGDS+IGQM+ILSL
Sbjct: 60 GGPKLRKWYGAPDLLPKDGSDTEDE---DELPGNALNEVRDAVLVTDGDSEIGQMIILSL 116
Query: 120 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 179
IVK+ R+KALVKDKR AME+FGTYVESMAGDAS+K FLK ALRGVR+IICP+EGF+SN G
Sbjct: 117 IVKKARVKALVKDKRTAMEAFGTYVESMAGDASSKPFLKKALRGVRAIICPNEGFLSNGG 176
Query: 180 SLKGVQHVILLSQRQRWHSS 199
L+GV+HVILLSQ + S
Sbjct: 177 DLQGVKHVILLSQLSVYRGS 196
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442154|ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246327 [Vitis vinifera] gi|297743019|emb|CBI35886.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 152/203 (74%), Gaps = 10/203 (4%)
Query: 1 MAGTAFPSTLVIQTSHIS-FTSQKKSFELANPSSLIFNFEKK-VLFRCSAKKKISFVDQI 58
MAG P H S F S + S + SS +F ++ L CSAKKK FVDQI
Sbjct: 1 MAGYLLPY-------HTSLFLSSQNSHRITATSSFLFKIDRPGSLVCCSAKKKAGFVDQI 53
Query: 59 LDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILS 118
LDYIEGGPKLRKWYGAPDLLPKDGS+ E++++ E EE RDAVLVTDGDS+IGQMVILS
Sbjct: 54 LDYIEGGPKLRKWYGAPDLLPKDGSSVEEDDESAEV-EEDRDAVLVTDGDSEIGQMVILS 112
Query: 119 LIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNA 178
LIVKR+RIKALVKDKR AME+FGTYVESMAGDA++K F + ALRGVR+IICP+EG ISN
Sbjct: 113 LIVKRSRIKALVKDKRAAMEAFGTYVESMAGDANDKSFQRKALRGVRTIICPNEGSISNF 172
Query: 179 GSLKGVQHVILLSQRQRWHSSSN 201
GSL GVQH+ILLSQ + +
Sbjct: 173 GSLMGVQHIILLSQLSAYRGTGG 195
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255560651|ref|XP_002521339.1| conserved hypothetical protein [Ricinus communis] gi|223539417|gb|EEF41007.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 157/202 (77%), Gaps = 6/202 (2%)
Query: 1 MAGTAFPSTLVIQTS-HISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQIL 59
MAGT F S L+ Q+ +S+ +Q KS + S + + L CSAKKKI F+DQIL
Sbjct: 1 MAGT-FSSILLWQSCLSLSYQNQSKSLDF---SPIFHTTNNRSLVHCSAKKKIGFMDQIL 56
Query: 60 DYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSL 119
DYIEGGPKLRKWYGAPDLLPKDGS +DE++ E EE RDA+LVTDGDS+IGQMVILSL
Sbjct: 57 DYIEGGPKLRKWYGAPDLLPKDGSTMQDEDEFSE-EEEVRDAILVTDGDSEIGQMVILSL 115
Query: 120 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 179
IVKR ++KALVKDKR+AME+FGTYVESMAGD S+ F+K ALRGVR+IICP EGF+S+ G
Sbjct: 116 IVKRAKVKALVKDKRSAMEAFGTYVESMAGDTSSMLFIKKALRGVRAIICPKEGFLSSVG 175
Query: 180 SLKGVQHVILLSQRQRWHSSSN 201
SLKGV+HVILLSQ + SS
Sbjct: 176 SLKGVKHVILLSQLSVYRGSSG 197
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356561047|ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806043 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/199 (62%), Positives = 152/199 (76%), Gaps = 10/199 (5%)
Query: 8 STLVIQTSHISFTSQKKSFELANPSSLIFNFEKKV----LFRCSAKKKISFVDQILDYIE 63
STL Q S + TSQ+ A SS FN E L C AKKK+SF++QILDYIE
Sbjct: 11 STLPFQKS-VPLTSQRSG--TAFGSSFQFNRENGTVVTPLVVCHAKKKLSFMEQILDYIE 67
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPE-EARDAVLVTDGDSDIGQMVILSLIVK 122
GGPKLRKWYGAPD+L KDG+ ED ED++PE E RDAVLVTDGDS++GQMVILSLIVK
Sbjct: 68 GGPKLRKWYGAPDILEKDGTAIED--NEDDYPEDEVRDAVLVTDGDSEMGQMVILSLIVK 125
Query: 123 RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLK 182
+ R+K LVKDKR A+E+FG+YVESMAGD S+K+F+K ALRGVR+IICP+EGF+S+ GSL+
Sbjct: 126 KARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFVKKALRGVRTIICPNEGFLSSVGSLQ 185
Query: 183 GVQHVILLSQRQRWHSSSN 201
GVQHVI+LS+ + S
Sbjct: 186 GVQHVIVLSRLSVYGGQSG 204
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522384|ref|XP_003529826.1| PREDICTED: uncharacterized protein LOC100801216 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/203 (60%), Positives = 151/203 (74%), Gaps = 14/203 (6%)
Query: 8 STLVIQTSHISFTSQKKSFELANPSSLIFNFEK----KVLFRCSAKKKISFVDQILDYIE 63
STL Q S + SQ+ SS +F+ E L C AKKK+SF++QILDYIE
Sbjct: 11 STLSFQKS-VPLNSQRSGTSFG--SSFLFSRENGSVVPSLVVCHAKKKLSFMEQILDYIE 67
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP-----EEARDAVLVTDGDSDIGQMVILS 118
GGPKLRKWYGAPD+L KDG+ ED+E D++P +E RDAVLVTDGDS+ GQMVILS
Sbjct: 68 GGPKLRKWYGAPDILEKDGTAIEDDE--DDYPGEQIEDEVRDAVLVTDGDSETGQMVILS 125
Query: 119 LIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNA 178
LIVK+ R+K LVKDKR A+E+FG+YVESMAGD S+K+FLK ALRGVR+IICP+EGF+S+
Sbjct: 126 LIVKKARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFLKKALRGVRTIICPNEGFLSSV 185
Query: 179 GSLKGVQHVILLSQRQRWHSSSN 201
GSL+GVQHVI+LSQ + S
Sbjct: 186 GSLQGVQHVIVLSQLSVYGGKSG 208
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79378061|ref|NP_177408.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|44917555|gb|AAS49102.1| At1g72640 [Arabidopsis thaliana] gi|332197230|gb|AEE35351.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 147/205 (71%), Gaps = 8/205 (3%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGSNEED------EEKEDEFPEEARDAVLVTDGDSDIGQM 114
YIEGGPKLRKWYGAP+L PKDGS D EEKED+ E +D V VTDGDSD+GQM
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGE-KDVVFVTDGDSDLGQM 118
Query: 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174
+IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF
Sbjct: 119 IILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGF 178
Query: 175 ISNAGSLKGVQHVILLSQRQRWHSS 199
+S S +GV+H +LLSQ + SS
Sbjct: 179 LSIVKSFRGVKHAVLLSQLSVYESS 203
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297842009|ref|XP_002888886.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] gi|297334727|gb|EFH65145.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 145/207 (70%), Gaps = 13/207 (6%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F S + E + + K+ RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFCSSNQVSE--TKCRIGISSGKRCRVRCLAKKKISFVDQILD 58
Query: 61 YIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF-PEEARD-------AVLVTDGDSDIG 112
YIEGGPKLRKWYGAP+L PKDGS D+ DEF EEA+D V VTDGDSD+G
Sbjct: 59 YIEGGPKLRKWYGAPELRPKDGSLSGDD---DEFEAEEAKDDLDGENDVVFVTDGDSDLG 115
Query: 113 QMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172
QM+IL LIVK TR+KALVKDKR A+E+FG+YVE +GDAS+++FLK A +GV ++I P+E
Sbjct: 116 QMIILQLIVKGTRVKALVKDKRKALEAFGSYVELTSGDASDERFLKKAFKGVGAVISPTE 175
Query: 173 GFISNAGSLKGVQHVILLSQRQRWHSS 199
GF+ N S +GV+H +LLSQ + SS
Sbjct: 176 GFLPNVKSFRGVKHAVLLSQLSVYESS 202
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|51969936|dbj|BAD43660.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 149/203 (73%), Gaps = 5/203 (2%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS----NEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVI 116
YIEGGPKLRKWYGAP+L PKDGS ++E EE++++ + +D V VTDGDSD+GQM+I
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEEEKEDDLDGEKDVVFVTDGDSDLGQMII 119
Query: 117 LSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 176
L LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+S
Sbjct: 120 LQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFLS 179
Query: 177 NAGSLKGVQHVILLSQRQRWHSS 199
S +GV+H +LLSQ + SS
Sbjct: 180 IVKSFRGVKHAVLLSQLSVYESS 202
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79321173|ref|NP_001031269.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332197231|gb|AEE35352.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 149/203 (73%), Gaps = 5/203 (2%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS----NEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVI 116
YIEGGPKLRKWYGAP+L PKDGS ++E EE++++ + +D V VTDGDSD+GQM+I
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEEEKEDDLDGEKDVVFVTDGDSDLGQMII 119
Query: 117 LSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 176
L LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+S
Sbjct: 120 LQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFLS 179
Query: 177 NAGSLKGVQHVILLSQRQRWHSS 199
S +GV+H +LLSQ + SS
Sbjct: 180 IVKSFRGVKHAVLLSQLSVYESS 202
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|37991868|gb|AAR06314.1| expressed protein [Oryza sativa Japonica Group] gi|108708765|gb|ABF96560.1| expressed protein [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 129/167 (77%), Gaps = 3/167 (1%)
Query: 35 IFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF 94
+FN V+ R +K + SF D+ILDYIEGGPKLR+WYGAPDLLPKDGS E+ E++ E
Sbjct: 38 LFNAATAVVVRSRSKDEASFTDRILDYIEGGPKLRRWYGAPDLLPKDGSAEDGEDEPSEI 97
Query: 95 P-EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 153
EE RDAVLVT+GDS+IGQMVILSLI+KR RIKALVKD+R+ E+FGTYVE M G+ +
Sbjct: 98 DIEEPRDAVLVTNGDSEIGQMVILSLILKRARIKALVKDRRSTEEAFGTYVECMVGNMED 157
Query: 154 KKFLKTALRGVRSIICPS-EGFISNAGSLKGVQHVILLSQRQRWHSS 199
K F K ALRGVR+IICP+ +GF S+ LKGVQH++LLSQ + S
Sbjct: 158 KSFTKKALRGVRAIICPADDGFFSDL-DLKGVQHIVLLSQLSVYRGS 203
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 209 | ||||||
| TAIR|locus:2030270 | 312 | AT1G72640 [Arabidopsis thalian | 0.947 | 0.634 | 0.549 | 1.9e-51 |
| TAIR|locus:2030270 AT1G72640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 112/204 (54%), Positives = 140/204 (68%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS-----NXXXXXXXXXXXXXARDAVLVTDGDSDIGQMV 115
YIEGGPKLRKWYGAP+L PKDGS + +D V VTDGDSD+GQM+
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGEKDVVFVTDGDSDLGQMI 119
Query: 116 ILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 175
IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+
Sbjct: 120 ILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFL 179
Query: 176 SNAGSLKGVQHVILLSQRQRWHSS 199
S S +GV+H +LLSQ + SS
Sbjct: 180 SIVKSFRGVKHAVLLSQLSVYESS 203
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 209 196 0.00080 111 3 11 22 0.46 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 589 (63 KB)
Total size of DFA: 149 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.52u 0.08s 16.60t Elapsed: 00:00:04
Total cpu time: 16.52u 0.08s 16.60t Elapsed: 00:00:04
Start: Fri May 10 19:32:22 2013 End: Fri May 10 19:32:26 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
 |
 |
 |
 |
 |
 |
 |
 |
||
 | gw1.III.2689.1 | hypothetical protein (262 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 209 | |||
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 0.003 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 37.1 bits (86), Expect = 0.003
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 103 LVTDGDSDIGQMVILSLIVKRTRIKAL-VKDK---RNAMESFG-----TYVESMAGDASN 153
LVT G +GQ +I L+ ++ +K + V DK +E F TYV + GD +
Sbjct: 3 LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKD 62
Query: 154 KKFLKTALRGVRSII 168
FL A +GV +I
Sbjct: 63 LSFLFRACQGVSVVI 77
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 209 | |||
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.83 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.83 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.82 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.82 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.78 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.78 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.77 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.77 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.74 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.74 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.74 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.73 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.73 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.73 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.72 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.72 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.71 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.71 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.71 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.71 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.7 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.69 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.68 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.68 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.68 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.67 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.66 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.65 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.64 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.64 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.64 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.64 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.63 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.62 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.62 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.61 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.6 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.59 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.59 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.59 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.59 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.57 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.57 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.57 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.55 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.55 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.53 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.53 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.53 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.52 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.52 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.51 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.51 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.49 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.49 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.48 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.48 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.48 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.47 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.46 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.45 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.45 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.45 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.44 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.43 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.42 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.42 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.39 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.39 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.39 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.38 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.38 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.38 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.38 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.38 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.37 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.37 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.36 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.34 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.33 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.32 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.32 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.3 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.3 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.3 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.3 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.29 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.29 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.29 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.29 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.28 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.27 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.27 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.26 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.26 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.26 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.25 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.24 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.24 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.24 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.23 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.23 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.22 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.22 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.22 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.22 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.21 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.21 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.21 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.2 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.2 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.19 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.18 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.18 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.18 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.18 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.17 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.17 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.16 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.16 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.15 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.14 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.14 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.14 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.14 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.13 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.13 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.12 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.12 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.11 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.11 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.11 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.11 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.11 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.1 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.1 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.09 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.09 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.08 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.08 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.07 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.05 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.05 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.05 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.05 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.04 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.04 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.04 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.03 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.99 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.99 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.98 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.98 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.97 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.97 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.96 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.96 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.95 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.95 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.95 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.93 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 98.93 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.92 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.91 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.9 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.9 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.88 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.88 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.86 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.84 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.83 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.82 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.81 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.81 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.81 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.79 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.79 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.78 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.78 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.76 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.75 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.74 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.7 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.69 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 98.69 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 98.68 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.67 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.66 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.65 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.6 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.55 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.52 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.5 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 98.47 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 98.45 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 98.44 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.43 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 98.42 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.42 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.38 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.38 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 98.37 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.34 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.33 | |
| PLN00106 | 323 | malate dehydrogenase | 98.32 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 98.32 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.32 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.31 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.24 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.24 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.23 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.21 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.21 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.2 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.2 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.19 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.16 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.14 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 98.13 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.12 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 98.11 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 98.08 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.07 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.05 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.05 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.03 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.97 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.97 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.94 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.93 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.93 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.91 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 97.88 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.85 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.84 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.79 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.78 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.76 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 97.75 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.74 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.69 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.68 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 97.66 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.65 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.65 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.57 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.54 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.54 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.53 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.46 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.45 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.43 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 97.4 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.4 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 97.38 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 97.38 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.38 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 97.34 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.34 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.3 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 97.28 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.27 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.27 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.26 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.24 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 97.24 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.22 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.19 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 97.14 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.1 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 97.1 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 97.07 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 97.07 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.01 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.01 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.99 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.98 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.96 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 96.96 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 96.93 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.92 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.85 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.85 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.79 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 96.75 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.75 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 96.73 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.69 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.65 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.64 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 96.59 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.59 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.58 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.57 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.56 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.56 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 96.56 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.55 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.54 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 96.52 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.49 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.48 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 96.46 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.44 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 96.43 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.36 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.35 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.34 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.34 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 96.33 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 96.31 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.3 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.28 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 96.25 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.25 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.24 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 96.23 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.21 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 96.21 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 96.2 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 96.18 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 96.16 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.14 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.13 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.12 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.11 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.11 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.1 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 96.1 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.09 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.05 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 96.04 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 96.02 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.01 | |
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 96.01 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.0 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 95.99 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.99 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 95.99 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 95.98 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 95.98 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 95.96 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.95 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 95.94 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 95.93 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 95.92 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 95.9 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 95.9 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 95.87 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.86 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.84 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 95.84 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 95.82 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.82 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 95.73 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 95.72 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 95.71 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 95.7 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.7 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 95.68 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 95.66 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 95.6 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 95.6 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 95.58 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 95.56 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.56 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 95.55 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 95.5 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 95.5 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.45 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 95.43 | |
| PRK05678 | 291 | succinyl-CoA synthetase subunit alpha; Validated | 95.41 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 95.41 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 95.4 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 95.38 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 95.37 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 95.37 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 95.34 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 95.32 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 95.3 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 95.29 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 95.29 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 95.29 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 95.24 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 95.23 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.22 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 95.22 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.22 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.21 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.2 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 95.2 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 95.18 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 95.15 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.14 | |
| PTZ00187 | 317 | succinyl-CoA synthetase alpha subunit; Provisional | 95.1 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 95.1 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.08 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.08 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 95.07 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 95.0 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 94.99 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 94.98 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 94.98 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 94.97 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 94.96 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 94.95 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.95 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 94.94 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 94.94 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 94.92 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 94.92 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 94.92 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 94.92 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 94.91 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 94.9 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 94.89 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 94.88 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 94.85 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 94.82 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 94.81 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 94.79 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 94.76 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 94.76 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 94.76 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 94.75 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 94.74 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 94.74 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 94.73 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 94.71 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 94.71 | |
| PLN02928 | 347 | oxidoreductase family protein | 94.7 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 94.69 |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-20 Score=170.11 Aligned_cols=102 Identities=16% Similarity=0.220 Sum_probs=87.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch------hhh--cCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MES--FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a------~~~--~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
.+++|+|||||||||++||++||.+||.||+.+|+++.. ..+ ......++.+|++|++++.+|++|||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 578999999999999999999999999999999999862 222 124488999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhCC-CCEEEEecccccccCC
Q 028418 170 PS-------------------EGF--ISNAGSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a-------------------~g~--ll~AA~~aG-VkriV~vSS~~Vyg~~ 199 (209)
++ .|+ ++++|++.. ||||||+||.++....
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~ 136 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYN 136 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccC
Confidence 83 133 899999888 9999999998776543
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-20 Score=163.68 Aligned_cols=97 Identities=22% Similarity=0.271 Sum_probs=84.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
|+|||||||||||++|+++|+++||+|++++|++++.......+++++.+|++|++++.++++|+|+|||+.
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 589999999999999999999999999999999866543333579999999999999999999999999981
Q ss_pred -------hh--HHHHHHHhCCCCEEEEecccccc
Q 028418 172 -------EG--FISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 -------~g--~ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.+ .+++||+++||+||||+||.+++
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~ 114 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE 114 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEecccccc
Confidence 12 28899999999999999997553
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=145.48 Aligned_cols=99 Identities=24% Similarity=0.354 Sum_probs=90.3
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC---------h
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---------E 172 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---------~ 172 (209)
|+|+||||++|+.|+++|+++|++|++++|++++... ..+++++.+|+.|++++.++++|+|+||++. .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~ 78 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAA 78 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccccccc
Confidence 7999999999999999999999999999999988765 6789999999999999999999999999982 1
Q ss_pred hHHHHHHHhCCCCEEEEecccccccCCCCc
Q 028418 173 GFISNAGSLKGVQHVILLSQRQRWHSSSNE 202 (209)
Q Consensus 173 g~ll~AA~~aGVkriV~vSS~~Vyg~~~~l 202 (209)
..++++|+++|++|+|++|+.++|+....+
T Consensus 79 ~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~ 108 (183)
T PF13460_consen 79 KNIIEAAKKAGVKRVVYLSSAGVYRDPPGL 108 (183)
T ss_dssp HHHHHHHHHTTSSEEEEEEETTGTTTCTSE
T ss_pred ccccccccccccccceeeeccccCCCCCcc
Confidence 238999999999999999999999976653
|
... |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.6e-20 Score=162.10 Aligned_cols=96 Identities=21% Similarity=0.327 Sum_probs=82.3
Q ss_pred EEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh--hhcCCc-eEEEEccCCCHHHHHHhhcCCcEEEEcC------
Q 028418 103 LVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTY-VESMAGDASNKKFLKTALRGVRSIICPS------ 171 (209)
Q Consensus 103 LVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~--~~~~~~-vevv~GDl~D~~sL~~AL~GvDaVIh~a------ 171 (209)
|||||+||+|+|||++|+++| ++||+++|.+.... .....+ .+++.+|++|++++.+||+|||+|||++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 799999999999999999999 89999998775432 122222 3499999999999999999999999992
Q ss_pred -------------hhH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 -------------EGF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 -------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.|+ ++++|++++|+||||+||.+|++.
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~ 122 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFD 122 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEe
Confidence 233 899999999999999999999886
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.2e-19 Score=150.74 Aligned_cols=96 Identities=13% Similarity=0.117 Sum_probs=83.2
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh------cC-CcEEEEcC--
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL------RG-VRSIICPS-- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL------~G-vDaVIh~a-- 171 (209)
+||||||||+||++++++|+++|++|++++|++++.. ..+++.+.+|++|++++.+|+ +| +|+|||+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 5999999999999999999999999999999997653 246888999999999999999 68 99999872
Q ss_pred -------hhHHHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -------EGFISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -------~g~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
...++++|+++||+||||+||.+++...
T Consensus 78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~ 112 (285)
T TIGR03649 78 IPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGG 112 (285)
T ss_pred CCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCC
Confidence 1138999999999999999998765443
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-18 Score=154.26 Aligned_cols=104 Identities=14% Similarity=0.105 Sum_probs=86.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh----h-------cCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S-------FGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~----~-------~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
-.+++|||||||||||++|+++|+++|++|++++|....... . ....++++.+|+.|++.+.++++++|
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 345799999999999999999999999999999985532110 0 01247889999999999999999999
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|||++ .|+ ++++|++.+++||||+||..||+...
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~ 149 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHP 149 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCC
Confidence 999992 122 78999999999999999999998654
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-18 Score=155.55 Aligned_cols=99 Identities=10% Similarity=0.057 Sum_probs=83.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a 171 (209)
|+|||||||||||++|+++|+++ |++|++++|+.++.... +..+++++.+|++|++.+.++++++|+|||++
T Consensus 15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlA 94 (386)
T PLN02427 15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTINLA 94 (386)
T ss_pred cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEcc
Confidence 58999999999999999999998 59999999876543322 12368999999999999999999999999982
Q ss_pred -h-------------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -E-------------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -~-------------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. ++ ++++|++.+ +||||+||..+||..
T Consensus 95 a~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~ 143 (386)
T PLN02427 95 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKT 143 (386)
T ss_pred cccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCC
Confidence 0 11 678888887 999999999999864
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-18 Score=152.95 Aligned_cols=106 Identities=19% Similarity=0.238 Sum_probs=87.9
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-----hhc--CCceEEEEccCCCHHHHHHhhcCCcE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESF--GTYVESMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-----~~~--~~~vevv~GDl~D~~sL~~AL~GvDa 166 (209)
+....+++|||||||||||++|+++|+++|++|++++|+.+... ... ...++++.+|++|++.+.++++++|+
T Consensus 5 ~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 84 (342)
T PLN02214 5 VASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDG 84 (342)
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCE
Confidence 44556789999999999999999999999999999999875421 111 13588999999999999999999999
Q ss_pred EEEcC---------------hhH--HHHHHHhCCCCEEEEeccc-ccccCC
Q 028418 167 IICPS---------------EGF--ISNAGSLKGVQHVILLSQR-QRWHSS 199 (209)
Q Consensus 167 VIh~a---------------~g~--ll~AA~~aGVkriV~vSS~-~Vyg~~ 199 (209)
|||++ .++ ++++|++++++||||+||. ++|+..
T Consensus 85 Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~ 135 (342)
T PLN02214 85 VFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDP 135 (342)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccC
Confidence 99992 122 7899999999999999996 588753
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=144.25 Aligned_cols=98 Identities=14% Similarity=0.220 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hh--c---CCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--F---GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~--~---~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
..++|||||||||||++++++|+++|++|++++|+..... .. . ..+++++.+|++|++.+.++++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 3578999999999999999999999999999999875421 11 1 23689999999999999999999999999
Q ss_pred cC----------h---------hH--HHHHHHhC-CCCEEEEeccccc
Q 028418 170 PS----------E---------GF--ISNAGSLK-GVQHVILLSQRQR 195 (209)
Q Consensus 170 ~a----------~---------g~--ll~AA~~a-GVkriV~vSS~~V 195 (209)
++ . ++ ++++|++. +++||||+||.++
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~ 130 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAA 130 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHH
Confidence 82 0 11 67888877 9999999999874
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.5e-17 Score=139.31 Aligned_cols=105 Identities=22% Similarity=0.308 Sum_probs=88.0
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCC-HHHHHHhh-cCCcEEEEc
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASN-KKFLKTAL-RGVRSIICP 170 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D-~~sL~~AL-~GvDaVIh~ 170 (209)
++..+++||||||||+||++++++|+++||+|++++|++++..... ..+++++.+|++| ...+.+++ .++|+||++
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICA 92 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEEC
Confidence 4555789999999999999999999999999999999987654332 2358999999998 57888888 799999988
Q ss_pred C---h-------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 171 S---E-------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a---~-------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. . ++ +++++++.+++||||+||.++|+..
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~ 139 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAA 139 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCC
Confidence 1 0 22 7889999999999999999998753
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-17 Score=146.45 Aligned_cols=101 Identities=14% Similarity=0.194 Sum_probs=83.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcC-CceEEEEccCC-CHHHHHHhhcCCcEEEEcC----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDAS-NKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~-~~vevv~GDl~-D~~sL~~AL~GvDaVIh~a---- 171 (209)
+|+|||||||||||++|+++|+++ |++|++++|+..+.....+ .+++++.+|++ |++.+.++++++|+|||++
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~ 80 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT 80 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence 468999999999999999999986 6999999987654433322 46899999997 7888999999999999982
Q ss_pred ----------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.+ +||||+||..+|+...
T Consensus 81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~ 126 (347)
T PRK11908 81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCP 126 (347)
T ss_pred hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCC
Confidence 012 689999888 8999999999998643
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-17 Score=148.65 Aligned_cols=109 Identities=16% Similarity=0.079 Sum_probs=88.3
Q ss_pred cCCccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 90 KEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 90 ~~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
.+++|.. .+|+|||||||||||+++++.|+++||+|++++|............++++.+|++|.+.+.++++++|+|||
T Consensus 13 ~~~~~~~-~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 91 (370)
T PLN02695 13 REPYWPS-EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFN 91 (370)
T ss_pred CCCCCCC-CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEE
Confidence 3445554 446899999999999999999999999999999865332111112368899999999999999999999999
Q ss_pred cC-h--------------------h--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 170 PS-E--------------------G--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a-~--------------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ . + .++++|++.++++|||+||..+|+..
T Consensus 92 ~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~ 144 (370)
T PLN02695 92 LAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEF 144 (370)
T ss_pred cccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCc
Confidence 92 0 1 17899999999999999999999864
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-17 Score=146.42 Aligned_cols=101 Identities=20% Similarity=0.308 Sum_probs=83.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hc-----CCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~-----~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
..++|||||||||||++++++|+++|++|++++|++..... .. ...++++.+|++|++.+.++++++|+|||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 35689999999999999999999999999999998754321 11 12478999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhCC-CCEEEEecccccccC
Q 028418 170 PS-------------------EGF--ISNAGSLKG-VQHVILLSQRQRWHS 198 (209)
Q Consensus 170 ~a-------------------~g~--ll~AA~~aG-VkriV~vSS~~Vyg~ 198 (209)
++ .++ ++++|.+.+ ++||||+||.++|+.
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~ 134 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNV 134 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhccc
Confidence 82 022 788898877 899999999977654
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.3e-17 Score=143.38 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=82.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhc-----CCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~-----~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
..++|||||||||||++++++|+++|++|++++|+..+.. ... ...++++.+|++|++.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4579999999999999999999999999999999876432 111 23589999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhC-CCCEEEEecccccc
Q 028418 170 PS-------------------EGF--ISNAGSLK-GVQHVILLSQRQRW 196 (209)
Q Consensus 170 ~a-------------------~g~--ll~AA~~a-GVkriV~vSS~~Vy 196 (209)
++ .++ ++++|++. +++||||+||.+++
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~ 132 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAV 132 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhhe
Confidence 92 011 67888875 89999999998764
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.72 E-value=4e-17 Score=144.54 Aligned_cols=101 Identities=14% Similarity=0.145 Sum_probs=83.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hhhhc-------CCceEEEEccCCCHHHHHHhhcC--Cc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-------GTYVESMAGDASNKKFLKTALRG--VR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~~~~-------~~~vevv~GDl~D~~sL~~AL~G--vD 165 (209)
++|||||||||||++|+++|+++|++|++++|++.. ..... +.+++++.+|++|++.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 489999999999999999999999999999997642 11111 23589999999999999999985 59
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCC---EEEEecccccccCCC
Q 028418 166 SIICPS--------------------EGF--ISNAGSLKGVQ---HVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a--------------------~g~--ll~AA~~aGVk---riV~vSS~~Vyg~~~ 200 (209)
+|||++ .|+ ++++|++.+++ ||||+||..+||...
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~ 140 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQ 140 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCC
Confidence 999992 022 78899988875 899999999998653
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.5e-17 Score=139.98 Aligned_cols=99 Identities=25% Similarity=0.327 Sum_probs=86.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
++||||||+||||+++++.|+++|++|+++.|++++.......+++++.+|++|++.+.++++++|+|||++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~ 80 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP 80 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence 479999999999999999999999999999998776543333468999999999999999999999999982
Q ss_pred ----------hhH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 ----------EGF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 ----------~g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.++ ++++|++.+++||||+||..+|+.
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~ 119 (328)
T TIGR03466 81 DPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGV 119 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCc
Confidence 011 688899999999999999999985
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.8e-17 Score=147.25 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=86.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCc-eEEEEccCCCHHHHHHhhc--CCcEEEEcC-----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTALR--GVRSIICPS----- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~-vevv~GDl~D~~sL~~AL~--GvDaVIh~a----- 171 (209)
|+|||||++|+||+|.|.+|+++|++|++++.-...-.+..... +++++||+.|.+.|.+.|+ .+|+|||.+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence 58999999999999999999999999999995332222222222 6899999999999999996 689999982
Q ss_pred ---------------hhH--HHHHHHhCCCCEEEEecccccccCCCCc
Q 028418 172 ---------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSNE 202 (209)
Q Consensus 172 ---------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~l 202 (209)
.|+ |+++|+++||++|||.||..|||.+...
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~ 128 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTS 128 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCc
Confidence 133 8999999999999999999999998764
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.9e-17 Score=142.49 Aligned_cols=102 Identities=18% Similarity=0.274 Sum_probs=84.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-----hcC--CceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFG--TYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-----~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
..+++|||||||||||++|+++|+++|++|++++|+...... .+. .+++++.+|++|++.+.++++++|+|||
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 346789999999999999999999999999999998754211 111 2588999999999999999999999999
Q ss_pred cC-------h------------hH--HHHHHHhC-CCCEEEEecccccccC
Q 028418 170 PS-------E------------GF--ISNAGSLK-GVQHVILLSQRQRWHS 198 (209)
Q Consensus 170 ~a-------~------------g~--ll~AA~~a-GVkriV~vSS~~Vyg~ 198 (209)
++ . ++ ++++|.+. +++||||+||.++|+.
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~ 137 (338)
T PLN00198 87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSI 137 (338)
T ss_pred eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeec
Confidence 92 0 11 67887775 6999999999999974
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.1e-17 Score=136.40 Aligned_cols=96 Identities=23% Similarity=0.330 Sum_probs=79.2
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch--hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---h---
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---E--- 172 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a--~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a---~--- 172 (209)
|||+||||.+|++|++.|+..+++|++++|++.+. ..+...+++++.+|+.|+++|.+||+|+|+||++ . .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~ 80 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSEL 80 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhh
Confidence 79999999999999999999999999999998542 2333356899999999999999999999999988 2 1
Q ss_pred ---hHHHHHHHhCCCCEEEEeccccccc
Q 028418 173 ---GFISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 173 ---g~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
-.+++||+++||+|||+.|....+.
T Consensus 81 ~~~~~li~Aa~~agVk~~v~ss~~~~~~ 108 (233)
T PF05368_consen 81 EQQKNLIDAAKAAGVKHFVPSSFGADYD 108 (233)
T ss_dssp HHHHHHHHHHHHHT-SEEEESEESSGTT
T ss_pred hhhhhHHHhhhccccceEEEEEeccccc
Confidence 1289999999999999877666663
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=8.6e-17 Score=137.65 Aligned_cols=98 Identities=18% Similarity=0.241 Sum_probs=85.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCC-cEEEEcC--------
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV-RSIICPS-------- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~Gv-DaVIh~a-------- 171 (209)
+|||||||||||++|+++|+++||+|+++.|...+..... ..++++.+|++|.+.+.+++.++ |+|||++
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~ 80 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDS 80 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhhh
Confidence 4999999999999999999999999999999887654433 56899999999999999999999 9999992
Q ss_pred -h-----h-------H--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -E-----G-------F--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -~-----g-------~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. . + ++++|++.+++||||.||.++++..
T Consensus 81 ~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~ 123 (314)
T COG0451 81 NASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGD 123 (314)
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCC
Confidence 1 0 1 7889999999999998888877765
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-16 Score=141.63 Aligned_cols=104 Identities=16% Similarity=0.255 Sum_probs=85.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-----CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-----~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+...++|||||||||||++++++|+++|++|++++|++.+..... ...++++.+|++|++.+.++++++|+|||+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 334568999999999999999999999999999999876543211 245889999999999999999999999999
Q ss_pred C------h---------------------hH--HHHHHHhCC-CCEEEEecccccccCC
Q 028418 171 S------E---------------------GF--ISNAGSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a------~---------------------g~--ll~AA~~aG-VkriV~vSS~~Vyg~~ 199 (209)
+ . ++ ++++|++++ +++|||+||.++|+..
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~ 145 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAK 145 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhcccc
Confidence 2 0 11 567887764 9999999999999853
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-16 Score=154.38 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=85.6
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHH-HHHhhcCCcEEEEcC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKF-LKTALRGVRSIICPS 171 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~s-L~~AL~GvDaVIh~a 171 (209)
...++++|||||||||||+||+++|+++ ||+|++++|++........ .+++++.+|++|+.. +.++++++|+|||++
T Consensus 311 ~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 311 SAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLV 390 (660)
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence 4567889999999999999999999986 7999999997754332222 368999999999765 678899999999982
Q ss_pred --------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 --------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 --------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++++ +||||+||..+||..
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~ 439 (660)
T PRK08125 391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMC 439 (660)
T ss_pred cccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCC
Confidence 012 789999998 899999999999854
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.4e-16 Score=137.00 Aligned_cols=100 Identities=15% Similarity=0.197 Sum_probs=81.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch------hhh--cCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MES--FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a------~~~--~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
++++|||||||||||++|+++|+++||+|++++|+..+. ... .+.+++++.+|++|++.+.+++.++|+|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 357899999999999999999999999999999964321 111 123588999999999999999999999998
Q ss_pred cC------------------hhH--HHHHHHhC-CCCEEEEeccccccc
Q 028418 170 PS------------------EGF--ISNAGSLK-GVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a------------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg 197 (209)
+. .++ ++++|.+. +++|||++||.+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~ 133 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVI 133 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHhee
Confidence 61 122 78888775 799999999987653
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.5e-16 Score=145.88 Aligned_cols=104 Identities=19% Similarity=0.215 Sum_probs=83.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-----------------h------hhcCCceEEEEccCC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----------------M------ESFGTYVESMAGDAS 152 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-----------------~------~~~~~~vevv~GDl~ 152 (209)
...+++|||||||||||+||+++|+++|++|++++|..... . .....+++++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 34467899999999999999999999999999987422110 0 001235899999999
Q ss_pred CHHHHHHhhc--CCcEEEEcC-----------------------hhH--HHHHHHhCCCC-EEEEecccccccCC
Q 028418 153 NKKFLKTALR--GVRSIICPS-----------------------EGF--ISNAGSLKGVQ-HVILLSQRQRWHSS 199 (209)
Q Consensus 153 D~~sL~~AL~--GvDaVIh~a-----------------------~g~--ll~AA~~aGVk-riV~vSS~~Vyg~~ 199 (209)
|++.+.++++ ++|+|||++ .|+ ++++|++.|++ ||||+||..+||..
T Consensus 124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~ 198 (442)
T PLN02572 124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTP 198 (442)
T ss_pred CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCC
Confidence 9999999998 489999983 011 68899999996 99999999999864
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.2e-16 Score=143.02 Aligned_cols=104 Identities=15% Similarity=0.222 Sum_probs=84.6
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--c---------CCceEEEEccCCCHHHHHHhhcC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--F---------GTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--~---------~~~vevv~GDl~D~~sL~~AL~G 163 (209)
....+++|||||||||||++++++|+++|++|++++|+.+..... . ...++++.+|++|++.+.+++++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 345577999999999999999999999999999999986543211 0 12478999999999999999999
Q ss_pred CcEEEEcC-----h---------------hH--HHHHHHhC-CCCEEEEeccc--ccccC
Q 028418 164 VRSIICPS-----E---------------GF--ISNAGSLK-GVQHVILLSQR--QRWHS 198 (209)
Q Consensus 164 vDaVIh~a-----~---------------g~--ll~AA~~a-GVkriV~vSS~--~Vyg~ 198 (209)
+|+|||++ . ++ ++++|++. +|+||||+||. .+|+.
T Consensus 129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~ 188 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQ 188 (367)
T ss_pred ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccc
Confidence 99999982 0 11 78999876 89999999996 46653
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.3e-16 Score=142.26 Aligned_cols=103 Identities=22% Similarity=0.264 Sum_probs=85.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh--------hhcCCceEEEEccCCCHHHHHHhhc----C
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--------ESFGTYVESMAGDASNKKFLKTALR----G 163 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~--------~~~~~~vevv~GDl~D~~sL~~AL~----G 163 (209)
...+++|||||||||||++++++|+++|++|++++|++.+.. .....+++++.+|++|++++.++++ +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 344568999999999999999999999999999999875431 0112468999999999999999998 5
Q ss_pred CcEEEEc-C--------------hh--HHHHHHHhCCCCEEEEecccccccC
Q 028418 164 VRSIICP-S--------------EG--FISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~-a--------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+|+|||+ + .+ .++++|++.|++||||+||..+++.
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p 188 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP 188 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc
Confidence 9999997 1 01 2789999999999999999988754
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.9e-16 Score=128.47 Aligned_cols=98 Identities=22% Similarity=0.287 Sum_probs=84.9
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCC--cEEEEc-Ch-----
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGV--RSIICP-SE----- 172 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~Gv--DaVIh~-a~----- 172 (209)
|||||||||||++++++|+++|+.|+++.|+....... ...+++++.+|+.|++.+.+++++. |+|||+ +.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE 80 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence 79999999999999999999999999999988665321 1126899999999999999999977 999998 20
Q ss_pred --------------h--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 173 --------------G--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 --------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ .++++|++.+++|+||+||..+|+..
T Consensus 81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~ 123 (236)
T PF01370_consen 81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDP 123 (236)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc
Confidence 0 17889999999999999999999988
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-15 Score=133.11 Aligned_cols=100 Identities=18% Similarity=0.247 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hc-----CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~-----~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++||||||+||||++++++|+++|++|++++|++..... .. ..+++++.+|++|++.+.++++++|+|||+
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~ 84 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT 84 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence 5799999999999999999999999999999998764321 11 135889999999999999999999999998
Q ss_pred C--------------------hhH--HHHHHHhC-CCCEEEEecccccccC
Q 028418 171 S--------------------EGF--ISNAGSLK-GVQHVILLSQRQRWHS 198 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg~ 198 (209)
+ .++ ++++|.+. ++++||++||.++|+.
T Consensus 85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~ 135 (325)
T PLN02989 85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLA 135 (325)
T ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheec
Confidence 2 011 67777764 6899999999887754
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-15 Score=132.60 Aligned_cols=100 Identities=21% Similarity=0.229 Sum_probs=81.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
|+|||||||||||++|+++|+++|++|+++.|...... ...+..++++.+|++|++.+.++++ ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 57999999999999999999999999999986433211 1112346789999999999999987 68999998
Q ss_pred C----h----------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 171 S----E----------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a----~----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ . ++ ++++|++.++++|||+||.++|+..
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~ 131 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQ 131 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCC
Confidence 2 0 11 6888999999999999999999754
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5e-16 Score=140.35 Aligned_cols=102 Identities=16% Similarity=0.219 Sum_probs=81.8
Q ss_pred CCCeEEEE----cCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-----------hcCCceEEEEccCCCHHHHHHhhc
Q 028418 98 ARDAVLVT----DGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----------SFGTYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 98 ~~~~ILVT----GATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-----------~~~~~vevv~GDl~D~~sL~~AL~ 162 (209)
.+++|||| |||||||++|+++|+++||+|++++|++..... ....+++++.+|+.|.+.+. +..
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~~ 129 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AGA 129 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-ccC
Confidence 34689999 999999999999999999999999998764221 11235899999998843332 336
Q ss_pred CCcEEEEcC----hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 163 GVRSIICPS----EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a----~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++|+|||+. .+ .++++|+++||+||||+||.++|+...
T Consensus 130 ~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~ 173 (378)
T PLN00016 130 GFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSD 173 (378)
T ss_pred CccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCC
Confidence 899999982 22 389999999999999999999998653
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-15 Score=134.23 Aligned_cols=88 Identities=18% Similarity=0.192 Sum_probs=74.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a------ 171 (209)
|+||||||+||||++|+++|+++| +|++++|... .+.+|++|++.+.++++ ++|+|||++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence 589999999999999999999999 7999987532 35689999999999998 589999992
Q ss_pred --------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.|+ ++||+||..||+...
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~ 112 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTG 112 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCC
Confidence 012 7899999996 799999999997653
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-15 Score=133.74 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hhhh------cCCceEEEEccCCCHHHHHHhhcC--C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES------FGTYVESMAGDASNKKFLKTALRG--V 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~~~------~~~~vevv~GDl~D~~sL~~AL~G--v 164 (209)
.+++|||||||||||++++++|+++|++|+++.|++.. .... .+.+++++.+|++|.+.+.++++. +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 35789999999999999999999999999999987542 1111 123588999999999999999985 5
Q ss_pred cEEEEcC--------------------hhH--HHHHHHhCCCC-----EEEEecccccccCCC
Q 028418 165 RSIICPS--------------------EGF--ISNAGSLKGVQ-----HVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a--------------------~g~--ll~AA~~aGVk-----riV~vSS~~Vyg~~~ 200 (209)
|+|||++ .++ ++++|++.+++ +|||+||.++||...
T Consensus 85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~ 147 (340)
T PLN02653 85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTP 147 (340)
T ss_pred CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCC
Confidence 9999992 012 68889888886 899999999998753
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.2e-15 Score=132.25 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=78.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch---h---hh-cCCceEEEEccCCCHHHHHHhhcC--CcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---M---ES-FGTYVESMAGDASNKKFLKTALRG--VRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a---~---~~-~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh 169 (209)
+++|||||||||||++++++|+++|++|+++.++..+. . .. ....++++.+|++|++.+.+++++ +|.|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 46899999999999999999999999877665533211 1 11 113578899999999999999984 899999
Q ss_pred cC--------------------hhH--HHHHHHh---------CCCCEEEEecccccccCC
Q 028418 170 PS--------------------EGF--ISNAGSL---------KGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a--------------------~g~--ll~AA~~---------aGVkriV~vSS~~Vyg~~ 199 (209)
++ .++ ++++|++ .++++|||+||.++|+..
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~ 141 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDL 141 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCC
Confidence 92 011 6788865 478999999999999853
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.4e-15 Score=132.72 Aligned_cols=101 Identities=18% Similarity=0.188 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a 171 (209)
+++|||||||||||++++++|+++|++|++++|++...... ....++++.+|++|++.+.+++++ +|.|||++
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A 83 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA 83 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence 47899999999999999999999999999999977543211 123577899999999999999985 59999982
Q ss_pred --------------------hhH--HHHHHHhCC-CCEEEEecccccccCC
Q 028418 172 --------------------EGF--ISNAGSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 --------------------~g~--ll~AA~~aG-VkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++.+ +++|||+||..+|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~ 134 (349)
T TIGR02622 84 AQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRND 134 (349)
T ss_pred cccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCC
Confidence 011 688888877 8999999999999753
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.8e-15 Score=130.49 Aligned_cols=101 Identities=17% Similarity=0.246 Sum_probs=82.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-------hhh---cCCceEEEEccCCCHHHHHHhhc--CCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MES---FGTYVESMAGDASNKKFLKTALR--GVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-------~~~---~~~~vevv~GDl~D~~sL~~AL~--GvDa 166 (209)
+++|||||||||||++|+++|+++|++|++++|..... ... ...+++++.+|++|++.+.++++ ++|.
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~ 84 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDA 84 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCE
Confidence 57899999999999999999999999999998754221 111 12458899999999999999986 6899
Q ss_pred EEEcC-h-------------------h--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 167 IICPS-E-------------------G--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 167 VIh~a-~-------------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|||++ . + .++++|++.++++|||+||.++|+..
T Consensus 85 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~ 139 (352)
T PLN02240 85 VIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQP 139 (352)
T ss_pred EEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCC
Confidence 99982 0 1 17788999999999999999999754
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.1e-15 Score=125.05 Aligned_cols=99 Identities=24% Similarity=0.298 Sum_probs=85.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C--h----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--E---- 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a--~---- 172 (209)
++||||||||++|++++++|+++|++|++++|+++++.... .+++++.+|+.++.++..+++|++.++++ . .
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~ 79 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDA 79 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccc
Confidence 58999999999999999999999999999999999887666 78999999999999999999999999887 2 1
Q ss_pred --h----HHHHHHHhC--CCCEEEEecccccccCC
Q 028418 173 --G----FISNAGSLK--GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 --g----~ll~AA~~a--GVkriV~vSS~~Vyg~~ 199 (209)
. .++++++++ ++++++++|...+...+
T Consensus 80 ~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~ 114 (275)
T COG0702 80 FRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAAS 114 (275)
T ss_pred hhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCC
Confidence 1 156666665 49999999999876533
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.9e-15 Score=138.58 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-----hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-----~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
..++|||||||||||++|+++|+++|++|++++|....... ....+++++.+|+.++ ++.++|+|||++
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa 192 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLAC 192 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEeee
Confidence 34789999999999999999999999999999875322111 1124588999999776 356899999982
Q ss_pred -------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++.|+ ||||+||..||+..
T Consensus 193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~ 240 (442)
T PLN02206 193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP 240 (442)
T ss_pred ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCC
Confidence 012 7899999996 89999999999864
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.9e-15 Score=140.63 Aligned_cols=99 Identities=14% Similarity=0.191 Sum_probs=80.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHH--HCCCcEEEEEeCCcchh--hh---cC-CceEEEEccCCCH------HHHHHhhcCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAM--ES---FG-TYVESMAGDASNK------KFLKTALRGVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll--~~G~~VraLvR~~~~a~--~~---~~-~~vevv~GDl~D~------~sL~~AL~GvD 165 (209)
|+|||||||||||++|+++|+ .+|++|++++|+..... .. ++ .+++++.+|++|+ +.+.++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 589999999999999999999 58999999999764321 11 11 4689999999995 455555 9999
Q ss_pred EEEEcC-----------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 166 SIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 166 aVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|||++ .++ ++++|++.++++|||+||..+|+..
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~ 132 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDY 132 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCc
Confidence 999992 122 7899999999999999999998754
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-14 Score=129.42 Aligned_cols=98 Identities=27% Similarity=0.433 Sum_probs=81.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhh---hc-CCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---SF-GTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~---~~-~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
.++|||||||||||++++++|+++| ++|++++|+..+... .. ...++++.+|++|++.+.++++++|+|||++
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag 83 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAA 83 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECcc
Confidence 5789999999999999999999986 789999987654321 11 2358899999999999999999999999982
Q ss_pred -------------------hhH--HHHHHHhCCCCEEEEecccccc
Q 028418 172 -------------------EGF--ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 -------------------~g~--ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.++ ++++|++.+++||||+||....
T Consensus 84 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~ 129 (324)
T TIGR03589 84 LKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA 129 (324)
T ss_pred cCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 022 7889999999999999996543
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.4e-15 Score=138.12 Aligned_cols=97 Identities=18% Similarity=0.176 Sum_probs=76.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh----hhc-CCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~----~~~-~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
+.++|||||||||||++|+++|+++|++|++++|...... ... ...++++.+|+.++ ++.++|+|||++
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa 193 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLAC 193 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECce
Confidence 3468999999999999999999999999999998542211 111 23578999999775 467899999992
Q ss_pred -------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 -------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.++ ||||+||..||+...
T Consensus 194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~ 242 (436)
T PLN02166 194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL 242 (436)
T ss_pred eccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCC
Confidence 012 7899999986 899999999998653
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.1e-15 Score=141.44 Aligned_cols=102 Identities=20% Similarity=0.254 Sum_probs=82.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeCC--cchhhh----cCCceEEEEccCCCHHHHHHhh--cCCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK--RNAMES----FGTYVESMAGDASNKKFLKTAL--RGVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~~--~~a~~~----~~~~vevv~GDl~D~~sL~~AL--~GvDaVI 168 (209)
.++|||||||||||++|+++|+++ +++|++++|.. ...... ...+++++.+|++|++.+..++ .++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 468999999999999999999998 68899988743 111111 1246899999999999988776 6899999
Q ss_pred EcC--------------------hhH--HHHHHHhCC-CCEEEEecccccccCCC
Q 028418 169 CPS--------------------EGF--ISNAGSLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 169 h~a--------------------~g~--ll~AA~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
|++ .++ ++++|++.+ ++||||+||..+|+...
T Consensus 86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~ 140 (668)
T PLN02260 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETD 140 (668)
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCc
Confidence 992 011 788999887 99999999999998654
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.4e-14 Score=140.43 Aligned_cols=98 Identities=19% Similarity=0.265 Sum_probs=83.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc---------------CCceEEEEccCCCHHHHHHhhcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------------GTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~---------------~~~vevv~GDl~D~~sL~~AL~G 163 (209)
.++||||||+|+||++++++|+++|++|++++|+.++..... ..+++++.+|++|.+.+.+++.+
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLgg 159 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGN 159 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcC
Confidence 468999999999999999999999999999999987653211 12478999999999999999999
Q ss_pred CcEEEEcC--h----------------hH--HHHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS--E----------------GF--ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a--~----------------g~--ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|+|||++ . ++ ++++|++.|++|||++||.+++
T Consensus 160 iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~ 212 (576)
T PLN03209 160 ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTN 212 (576)
T ss_pred CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhc
Confidence 99999982 0 12 7888999999999999998774
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.5e-14 Score=125.43 Aligned_cols=99 Identities=17% Similarity=0.235 Sum_probs=80.0
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh------hh----------cC-CceEEEEccCCCH------H
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM------ES----------FG-TYVESMAGDASNK------K 155 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~------~~----------~~-~~vevv~GDl~D~------~ 155 (209)
+|||||||||||++|+++|+++| ++|++++|++.... .. .. .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999999 67999999876321 00 00 4689999999864 5
Q ss_pred HHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 156 FLKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 156 sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+..+.+++|+|||++ .++ ++++|.+.++++|||+||.++++..
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~ 143 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAI 143 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCc
Confidence 6777889999999982 112 7888999999999999999998763
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-14 Score=122.64 Aligned_cols=100 Identities=14% Similarity=0.139 Sum_probs=78.6
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCc--c---hhhh-cCCceEEEEccCCCHHHHHHhhcC--CcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--N---AMES-FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~--~---a~~~-~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~ 170 (209)
+|||||||||||++++++|+++| ++|+++.|... . .... ...+++++.+|++|++++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 78988876321 1 1111 123688999999999999999998 8999999
Q ss_pred C----h----------------hH--HHHHHHhCCCC-EEEEecccccccCCC
Q 028418 171 S----E----------------GF--ISNAGSLKGVQ-HVILLSQRQRWHSSS 200 (209)
Q Consensus 171 a----~----------------g~--ll~AA~~aGVk-riV~vSS~~Vyg~~~ 200 (209)
+ . ++ ++++|++.+++ ++||+||..+|+...
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~ 133 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLE 133 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCC
Confidence 2 0 11 67888887554 899999999998653
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.4e-14 Score=132.19 Aligned_cols=103 Identities=22% Similarity=0.288 Sum_probs=86.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcch--h-hh---cCCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--M-ES---FGTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a--~-~~---~~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
..+.++|||||+||+|+|||++|++++ .+||+++..+... . .. ....++++.+|+.|...+..|++|+ .|+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv 80 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV 80 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence 356799999999999999999999988 8999999776421 1 11 1467899999999999999999999 777
Q ss_pred Ec-C-------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 169 CP-S-------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 169 h~-a-------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|+ + .|+ ++++|++.||+++||+||..|..+..
T Consensus 81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~ 134 (361)
T KOG1430|consen 81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGE 134 (361)
T ss_pred EeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCe
Confidence 76 2 233 89999999999999999999876554
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-14 Score=126.34 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=70.2
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH---HH-HHHhhc-----CCcEEEEcC
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KF-LKTALR-----GVRSIICPS 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~s-L~~AL~-----GvDaVIh~a 171 (209)
+|||||||||||+||+++|+++|++|++++|+....... ..++.+|+.|. +. +.++++ ++|+|||++
T Consensus 1 ~ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A 76 (308)
T PRK11150 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG 76 (308)
T ss_pred CEEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence 699999999999999999999999999988876542211 12334555554 33 344443 699999982
Q ss_pred ------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 ------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 ------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++.++ +|||+||..+|+..
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~ 123 (308)
T PRK11150 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGR 123 (308)
T ss_pred eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcC
Confidence 011 7899999998 69999999999875
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5e-14 Score=124.49 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=75.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEE-EEeCCc--ch---hhhc-CCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKR--NA---MESF-GTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~Vra-LvR~~~--~a---~~~~-~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
|+|||||||||||++|+++|+++|++++. +.|... .. .... ...++++.+|++|++++.++++ ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 47999999999999999999999987444 443221 11 1111 2347889999999999999997 48999999
Q ss_pred C--------------------hhH--HHHHHHhC---------CCCEEEEecccccccC
Q 028418 171 S--------------------EGF--ISNAGSLK---------GVQHVILLSQRQRWHS 198 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~a---------GVkriV~vSS~~Vyg~ 198 (209)
+ .++ ++++|++. ++++|||+||..+|+.
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~ 139 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGD 139 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCC
Confidence 2 022 67888763 6789999999999985
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.6e-14 Score=129.52 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=86.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe---CC-c---chhhhcC--CceEEEEccCCCHHHHHHhhc--CCcEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---DK-R---NAMESFG--TYVESMAGDASNKKFLKTALR--GVRSII 168 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR---~~-~---~a~~~~~--~~vevv~GDl~D~~sL~~AL~--GvDaVI 168 (209)
.+||||||+||||+|.+.+|+++|+.|.+++- .- . +.....+ ..++++++|+.|.++|++.++ ..|+|+
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~ 82 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM 82 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence 58999999999999999999999999999982 11 1 2223344 679999999999999999997 569999
Q ss_pred EcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCCCc
Q 028418 169 CPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSNE 202 (209)
Q Consensus 169 h~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~l 202 (209)
|.+ .|+ ++++|++++++++||.||..|||.+..+
T Consensus 83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~i 138 (343)
T KOG1371|consen 83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKV 138 (343)
T ss_pred eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCccee
Confidence 982 123 8999999999999999999999988653
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.7e-14 Score=120.66 Aligned_cols=83 Identities=16% Similarity=0.307 Sum_probs=72.4
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCC--cEEEEcC----h--
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS----E-- 172 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~Gv--DaVIh~a----~-- 172 (209)
+|||||||||||++++++|+++||+|++++|+ .+|+.|++.+.++++++ |+|||++ .
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence 58999999999999999999999999999985 47999999999999987 9999982 0
Q ss_pred --------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 173 --------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 --------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ ++++|++.++ ||||+||..+|+..
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~ 107 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGE 107 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCC
Confidence 11 6778888886 89999999999763
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.8e-14 Score=132.48 Aligned_cols=104 Identities=14% Similarity=0.216 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcch--h-----h-----hc---------------CCceEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNA--M-----E-----SF---------------GTYVES 146 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a--~-----~-----~~---------------~~~vev 146 (209)
-..++|||||||||+|++|+++|+..+. +|.+|+|+.... . . .+ ..++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 3467899999999999999999998653 579999976421 1 0 01 146899
Q ss_pred EEccCC-------CHHHHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhC-CCCEEEEecccccccCC
Q 028418 147 MAGDAS-------NKKFLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 147 v~GDl~-------D~~sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg~~ 199 (209)
+.||++ |.+.+.++++++|+|||++ .|+ ++++|++. ++++|||+||..|||..
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~ 168 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEK 168 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCC
Confidence 999998 5566788899999999992 122 78899885 89999999999999875
Q ss_pred C
Q 028418 200 S 200 (209)
Q Consensus 200 ~ 200 (209)
.
T Consensus 169 ~ 169 (491)
T PLN02996 169 S 169 (491)
T ss_pred C
Confidence 4
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-13 Score=118.48 Aligned_cols=100 Identities=22% Similarity=0.302 Sum_probs=79.6
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-----CceEEEEccCCCHHHHHHhhc--CCcEEEEcC--
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-----~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (209)
+||||||||+||++++++|+++|++|+++.|.......... ..++++.+|++|++.+.++++ ++|.|||++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 58999999999999999999999999988654322111111 147789999999999999997 689999982
Q ss_pred ----h--------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ----E--------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ----~--------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
. ++ ++++|.+.++++||++||..+|+...
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~ 129 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPS 129 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCC
Confidence 0 11 67888899999999999999987543
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1e-13 Score=137.04 Aligned_cols=89 Identities=21% Similarity=0.366 Sum_probs=76.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
|+|||||||||||++|+++|+++||+|++++|.+... ...+++++.+|++|+. +.+++.++|+|||++
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~ 76 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPG 76 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchh
Confidence 4899999999999999999999999999999876432 2346899999999995 889999999999992
Q ss_pred ----hhH--HHHHHHhCCCCEEEEeccc
Q 028418 172 ----EGF--ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ----~g~--ll~AA~~aGVkriV~vSS~ 193 (209)
.++ ++++|+++|+ ||||+||.
T Consensus 77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~ 103 (699)
T PRK12320 77 GVGITGLAHVANAAARAGA-RLLFVSQA 103 (699)
T ss_pred hHHHHHHHHHHHHHHHcCC-eEEEEECC
Confidence 122 7899999998 79999986
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.4e-14 Score=120.80 Aligned_cols=83 Identities=12% Similarity=0.099 Sum_probs=70.8
Q ss_pred EEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC-h-------
Q 028418 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-E------- 172 (209)
Q Consensus 103 LVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a-~------- 172 (209)
||||||||||++|+++|+++|++|+++.+. ..+|++|++.+.++++ ++|+|||++ .
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 699999999999999999999998866432 2489999999999987 469999992 0
Q ss_pred -------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 173 -------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 -------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ ++++|++.+++|+||+||..||+..
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~ 108 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKF 108 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCC
Confidence 11 7899999999999999999999854
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.1e-13 Score=113.35 Aligned_cols=99 Identities=19% Similarity=0.149 Sum_probs=79.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-CCcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-GVRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-GvDaVIh~a 171 (209)
+++||||||||+||++++++|+++|++|++++|++..... ..+..++++.+|++|++++.+++. ++|.|||++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 3589999999999999999999999999999998754422 123458899999999999999987 899999972
Q ss_pred -------------h-----------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 172 -------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 172 -------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
. +. ++.++++.+.++||++||...+.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~ 137 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI 137 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc
Confidence 0 10 34556677889999999975443
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-13 Score=118.60 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=74.1
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc----CCcEEEEcC-----
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPS----- 171 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~----GvDaVIh~a----- 171 (209)
|||||||||||++++++|+++|+ +|.++.|...... ........+.+|+++++.++.+.+ ++|+|||++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~ 79 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT 79 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence 69999999999999999999998 6888776543321 111112467789999988887664 899999992
Q ss_pred -------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++.++ +|||+||.++|+..
T Consensus 80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~ 121 (314)
T TIGR02197 80 TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDG 121 (314)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCC
Confidence 011 7888998897 79999999999854
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-13 Score=137.59 Aligned_cols=92 Identities=13% Similarity=0.275 Sum_probs=80.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
|+|||||||||||++++++|+++|++|++++|+.... ...+++++.+|++|++.+.++++++|+|||++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~ 77 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDH 77 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHH
Confidence 5799999999999999999999999999999975432 22358899999999999999999999999993
Q ss_pred ---hhH--HHHHHHhCCCCEEEEecccc
Q 028418 172 ---EGF--ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 ---~g~--ll~AA~~aGVkriV~vSS~~ 194 (209)
.++ ++++|++.+++||||+||..
T Consensus 78 vNv~GT~nLLeAa~~~gvkr~V~iSS~~ 105 (854)
T PRK05865 78 INIDGTANVLKAMAETGTGRIVFTSSGH 105 (854)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCcH
Confidence 122 78999999999999999963
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-13 Score=118.05 Aligned_cols=97 Identities=19% Similarity=0.196 Sum_probs=65.8
Q ss_pred EEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcc--hhhh-----------------cCCceEEEEccCCCH------HH
Q 028418 104 VTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN--AMES-----------------FGTYVESMAGDASNK------KF 156 (209)
Q Consensus 104 VTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~--a~~~-----------------~~~~vevv~GDl~D~------~s 156 (209)
|||||||+|++|+++|++++. +|.+|+|+... +.+. ...+++++.||++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999887 89999998743 1111 156899999999885 45
Q ss_pred HHHhhcCCcEEEEcC-----------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 157 LKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 157 L~~AL~GvDaVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+....+.+|+|||++ .|+ +++.|.+...++|+|+||..+.+...
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~ 143 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRP 143 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-T
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCC
Confidence 666678999999992 233 88999888888999999955554443
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.7e-13 Score=111.80 Aligned_cols=100 Identities=17% Similarity=0.220 Sum_probs=80.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
+++||||||||+||++++++|+++|++|+++.|++++.... .+..++++.+|++|++++.++++ ++|
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 83 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD 83 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999988654321 23468899999999999988876 689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccC
Q 028418 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 166 aVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+|||++ .++ +++++++.++++||++||...+..
T Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~ 146 (258)
T PRK12429 84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG 146 (258)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC
Confidence 999972 010 445567788999999999765443
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.9e-13 Score=114.28 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=79.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC-------CcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G-------vDaVIh~a 171 (209)
+++|+||||||+||++++++|+++|++|++++|++...... .+++++++|++|++++.++++. +|+|||++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 35899999999999999999999999999999987654322 4588999999999999998874 69999982
Q ss_pred ----h--------------------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 ----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 ----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. +. +++.+++.+.+|||++||...+...
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 139 (270)
T PRK06179 82 GVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA 139 (270)
T ss_pred CCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC
Confidence 0 11 2344677899999999997655443
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.3e-13 Score=114.67 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=81.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh~a 171 (209)
+++++||||||+||++++++|+++|++|.+++|++++.......+++++.+|++|++++.++++ ++|+|||++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a 82 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA 82 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 5789999999999999999999999999999999876554434468899999999999998886 789999982
Q ss_pred ----h--------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 172 ----E--------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 ----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
. +. +++.+++.+..+||++||.+..
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~ 137 (273)
T PRK06182 83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGK 137 (273)
T ss_pred CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc
Confidence 0 11 4456677888999999997643
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.1e-13 Score=111.24 Aligned_cols=102 Identities=16% Similarity=0.142 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
..++++|||||||+||++++++|+++|++|+++.|++++... ..+..+.++++|++|++.+.++++.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 346799999999999999999999999999999998854321 1234577899999999999887763
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHH-HhCCCCEEEEecccccccC
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAG-SLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA-~~aGVkriV~vSS~~Vyg~ 198 (209)
+|+|||++ . ++ +++++ ++.++++||++||...+..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~ 150 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA 150 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC
Confidence 89999982 0 10 45566 6778999999999765543
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.45 E-value=6.6e-13 Score=110.74 Aligned_cols=99 Identities=15% Similarity=0.163 Sum_probs=76.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHh-------hcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTA-------LRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~A-------L~GvDa 166 (209)
+++|||||||+||++++++|+++|++|+++.|+++..... .+.+++++.+|+.|++++.++ +.++|.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5899999999999999999999999999999987644221 234588999999999965544 456899
Q ss_pred EEEcC----h--------------------hH--HH----HHHHhCCCCEEEEecccccccC
Q 028418 167 IICPS----E--------------------GF--IS----NAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 167 VIh~a----~--------------------g~--ll----~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
|||++ . ++ ++ +.+++.++++||++||...+..
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~ 143 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA 143 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC
Confidence 99982 0 11 23 3346788999999999765544
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.5e-13 Score=113.95 Aligned_cols=97 Identities=13% Similarity=0.251 Sum_probs=77.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
+++|||||||+||++++++|+++|++|.+++|+++.... ..+.+++++.+|++|++++.++++ ++|+|||
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999999999999999998765432 224568899999999999887764 5799999
Q ss_pred cC-------------h-----------hH--HHHHH----HhCCCCEEEEecccccc
Q 028418 170 PS-------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRW 196 (209)
Q Consensus 170 ~a-------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vy 196 (209)
++ . ++ +++++ ++.+.++||++||.+..
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 139 (276)
T PRK06482 83 NAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ 139 (276)
T ss_pred CCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc
Confidence 82 0 11 44554 67788999999997654
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.1e-13 Score=114.83 Aligned_cols=93 Identities=16% Similarity=0.117 Sum_probs=69.3
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-----h----
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-----E---- 172 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-----~---- 172 (209)
|||||||||||++++++|+++|++|++++|++.+........+ .|+.+ ..+.+++.++|+|||++ .
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGY----KPWAP-LAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceee----ecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence 6999999999999999999999999999998876432221111 12322 55678899999999992 0
Q ss_pred -------------hH--HHHHHHhCCCC--EEEEecccccccCC
Q 028418 173 -------------GF--ISNAGSLKGVQ--HVILLSQRQRWHSS 199 (209)
Q Consensus 173 -------------g~--ll~AA~~aGVk--riV~vSS~~Vyg~~ 199 (209)
++ ++++|++++++ ++|+.|+.++|+..
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~ 119 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTS 119 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCC
Confidence 01 77889999984 56667777788754
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-12 Score=107.85 Aligned_cols=103 Identities=11% Similarity=0.099 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh----hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~----~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
+.++||||||||+||++++++|+++|++|+++.|++.+... .....++++.+|++|.+++.++++ ++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 35799999999999999999999999999999998865321 223457889999999999988776 6899
Q ss_pred EEEcC-----h-------------------h--HHHHH----HHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS-----E-------------------G--FISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a-----~-------------------g--~ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|||++ . + .++++ +++.++++||++||...++...
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 149 (239)
T PRK12828 86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP 149 (239)
T ss_pred EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC
Confidence 99972 0 0 03333 3467899999999988776543
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.7e-13 Score=113.13 Aligned_cols=101 Identities=11% Similarity=0.142 Sum_probs=79.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
+++||||||+|+||++++++|+++|++|++++|++++.... .+..+.++.+|++|++++.++++ ++|+||
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 46899999999999999999999999999999988765322 23457889999999999988876 579999
Q ss_pred EcC----h--------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 169 CPS----E--------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 169 h~a----~--------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
|++ . ++ ++++ +++.+.++||++||.+.+...
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~ 144 (277)
T PRK06180 84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM 144 (277)
T ss_pred ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC
Confidence 982 0 11 2333 456677899999997765443
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-12 Score=107.33 Aligned_cols=103 Identities=16% Similarity=0.219 Sum_probs=79.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++||||||||+||++++++|+++|++|.++.|+..+.. ...+.+++++.+|+.|++.+.++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 34579999999999999999999999999988887665321 1223568899999999999988875
Q ss_pred CCcEEEEcC------h------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS------E------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a------~------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
++|.|||++ . +. ++++ +++.++++||++||.+.+...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~ 150 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW 150 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC
Confidence 579999982 0 00 2333 367789999999998776543
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1e-12 Score=109.30 Aligned_cols=103 Identities=15% Similarity=0.167 Sum_probs=80.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-----CCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-----~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..+++|||||||+||++++++|+++|++|++++|++.+..... +..+.++.+|+.|++++.++++ .+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3569999999999999999999999999999999986543211 2347799999999999998875 469
Q ss_pred EEEEcC-----h--------------------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS-----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a-----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|||++ . ++ +++++++.+.++||++||...+....
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 149 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP 149 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC
Confidence 999982 0 00 33445567889999999988766544
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.42 E-value=1e-12 Score=128.13 Aligned_cols=103 Identities=14% Similarity=0.187 Sum_probs=80.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcch--hhhc-------------------------CCceEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNA--MESF-------------------------GTYVESM 147 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a--~~~~-------------------------~~~vevv 147 (209)
..++|||||||||+|++|+++|++.+. +|.+|+|..... .+.+ ...++++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 577999999999999999999998764 679999965321 1000 2358899
Q ss_pred EccCCCH------HHHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhC-CCCEEEEecccccccCCC
Q 028418 148 AGDASNK------KFLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 148 ~GDl~D~------~sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg~~~ 200 (209)
.||++++ +.++.+.+.+|+|||++ .|+ ++++|++. ++++|||+||..||+...
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~ 276 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQ 276 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCC
Confidence 9999997 45666678899999992 122 78888776 589999999999998864
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.7e-12 Score=110.03 Aligned_cols=73 Identities=12% Similarity=0.061 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|+++.|+.+..... .+..+.++.+|++|++.+.++++ .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999999999999976543211 13357789999999999998886 47
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 85 d~vi~~ 90 (287)
T PRK06194 85 HLLFNN 90 (287)
T ss_pred CEEEEC
Confidence 999998
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.3e-12 Score=111.03 Aligned_cols=99 Identities=13% Similarity=0.120 Sum_probs=80.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--------CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--------GvDaVIh~ 170 (209)
+++||||||+|+||++++++|.++|++|.+++|+++........+++++.+|++|++++.++++ .+|.|||+
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~ 83 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNN 83 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEC
Confidence 4689999999999999999999999999999999876654434468899999999998887765 46999997
Q ss_pred C------------------------hh------HHHHHHHhCCCCEEEEeccccccc
Q 028418 171 S------------------------EG------FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 171 a------------------------~g------~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+ .+ .+++++++.+..+||++||...+.
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 140 (277)
T PRK05993 84 GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV 140 (277)
T ss_pred CCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC
Confidence 2 01 045667788899999999976543
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.4e-12 Score=106.52 Aligned_cols=99 Identities=14% Similarity=0.158 Sum_probs=78.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.+..... .+..++++++|++|++++.++++ .+|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 356999999999999999999999999999999987643221 13457899999999999988875 689
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 166 aVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|||++ + ++ +++++++.+.++||++||....
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~ 144 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLAL 144 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhc
Confidence 999982 0 11 3445567788999999997554
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=4e-12 Score=104.71 Aligned_cols=99 Identities=14% Similarity=0.203 Sum_probs=77.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhcC-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------V 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~G-------v 164 (209)
++++||||||+|+||++++++|+++|++|.++.|++.+.... .+..++++.+|+.|++++.+++++ +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 346899999999999999999999999999999988654221 234578999999999999888764 5
Q ss_pred cEEEEcC----h--------------------hH--HHHHH----HhCCCCEEEEecccccc
Q 028418 165 RSIICPS----E--------------------GF--ISNAG----SLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a----~--------------------g~--ll~AA----~~aGVkriV~vSS~~Vy 196 (209)
|+|||++ . +. +++++ .+.++++||++||....
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~ 145 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGV 145 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc
Confidence 9999982 0 00 23333 56788999999997543
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.9e-12 Score=104.73 Aligned_cols=101 Identities=18% Similarity=0.287 Sum_probs=80.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc---CCcEEEEcC-h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPS-E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~a-~ 172 (209)
..++||||||||+||++++++|+++|+ +|++++|++++... .+.+++++.+|+.|++.+.++++ .+|+|||++ .
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 83 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI 83 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 456899999999999999999999999 99999998876543 44578999999999999998887 479999982 0
Q ss_pred ------------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 173 ------------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 ------------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
+. ++++ +++.+..+||++||...+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~ 140 (238)
T PRK08264 84 FRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF 140 (238)
T ss_pred CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC
Confidence 00 2333 345678899999997766543
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.4e-12 Score=105.61 Aligned_cols=100 Identities=12% Similarity=0.097 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhc---CCcEEEEcC--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS-- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~a-- 171 (209)
++++|||||+|+||+++++.|+++ ++|.+++|++.+..... ..+++++++|++|++.+.++++ ++|+|||++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 468999999999999999999999 99999999876543221 2358899999999999999997 589999982
Q ss_pred --h---------h-----------H------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --E---------G-----------F------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --~---------g-----------~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
. . . +++++++ ..+++|++||..+++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~v~~ss~~~~~~~~ 137 (227)
T PRK08219 82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA-AHGHVVFINSGAGLRANP 137 (227)
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-CCCeEEEEcchHhcCcCC
Confidence 0 0 0 2333333 357999999987765443
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-12 Score=113.74 Aligned_cols=84 Identities=11% Similarity=0.064 Sum_probs=64.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC--
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (209)
+...|+|||||||||||++|+++|+++|++|++.. +|+.|.+.+...++ ++|+|||++
T Consensus 6 ~~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 6 GSATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------GRLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------CccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 44567899999999999999999999999987432 34567777777776 689999992
Q ss_pred ----h-----------------hH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 ----E-----------------GF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 ----~-----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
. ++ ++++|++.|+++ |++||..+|+.
T Consensus 68 ~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~-v~~sS~~vy~~ 116 (298)
T PLN02778 68 TGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL-TNYATGCIFEY 116 (298)
T ss_pred cCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEecceEeCC
Confidence 0 11 789999999975 55566677754
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.2e-12 Score=104.85 Aligned_cols=99 Identities=17% Similarity=0.182 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++||||||+|+||++++++|+++|++|++++|++++... ..+..++++.+|+.|++++.++++ .+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 35689999999999999999999999999999998654321 112458899999999999999886 68
Q ss_pred cEEEEcC----h--------------------hH--HHHH----HHhCCCCEEEEecccccc
Q 028418 165 RSIICPS----E--------------------GF--ISNA----GSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a----~--------------------g~--ll~A----A~~aGVkriV~vSS~~Vy 196 (209)
|+|||++ . ++ ++++ +++.+.++||++||...+
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~ 146 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGP 146 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhh
Confidence 9999982 0 00 3333 356778999999998776
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.8e-12 Score=116.86 Aligned_cols=98 Identities=18% Similarity=0.310 Sum_probs=73.5
Q ss_pred EEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchh---hhc-----CCce----EEEEccCCCHHHHHHhhc--CCcE
Q 028418 102 VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM---ESF-----GTYV----ESMAGDASNKKFLKTALR--GVRS 166 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~---~~~-----~~~v----evv~GDl~D~~sL~~AL~--GvDa 166 (209)
||||||+|.||+.||++|++.+ .+++++.|+..+.- ..+ ..++ ..+.||++|++.+..+++ ++|.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999998 47999999876431 112 1234 346999999999999999 9999
Q ss_pred EEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 167 IICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 167 VIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|||.+ .|+ ++++|.+++|+|||++||--+...+
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Pt 135 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPT 135 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCC
Confidence 99982 133 8999999999999999997665444
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.5e-12 Score=106.36 Aligned_cols=103 Identities=16% Similarity=0.228 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||||+||++++++|+++|++|.+++|+....... .+..++++.+|++|++++.++++ .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 367999999999999999999999999999999987654321 23458899999999999988875 58
Q ss_pred cEEEEcC-------------h-----------hH--H----HHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.|||++ . +. + ++++++.+.++||++||.+.+....
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~ 147 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS 147 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC
Confidence 9999982 0 00 2 2334467889999999988765543
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.6e-12 Score=106.24 Aligned_cols=99 Identities=13% Similarity=0.101 Sum_probs=77.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhcC------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRG------ 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~G------ 163 (209)
..+++|||||+|+||++++++|+++|++|+++.|++++.... ....+.++++|++|++++.++++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 357999999999999999999999999999999987654211 122466789999999999888864
Q ss_pred -CcEEEEcC----h-----------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 164 -VRSIICPS----E-----------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 -vDaVIh~a----~-----------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|+|||++ . +. +++++++.+.++||++||...+
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 149 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGV 149 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhh
Confidence 79999982 0 00 3445566788999999996654
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.8e-12 Score=105.87 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=78.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
|+||||||||+||.++++.|+++|++|.++.|++++.... .+.+++++.+|++|++++.++++ ++|.|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5899999999999999999999999999999988654322 24568899999999999888775 7899999
Q ss_pred cC---h----------------------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 170 PS---E----------------------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a---~----------------------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
++ . ++ ++.++++.+.++||++||.....
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 139 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW 139 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC
Confidence 72 0 10 34455677889999999976543
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.2e-12 Score=104.48 Aligned_cols=101 Identities=17% Similarity=0.241 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|++++|++.+... ..+.+++++.+|++|++++.++++ ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 35789999999999999999999999999999998765322 123468899999999999998886 79
Q ss_pred cEEEEcC----h--------------------hH--HHH----HHHhCCCCEEEEecccccccC
Q 028418 165 RSIICPS----E--------------------GF--ISN----AGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 165 DaVIh~a----~--------------------g~--ll~----AA~~aGVkriV~vSS~~Vyg~ 198 (209)
|+|||++ . ++ +.+ ...+.+.+++|++||...+..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 149 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG 149 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC
Confidence 9999982 0 00 223 334677899999999765443
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.6e-12 Score=107.66 Aligned_cols=102 Identities=13% Similarity=0.170 Sum_probs=79.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
.++||||||+|+||++++++|+++|++|++++|++++... ..+..+.++.+|++|++++.++++ ++|+||
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3589999999999999999999999999999998865432 223457889999999999887765 579999
Q ss_pred EcC----h--------------------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 169 CPS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 169 h~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|++ . ++ ++..+++.+.++||++||.+.+...+
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~ 144 (275)
T PRK08263 83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP 144 (275)
T ss_pred ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC
Confidence 982 0 11 23334667889999999987665443
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.4e-12 Score=104.91 Aligned_cols=103 Identities=14% Similarity=0.128 Sum_probs=80.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||+.++++|+++|++|++++|++++.... .+.++.++.+|++|++++.++++ .+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999988654321 13468899999999999888875 48
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.|||++ . ++ +++.+++.+..+||++||...++...
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 150 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP 150 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC
Confidence 9999982 0 00 23334566778999999988765543
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.1e-12 Score=103.11 Aligned_cols=96 Identities=18% Similarity=0.200 Sum_probs=77.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc------CCcEEEEcC-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPS- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~------GvDaVIh~a- 171 (209)
.++||||||||+||++++++|+++|++|+++.|++... . ..+++.+|++|++++.++++ ++|+|||++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---F--PGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---c--CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 46899999999999999999999999999999987652 1 13688999999999888876 789999982
Q ss_pred ------------h-----------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 ------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 ------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. +. +++++++.+.++||++||..+++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 134 (234)
T PRK07577 78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL 134 (234)
T ss_pred CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC
Confidence 0 11 3455667788999999998776543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.2e-12 Score=103.90 Aligned_cols=100 Identities=19% Similarity=0.279 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
.+++||||||||+||++++++|+++|++|++++|++.+.... .. .+++++.+|++|++++.++++ ++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357899999999999999999999999999999988654322 11 458899999999999988876 789
Q ss_pred EEEEcC----h--------------------hH--HHHHHH---hCCCCEEEEeccccccc
Q 028418 166 SIICPS----E--------------------GF--ISNAGS---LKGVQHVILLSQRQRWH 197 (209)
Q Consensus 166 aVIh~a----~--------------------g~--ll~AA~---~aGVkriV~vSS~~Vyg 197 (209)
+|||++ . +. +++++. ..+.++||++||...+.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 145 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN 145 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc
Confidence 999972 0 00 333432 24668999999976543
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.6e-12 Score=107.63 Aligned_cols=106 Identities=15% Similarity=0.192 Sum_probs=80.0
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc------
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
....++++|||||+|+||++++++|+++|++|.++.|+....... .+..++++.+|++|++++.++++
T Consensus 6 ~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (274)
T PRK07775 6 PHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL 85 (274)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 345567999999999999999999999999999999977543211 13457889999999999988775
Q ss_pred -CCcEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 163 -GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 -GvDaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|+|||++ . ++ ++++ ..+.+..+||++||...+...+
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~ 154 (274)
T PRK07775 86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP 154 (274)
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC
Confidence 579999982 0 01 2223 3355678999999987765443
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.2e-11 Score=102.00 Aligned_cols=98 Identities=17% Similarity=0.250 Sum_probs=74.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.+++||||||||+||+++++.|+++|++|+++.|++.+.. ...+..+.++.+|++|++++.++++ +
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3469999999999999999999999999999998765311 1123457889999999999888775 6
Q ss_pred CcEEEEcC-------------h-----------hH--HH----HHHHhCCCCEEEEeccccc
Q 028418 164 VRSIICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~V 195 (209)
+|+|||++ . +. ++ +++.+.+.++||++||...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~ 145 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVG 145 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccccc
Confidence 89999982 0 00 23 3344567889999999643
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.2e-11 Score=103.40 Aligned_cols=98 Identities=14% Similarity=0.199 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h------hhcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~------~~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++|||||||+||++++++|+++|++|++++|+.... . ...+..+.++.+|++|++.+.++++ +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 357899999999999999999999999999999976431 1 1113457889999999999987775 6
Q ss_pred CcEEEEcC-h-----------------hH--HHHHHHhC--CCCEEEEeccccc
Q 028418 164 VRSIICPS-E-----------------GF--ISNAGSLK--GVQHVILLSQRQR 195 (209)
Q Consensus 164 vDaVIh~a-~-----------------g~--ll~AA~~a--GVkriV~vSS~~V 195 (209)
+|+|||++ . ++ +++++... .-.+||++||..+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~ 138 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQA 138 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchh
Confidence 89999982 0 11 56666542 2358999999654
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.5e-12 Score=104.25 Aligned_cols=101 Identities=12% Similarity=0.137 Sum_probs=77.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-hhcCCceEEEEccCCCHHHHHHhhc-----------CCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-----------GVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-~~~~~~vevv~GDl~D~~sL~~AL~-----------GvDa 166 (209)
++++|||||||+||++++++|+++|++|.+++|+..+.. ...+.++.++.+|++|++++.+++. ..|.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 468999999999999999999999999999999875432 2234468899999999999888543 3678
Q ss_pred EEEcC-------------------------hhH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 167 IICPS-------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 167 VIh~a-------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+||++ .+. +++.+.+.+.++||++||...+...
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 144 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY 144 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC
Confidence 88871 011 2344455677899999998766543
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.2e-12 Score=109.04 Aligned_cols=102 Identities=15% Similarity=0.170 Sum_probs=79.7
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh----h---c-CCceEEEEccCCCHHHHHHhhc----
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S---F-GTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~----~---~-~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
....+++||||||+|+||++++++|+++|++|+++.|+.++... . . +..++++.+|++|++++.++++
T Consensus 12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 34566899999999999999999999999999999998765321 1 1 2357899999999999988765
Q ss_pred ---CCcEEEEcC-----------h-----------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 163 ---GVRSIICPS-----------E-----------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 163 ---GvDaVIh~a-----------~-----------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.+|+|||++ + +. +++.+++.+..+||++||.+.+
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~ 156 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHR 156 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHh
Confidence 589999982 0 11 4555666777899999997644
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=8.6e-12 Score=105.48 Aligned_cols=97 Identities=18% Similarity=0.116 Sum_probs=75.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh----cCCceEEEEccCCCHHHHHHhhc--------CCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALR--------GVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~----~~~~vevv~GDl~D~~sL~~AL~--------GvDa 166 (209)
|+++|||||||+||++++++|+++|++|.++.|++++.... .+..++++.+|++|.+.+.++++ .+|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 46899999999999999999999999999999988764322 13468999999999999988775 4599
Q ss_pred EEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEeccccc
Q 028418 167 IICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQR 195 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~V 195 (209)
|||++ . ++ ++++ .+..+..+||++||...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 139 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASA 139 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhh
Confidence 99982 0 00 3333 34566789999999654
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.3e-11 Score=103.23 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEE-EEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~Vra-LvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.+++|||||||+||++++++|+++|++|++ +.|+..+... ..+.+++++.+|++|++.+.++++ .+
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL 83 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999887 4676654321 123457889999999999988876 57
Q ss_pred cEEEEcC----h--------------------hH--H----HHHHHhCCCCEEEEecccccccC
Q 028418 165 RSIICPS----E--------------------GF--I----SNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 165 DaVIh~a----~--------------------g~--l----l~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
|+|||.+ . ++ + +++.++.+.++||++||...+..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 147 (250)
T PRK08063 84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY 147 (250)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC
Confidence 9999972 0 11 2 33344567789999999766543
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-11 Score=103.37 Aligned_cols=101 Identities=15% Similarity=0.134 Sum_probs=74.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhh----h--cCCceEEEEccCCCHHHHHHhhc--------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME----S--FGTYVESMAGDASNKKFLKTALR-------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~----~--~~~~vevv~GDl~D~~sL~~AL~-------- 162 (209)
..++|+||||+|+||++++++|+++|++|.++ .|+.++... . .+..++++.+|++|++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 45799999999999999999999999999886 466543321 1 12357889999999999988876
Q ss_pred -----CCcEEEEcC----h--------------------hH--HHHHHHh--CCCCEEEEecccccccC
Q 028418 163 -----GVRSIICPS----E--------------------GF--ISNAGSL--KGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 -----GvDaVIh~a----~--------------------g~--ll~AA~~--aGVkriV~vSS~~Vyg~ 198 (209)
++|+|||++ . ++ +++++.. ....+||++||..++..
T Consensus 85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~ 153 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG 153 (254)
T ss_pred ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC
Confidence 589999982 0 00 3344332 23368999999877654
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-11 Score=104.20 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||+|+||+++++.|+++|++|.++.|+..+.... .+..+.++.+|++|++++.++++ .
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3457999999999999999999999999999999987543211 23457889999999999976664 5
Q ss_pred CcEEEEcC-------------h-----------hH--HHHHHHh-----CCCCEEEEecccccccC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNAGSL-----KGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~AA~~-----aGVkriV~vSS~~Vyg~ 198 (209)
+|+|||++ . +. +++++.. .+..+||++||...+..
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~ 155 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGG 155 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccC
Confidence 79999982 0 11 4554433 47789999999765543
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.5e-12 Score=106.45 Aligned_cols=101 Identities=17% Similarity=0.107 Sum_probs=78.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
.++||||||||.||++++++|+++|++|+++.|++++..... ...++++.+|++|++++.++++ ++|.+||
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999999999999999999999999999999886653221 1247889999999999776664 5799999
Q ss_pred cC----h--------------------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 170 PS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ . +. ++..+++.+..+||++||...+...
T Consensus 85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 144 (273)
T PRK07825 85 NAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV 144 (273)
T ss_pred CCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC
Confidence 82 0 00 3455667888999999998765433
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=3e-11 Score=100.20 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=76.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc----hhh------hcCCceEEEEccCCCHHHHHHhhc-----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AME------SFGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~----a~~------~~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
.+++||||||+|+||++++++|+++|++|++++|.... ... ..+..++++.+|+.|++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999998764321 111 113457899999999999988873
Q ss_pred --CCcEEEEcC---h---------------------hH--HHHHHH-----hCCCCEEEEecccccccC
Q 028418 163 --GVRSIICPS---E---------------------GF--ISNAGS-----LKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 --GvDaVIh~a---~---------------------g~--ll~AA~-----~aGVkriV~vSS~~Vyg~ 198 (209)
++|.|||++ . ++ +++++. +.+.++||++||...+..
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 153 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG 153 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC
Confidence 689999982 0 01 455554 568899999999776543
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.7e-11 Score=102.47 Aligned_cols=102 Identities=18% Similarity=0.174 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|+++.|++...... ....+.++..|++|++++.++++ .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999987543211 12356789999999998887765 68
Q ss_pred cEEEEcC-h--------------------------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 165 RSIICPS-E--------------------------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 165 DaVIh~a-~--------------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
|.|||++ . ++ +++++ .+.+.++||++||..++...
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 152 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS 152 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc
Confidence 9999972 0 00 23333 34467899999998776543
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-11 Score=102.00 Aligned_cols=100 Identities=13% Similarity=0.130 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.+++||||||||+||++++++|+++|++|+++ .|++.+.... .+..+.++.+|++|++++.++++ +
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 45789999999999999999999999999999 8877543211 23458899999999999988876 7
Q ss_pred CcEEEEcC-------------h-----------hH--HH----HHHHhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ . +. ++ +..++.+.++||++||...+.
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~ 147 (247)
T PRK05565 84 IDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLI 147 (247)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhcc
Confidence 99999972 0 11 23 334456778999999976543
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1e-11 Score=106.42 Aligned_cols=93 Identities=13% Similarity=0.204 Sum_probs=80.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---hh--
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---EG-- 173 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a---~g-- 173 (209)
|+|.|.||||.+|+++++.++.+||+|+|++|++++.... .++.+++.|+.|++++.+.+.|.|+||.. . .+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCChh
Confidence 6899999999999999999999999999999999987543 46889999999999999999999999987 1 11
Q ss_pred --------HHHHHHHhCCCCEEEEecccc
Q 028418 174 --------FISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 174 --------~ll~AA~~aGVkriV~vSS~~ 194 (209)
.++++.+.+|+.|++.+...+
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 177788888999999986543
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-11 Score=105.52 Aligned_cols=98 Identities=13% Similarity=0.188 Sum_probs=74.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHH---h---hcCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKT---A---LRGV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~---A---L~Gv 164 (209)
++++|||||||+||+++++.|+++|++|++++|+++..... .+..++++.+|++|++++.+ + +..+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 45799999999999999999999999999999987643211 12458899999999998765 1 2357
Q ss_pred cEEEEcC-------------h-----------hH--HH----HHHHhCCCCEEEEecccccc
Q 028418 165 RSIICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~Vy 196 (209)
|+|||++ . ++ ++ +++++.+.++||++||....
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~ 144 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGR 144 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccc
Confidence 9999982 0 11 23 33567788999999996543
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.8e-11 Score=102.52 Aligned_cols=98 Identities=13% Similarity=0.072 Sum_probs=75.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhcC----CcEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG----VRSI 167 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~G----vDaV 167 (209)
+++|+||||||+||+++++.|+++|++|.+++|++++.... .+.+++++++|++|++.+.++++. +|.|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 46899999999999999999999999999999988654321 134688999999999998887764 5999
Q ss_pred EEcC-------------h-----------hH--HH----HHHHhCCCCEEEEecccccc
Q 028418 168 ICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 168 Ih~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~Vy 196 (209)
||++ + ++ ++ ..+.+.+..+||++||....
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 139 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGD 139 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccccc
Confidence 9861 0 11 22 33445678999999997543
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.7e-11 Score=101.35 Aligned_cols=98 Identities=17% Similarity=0.217 Sum_probs=75.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------c-CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~-~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
++++|||||||+||++++++|+++|++|.+++|++.+.... . +..++++.+|++|++++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999988654321 1 3357889999999998877654 6
Q ss_pred CcEEEEcC-------------h-----------hH--H----HHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vy 196 (209)
+|.|||++ . +. + ++.+++.+..+||++||....
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 144 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAV 144 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence 89999982 0 00 2 233456788999999996543
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-11 Score=102.75 Aligned_cols=98 Identities=16% Similarity=0.128 Sum_probs=77.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--------CCcEEEEcC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICPS 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--------GvDaVIh~a 171 (209)
++||||||||+||+++++.|+++|++|+++.|++++.......+++++.+|++|++.+.++++ .+|.+||++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 479999999999999999999999999999998876544333457889999999998777653 357888872
Q ss_pred -h-----------------------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 172 -E-----------------------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 172 -~-----------------------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
. ++ +++++++.+.++||++||...+.
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 138 (256)
T PRK08017 83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI 138 (256)
T ss_pred CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc
Confidence 0 01 35667788889999999975443
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.7e-12 Score=114.13 Aligned_cols=103 Identities=19% Similarity=0.188 Sum_probs=78.4
Q ss_pred CCccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC--cch--hhh-cCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK--RNA--MES-FGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~--~~a--~~~-~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
|+.+..+ ..+|+||||.||||+|||+.|+.+||+|.|++--. .+. ... -.+.++.+.-|+..| .+.+||
T Consensus 20 ~~~~p~~-~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD 93 (350)
T KOG1429|consen 20 EQVKPSQ-NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVD 93 (350)
T ss_pred hcccCCC-CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhh
Confidence 4444433 37999999999999999999999999999998322 111 111 125678888888766 788899
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.|||++ .++ ++-.|++.+ +||+|.|+..|||++.
T Consensus 94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~ 149 (350)
T KOG1429|consen 94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPL 149 (350)
T ss_pred hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcc
Confidence 999982 122 566788888 9999999999999854
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.9e-11 Score=103.58 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhcC-------CcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRG-------VRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~G-------vDa 166 (209)
+++||||||||+||++++++|+++|++|.+++|++++.... .. .++.++.+|++|++++.++++. +|.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 46899999999999999999999999999999987654321 11 1578999999999999888753 699
Q ss_pred EEEcC---------h----------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 167 IICPS---------E----------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 167 VIh~a---------~----------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+||++ . ++ ++.++++.+..+||++||...+
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~ 142 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGV 142 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhc
Confidence 99971 0 11 3446677788999999996554
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.5e-11 Score=102.00 Aligned_cols=98 Identities=16% Similarity=0.211 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
..++++|||||+|+||++++++|+++|++|.++.|+.... ..++++++|++|++++.++++ .+|.|||
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4567999999999999999999999999999999986542 247889999999999988875 6899999
Q ss_pred cC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 170 PS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ + ++ ++++ .++.+..+||++||...+...
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 138 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT 138 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC
Confidence 72 0 11 2333 345567899999998776543
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.1e-11 Score=103.01 Aligned_cols=101 Identities=14% Similarity=0.140 Sum_probs=79.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
++||||||||+||++++++|+++|++|.+++|+.++... ..+..+.++.+|++|++++.++++ ++|.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999998765432 123467889999999999888775 6899
Q ss_pred EEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|||++ . +. +++.+++.+..+||++||...+....
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~ 144 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP 144 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC
Confidence 99982 0 00 34446677889999999987654443
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.6e-11 Score=99.09 Aligned_cols=100 Identities=13% Similarity=0.130 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhh-------cCCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL-------~GvDa 166 (209)
..++++|||||||+||+++++.|+++|+.|.+..|++++... ..+.+++++.+|++|.+++.+++ ..+|+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 346799999999999999999999999999888887765432 22346889999999999988775 36899
Q ss_pred EEEcC----h--------------------hH--HHHH----HHhCCCCEEEEecccccc
Q 028418 167 IICPS----E--------------------GF--ISNA----GSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 167 VIh~a----~--------------------g~--ll~A----A~~aGVkriV~vSS~~Vy 196 (209)
|||++ . +. ++++ +++.+.++||++||...+
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 143 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV 143 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC
Confidence 99982 0 11 2333 334577899999996543
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.5e-11 Score=117.63 Aligned_cols=84 Identities=10% Similarity=0.075 Sum_probs=67.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC--
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (209)
+.+.|+|||||||||||++|++.|.++|++|.. ..+|++|++.+.++++ +.|+|||++
T Consensus 377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~ 438 (668)
T PLN02260 377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGV 438 (668)
T ss_pred CCCCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------eccccccHHHHHHHHHhhCCCEEEECCcc
Confidence 556779999999999999999999999998731 1256889999988887 789999992
Q ss_pred -----h----------------hH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 -----E----------------GF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 -----~----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
. ++ ++++|++.|++ +|++||..||+.
T Consensus 439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~ 487 (668)
T PLN02260 439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEY 487 (668)
T ss_pred cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecC
Confidence 0 11 78999999996 567788888753
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.4e-11 Score=102.13 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=62.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c-CCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~-~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+.+++|||||+|+||++++++|+++|++|+++.|+++..... . ...++++.+|++|++++.++++ ++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34668999999999999999999999999999999987644321 1 1146889999999999888774 78
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 88 d~vi~~ 93 (264)
T PRK12829 88 DVLVNN 93 (264)
T ss_pred CEEEEC
Confidence 999998
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.3e-11 Score=101.63 Aligned_cols=101 Identities=15% Similarity=0.165 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++||||||+|+||+.++++|+++|++|.++.|++++.... .+..+.++.+|++|++.+.++++ .
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4567999999999999999999999999999999987654321 12347889999999999988876 4
Q ss_pred CcEEEEcC-h-----------------------hH--HHHHH----HhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS-E-----------------------GF--ISNAG----SLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a-~-----------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ . ++ +++++ ++.+.++||++||.....
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~ 151 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL 151 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc
Confidence 79999982 0 11 33333 345788999999976543
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.6e-11 Score=118.69 Aligned_cols=103 Identities=21% Similarity=0.332 Sum_probs=84.2
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchh-------hhcC-CceEEEEccCCCHHHHHHhhcC--
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM-------ESFG-TYVESMAGDASNKKFLKTALRG-- 163 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~-------~~~~-~~vevv~GDl~D~~sL~~AL~G-- 163 (209)
....+++||||||+|-||+.+++++++.+ .+++.+.|++.+.- ..++ ..+.++.||+.|.+.+..+|++
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k 325 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK 325 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence 35668899999999999999999999987 46788888875431 1122 4567899999999999999999
Q ss_pred CcEEEEcC--------------------hhH--HHHHHHhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ .|+ +++||.++||++||++|+-.+-.
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~ 381 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVN 381 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccC
Confidence 99999982 133 89999999999999999965433
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.1e-11 Score=102.15 Aligned_cols=100 Identities=13% Similarity=0.120 Sum_probs=77.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++ .
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3467999999999999999999999999999999987654321 13457889999999999987765 6
Q ss_pred CcEEEEcC-------------h-----------hH--HHHHHH-----hCCCCEEEEecccccc
Q 028418 164 VRSIICPS-------------E-----------GF--ISNAGS-----LKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~AA~-----~aGVkriV~vSS~~Vy 196 (209)
+|+|||++ . ++ +.+++. ..+..+||++||....
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~ 151 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR 151 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc
Confidence 79999972 0 01 344443 2566899999996543
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2e-11 Score=107.46 Aligned_cols=98 Identities=17% Similarity=0.171 Sum_probs=77.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC--CceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~--~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
..++||||||||+||++++++|+++|++|+++.|++++...... ..++++.+|++|++++.++++ ++|+||
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 45799999999999999999999999999999998866532211 247899999999999887763 689999
Q ss_pred EcC-----------h-----------hH------HHHHHHhCCCCEEEEeccccc
Q 028418 169 CPS-----------E-----------GF------ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 169 h~a-----------~-----------g~------ll~AA~~aGVkriV~vSS~~V 195 (209)
|++ . ++ ++.++++.+..|||++||.+.
T Consensus 105 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~ 159 (315)
T PRK06196 105 NNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGH 159 (315)
T ss_pred ECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHh
Confidence 972 0 11 344566677789999999754
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.8e-11 Score=105.33 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++||||||+|+||++++++|+++|++|.+++|+.+..... .+..+.++.+|++|++++.++++ .
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3457899999999999999999999999999999987654321 13347789999999999988887 7
Q ss_pred CcEEEEcC---------h-----------------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS---------E-----------------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a---------~-----------------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ + +. ++..+++.+..+||++||.+++.
T Consensus 118 id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 183 (293)
T PRK05866 118 VDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS 183 (293)
T ss_pred CCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence 89999982 0 00 22334577889999999987654
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.2e-11 Score=101.65 Aligned_cols=97 Identities=18% Similarity=0.150 Sum_probs=76.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh----cCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~----~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
++++|||||||+||++++++|+++|++|.+++|++++.... ....++++.+|+.|++++.+++. ++|.|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45899999999999999999999999999999988654321 22458899999999999988876 47999
Q ss_pred EEcC-------------h-----------hH--HH----HHHHhCCCCEEEEeccccc
Q 028418 168 ICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 168 Ih~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~V 195 (209)
||++ + +. ++ ..+++.+.++||++||...
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 139 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG 139 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh
Confidence 9982 0 00 22 3345677889999999643
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.1e-11 Score=101.15 Aligned_cols=100 Identities=15% Similarity=0.105 Sum_probs=76.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh--h---hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--E---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~--~---~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..+++|||||+|+||++++++|+++|++|.++.|++.... . ..+..+.++.+|++|++++.++++ ++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 4578999999999999999999999999999999753211 1 123457789999999988877765 679
Q ss_pred EEEEcCh-------------------------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 166 SIICPSE-------------------------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 166 aVIh~a~-------------------------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.|||++. ++ +++.+++.+..+||++||...++
T Consensus 87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 149 (260)
T PRK12823 87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG 149 (260)
T ss_pred EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC
Confidence 9999820 00 34455667788999999987664
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=8e-11 Score=97.93 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|.||++++++|+++|++|.++.|++++.... .+..++++.+|++|++++.++++ ++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 457999999999999999999999999999999987644321 13458899999999999988773 68
Q ss_pred cEEEEcC-h-----------------------hH--HHHH----HHhCCCCEEEEecccccccC
Q 028418 165 RSIICPS-E-----------------------GF--ISNA----GSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 165 DaVIh~a-~-----------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~ 198 (209)
|+|||++ . ++ ++++ ..+.+..+||++||...+..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 149 (250)
T PRK12939 86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG 149 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC
Confidence 9999982 0 01 2333 33445679999999765443
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.8e-11 Score=110.04 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=80.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCc--EEEEEe-----CCcchhhhc-CCceEEEEccCCCHHHHHHhhc--CCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTR--IKALVK-----DKRNAMESF-GTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~--VraLvR-----~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~--GvDaVIh 169 (209)
+++||||+.||||+++|+.++.+..+ |.++++ +.+...... .++..+++||+.|.+.+.+.++ .+|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 58999999999999999999998754 455543 112222222 2578999999999999999998 6999999
Q ss_pred cC--------------------hhH--HHHHHHhCCCC-EEEEecccccccCCCC
Q 028418 170 PS--------------------EGF--ISNAGSLKGVQ-HVILLSQRQRWHSSSN 201 (209)
Q Consensus 170 ~a--------------------~g~--ll~AA~~aGVk-riV~vSS~~Vyg~~~~ 201 (209)
.+ .|+ +++|+++...+ ||+++|+-.|||+-..
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~ 135 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGL 135 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccC
Confidence 82 133 89999998875 9999999999998754
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.8e-11 Score=101.56 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=61.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (209)
++++|||||||+||++++++|+++|++|.+++|+..+.......+++++.+|++|++.+.++++ ++|.|||+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 4689999999999999999999999999999998866544333457889999999999887763 67999998
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.3e-11 Score=100.01 Aligned_cols=71 Identities=15% Similarity=0.193 Sum_probs=61.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC-------CcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G-------vDaVIh~ 170 (209)
..+++|||||+|+||++++++|+++|++|.++.|++++ ...+..++++++|+.|++++.++++. +|+|||+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 82 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNN 82 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45799999999999999999999999999999998754 12234688999999999999888764 5999997
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.9e-11 Score=111.43 Aligned_cols=100 Identities=19% Similarity=0.248 Sum_probs=80.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc--chh----h----------hcCCceEEEEccCC------CHHH
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR--NAM----E----------SFGTYVESMAGDAS------NKKF 156 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~--~a~----~----------~~~~~vevv~GDl~------D~~s 156 (209)
++||+||||||+|+++++.|+.+-. +|.|+||..+ .+. . .+..+++++.||+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 4799999999999999999998765 9999999654 111 1 22366999999998 4557
Q ss_pred HHHhhcCCcEEEEc-C----------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 157 LKTALRGVRSIICP-S----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 157 L~~AL~GvDaVIh~-a----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+.+.-+.+|.|||+ + .|+ +++.|.....|.+.|+||++|+...
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~ 142 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETE 142 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeecccc
Confidence 77777889999999 2 233 7888888889999999999997544
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.26 E-value=6e-11 Score=98.22 Aligned_cols=97 Identities=20% Similarity=0.222 Sum_probs=74.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe-CCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR-~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
+++|||||||+||++++++|+++|++|.++.| ++..... ..+.++.++.+|++|++.+.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 47999999999999999999999999999998 4433221 123458899999999998877764 479
Q ss_pred EEEEcC-h-----------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 166 SIICPS-E-----------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 166 aVIh~a-~-----------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.|||++ . +. ++.++++.++++||++||....
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~ 141 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQ 141 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc
Confidence 999982 0 00 3445567788999999996543
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.8e-11 Score=100.16 Aligned_cols=73 Identities=10% Similarity=0.150 Sum_probs=61.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++||||||||+||++++++|+++|++|.++.|++...... .+..++++..|++|++++.++++ .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 357899999999999999999999999999999987654321 13457899999999999887764 57
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 84 d~vi~~ 89 (258)
T PRK07890 84 DALVNN 89 (258)
T ss_pred cEEEEC
Confidence 999998
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.3e-11 Score=99.52 Aligned_cols=73 Identities=22% Similarity=0.296 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhc---CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR---GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~---GvDaVIh~ 170 (209)
..++++||||+|+||+++++.|+++|++|+++.|++++...... .+++++.+|++|++.+.++++ .+|+|||+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ 84 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC 84 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence 45799999999999999999999999999999998866533211 236789999999999988886 48999998
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=7.3e-11 Score=99.76 Aligned_cols=101 Identities=12% Similarity=0.178 Sum_probs=77.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
+++||||||+|+||++++++|+++|++|.+++|++.+.... .+..+.++.+|++|++.+.++++ ++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35899999999999999999999999999999987553211 23467889999999999988876 689
Q ss_pred EEEEcC---------hh----------------H--HHHHHH---hCCCCEEEEecccccccCC
Q 028418 166 SIICPS---------EG----------------F--ISNAGS---LKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 166 aVIh~a---------~g----------------~--ll~AA~---~aGVkriV~vSS~~Vyg~~ 199 (209)
+|||++ .. + +++++. ..+..+||++||...+...
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~ 144 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV 144 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC
Confidence 999982 00 0 234442 2345899999998776544
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.2e-11 Score=100.67 Aligned_cols=102 Identities=15% Similarity=0.174 Sum_probs=77.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh----c----CCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F----GTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~----~----~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
.++++|||||+|+||+++++.|+++|++|.++.|++++.... . ..++.++.+|++|++.+.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 357999999999999999999999999999999987553211 1 2357889999999999988876
Q ss_pred CCcEEEEcC--h-----------------------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS--E-----------------------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a--~-----------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|.|||++ . +. +++++ .+.+-.+||++||...+...
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 153 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH 153 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC
Confidence 689999982 0 00 23333 33455799999998776543
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.6e-11 Score=99.38 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...+++|||||+|+||++++++|+++|++|.++.|+++..... .+..+.++++|++|++.+.++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3467899999999999999999999999999999987654321 23457889999999999988875
Q ss_pred -CCcEEEEcC-------------h-----------hH--HHH----HHHhCCCCEEEEecccccccCC
Q 028418 163 -GVRSIICPS-------------E-----------GF--ISN----AGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 -GvDaVIh~a-------------~-----------g~--ll~----AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|++||++ . +. +++ ..++.+..+||++||...+...
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 152 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII 152 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC
Confidence 689999982 0 00 222 3345667899999998665443
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.8e-11 Score=97.40 Aligned_cols=100 Identities=18% Similarity=0.154 Sum_probs=77.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhh------hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
+++|||||+|+||++++++|+++|++|.++.|+... ... ..+..+.++.+|++|++++.++++ .+|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999999999999998532 111 112358899999999999888875 479
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 166 aVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|||++ + +. +++++++.+..+||++||...+...
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~ 146 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ 146 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC
Confidence 999982 0 11 2455567788999999998766443
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.2e-10 Score=97.44 Aligned_cols=98 Identities=11% Similarity=0.096 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC-------CcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G-------vDaVIh 169 (209)
..++++|||||+|+||++++++|+++|++|.+++|+.. ...+..++++++|++|++++.++++. +|.|||
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL---TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh---hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34579999999999999999999999999999999871 22244588999999999999998864 799999
Q ss_pred cC----h--------------------hH--HHHHH----HhCCCCEEEEeccccccc
Q 028418 170 PS----E--------------------GF--ISNAG----SLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a----~--------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg 197 (209)
++ . +. +++++ ++.+-.+||++||.....
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~ 140 (252)
T PRK08220 83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV 140 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc
Confidence 82 0 00 33333 445677999999976543
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.5e-11 Score=122.97 Aligned_cols=100 Identities=18% Similarity=0.248 Sum_probs=80.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC----CcEEEEEeCCcchhh--h--------------cCCceEEEEccCCC-----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAME--S--------------FGTYVESMAGDASN----- 153 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G----~~VraLvR~~~~a~~--~--------------~~~~vevv~GDl~D----- 153 (209)
.++|||||||||+|++++++|+.++ ++|++++|+...... . +..+++++.+|+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4689999999999999999999887 899999997643211 0 11368999999974
Q ss_pred -HHHHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhCCCCEEEEecccccccC
Q 028418 154 -KKFLKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 154 -~~sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+.+.+++.++|+|||++ .|+ ++++|.+.++++|||+||.++|+.
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~ 1115 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDT 1115 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCc
Confidence 466778888999999982 122 788999999999999999999863
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.5e-11 Score=97.77 Aligned_cols=100 Identities=7% Similarity=0.103 Sum_probs=75.3
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC-Ccchhhh---c----C-CceEEEEccCCCHHHHHHhhc-------CC
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES---F----G-TYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~-~~~a~~~---~----~-~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++|||||+|+||+++++.|+++|++|+++.|+ .+..... + . ..+..+++|++|++++.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999998 4332211 1 1 123468899999999877764 67
Q ss_pred cEEEEcC-------------hh-----------------HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS-------------EG-----------------FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a-------------~g-----------------~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.|||++ .. .+++++++.+.++||++||...+....
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~ 146 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP 146 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC
Confidence 9999982 00 045566777889999999987765443
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.8e-11 Score=112.00 Aligned_cols=102 Identities=23% Similarity=0.336 Sum_probs=74.2
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-----CceEEEEccCCCHHHHHHhhc-----CC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALR-----GV 164 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-----~~vevv~GDl~D~~sL~~AL~-----Gv 164 (209)
.....+.|||+||||.+|+.+++.|+++|+.||+++|+.+++...++ .....+..|...+.+...-+. ++
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~ 154 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV 154 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence 34445689999999999999999999999999999999998876644 234455555544443333332 33
Q ss_pred cEEEEcC-----------------hhH--HHHHHHhCCCCEEEEecccccc
Q 028418 165 RSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~Vy 196 (209)
..++.+. .|+ +++||+.+||+|||++|+++..
T Consensus 155 ~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~ 205 (411)
T KOG1203|consen 155 VIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGT 205 (411)
T ss_pred eeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCc
Confidence 3455441 122 8999999999999999988653
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.8e-11 Score=104.57 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||.+++++|+++|++|+++.|+.++.... .+..++++.+|++|++++.++++ .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999999999999999987654321 12357899999999999988875 38
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 85 D~li~n 90 (322)
T PRK07453 85 DALVCN 90 (322)
T ss_pred cEEEEC
Confidence 999997
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.5e-10 Score=97.29 Aligned_cols=99 Identities=19% Similarity=0.286 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||+|+||++++++|+++|++|.++.|++.... ...+..+.++..|++|++.+.++++ .+|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 34579999999999999999999999999999999875422 1223346789999999998888775 5799
Q ss_pred EEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEeccccc
Q 028418 167 IICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQR 195 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~V 195 (209)
|||++ . +. ++++ +++.+..|||++||...
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 151 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAG 151 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhh
Confidence 99982 0 11 2333 34457889999999754
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.2e-10 Score=100.08 Aligned_cols=103 Identities=15% Similarity=0.131 Sum_probs=80.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~------Gv 164 (209)
.++++|||||+|.||++++++|+++|++|.++.|+.++.... .+.+++++.+|++|++++.++++ ++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 467899999999999999999999999999999987654211 13458899999999999988875 57
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.+||++ + +. ++..+++.+..+||++||.......+
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~ 152 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP 152 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC
Confidence 9999882 0 00 34555667778999999987654433
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.8e-10 Score=96.65 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=58.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h---h---hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---E---SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~---~---~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||+|+||++++++|.++|++|.++.|+.... . . ..+..+.++.+|++|++++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 36799999999999999999999999999999865321 1 1 123458899999999998887764 57
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 82 d~vi~~ 87 (256)
T PRK12745 82 DCLVNN 87 (256)
T ss_pred CEEEEC
Confidence 999998
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-10 Score=104.35 Aligned_cols=104 Identities=12% Similarity=0.200 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++||||||||+||++++++|+++|++|+++.|++++... ..+..+.++.+|++|++++.++++ .
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 345789999999999999999999999999999998765432 123457889999999999988864 6
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|.+||++ + +. ++..+++.+..+||++||...+...+
T Consensus 86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~ 152 (334)
T PRK07109 86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP 152 (334)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC
Confidence 89999982 0 01 34556667778999999988776543
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.1e-11 Score=106.36 Aligned_cols=85 Identities=14% Similarity=0.191 Sum_probs=69.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a------ 171 (209)
|+||||||+|++|++|++.|.++|++|.++.|+ ..|++|++.+.+.++. .|+|||++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence 689999999999999999999999999999765 6689999999999874 69999992
Q ss_pred --------------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --------------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+ .++++|.+.|+ |+||+||..||.+..
T Consensus 66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~ 109 (286)
T PF04321_consen 66 ACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDK 109 (286)
T ss_dssp HHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SST
T ss_pred hhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCc
Confidence 01 27888988886 899999999996653
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.7e-10 Score=96.53 Aligned_cols=102 Identities=16% Similarity=0.261 Sum_probs=76.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h---hhcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
..++||||||+|+||++++++|+++|++|.++.|+.... . ...+..+.++.+|++|++++.++++ ++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467999999999999999999999999999999876321 1 1223457899999999999887664 5899
Q ss_pred EEEcC-------------h-----------hH--HHHHH----HhCC-CCEEEEecccccccCC
Q 028418 167 IICPS-------------E-----------GF--ISNAG----SLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll~AA----~~aG-VkriV~vSS~~Vyg~~ 199 (209)
|||++ . +. +++++ .+.+ -.+||++||...+...
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 147 (248)
T TIGR01832 84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG 147 (248)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC
Confidence 99982 0 00 23333 2344 5799999998776543
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=2e-10 Score=97.28 Aligned_cols=102 Identities=12% Similarity=0.180 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc--hhh---hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME---SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~--a~~---~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
...+++|||||+|+||+.++++|+++|++|.++.|+... ... ..+..++++.+|++|.+.+.++++ .+
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 456799999999999999999999999999999988321 111 123468899999999999988876 67
Q ss_pred cEEEEcC------------h------------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 165 RSIICPS------------E------------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 165 DaVIh~a------------~------------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
|.+||++ . +. ++..+++.+..+||++||...+..
T Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (258)
T PRK06935 93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG 156 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC
Confidence 9999982 0 00 234455667789999999876644
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.6e-10 Score=97.69 Aligned_cols=73 Identities=16% Similarity=0.237 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
.++++|||||+|+||++++++|+++|++|.++.|++.+... ..+..+.++.+|++|++++.++++ .+|.|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 35789999999999999999999999999999887654322 233467899999999998876654 47999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 89 i~~ 91 (255)
T PRK05717 89 VCN 91 (255)
T ss_pred EEC
Confidence 998
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-10 Score=97.65 Aligned_cols=101 Identities=13% Similarity=0.109 Sum_probs=78.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
...++||||||+|+||+.++++|+++|++|.++.|+++.... ..+..+.++.+|++|++.+.++++.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 457899999999999999999999999999999998754322 1234588999999999999888763
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+|.|||++ . ++ +++++.+.+..+||++||.....
T Consensus 89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~ 152 (256)
T PRK06124 89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV 152 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc
Confidence 58999971 0 00 23445557889999999976543
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.3e-10 Score=96.59 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=77.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-------cCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-------~GvDaVIh 169 (209)
...+++|||||+|+||++++++|.++|++|.++.|+.... ....+.++++|++|++.+.+++ ..+|.|||
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 83 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVH 83 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4567999999999999999999999999999999987542 2345789999999999877654 46799999
Q ss_pred cC------h--------------------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 170 PS------E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 170 ~a------~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
++ . +. +++.+++.+..+||++||...+..
T Consensus 84 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 144 (260)
T PRK06523 84 VLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP 144 (260)
T ss_pred CCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC
Confidence 72 0 00 234455667789999999876644
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-10 Score=97.58 Aligned_cols=103 Identities=16% Similarity=0.157 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhcC-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG-------V 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G-------v 164 (209)
..++||||||+|+||++++++|+++|++|.++.|++++... ..+..++++.+|++|++++.++++. +
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999999999999999998765321 1234588999999999999887764 5
Q ss_pred cEEEEcC----h---------------------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS----E---------------------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a----~---------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|+|||++ . +. ++....+.+..+||++||...+....
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~ 152 (253)
T PRK06172 86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP 152 (253)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC
Confidence 9999982 0 00 12234456678999999987765443
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-10 Score=100.56 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..++++|||||+|+||++++++|+++|++|.+..|+.+..... .+..+.++.+|++|++++.++++ .
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4567899999999999999999999999999999987554321 13357889999999999988875 4
Q ss_pred CcEEEEcC-------------h-----------hH--HHHH----HHhCC-CCEEEEecccccccCC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNA----GSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~A----A~~aG-VkriV~vSS~~Vyg~~ 199 (209)
+|.|||++ + +. ++++ +.+.+ -.+||++||...+...
T Consensus 84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~ 150 (275)
T PRK05876 84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN 150 (275)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC
Confidence 69999972 0 11 2333 33444 5799999998766443
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.2e-10 Score=98.78 Aligned_cols=73 Identities=16% Similarity=0.210 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhc------CCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR------GVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~------GvDa 166 (209)
.++++|||||+|+||++++++|+++|++|.+++|++++.... .+.+++++.+|++|++.+.++++ .+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 356899999999999999999999999999999987654322 13468899999999998877654 5799
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 84 lv~~ 87 (263)
T PRK09072 84 LINN 87 (263)
T ss_pred EEEC
Confidence 9998
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.9e-10 Score=97.03 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|.||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.++++ .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 456899999999999999999999999999999987654321 23457889999999999888875 68
Q ss_pred cEEEEcC--------------hh-----------H------HHHHHHhCCCCEEEEecccccc
Q 028418 165 RSIICPS--------------EG-----------F------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a--------------~g-----------~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
|+|||++ +. . ++..+++.+-.+||++||...+
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~ 147 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGH 147 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhh
Confidence 9999982 00 0 2344566777899999997654
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-10 Score=96.81 Aligned_cols=98 Identities=15% Similarity=0.240 Sum_probs=76.8
Q ss_pred EEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhcC---CcEEEEcC---
Q 028418 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG---VRSIICPS--- 171 (209)
Q Consensus 103 LVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~G---vDaVIh~a--- 171 (209)
|||||+|+||++++++|+++|++|+++.|+++..... . +.+++++.+|++|++++.++++. +|.+||.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 6999999999999999999999999999987654321 1 34688999999999999999874 69999982
Q ss_pred -h--------------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 -E--------------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -~--------------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
. +. ++++....+..+||++||.+.+...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~ 132 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSA 132 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCC
Confidence 0 00 34444455678999999988875543
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.5e-10 Score=95.36 Aligned_cols=96 Identities=19% Similarity=0.277 Sum_probs=72.0
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-chh----h--hcCCceEEEEccCCCHHHHHHhhcC-------CcEE
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM----E--SFGTYVESMAGDASNKKFLKTALRG-------VRSI 167 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-~a~----~--~~~~~vevv~GDl~D~~sL~~AL~G-------vDaV 167 (209)
|||||++|+||++++++|+++|++|+++.|+.. ... . ..+..+.++.+|++|++++.+++++ +|.|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 689999999999999999999999999998762 211 1 1123478899999999999888764 5999
Q ss_pred EEcC-------------h-----------hH--HHHHHH----hCCCCEEEEecccc-ccc
Q 028418 168 ICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQRQ-RWH 197 (209)
Q Consensus 168 Ih~a-------------~-----------g~--ll~AA~----~aGVkriV~vSS~~-Vyg 197 (209)
||++ . ++ +++++. +.+.++||++||.+ +++
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g 141 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMG 141 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCC
Confidence 9971 0 01 344443 36778999999964 444
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.5e-10 Score=96.22 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-----hhcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-----~~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++++|||||+|+||++++++|+++|++|++++|++++.. ...+.+++++.+|++|++++.++++ ++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 34579999999999999999999999999999999886531 1124468899999999999988885 57
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 85 d~vi~~ 90 (258)
T PRK08628 85 DGLVNN 90 (258)
T ss_pred CEEEEC
Confidence 999998
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.9e-10 Score=96.80 Aligned_cols=72 Identities=17% Similarity=0.238 Sum_probs=60.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
++++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++++|++|++++.++++ ++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999987543211 13457889999999998888775 579
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
+|||+
T Consensus 82 ~vi~~ 86 (256)
T PRK08643 82 VVVNN 86 (256)
T ss_pred EEEEC
Confidence 99998
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.8e-10 Score=97.34 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++++||||+|+||++++++|+++|++|.++.|+.+..... .+.++.++++|+.|++.+.++++ .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999999999999987543221 13357889999999998887764 68
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 89 d~li~~ 94 (278)
T PRK08277 89 DILING 94 (278)
T ss_pred CEEEEC
Confidence 999997
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.6e-10 Score=96.17 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=75.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|+||++++++|+++|++|.+..|++.+.... .+..+.++.+|++|++++.++++ .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 457899999999999999999999999999999987654321 13357788999999999888764 47
Q ss_pred cEEEEcC-------------h-----------hH--HHH----HHHhCCCCEEEEecccccc
Q 028418 165 RSIICPS-------------E-----------GF--ISN----AGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~--ll~----AA~~aGVkriV~vSS~~Vy 196 (209)
|.|||++ . +. +++ .+++.+..+||++||....
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 149 (254)
T PRK08085 88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE 149 (254)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc
Confidence 9999982 0 10 223 3344677899999997543
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.7e-10 Score=94.38 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=73.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC-Ccchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~-~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||||+||++++++|+++|++|+++.+. ...... ..+..+..+.+|++|.+.+.++++ .+
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999886642 222111 112346778999999999888764 68
Q ss_pred cEEEEcC-h-----------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 165 RSIICPS-E-----------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 165 DaVIh~a-~-----------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
|+|||++ . +. +++.+++.+..+||++||....
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 144 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ 144 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhcc
Confidence 9999982 0 10 3444567788999999997543
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.3e-10 Score=96.59 Aligned_cols=102 Identities=12% Similarity=0.160 Sum_probs=77.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--------CCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--------~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++|||||+|.||++++++|.++|++|+++.|+.+...... +..+.++.+|++|++++.++++
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4679999999999999999999999999999999876543211 2357889999999988766654
Q ss_pred CCcEEEEcC-h-----------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS-E-----------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a-~-----------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|.|||++ . +. ++++ .++.+..+||++||...+...
T Consensus 88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~ 154 (257)
T PRK09242 88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV 154 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC
Confidence 579999982 0 11 3333 345677899999998765543
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.9e-10 Score=94.29 Aligned_cols=99 Identities=17% Similarity=0.168 Sum_probs=73.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC-Ccchhh------hcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~-~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
..+++|||||+|+||++++++|+++|++|.++.++ +..... ..+..+.++.+|++|++++.++++.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999999999876653 332211 1123578899999999999988865
Q ss_pred CcEEEEcC-------------h-----------hH--HHHHHH----hCCCCEEEEecccccc
Q 028418 164 VRSIICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~AA~----~aGVkriV~vSS~~Vy 196 (209)
+|+|||++ . ++ +++++. +.+..+||++||...+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 147 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ 147 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc
Confidence 69999982 0 01 334433 3456799999997554
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.7e-10 Score=96.33 Aligned_cols=100 Identities=15% Similarity=0.193 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
..+++|||||+|+||++++++|+++|++|.++.|+.+.. ......++.++.+|++|++++.++++ .+|.|||
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 357899999999999999999999999999887755432 22222357899999999999988875 5799999
Q ss_pred cC------------------------hhH------HHHHHHhCCCCEEEEeccccccc
Q 028418 170 PS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
++ .+. +++.+++.+..+||++||...++
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~ 143 (255)
T PRK06463 86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIG 143 (255)
T ss_pred CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCC
Confidence 82 011 34445556778999999987664
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.7e-10 Score=93.24 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=60.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h------hhcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~------~~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++|||||+|+||+++++.|+++|++|.++.|+.... . ...+..+.++..|++|++++.++++ +
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999998888755321 1 1123468899999999999998886 6
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|+|||+
T Consensus 84 id~vi~~ 90 (245)
T PRK12937 84 IDVLVNN 90 (245)
T ss_pred CCEEEEC
Confidence 8999998
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.7e-10 Score=96.00 Aligned_cols=99 Identities=15% Similarity=0.163 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcc-hhh----h---cCCceEEEEccCCCHHHHHHhhc-----
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-AME----S---FGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~-a~~----~---~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
...++||||||||+||++++++|+++| ++|.+++|++++ ... . ...+++++.+|+.|++++.++++
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 345689999999999999999999995 999999998875 221 1 12368899999999998665543
Q ss_pred -CCcEEEEcC-----------h-------------h------HHHHHHHhCCCCEEEEeccccc
Q 028418 163 -GVRSIICPS-----------E-------------G------FISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 163 -GvDaVIh~a-----------~-------------g------~ll~AA~~aGVkriV~vSS~~V 195 (209)
++|.+|+++ . + .+++++++.+..+||++||...
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g 149 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAG 149 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhh
Confidence 689998761 0 0 0455677788899999999764
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=5e-10 Score=96.30 Aligned_cols=100 Identities=17% Similarity=0.137 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..++++|||||+|+||++++++|+++|++|.++.|+ +.... ..+.++.++.+|++|++++.++++ .
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 346799999999999999999999999999999998 43321 113457899999999998887765 4
Q ss_pred CcEEEEcC----h---------------------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 164 VRSIICPS----E---------------------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a----~---------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+|.+||++ . +. ++..+++.+ .+||++||...+..
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~ 147 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAA 147 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCC
Confidence 79999982 0 00 233445555 79999999876543
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.4e-10 Score=96.48 Aligned_cols=72 Identities=15% Similarity=0.199 Sum_probs=61.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
.+++|||||+|+||++++++|+++|++|.++.|+.+.... .....++++.+|++|++++.++++ .+|+||
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 85 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF 85 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999999999999999998865432 223458899999999999988876 579999
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
|+
T Consensus 86 ~~ 87 (257)
T PRK07067 86 NN 87 (257)
T ss_pred EC
Confidence 98
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.3e-10 Score=95.37 Aligned_cols=74 Identities=23% Similarity=0.298 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||||.||++++++|+++|++|.++.|++++... ..+..+.++++|++|++++.++++ .+|.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 346799999999999999999999999999999998764332 234468899999999999988775 5699
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 84 lv~~ 87 (261)
T PRK08265 84 LVNL 87 (261)
T ss_pred EEEC
Confidence 9998
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.1e-10 Score=95.85 Aligned_cols=93 Identities=14% Similarity=0.082 Sum_probs=74.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhcC-------CcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRG-------VRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~G-------vDaV 167 (209)
|+++|||||||+|. +++.|.++|++|+++.|+++.+... . ...++++.+|++|++++.+++++ +|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 57999999999886 9999999999999999987654322 1 24578899999999999988753 4677
Q ss_pred EEc--C--hhHHHHHHHhCCCC----EEEEeccc
Q 028418 168 ICP--S--EGFISNAGSLKGVQ----HVILLSQR 193 (209)
Q Consensus 168 Ih~--a--~g~ll~AA~~aGVk----riV~vSS~ 193 (209)
|+. . ...+..+|++.||+ ||||+=..
T Consensus 80 v~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs 113 (177)
T PRK08309 80 VAWIHSSAKDALSVVCRELDGSSETYRLFHVLGS 113 (177)
T ss_pred EEeccccchhhHHHHHHHHccCCCCceEEEEeCC
Confidence 765 2 33489999999999 99998433
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.9e-10 Score=94.68 Aligned_cols=74 Identities=15% Similarity=0.146 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...++||||||+|+||++++++|.++|++|+++.|++++.... ....+.++.+|+++++.+.++++ .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4468999999999999999999999999999999988664321 12357899999999999988876 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.|||+
T Consensus 87 ~d~li~~ 93 (258)
T PRK06949 87 IDILVNN 93 (258)
T ss_pred CCEEEEC
Confidence 7999998
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.9e-10 Score=95.43 Aligned_cols=97 Identities=11% Similarity=0.093 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.+++. .+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 457899999999999999999999999999999887654321 13457889999999999988874 47
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccc
Q 028418 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~ 194 (209)
|+|||++ . +. ++..+++.+..+||++||..
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~ 148 (265)
T PRK07097 89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMM 148 (265)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcc
Confidence 9999982 0 10 23345566788999999964
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.2e-10 Score=93.37 Aligned_cols=103 Identities=13% Similarity=0.097 Sum_probs=74.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++||||||+|+||++++++|+++|++|++.+|+... ... ..+..+.++..|++|++++.++++ ++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA 85 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 4699999999999999999999999999888865422 111 122356788999999998887765 67
Q ss_pred cEEEEcC-h-----------------------hH--HHHHHHhC--CCCEEEEecccccccCCCC
Q 028418 165 RSIICPS-E-----------------------GF--ISNAGSLK--GVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 165 DaVIh~a-~-----------------------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~~ 201 (209)
|+|||++ . +. +++++.+. ..++||++||...+...++
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 150 (252)
T PRK06077 86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYG 150 (252)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCC
Confidence 9999982 0 00 23333321 2368999999887765443
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-10 Score=95.53 Aligned_cols=72 Identities=18% Similarity=0.219 Sum_probs=57.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhh------hcCCceEEEEccCCCHHHHHHhhcC-------C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALRG-------V 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G-------v 164 (209)
++++|||||+|+||++++++|+++|++|+++ .|++++... ..+..+.++.+|++|++++.++++. +
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999875 465543321 1134578899999999999988764 5
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 81 d~vi~~ 86 (247)
T PRK09730 81 AALVNN 86 (247)
T ss_pred CEEEEC
Confidence 799998
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.1e-10 Score=95.47 Aligned_cols=101 Identities=13% Similarity=0.170 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------c-CCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~-~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++|||||+|.||++++++|+++|++|.++.|++++.... . +..+.++.+|++|++++.++++
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999987654321 1 1357789999999999877653
Q ss_pred CCcEEEEcC-h-----------------------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 163 GVRSIICPS-E-----------------------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 GvDaVIh~a-~-----------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+|.|||++ . +. ++..+++.+..+||++||...+..
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 152 (265)
T PRK07062 87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP 152 (265)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC
Confidence 579999982 0 00 234455566789999999776543
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.7e-10 Score=95.55 Aligned_cols=73 Identities=12% Similarity=0.133 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
.++++|||||+|+||++++++|+++|++|+++.|+.+..... . +.+++++++|++|++++.++++ .+|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 457899999999999999999999999999999876543211 1 2357899999999999998886 689
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.|||+
T Consensus 97 ~li~~ 101 (280)
T PLN02253 97 IMVNN 101 (280)
T ss_pred EEEEC
Confidence 99998
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.8e-10 Score=94.97 Aligned_cols=72 Identities=22% Similarity=0.191 Sum_probs=60.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhcCC----cEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRGV----RSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~Gv----DaVIh~ 170 (209)
+.++|||||||+||++++++|+++|++|.+++|++++..+.. ..++.++.+|++|++++.++++.+ |.+||.
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 368999999999999999999999999999999876654322 245789999999999999998764 666665
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.6e-10 Score=94.08 Aligned_cols=99 Identities=18% Similarity=0.218 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hh------hcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~------~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
..+++|||||+|+||++++++|+++|++|.++.|+.++. .. ..+..+.++.+|++|++++.++++.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457999999999999999999999999999999876432 11 1134578899999999998887753
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|.|||++ + ++ ++..+++.+-.+||++||...+
T Consensus 87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 149 (254)
T PRK06114 87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGI 149 (254)
T ss_pred CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhc
Confidence 69999982 0 11 2334456677899999997644
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.2e-10 Score=93.98 Aligned_cols=100 Identities=11% Similarity=0.143 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||+|+||.+++++|+++|++|.++.|+.++.... .+..+.+++.|+.|.+.+.++++ .
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3457899999999999999999999999999999987543221 12346789999999998887765 4
Q ss_pred CcEEEEcC-h------------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS-E------------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-~------------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|.|||++ . +. +++.+++.+..+||++||....
T Consensus 86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 149 (252)
T PRK07035 86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGV 149 (252)
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhc
Confidence 79999872 0 11 2334466778999999997544
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.13 E-value=5e-10 Score=93.80 Aligned_cols=71 Identities=21% Similarity=0.227 Sum_probs=59.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
+++|||||+|+||.+++++|+++|++|.++.|+...... ..+.++.++.+|++|++++.++++ .+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999998654321 123457899999999999888764 5799
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 81 vi~~ 84 (254)
T TIGR02415 81 MVNN 84 (254)
T ss_pred EEEC
Confidence 9998
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=9.3e-10 Score=93.19 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-chhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..++++|||||+|+||++++++|+++|++|++++|+.. .... ..+..++++.+|++|++++.++++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34668999999999999999999999999999887532 2211 123458899999999999988875
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.|||+
T Consensus 87 ~iD~vi~~ 94 (258)
T PRK09134 87 PITLLVNN 94 (258)
T ss_pred CCCEEEEC
Confidence 47999998
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.6e-10 Score=107.25 Aligned_cols=102 Identities=13% Similarity=0.148 Sum_probs=81.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
++++|||||||+||++++++|+++|++|.+++|+++..... .+..+.++.+|++|++++.++++ ++|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 56899999999999999999999999999999987654321 13458899999999999998876 689
Q ss_pred EEEEcC-h--------------h-----------H------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS-E--------------G-----------F------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a-~--------------g-----------~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.|||++ . . . ++..+++.+..+||++||.+++...+
T Consensus 451 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 517 (657)
T PRK07201 451 YLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP 517 (657)
T ss_pred EEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC
Confidence 999972 0 0 0 23344567889999999998876544
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.9e-10 Score=95.02 Aligned_cols=75 Identities=12% Similarity=0.161 Sum_probs=61.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
....+++|||||+|+||++++++|+++|++|+++.|+++..... .+.++.++.+|++|++++.++++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG 85 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 34567999999999999999999999999999999987543211 12356789999999999988775
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|.|||+
T Consensus 86 ~iD~vi~~ 93 (264)
T PRK07576 86 PIDVLVSG 93 (264)
T ss_pred CCCEEEEC
Confidence 46999987
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.6e-10 Score=85.76 Aligned_cols=96 Identities=21% Similarity=0.280 Sum_probs=73.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh---------hcCCceEEEEccCCCHHHHHHhhcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRG------ 163 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~---------~~~~~vevv~GDl~D~~sL~~AL~G------ 163 (209)
++++||||+|+||.+++++|+++|+ .|.++.|++.+... ..+..+.++..|+++++.+.+++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999996 57777887654321 1234577899999999988877653
Q ss_pred -CcEEEEcC-------------h-----------hH--HHHHHHhCCCCEEEEeccccc
Q 028418 164 -VRSIICPS-------------E-----------GF--ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 164 -vDaVIh~a-------------~-----------g~--ll~AA~~aGVkriV~vSS~~V 195 (209)
+|.|||++ . ++ +++++++.+.+++|++||...
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~ 139 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAG 139 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHH
Confidence 59999972 0 11 567777788899999999654
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.7e-10 Score=93.49 Aligned_cols=65 Identities=15% Similarity=0.248 Sum_probs=53.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hh---hhcCCceEEEEccCCCHHHHHHhhcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM---ESFGTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~---~~~~~~vevv~GDl~D~~sL~~AL~G 163 (209)
++++|||||+|+||+.++++|+++|++|.++.|++.+ .. ...+.+++++.+|++|++.+.++++.
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 69 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNE 69 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHH
Confidence 4689999999999999999999999999999998732 21 11234688999999999999888753
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=9.6e-10 Score=91.60 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=59.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhh-------cCCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL-------~GvDaV 167 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.+.... ..+..+.++++|++|.+.+.+++ ..+|+|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 45799999999999999999999999999999998654322 23445788999999998776554 368999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 85 i~~ 87 (249)
T PRK06500 85 FIN 87 (249)
T ss_pred EEC
Confidence 998
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-09 Score=92.45 Aligned_cols=72 Identities=15% Similarity=0.258 Sum_probs=59.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cC-CceEEEEccCCCHHHHHHhhc-------C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~-~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++||||||+|+||+++++.|.++|++|+++.|+....... .+ ..++++.+|++|++.+..+++ .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35899999999999999999999999999999987543211 11 358899999999998887764 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|+|||+
T Consensus 82 id~vv~~ 88 (259)
T PRK12384 82 VDLLVYN 88 (259)
T ss_pred CCEEEEC
Confidence 7999998
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-09 Score=91.86 Aligned_cols=104 Identities=8% Similarity=0.122 Sum_probs=77.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...++|+||||+|+||++++++|+++|++ |.++.|++++... ..+..+.++.+|++|++++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 34578999999999999999999999999 9999998654331 123457789999999999888765
Q ss_pred CCcEEEEcC-h-----------------------hH--HHHHH----HhCC-CCEEEEecccccccCCC
Q 028418 163 GVRSIICPS-E-----------------------GF--ISNAG----SLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a-~-----------------------g~--ll~AA----~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
++|.|||++ . +. +++++ .+.+ -.+||++||...++..+
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~ 152 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP 152 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC
Confidence 579999982 0 00 23333 2332 46899999988776543
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.1e-09 Score=90.86 Aligned_cols=97 Identities=13% Similarity=0.140 Sum_probs=73.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH-HHHHHhhcCCcEEEEcC----h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICPS----E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~-~sL~~AL~GvDaVIh~a----~ 172 (209)
..+++|||||+|+||++++++|+++|++|.++.|++... ...++.++.+|++|+ +.+.+.+..+|+|||++ .
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~ 80 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDD 80 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---cCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCC
Confidence 357899999999999999999999999999999986542 134578999999998 55555566889999982 0
Q ss_pred ---------------------hH--HHHH----HHhCCCCEEEEeccccccc
Q 028418 173 ---------------------GF--ISNA----GSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 173 ---------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg 197 (209)
++ ++++ .++.+-.+||++||...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 132 (235)
T PRK06550 81 YKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV 132 (235)
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc
Confidence 00 2333 3345567999999976543
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.1e-10 Score=94.11 Aligned_cols=73 Identities=12% Similarity=0.141 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hh-------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME-------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~-------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..++||||||+|+||++++++|+++|++|.++.|+.... .. ..+..++++.+|++|.+++.++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999999999999864321 11 112357899999999999998886
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.|||+
T Consensus 85 ~~d~vi~~ 92 (249)
T PRK09135 85 RLDALVNN 92 (249)
T ss_pred CCCEEEEC
Confidence 47999998
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.3e-10 Score=102.99 Aligned_cols=92 Identities=20% Similarity=0.182 Sum_probs=72.2
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-CCcEEEEcC---------
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPS--------- 171 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-GvDaVIh~a--------- 171 (209)
|+|||||||||++|+.+|...||+|.+++|++.++...+..+++ .-+.+.++.. +||+||+++
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rrW 73 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPIAERRW 73 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCccccccC
Confidence 68999999999999999999999999999999988776665443 2234555665 899999982
Q ss_pred -------------hhH--HHHHH--HhCCCCEEEEecccccccCCC
Q 028418 172 -------------EGF--ISNAG--SLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -------------~g~--ll~AA--~~aGVkriV~vSS~~Vyg~~~ 200 (209)
..| ++++. .+.+.+-+|--|.++.||++.
T Consensus 74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~ 119 (297)
T COG1090 74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSG 119 (297)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCC
Confidence 011 45543 467888888888899999873
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.6e-10 Score=102.92 Aligned_cols=104 Identities=16% Similarity=0.213 Sum_probs=78.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|+||++++++|.++|++|+++.|+.++... ..+..++++.+|++|++++.++++ .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 35689999999999999999999999999999998765432 123467899999999999988875 47
Q ss_pred cEEEEcC----h--------------------hH------HHHHHHhCCC-CEEEEecccccccCCCC
Q 028418 165 RSIICPS----E--------------------GF------ISNAGSLKGV-QHVILLSQRQRWHSSSN 201 (209)
Q Consensus 165 DaVIh~a----~--------------------g~------ll~AA~~aGV-kriV~vSS~~Vyg~~~~ 201 (209)
|.|||++ . |. ++..+++.+- .+||++||...+...++
T Consensus 394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 461 (582)
T PRK05855 394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS 461 (582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC
Confidence 9999982 0 11 1222344443 69999999988765543
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.7e-10 Score=93.54 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
.+++||||||+|+||++++++|+++|++|.++.|++.+..... ....+++.+|++|++.+.++++ .+|+|||
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4579999999999999999999999999999999876543211 1123688999999999988876 5799999
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 86 ~ 86 (255)
T PRK06057 86 N 86 (255)
T ss_pred C
Confidence 7
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-09 Score=95.53 Aligned_cols=103 Identities=19% Similarity=0.288 Sum_probs=76.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h---h---hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---E---SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~---~---~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.... . . ..+..+.++.+|++|.+.+.++++ .
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999999999876421 1 1 113457789999999999988775 5
Q ss_pred CcEEEEcC----h---------------------hH--HHHHHHh--CCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS----E---------------------GF--ISNAGSL--KGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a----~---------------------g~--ll~AA~~--aGVkriV~vSS~~Vyg~~~ 200 (209)
+|+|||++ . ++ +++++.. ..-.+||++||...+....
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~ 190 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE 190 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC
Confidence 79999982 0 01 3444432 1236899999988775543
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1e-09 Score=92.73 Aligned_cols=98 Identities=13% Similarity=0.185 Sum_probs=74.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hh--cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~--~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
.++++|||||+|+||++++++|+++|++|+++.|+..... .. .+..+.++.+|++|++++.++++ .+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4579999999999999999999999999999998764211 11 13457889999999999988876 579
Q ss_pred EEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEeccccc
Q 028418 166 SIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQR 195 (209)
Q Consensus 166 aVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~V 195 (209)
.|||++ . +. ++++ +++.+..+||++||...
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 144 (263)
T PRK08226 85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTG 144 (263)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence 999972 0 11 2333 33456789999998654
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.5e-09 Score=94.96 Aligned_cols=105 Identities=15% Similarity=0.228 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch--h------hhcCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--M------ESFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a--~------~~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
..++++|||||+|+||++++++|+++|++|.+..|+.+.. . ...+..+.++.+|++|++++.++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 3457999999999999999999999999998877654321 1 1123457889999999998887764
Q ss_pred -CCcEEEEcC-----h--------------------hH--HHHHHHhC--CCCEEEEecccccccCCCC
Q 028418 163 -GVRSIICPS-----E--------------------GF--ISNAGSLK--GVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 -GvDaVIh~a-----~--------------------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~~ 201 (209)
++|.|||++ . ++ +++++... .-.+||++||...+....+
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 201 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT 201 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC
Confidence 689999982 0 11 34554321 2259999999988765443
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=9e-10 Score=93.35 Aligned_cols=72 Identities=25% Similarity=0.200 Sum_probs=58.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-chhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||+|+||++++++|+++|++|.++.|+.. .... ..+..++++.+|++|++++.++++ .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999998876443 2211 124568899999999999887775 57
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 82 d~li~~ 87 (256)
T PRK12743 82 DVLVNN 87 (256)
T ss_pred CEEEEC
Confidence 999998
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.1e-09 Score=92.95 Aligned_cols=73 Identities=19% Similarity=0.330 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
..+++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++++|++|++++.++++ .+|.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 45799999999999999999999999999999998765432 223457889999999998888764 57999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 85 i~~ 87 (263)
T PRK06200 85 VGN 87 (263)
T ss_pred EEC
Confidence 998
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.5e-09 Score=91.14 Aligned_cols=101 Identities=12% Similarity=0.083 Sum_probs=73.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCC--CHHHHHHh------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDAS--NKKFLKTA------ 160 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~--D~~sL~~A------ 160 (209)
-.+.++||||||+|+||.+++++|+++|++|.+++|++++.... ....+.++.+|++ +.+.+.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 44677999999999999999999999999999999987653221 1234678888886 55544443
Q ss_pred -hcCCcEEEEcC--------------h-----------hH--HHHH----HHhCCCCEEEEecccccc
Q 028418 161 -LRGVRSIICPS--------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 161 -L~GvDaVIh~a--------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vy 196 (209)
+..+|.|||++ . ++ ++++ +++.+.++||++||....
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~ 156 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR 156 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc
Confidence 34689999972 0 11 2333 356788999999997654
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.2e-09 Score=92.35 Aligned_cols=101 Identities=11% Similarity=0.140 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...++||||||+|+||++++++|.++|++|+++.|+....... .+.++.++..|++|++++.++++ .
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3468999999999999999999999999999999876543211 13457889999999999887764 5
Q ss_pred CcEEEEcC------------h-----------hH--HHHHH----HhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ . +. +++++ .+.+..+||++||.....
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 151 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN 151 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC
Confidence 79999982 0 11 33443 244557999999976543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.5e-09 Score=90.57 Aligned_cols=72 Identities=14% Similarity=0.316 Sum_probs=58.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchh---hhcCCceEEEEccCCCHHHHHHhhcC--------CcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM---ESFGTYVESMAGDASNKKFLKTALRG--------VRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~---~~~~~~vevv~GDl~D~~sL~~AL~G--------vDa 166 (209)
.++||||||+|+||+++++.|+++|++|..+.|+. .+.. ...+..+.++.+|++|++++.++++. +|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~ 84 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT 84 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 46899999999999999999999999998877643 3222 11234688899999999999888753 899
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 85 li~~ 88 (253)
T PRK08642 85 VVNN 88 (253)
T ss_pred EEEC
Confidence 9997
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.7e-09 Score=97.39 Aligned_cols=103 Identities=16% Similarity=0.177 Sum_probs=79.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhh-------cC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RG 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL-------~G 163 (209)
...+++|||||||.||++++++|+++|++|.++.|++++... ..+..+.++..|++|++++.+++ ..
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 345799999999999999999999999999999998865432 12345778899999999999887 36
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|.+||++ + ++ ++...++.+-.+||++||...+...
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~ 150 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ 150 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC
Confidence 89999982 0 11 2233455666799999997765444
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.4e-09 Score=91.87 Aligned_cols=73 Identities=18% Similarity=0.295 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|.||++++++|+++|++|.++.|+.++.... .+..+.++.+|++|++++.++++ .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999987654321 13457889999999999888775 78
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.+||+
T Consensus 88 d~lv~~ 93 (253)
T PRK05867 88 DIAVCN 93 (253)
T ss_pred CEEEEC
Confidence 999998
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.5e-09 Score=90.80 Aligned_cols=71 Identities=13% Similarity=0.200 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
...+++|||||+|+||+++++.|+++|++|.++.|++.... ...+.++.+|++|++.+.++++ .+|.|||
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 44679999999999999999999999999999998876543 2357889999999999888765 5799999
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 84 ~ 84 (266)
T PRK06171 84 N 84 (266)
T ss_pred C
Confidence 7
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.7e-09 Score=90.17 Aligned_cols=72 Identities=17% Similarity=0.249 Sum_probs=59.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhc-------CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (209)
.+++|||||+|+||++++++|+++|++|.++.|++++.... ...+++++.+|++|++++.++++ ++|.+||+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 46899999999999999999999999999999987643221 12247889999999998877653 47999998
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.5e-09 Score=90.95 Aligned_cols=74 Identities=14% Similarity=0.192 Sum_probs=60.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h---hhcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
...+++|||||++.||+.++++|+++|++|.++.|+.... . ...+.++.++.+|++|++++.++++ .+|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3467999999999999999999999999999998865321 1 1224567889999999999988875 579
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
++||+
T Consensus 86 ~lv~~ 90 (251)
T PRK12481 86 ILINN 90 (251)
T ss_pred EEEEC
Confidence 99998
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.4e-09 Score=92.20 Aligned_cols=104 Identities=21% Similarity=0.329 Sum_probs=74.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc--chhh------hcCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAME------SFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~--~a~~------~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...+++|||||+|+||++++++|+++|++|.+..|+.. .... ..+..+.++.+|++|++++.++++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 34468999999999999999999999999998876542 1111 123457789999999998877654
Q ss_pred -CCcEEEEcC-h------------------------hH--HHHHHHh---CCCCEEEEecccccccCCCC
Q 028418 163 -GVRSIICPS-E------------------------GF--ISNAGSL---KGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 -GvDaVIh~a-~------------------------g~--ll~AA~~---aGVkriV~vSS~~Vyg~~~~ 201 (209)
++|++||++ . ++ +++++.. .+ .+||++||...+....+
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~~~~~~~~ 195 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQAYQPSPH 195 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCchhccCCCC
Confidence 579999872 0 11 3444432 23 68999999887765443
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.9e-09 Score=91.57 Aligned_cols=71 Identities=25% Similarity=0.315 Sum_probs=59.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
|++|||||+|.||+.++++|+++|++|.++.|++++.... . ...+.++.+|++|++++.++++ .+|+|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5799999999999999999999999999999987653221 1 1257889999999999888774 68999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 81 i~n 83 (259)
T PRK08340 81 VWN 83 (259)
T ss_pred EEC
Confidence 987
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.6e-09 Score=95.94 Aligned_cols=75 Identities=12% Similarity=0.094 Sum_probs=62.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------c-CCceEEEEccCCCHHHHHHhhc-----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~-~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
...+++++|||||++||.+++++|+++|++|+++.|+.++.... . +..++++.+|+.|+++++++++
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 34568999999999999999999999999999999987654321 1 2357899999999999987764
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
.+|.+||.
T Consensus 91 ~~~iD~li~n 100 (313)
T PRK05854 91 GRPIHLLINN 100 (313)
T ss_pred CCCccEEEEC
Confidence 47999998
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.2e-09 Score=91.23 Aligned_cols=73 Identities=25% Similarity=0.347 Sum_probs=61.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.+..... .+..+.++.+|++|.+++.++++ .+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 467999999999999999999999999999999987654322 23457889999999998887775 57999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 84 i~~ 86 (262)
T TIGR03325 84 IPN 86 (262)
T ss_pred EEC
Confidence 998
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.4e-09 Score=106.42 Aligned_cols=101 Identities=17% Similarity=0.298 Sum_probs=78.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
.++++|||||+|+||++++++|+++|++|++++|+++..... +. ..+.++.+|++|++++.++++ ++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 457999999999999999999999999999999988654321 22 268899999999999988775 789
Q ss_pred EEEEcC----h--------------------hH--HHH----HHHhCCC-CEEEEecccccccC
Q 028418 166 SIICPS----E--------------------GF--ISN----AGSLKGV-QHVILLSQRQRWHS 198 (209)
Q Consensus 166 aVIh~a----~--------------------g~--ll~----AA~~aGV-kriV~vSS~~Vyg~ 198 (209)
.|||++ . ++ +++ ..++.+. .+||++||..++..
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~ 564 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP 564 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC
Confidence 999982 0 11 333 3345565 79999999766543
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.7e-09 Score=90.01 Aligned_cols=71 Identities=17% Similarity=0.257 Sum_probs=59.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
+++|||||+|.||+++++.|+++|++|.++.|+....... .+..+.++.+|++|++.+.++++ .+|.
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 6899999999999999999999999999999987644321 13468899999999999888764 5799
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 82 lI~~ 85 (252)
T PRK07677 82 LINN 85 (252)
T ss_pred EEEC
Confidence 9998
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.1e-09 Score=89.66 Aligned_cols=72 Identities=13% Similarity=0.134 Sum_probs=57.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||||+||++++++|+++|+.|+...|+. +.... ..+..+.++.+|++|++++.++++ .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 45899999999999999999999999988776433 22211 123457789999999999998886 67
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 82 d~li~~ 87 (248)
T PRK06123 82 DALVNN 87 (248)
T ss_pred CEEEEC
Confidence 999998
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.8e-09 Score=92.84 Aligned_cols=103 Identities=18% Similarity=0.214 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a--- 171 (209)
.++..+|.||||-.|+-+++.+++++ -.|.++.|..-.. ......+-.+.-|+..-+.+..+.+|+|+.||+ +
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d-~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTR 95 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD-PATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTR 95 (238)
T ss_pred hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC-ccccceeeeEEechHHHHHHHhhhcCCceEEEeecccc
Confidence 46689999999999999999999988 4899999875322 223455777888999999999999999999998 1
Q ss_pred -----hhH----------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 -----EGF----------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 -----~g~----------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+|+ +.++|++.|+++||++||.++..++.-
T Consensus 96 gkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrF 140 (238)
T KOG4039|consen 96 GKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRF 140 (238)
T ss_pred cccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccce
Confidence 222 567889999999999999999877654
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.7e-09 Score=91.83 Aligned_cols=74 Identities=16% Similarity=0.274 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcC--CceEEEEccCCCHHHHHHhhc-------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~--~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++++|||||+|.||+++++.|.++|++|.++.|+.++... ..+ ..+..+.+|++|++++.++++ .+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 456799999999999999999999999999999998865432 122 234556799999999887764 57
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 87 d~vI~n 92 (296)
T PRK05872 87 DVVVAN 92 (296)
T ss_pred CEEEEC
Confidence 999998
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.1e-09 Score=89.16 Aligned_cols=101 Identities=24% Similarity=0.159 Sum_probs=74.0
Q ss_pred CCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCc-----------ch----h--hhcCCceEEEEccCCCHHHHHH
Q 028418 99 RDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR-----------NA----M--ESFGTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 99 ~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~-----------~a----~--~~~~~~vevv~GDl~D~~sL~~ 159 (209)
+++|||||||| .||.+++++|+++|++|.++.|++. .. . ...+..++++..|++|++++..
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 84 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNR 84 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 46899999996 6999999999999999999998721 11 0 1123458899999999999877
Q ss_pred hhc-------CCcEEEEcC-------------h-----------hH--HHHHHH----hCCCCEEEEecccccccCC
Q 028418 160 ALR-------GVRSIICPS-------------E-----------GF--ISNAGS----LKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 160 AL~-------GvDaVIh~a-------------~-----------g~--ll~AA~----~aGVkriV~vSS~~Vyg~~ 199 (209)
+++ .+|+|||++ . ++ +++++. ..+..+||++||...+...
T Consensus 85 ~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~ 161 (256)
T PRK12748 85 VFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM 161 (256)
T ss_pred HHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence 764 479999982 0 11 333432 3355799999998776544
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.1e-09 Score=88.18 Aligned_cols=72 Identities=19% Similarity=0.238 Sum_probs=57.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe-CCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR-~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
+++||||||+|+||+.+++.|+++|++|.++++ ++++... ..+.++.++.+|++|++++.++++ .+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 358999999999999999999999999987764 4433221 123468899999999998887664 58
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 82 d~li~~ 87 (248)
T PRK06947 82 DALVNN 87 (248)
T ss_pred CEEEEC
Confidence 999998
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.8e-09 Score=88.48 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------------hhcCCceEEEEccCCCHHHHHHhhc--
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR-- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------------~~~~~~vevv~GDl~D~~sL~~AL~-- 162 (209)
.++++|||||+|+||++++++|+++|++|.++.|+..+.. ...+..+.++.+|++|++.+.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 3468999999999999999999999999999999764311 1123457889999999999988775
Q ss_pred -----CCcEEEEc
Q 028418 163 -----GVRSIICP 170 (209)
Q Consensus 163 -----GvDaVIh~ 170 (209)
.+|.|||+
T Consensus 85 ~~~~g~id~li~~ 97 (273)
T PRK08278 85 VERFGGIDICVNN 97 (273)
T ss_pred HHHhCCCCEEEEC
Confidence 67999998
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.6e-09 Score=87.72 Aligned_cols=73 Identities=14% Similarity=0.241 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhhh-cCCceEEEEccCCCHHHHHHhhc---CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES-FGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~~-~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~ 170 (209)
.+++||||||+|+||++++++|+++|++|.++.|+. +..... ...+++++.+|++|++.+.++++ .+|+|||+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEEC
Confidence 457999999999999999999999999998887643 332221 11236788999999998888775 47999998
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.7e-09 Score=89.77 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=61.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh---c--CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---R--GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL---~--GvDaVIh~ 170 (209)
++++|||||+|+||++++++|+++|++|++++|++++.......+++++.+|++|++.+.+++ . .+|.|||+
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ 77 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYV 77 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEEC
Confidence 468999999999999999999999999999999887665444445788999999999998864 3 47999997
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.1e-09 Score=88.24 Aligned_cols=74 Identities=12% Similarity=0.223 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh-------hcCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...+++|||||+++||++++++|+++|++|.++.|+. +.... ..+..+.++.+|++|++++.++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4467999999999999999999999999998876543 32211 123457899999999998887775
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
.+|++||+
T Consensus 86 g~id~lv~n 94 (260)
T PRK08416 86 DRVDFFISN 94 (260)
T ss_pred CCccEEEEC
Confidence 47999986
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.5e-09 Score=89.48 Aligned_cols=71 Identities=18% Similarity=0.193 Sum_probs=56.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCC-ceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT-YVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~-~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
++++||||||+||++++++|.++|++|.++.|++++.... .+. .+.++.+|++|++++.++++ ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999999999987553221 112 24567899999998876654 579
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
+|||+
T Consensus 81 ~lv~~ 85 (272)
T PRK07832 81 VVMNI 85 (272)
T ss_pred EEEEC
Confidence 99998
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.97 E-value=8.9e-09 Score=87.31 Aligned_cols=73 Identities=16% Similarity=0.188 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch--hh--hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--ME--SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a--~~--~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
.++++|||||+|.||++++++|.++|++|.++.|+.... .. ..+..+.++++|++|++++.++++ .+|.
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 457999999999999999999999999999887654221 11 123457889999999999988875 5799
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
+||+
T Consensus 89 li~~ 92 (253)
T PRK08993 89 LVNN 92 (253)
T ss_pred EEEC
Confidence 9998
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.9e-09 Score=87.26 Aligned_cols=69 Identities=20% Similarity=0.215 Sum_probs=55.5
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhh------hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME------SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
||||||+|+||.+++++|+++|++|.++.|.... ... ..+.++.++.+|++|++++.++++ .+|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999998875432 211 123458899999999999887765 46889
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 81 i~~ 83 (239)
T TIGR01831 81 VLN 83 (239)
T ss_pred EEC
Confidence 886
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.3e-08 Score=86.34 Aligned_cols=74 Identities=12% Similarity=0.225 Sum_probs=59.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h----h--hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M----E--SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~----~--~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...+++|||||+|.||++++++|+++|++|.++.|+..+. . . ..+..+.++..|++|++++.++++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3467999999999999999999999999999888854321 1 1 123457789999999999887764
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|++||+
T Consensus 85 ~id~lv~~ 92 (261)
T PRK08936 85 TLDVMINN 92 (261)
T ss_pred CCCEEEEC
Confidence 57999998
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=7e-09 Score=92.58 Aligned_cols=105 Identities=15% Similarity=0.176 Sum_probs=83.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...++++||||||+.||..++++|.++|++|..+.|+.++...+ .+-.++++..|++|++.+.+..+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 45677999999999999999999999999999999999865422 23447899999999998887664
Q ss_pred -CCcEEEEcC-h---h--------------------------HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 163 -GVRSIICPS-E---G--------------------------FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 -GvDaVIh~a-~---g--------------------------~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|.+|.++ . + .++.-+.+.+-.+||.++|...+-..+
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p 151 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTP 151 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCc
Confidence 589999872 0 0 034556778888999999987765543
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=9.8e-09 Score=86.47 Aligned_cols=102 Identities=17% Similarity=0.123 Sum_probs=70.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchhh------hcCCceEEEEccCCCHHHHHHhhc---------
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR--------- 162 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~--------- 162 (209)
++++|||||+|+||++++++|.++|++|.+.. |+.+.... ..+..+..+..|++|.+.+..+++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR 83 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence 57899999999999999999999999998875 34333221 113346788999999887665432
Q ss_pred ----CCcEEEEcC-------------h-----------hH--HHHHHHhC--CCCEEEEecccccccCCC
Q 028418 163 ----GVRSIICPS-------------E-----------GF--ISNAGSLK--GVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 ----GvDaVIh~a-------------~-----------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~ 200 (209)
.+|.|||++ + ++ +++++... .-.+||++||...+...+
T Consensus 84 ~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~ 153 (252)
T PRK12747 84 TGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP 153 (252)
T ss_pred cCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC
Confidence 589999982 0 11 23333221 225999999987765443
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.8e-09 Score=102.55 Aligned_cols=73 Identities=22% Similarity=0.301 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cC-CceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~-~~vevv~GDl~D~~sL~~AL~------- 162 (209)
.++++|||||+|+||++++++|+++|++|+++.|+.+..... .+ ..+..+.+|++|++++.++++
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 357899999999999999999999999999999987654321 11 246789999999999998886
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|.|||+
T Consensus 493 ~iDilV~n 500 (676)
T TIGR02632 493 GVDIVVNN 500 (676)
T ss_pred CCcEEEEC
Confidence 78999998
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.2e-09 Score=88.33 Aligned_cols=72 Identities=13% Similarity=0.119 Sum_probs=60.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhc-----CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-----GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~-----GvDaVIh~ 170 (209)
+++++||||+|+||++++++|+++|++|.++.|++....... ..++.++.+|++|+++++++++ ++|+|||+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 468999999999999999999999999999999886543211 1357788999999998888776 58999998
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=9.1e-09 Score=85.51 Aligned_cols=73 Identities=15% Similarity=0.305 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||+++++.|+++|++|.++.|++.+... ..+..+.++..|++|++++.++++ .+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46799999999999999999999999999999998754321 123457889999999998877665 36
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 84 d~vi~~ 89 (253)
T PRK08217 84 NGLINN 89 (253)
T ss_pred CEEEEC
Confidence 999997
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.6e-08 Score=84.52 Aligned_cols=74 Identities=11% Similarity=0.087 Sum_probs=56.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCC--HHHHHHhh------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASN--KKFLKTAL------ 161 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D--~~sL~~AL------ 161 (209)
..++++|||||+|+||++++++|+++|++|.++.|++.+.... ....+.++..|+.| .+.+.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999988654321 12246678899976 33444332
Q ss_pred --cCCcEEEEc
Q 028418 162 --RGVRSIICP 170 (209)
Q Consensus 162 --~GvDaVIh~ 170 (209)
..+|.|||+
T Consensus 84 ~~~~id~vi~~ 94 (239)
T PRK08703 84 TQGKLDGIVHC 94 (239)
T ss_pred hCCCCCEEEEe
Confidence 467999998
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.9e-09 Score=94.92 Aligned_cols=84 Identities=14% Similarity=0.230 Sum_probs=71.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCC--cEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~Gv--DaVIh~a------ 171 (209)
|+|||||++|.+|+.|+++|. .+++|.++.|.. .|++|++.+.+.++.. |+|||++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD 64 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD 64 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence 459999999999999999988 789999998754 7899999999999865 9999992
Q ss_pred --------------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --------------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+ .++++|.+.|.+ +||+||-.|+.+..
T Consensus 65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~-lVhiSTDyVFDG~~ 108 (281)
T COG1091 65 KAESEPELAFAVNATGAENLARAAAEVGAR-LVHISTDYVFDGEK 108 (281)
T ss_pred cccCCHHHHHHhHHHHHHHHHHHHHHhCCe-EEEeecceEecCCC
Confidence 01 278899999965 99999998876554
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.5e-08 Score=89.81 Aligned_cols=72 Identities=14% Similarity=0.191 Sum_probs=59.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++||||||+.||.+++++|+++| ++|.++.|+.++.... .+..++++.+|++|++++.++++ ++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999 9999999987654321 12347788999999999887763 58
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.+||.
T Consensus 83 D~lI~n 88 (314)
T TIGR01289 83 DALVCN 88 (314)
T ss_pred CEEEEC
Confidence 999987
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.7e-09 Score=88.57 Aligned_cols=73 Identities=8% Similarity=0.166 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..++||||||+|+||+++++.|+++|++|.+++|++++.... . ..+++++.+|++|++.+.++++ ++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 357999999999999999999999999999999988654322 1 1257899999999999887764 468
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.+||+
T Consensus 84 ~ii~~ 88 (238)
T PRK05786 84 GLVVT 88 (238)
T ss_pred EEEEc
Confidence 89887
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.9e-08 Score=85.24 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=61.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc---CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~---GvDaV 167 (209)
..+++|||||+|.||++++++|+++|++|.++.|++++.... .+.++.++.+|++|++++.++++ .+|.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 357999999999999999999999999999999987654321 13457889999999999888765 58999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 86 v~~ 88 (259)
T PRK06125 86 VNN 88 (259)
T ss_pred EEC
Confidence 998
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.4e-08 Score=84.43 Aligned_cols=69 Identities=16% Similarity=0.221 Sum_probs=53.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh---hcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA---LRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A---L~GvDaVIh~ 170 (209)
|+++||||+|+||++++++|++++ +.|.+..|+.... .....+.++++|++|++++.++ +.++|+|||+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~ 74 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC 74 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 589999999999999999999985 5555555654332 2234678899999999987664 4588999998
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.7e-08 Score=94.12 Aligned_cols=75 Identities=19% Similarity=0.292 Sum_probs=62.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
....+++|||||+|.||++++++|+++|++|.++.|++++... ..+..+..+.+|++|++++.++++ .+|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4467899999999999999999999999999999998765432 234456778999999999888775 479
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.|||+
T Consensus 346 ~li~n 350 (520)
T PRK06484 346 VLVNN 350 (520)
T ss_pred EEEEC
Confidence 99997
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.8e-08 Score=88.82 Aligned_cols=74 Identities=16% Similarity=0.210 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-chhh------hcCCceEEEEccCCCHHHHHHhhc------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME------SFGTYVESMAGDASNKKFLKTALR------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-~a~~------~~~~~vevv~GDl~D~~sL~~AL~------G 163 (209)
...+++|||||+|+||++++++|+++|++|++..|+.. .... ..+..+.++.+|++|++.+.++++ .
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 34679999999999999999999999999999887542 2211 124467899999999998888774 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.|||+
T Consensus 90 iD~li~n 96 (306)
T PRK07792 90 LDIVVNN 96 (306)
T ss_pred CCEEEEC
Confidence 8999998
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.8e-08 Score=79.32 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=74.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeC--Ccchh------hhcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD--KRNAM------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~--~~~a~------~~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
+++|||||++.||+.++++|+++| +.|.++.|+ .+... ...+..+++++.|++++++++++++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 479999999999999999999995 567777777 22221 1124678999999999998888874 5
Q ss_pred CcEEEEcC-------------h-----------hH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+|.+||++ + +. +.+++...+-.+||++||.......++
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 144 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPG 144 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTT
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCC
Confidence 79999982 0 00 344444466899999999876655543
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.8e-08 Score=84.31 Aligned_cols=73 Identities=19% Similarity=0.249 Sum_probs=59.9
Q ss_pred CCCeEEEEcCCC-HHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cC-CceEEEEccCCCHHHHHHhhc------
Q 028418 98 ARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 98 ~~~~ILVTGATG-fIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~-~~vevv~GDl~D~~sL~~AL~------ 162 (209)
..+++|||||+| .||+.+++.|+++|++|.+..|+.++.... ++ ..+.++++|++|++.+.++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 357999999998 699999999999999999999877543211 22 357889999999999888775
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
.+|+|||+
T Consensus 96 g~id~li~~ 104 (262)
T PRK07831 96 GRLDVLVNN 104 (262)
T ss_pred CCCCEEEEC
Confidence 57999998
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.7e-09 Score=87.78 Aligned_cols=71 Identities=18% Similarity=0.247 Sum_probs=59.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhc----CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR----GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~----GvDaVIh~ 170 (209)
|++|||||+|.||++++++|.++|++|.++.|+.++..... ..+++++++|++|++++.++++ .+|.+||+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 47999999999999999999999999999999876653221 1246789999999999988875 58999986
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.3e-08 Score=87.52 Aligned_cols=98 Identities=14% Similarity=0.209 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC-CceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG-TYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~-~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
...+.++|||||+.||..+++.|.++|++|.+..|+.++.+++ ++ ..+.++..|++|++++.++++ .+|
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 3457899999999999999999999999999999999876533 33 347889999999998666653 689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccc
Q 028418 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 166 aVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~ 194 (209)
.+|+.+ .|. ++..+.+.+-.+||.+||++
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA 142 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA 142 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc
Confidence 999872 011 55667777777999999976
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.7e-08 Score=87.07 Aligned_cols=73 Identities=14% Similarity=0.174 Sum_probs=60.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.++++|||||+|+||++++++|+++|++|.++.|++.. ...........+..|++|.+.+.+.+..+|.+||+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence 35789999999999999999999999999999998732 21111112357889999999999999999999998
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.2e-08 Score=93.05 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=79.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhh--cC--CceEEEEccCCCHHHHHHhhcCCcEEEEc-C-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES--FG--TYVESMAGDASNKKFLKTALRGVRSIICP-S- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~--~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a- 171 (209)
....-|.|||||+|+.||.+|-..|-+|..--|..+- ...+ .+ .++-+...|+.|+++++++++...+||.+ .
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr 140 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR 140 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence 4467799999999999999999999999999885432 2211 11 35778899999999999999999999998 1
Q ss_pred ---------h-----h--HHHHHHHhCCCCEEEEecccccc
Q 028418 172 ---------E-----G--FISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 ---------~-----g--~ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+ + .+...|+++||+|+|++|++++.
T Consensus 141 d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan 181 (391)
T KOG2865|consen 141 DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN 181 (391)
T ss_pred ccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc
Confidence 0 1 17788999999999999998854
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.7e-08 Score=90.20 Aligned_cols=75 Identities=15% Similarity=0.069 Sum_probs=59.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc--hhhh-cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES-FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~--a~~~-~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..+.+++|||||+|.||..+++.|.++|++|.++.|+... .... ...+.+++..|++|++++.++++ ++|
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 3456799999999999999999999999999999885422 1111 11234688999999998887765 589
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.|||+
T Consensus 287 ~vi~~ 291 (450)
T PRK08261 287 IVVHN 291 (450)
T ss_pred EEEEC
Confidence 99998
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.7e-08 Score=81.87 Aligned_cols=102 Identities=17% Similarity=0.054 Sum_probs=72.9
Q ss_pred CCCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCC-----------cch---h---hhcCCceEEEEccCCCHHHH
Q 028418 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK-----------RNA---M---ESFGTYVESMAGDASNKKFL 157 (209)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~-----------~~a---~---~~~~~~vevv~GDl~D~~sL 157 (209)
...+++||||||| .||++++++|+++|++|.+..|.. ... . ...+..+.++.+|++|++++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 4567999999995 799999999999999998875321 000 0 11234578899999999998
Q ss_pred HHhhc-------CCcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 158 KTALR-------GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 158 ~~AL~-------GvDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+++. .+|+|||.+ + +. ++..+++.+-.+||++||......
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 161 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP 161 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence 88774 369999982 0 11 234445555579999999876543
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.81 E-value=5e-08 Score=91.01 Aligned_cols=73 Identities=18% Similarity=0.257 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
..+++|||||++.||+.++++|.++|++|.++.|+.++... ..+..+.++..|++|++++.++++ .+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46799999999999999999999999999999998765432 234457789999999999888774 47999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 84 i~n 86 (520)
T PRK06484 84 VNN 86 (520)
T ss_pred EEC
Confidence 987
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.9e-08 Score=80.01 Aligned_cols=99 Identities=22% Similarity=0.289 Sum_probs=71.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc-c-h-h------hhcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-N-A-M------ESFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~-~-a-~------~~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
++||||++|.||..+++.|.+++. +|.++.|++. . . . ...+..++++..|++|++.+.+++..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999974 6888888832 1 1 1 12356689999999999999999864
Q ss_pred CcEEEEcC----h--------------------hH--HHHHHHhCCCCEEEEecccc-cccCC
Q 028418 164 VRSIICPS----E--------------------GF--ISNAGSLKGVQHVILLSQRQ-RWHSS 199 (209)
Q Consensus 164 vDaVIh~a----~--------------------g~--ll~AA~~aGVkriV~vSS~~-Vyg~~ 199 (209)
++.|||++ . |. +.++.....++.||++||++ +.|..
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~ 144 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP 144 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc
Confidence 47899982 0 11 45566678999999999976 45544
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.3e-08 Score=93.63 Aligned_cols=73 Identities=18% Similarity=0.218 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc---CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~---~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+++|+||||+|+||++++++|.++|++|.++.|++++..... ...++.+..|++|++.+.+.+.++|.+||+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 4679999999999999999999999999999999876543221 223678899999999999999999999987
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.4e-08 Score=83.61 Aligned_cols=73 Identities=15% Similarity=0.228 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc----hhh------hcCCceEEEEccCCCHHHHHHhhc-----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AME------SFGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~----a~~------~~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
.++++|||||+|+||+++++.|+++|++|.++.++... ... ..+..++++.+|++|++.+.++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999999998888765421 111 123468889999999999988775
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
.+|.+||+
T Consensus 87 ~~~id~li~~ 96 (257)
T PRK12744 87 FGRPDIAINT 96 (257)
T ss_pred hCCCCEEEEC
Confidence 57999998
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.5e-08 Score=87.06 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=70.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------c-CCceEEEEccCCC--HHH---HHHhhcC--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASN--KKF---LKTALRG-- 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~-~~~vevv~GDl~D--~~s---L~~AL~G-- 163 (209)
++.+|||||||.||++++++|.++|++|.++.|++++.... . ...+..+..|+++ .+. +.+.+.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 56899999999999999999999999999999998764321 1 1246778899985 333 3444555
Q ss_pred CcEEEEcC-----h---------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS-----E---------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a-----~---------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|.+||++ . ++ ++..+++.+-.+||++||...+
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~ 197 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAI 197 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 45888861 0 11 2344556778899999997764
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=9.3e-08 Score=78.15 Aligned_cols=59 Identities=14% Similarity=0.267 Sum_probs=52.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc---CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~ 170 (209)
|++|||||+|.||++++++|.++ ++|.++.|++. .+..|++|+++++++++ ++|.|||+
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ 62 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSA 62 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence 47999999999999999999999 99999998653 36789999999988876 68999998
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.6e-07 Score=81.95 Aligned_cols=73 Identities=15% Similarity=0.152 Sum_probs=58.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC---------cchhh------hcCCceEEEEccCCCHHHHHHhhc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAME------SFGTYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~---------~~a~~------~~~~~vevv~GDl~D~~sL~~AL~ 162 (209)
..+++|||||++.||+.++++|+++|++|.++.|+. +.... ..+..+.++..|++|++++.++++
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 457999999999999999999999999999988764 22211 113457789999999998877663
Q ss_pred -------CCcEEEEc
Q 028418 163 -------GVRSIICP 170 (209)
Q Consensus 163 -------GvDaVIh~ 170 (209)
.+|.+||+
T Consensus 85 ~~~~~~g~id~lv~n 99 (286)
T PRK07791 85 AAVETFGGLDVLVNN 99 (286)
T ss_pred HHHHhcCCCCEEEEC
Confidence 57999997
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.3e-08 Score=85.32 Aligned_cols=94 Identities=12% Similarity=0.147 Sum_probs=71.0
Q ss_pred EEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 103 LVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 103 LVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
|||||++.||.+++++|+++| ++|.+..|+.++.... .+..+.++..|++|++++.++++ .+|.+|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 9999999987654321 12357788999999999887764 579999
Q ss_pred EcC--------------h-----------hH------HHHHHHhCC--CCEEEEecccccc
Q 028418 169 CPS--------------E-----------GF------ISNAGSLKG--VQHVILLSQRQRW 196 (209)
Q Consensus 169 h~a--------------~-----------g~------ll~AA~~aG--VkriV~vSS~~Vy 196 (209)
|++ + ++ ++...++.+ -.|||++||...+
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 872 0 00 234444554 5799999997654
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=8.5e-08 Score=83.07 Aligned_cols=70 Identities=17% Similarity=0.208 Sum_probs=56.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc------CCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------GvDa 166 (209)
+++++|||| |+||++++++|. +|++|.++.|++.+.... .+..+.++.+|++|++++.++++ .+|.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357899998 699999999995 899999999987543221 13357889999999999988874 5899
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 80 li~n 83 (275)
T PRK06940 80 LVHT 83 (275)
T ss_pred EEEC
Confidence 9998
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.6e-08 Score=83.58 Aligned_cols=71 Identities=17% Similarity=0.135 Sum_probs=53.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh---h----cCCceEEEEccCCCHHHHH----Hhh------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME---S----FGTYVESMAGDASNKKFLK----TAL------ 161 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~---~----~~~~vevv~GDl~D~~sL~----~AL------ 161 (209)
+++|||||+|+||++++++|+++|++|.++.|+. +.... . .+..+.++.+|++|++++. +++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 5799999999999999999999999999987653 33211 1 1234567899999997553 222
Q ss_pred -cCCcEEEEc
Q 028418 162 -RGVRSIICP 170 (209)
Q Consensus 162 -~GvDaVIh~ 170 (209)
.++|+|||+
T Consensus 82 ~g~iD~lv~n 91 (267)
T TIGR02685 82 FGRCDVLVNN 91 (267)
T ss_pred cCCceEEEEC
Confidence 468999998
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.6e-08 Score=90.07 Aligned_cols=88 Identities=20% Similarity=0.222 Sum_probs=75.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhcCCcEEEEcCh--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICPSE-- 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a~-- 172 (209)
|++|||.|| |+||+.++..|.+++ .+|.+..|++++..+. ...+++..+.|+.|.+++.+++++.|+||++..
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 578999999 999999999999998 9999999998776543 234799999999999999999999999999842
Q ss_pred --hHHHHHHHhCCCCEE
Q 028418 173 --GFISNAGSLKGVQHV 187 (209)
Q Consensus 173 --g~ll~AA~~aGVkri 187 (209)
-++++||.++||.-+
T Consensus 80 ~~~~i~ka~i~~gv~yv 96 (389)
T COG1748 80 VDLTILKACIKTGVDYV 96 (389)
T ss_pred hhHHHHHHHHHhCCCEE
Confidence 248899999997643
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.8e-07 Score=84.28 Aligned_cols=104 Identities=16% Similarity=0.155 Sum_probs=81.3
Q ss_pred ccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCc-eEEEEccCCCHHHHHHhh---
Q 028418 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTY-VESMAGDASNKKFLKTAL--- 161 (209)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~-vevv~GDl~D~~sL~~AL--- 161 (209)
.++.-.++.|+||||+..||.+++.+|..+|.++..++|..++.+ +..... +.++++|++|.+++.+++
T Consensus 6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~ 85 (282)
T KOG1205|consen 6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA 85 (282)
T ss_pred cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence 356677899999999999999999999999999888887665432 223344 899999999999999775
Q ss_pred ----cCCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccc
Q 028418 162 ----RGVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 162 ----~GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.++|++|+.+ .|+ ++.-+++.+=.|||.+||+.-+
T Consensus 86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 5899999872 011 3444566677899999998644
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.8e-07 Score=78.28 Aligned_cols=70 Identities=17% Similarity=0.194 Sum_probs=57.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cC-CceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~-~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
|++|||||++.||..++++|. +|++|.++.|++++.... .+ ..+.++.+|++|++++.++++ .+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999998 699999999987654321 12 237789999999999887653 579
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.+|++
T Consensus 80 ~lv~n 84 (246)
T PRK05599 80 LAVVA 84 (246)
T ss_pred EEEEe
Confidence 99987
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.7e-07 Score=79.61 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=51.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHH----CCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhc
Q 028418 101 AVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~----~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~ 162 (209)
.+|||||++.||.+++++|.+ +|++|.++.|+.+..... .+..+.++.+|++|++++.++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~ 75 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLK 75 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHH
Confidence 589999999999999999987 799999999987654321 12357889999999998888764
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.3e-07 Score=77.83 Aligned_cols=73 Identities=10% Similarity=0.123 Sum_probs=60.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc--------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~--------G 163 (209)
.++++|||||++.||+.++++|.++|++|.++.|+.++.... .+..+..+..|++|++++.++++ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 457999999999999999999999999999999988654321 23456778899999999987652 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+||+
T Consensus 84 iD~li~n 90 (227)
T PRK08862 84 PDVLVNN 90 (227)
T ss_pred CCEEEEC
Confidence 8999997
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.2e-07 Score=86.22 Aligned_cols=86 Identities=21% Similarity=0.265 Sum_probs=67.3
Q ss_pred EEEEcCCCHHHHHHHHHHHHCC-C-cEEEEEeCCcchhhh----cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC---h
Q 028418 102 VLVTDGDSDIGQMVILSLIVKR-T-RIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSIICPS---E 172 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G-~-~VraLvR~~~~a~~~----~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---~ 172 (209)
|+|.|| |++|+.+++.|.++. + +|.+..|+.+++... ....+++++.|+.|+++|.++++++|.||++. .
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 799999 999999999998876 4 899999999886544 34679999999999999999999999999983 2
Q ss_pred h-HHHHHHHhCCCCEEEE
Q 028418 173 G-FISNAGSLKGVQHVIL 189 (209)
Q Consensus 173 g-~ll~AA~~aGVkriV~ 189 (209)
+ .++++|.++|+. .|=
T Consensus 80 ~~~v~~~~i~~g~~-yvD 96 (386)
T PF03435_consen 80 GEPVARACIEAGVH-YVD 96 (386)
T ss_dssp HHHHHHHHHHHT-E-EEE
T ss_pred hHHHHHHHHHhCCC-eec
Confidence 2 388999999974 444
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.1e-07 Score=81.35 Aligned_cols=90 Identities=14% Similarity=0.103 Sum_probs=71.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a------ 171 (209)
|+|||+||||. |+.|+++|.++||+|.+.+|+..........+...+..+..|.+.+.+.++ ++|+||+.+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~ 79 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQ 79 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHH
Confidence 58999999999 999999999999999999998876543333334456667788888988886 589999873
Q ss_pred -hhHHHHHHHhCCCCEEEEe
Q 028418 172 -EGFISNAGSLKGVQHVILL 190 (209)
Q Consensus 172 -~g~ll~AA~~aGVkriV~v 190 (209)
..+..++|++.|+..+=|.
T Consensus 80 is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 80 ITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred HHHHHHHHHHHhCCcEEEEE
Confidence 1237888999988877664
|
This enzyme was found to be a monomer by gel filtration. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.2e-07 Score=83.61 Aligned_cols=102 Identities=15% Similarity=0.099 Sum_probs=81.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hh---------hcCCceEEEEccCCCHHHHHHhhcCC--cE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-ME---------SFGTYVESMAGDASNKKFLKTALRGV--RS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~---------~~~~~vevv~GDl~D~~sL~~AL~Gv--Da 166 (209)
+++.||||-||+-|+.|++.||++||+|..+.|+.+.. .. .....+.++.||++|...|.++++-+ |-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 46899999999999999999999999999999875322 11 11234789999999999999999866 78
Q ss_pred EEEc-C-------------------hhH--HHHHHHhCCC--CEEEEecccccccCCC
Q 028418 167 IICP-S-------------------EGF--ISNAGSLKGV--QHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~-a-------------------~g~--ll~AA~~aGV--kriV~vSS~~Vyg~~~ 200 (209)
|+++ + .|+ +++|.+..|- -||...||...||...
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~ 139 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQ 139 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcc
Confidence 8888 2 133 8999988764 5677789988888653
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.8e-07 Score=81.93 Aligned_cols=102 Identities=13% Similarity=0.054 Sum_probs=75.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh--hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~--~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a 171 (209)
...+.+|+||||+|.||+.++..|..++ .+++.++++..... .+.....+....+++|+..+.++++|+|+||+++
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita 84 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA 84 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence 3457799999999999999999888555 68999988433221 1111112345667788777789999999999982
Q ss_pred -----hh---------------HHHHHHHhCCCCEEEEeccccccc
Q 028418 172 -----EG---------------FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 172 -----~g---------------~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.+ .+++++++++++++|+++|-.+..
T Consensus 85 G~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv 130 (321)
T PTZ00325 85 GVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNS 130 (321)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHH
Confidence 11 167889999999999999976643
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.1e-07 Score=76.24 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=61.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc---C--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~---~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++++|+||||.+|+.+++.|..+|++|+++.|+.+++.... . .+.++...|+.|.+.+.++++++|.||++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 34579999999999999999999999999999999887654321 1 13566778899999999999999999987
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.1e-06 Score=79.73 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=61.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcE---EEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRI---KALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~V---raLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~ 174 (209)
+++|+|.||||++|+++++.|.+++|++ ++++|+.+......-.+.++...|+.+. .++++|+||.+ ..+.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A~g~g~ 75 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFSAGGSV 75 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEECCChHH
Confidence 4689999999999999999999988865 8898776543322112246666676542 45799999987 3332
Q ss_pred ---HHHHHHhCCCCEEEEecc
Q 028418 175 ---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS 192 (209)
++....++|+ ++|=+|+
T Consensus 76 s~~~~~~~~~~G~-~VIDlS~ 95 (334)
T PRK14874 76 SKKYAPKAAAAGA-VVIDNSS 95 (334)
T ss_pred HHHHHHHHHhCCC-EEEECCc
Confidence 5666667787 5665665
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.3e-06 Score=79.42 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=76.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...++++|||||..||..++++|..+|.+|+...|+.++.... ....+.+++.|+.|..++++..+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 3448999999999999999999999999999999998654321 12457789999999999988764
Q ss_pred -CCcEEEEcC-----------hh-----------H------HHHHHHhCCCCEEEEecccc
Q 028418 163 -GVRSIICPS-----------EG-----------F------ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 163 -GvDaVIh~a-----------~g-----------~------ll~AA~~aGVkriV~vSS~~ 194 (209)
..|.+|+.+ +| . +++.++...-.|||++||..
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 457777652 22 1 56667766668999999954
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.44 E-value=5e-07 Score=82.20 Aligned_cols=106 Identities=17% Similarity=0.214 Sum_probs=81.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEe-----CCcchh-hhcCCceEEEEccCCCHHHHHHhhc--CCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVK-----DKRNAM-ESFGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR-----~~~~a~-~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh 169 (209)
+.+||||+.||||++.++.+... .+....+.. +...++ ....++..++.+|+.|...+...+. .+|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 78999999999999999999874 566666653 211111 1234667899999999999988875 6899999
Q ss_pred cC--------------------hhH--HHHHHHhC-CCCEEEEecccccccCCCCcchh
Q 028418 170 PS--------------------EGF--ISNAGSLK-GVQHVILLSQRQRWHSSSNERKC 205 (209)
Q Consensus 170 ~a--------------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg~~~~l~~~ 205 (209)
.+ .++ ++++++.. ++++|||+|+-.|||++...-..
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~ 145 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVV 145 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccc
Confidence 72 012 78888877 89999999999999998764433
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.5e-07 Score=75.61 Aligned_cols=73 Identities=8% Similarity=0.057 Sum_probs=58.0
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCcch---hhhcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~~a---~~~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..+++|||||+ +.||+.++++|+++|++|.+..|+.+.. .+.....+.+++.|++|++++.++++ .+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35789999999 7999999999999999999998874221 12223357789999999998887653 479
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.+|++
T Consensus 86 ~lv~n 90 (252)
T PRK06079 86 GIVHA 90 (252)
T ss_pred EEEEc
Confidence 99987
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.5e-06 Score=79.88 Aligned_cols=90 Identities=12% Similarity=0.176 Sum_probs=72.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHh-hcCCcEEEEcC--hh-H
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPS--EG-F 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~g-~ 174 (209)
|+|+|.|+ |.+|+++++.|.++|++|+++.|+++....... .+++++.||.+++..+.++ ++++|+||.+. .. .
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~~n 79 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDETN 79 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChHHH
Confidence 57999998 999999999999999999999998887655432 4689999999999999999 89999999872 22 1
Q ss_pred --HHHHHHhC-CCCEEEEe
Q 028418 175 --ISNAGSLK-GVQHVILL 190 (209)
Q Consensus 175 --ll~AA~~a-GVkriV~v 190 (209)
+...+++. +..++|..
T Consensus 80 ~~~~~~~r~~~~~~~ii~~ 98 (453)
T PRK09496 80 MVACQIAKSLFGAPTTIAR 98 (453)
T ss_pred HHHHHHHHHhcCCCeEEEE
Confidence 44556664 77766654
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.42 E-value=2e-06 Score=73.71 Aligned_cols=73 Identities=10% Similarity=-0.003 Sum_probs=56.1
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCcc------hhhh--cCCceEEEEccCCCHHHHHHhhc-----
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN------AMES--FGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~~------a~~~--~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
..+++|||||+ +.||+.++++|.++|++|.+..|+.++ ..+. ....+.+++.|++|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 45789999986 799999999999999999887665432 1111 11235688999999999987764
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
.+|.+||+
T Consensus 85 ~g~iD~lv~n 94 (258)
T PRK07370 85 WGKLDILVHC 94 (258)
T ss_pred cCCCCEEEEc
Confidence 57999987
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=3e-06 Score=73.21 Aligned_cols=90 Identities=17% Similarity=0.247 Sum_probs=71.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC--CceEEEEccCCCHHHHHHh-hcCCcEEEEc-C--hh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTA-LRGVRSIICP-S--EG 173 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~--~~vevv~GDl~D~~sL~~A-L~GvDaVIh~-a--~g 173 (209)
|+++|.| .|.+|++|++.|.++||+|.++.++++....... ....++.||-+|++.|.+| +..+|+++.+ . .-
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~ 79 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEV 79 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence 3566665 5899999999999999999999999988766333 4578999999999999999 8999999987 2 22
Q ss_pred H--HHHHH-HhCCCCEEEEe
Q 028418 174 F--ISNAG-SLKGVQHVILL 190 (209)
Q Consensus 174 ~--ll~AA-~~aGVkriV~v 190 (209)
+ +...+ ++.|++++|--
T Consensus 80 N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 80 NSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred HHHHHHHHHHhcCCCcEEEE
Confidence 2 33334 45799988753
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.5e-06 Score=74.43 Aligned_cols=74 Identities=16% Similarity=0.133 Sum_probs=58.7
Q ss_pred CCCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeCC--cchh---hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK--RNAM---ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~~--~~a~---~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...++++|||| ++.||..++++|.++|++|.+..|+. +... ...+..+.++..|++|++++.++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 34578999999 89999999999999999999998765 2111 1223357789999999998887753
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.+|++
T Consensus 85 ~iD~li~n 92 (256)
T PRK07889 85 GLDGVVHS 92 (256)
T ss_pred CCcEEEEc
Confidence 57999987
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.1e-06 Score=76.25 Aligned_cols=74 Identities=11% Similarity=0.087 Sum_probs=58.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc----------chh---h---hcCCceEEEEccCCCHHHHHHh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----------NAM---E---SFGTYVESMAGDASNKKFLKTA 160 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~----------~a~---~---~~~~~vevv~GDl~D~~sL~~A 160 (209)
...+++|||||++.||+.++++|+++|++|.++.|+.. +.. . ..+..+.++++|++|+++++++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 34679999999999999999999999999999999742 111 1 1123467899999999998877
Q ss_pred hc-------CCcEEEEc
Q 028418 161 LR-------GVRSIICP 170 (209)
Q Consensus 161 L~-------GvDaVIh~ 170 (209)
++ .+|.+|++
T Consensus 86 ~~~~~~~~g~iDilVnn 102 (305)
T PRK08303 86 VERIDREQGRLDILVND 102 (305)
T ss_pred HHHHHHHcCCccEEEEC
Confidence 63 57888875
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.34 E-value=8.7e-07 Score=80.56 Aligned_cols=69 Identities=16% Similarity=0.087 Sum_probs=50.7
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCC-------CcEEEEEeCCcchhhhcCCceE------EEEccCCCHHHHHHhhcCCcEE
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVE------SMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G-------~~VraLvR~~~~a~~~~~~~ve------vv~GDl~D~~sL~~AL~GvDaV 167 (209)
+|+||||+|+||++++..|+..+ .+|++++|++... ...+...+ ...+|+.....+.++++|+|.|
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV 82 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-ALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA 82 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-cccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence 79999999999999999998844 5899999865321 01111112 2234555567788999999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 83 I~t 85 (325)
T cd01336 83 ILV 85 (325)
T ss_pred EEe
Confidence 999
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.3e-06 Score=69.84 Aligned_cols=74 Identities=15% Similarity=0.161 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhh-------cC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------RG 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL-------~G 163 (209)
..++.++||||++.||+.+++.|.++|++|.+..|+.+.... ..+..+.++..|++|++.+.+++ ..
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 356799999999999999999999999999999987654321 12344678899999999887754 36
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+||+
T Consensus 94 iDilVnn 100 (169)
T PRK06720 94 IDMLFQN 100 (169)
T ss_pred CCEEEEC
Confidence 8999998
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.3e-06 Score=77.11 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh--hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~--~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
.+..+|+||||+|+||+.++..|..++. +++.+++++.... .+..........++.+.+++.++++|+|.|||++
T Consensus 16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 16 APGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 3456999999999999999999987664 7999988772221 2111112234445555556889999999999982
Q ss_pred ----hh---------------HHHHHHHhCCCCEEEEecccccc
Q 028418 172 ----EG---------------FISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 ----~g---------------~ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.+ .+++++++.+.+.+|+++|--+.
T Consensus 96 ~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD 139 (323)
T PLN00106 96 VPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVN 139 (323)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 11 16778889999999999996554
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=98.32 E-value=5.6e-06 Score=62.61 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=57.4
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
|+|.|. |.+|+.+++.|.+.+++|+++.++++........+++++.||.+|++.|.++ ++.+++|+.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~ 69 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVIL 69 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEc
Confidence 577777 6899999999999778999999999877665556689999999999999986 5789999987
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.6e-06 Score=80.70 Aligned_cols=99 Identities=19% Similarity=0.220 Sum_probs=67.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc-ChhH
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP-SEGF 174 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~-a~g~ 174 (209)
.+++|+|.||||++|+.+++.|.++ .++|++++++.+..+........+..+|+.+...++.+ ++++|+||.+ ..+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 4568999999999999999999888 78999999865443221111223344555544444443 7899999997 3222
Q ss_pred ---HHHHHHhCCCCEEEEecccccccC
Q 028418 175 ---ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
++.++ +.| .++|-+|+..-+.+
T Consensus 117 s~~i~~~~-~~g-~~VIDlSs~fRl~~ 141 (381)
T PLN02968 117 TQEIIKAL-PKD-LKIVDLSADFRLRD 141 (381)
T ss_pred HHHHHHHH-hCC-CEEEEcCchhccCC
Confidence 56665 456 67999998665443
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.1e-06 Score=72.67 Aligned_cols=73 Identities=11% Similarity=0.094 Sum_probs=57.5
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCc---chhh---hc-CCceEEEEccCCCHHHHHHhhc------
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAME---SF-GTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~---~a~~---~~-~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
..++++||||+ +-||+.++++|.++|++|.+..|+.+ .... .. +..+.+++.|++|++++.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 45799999997 89999999999999999998877532 1111 11 2457789999999999887764
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
.+|.+||+
T Consensus 86 g~ld~lv~n 94 (257)
T PRK08594 86 GVIHGVAHC 94 (257)
T ss_pred CCccEEEEC
Confidence 47999886
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.24 E-value=6.7e-07 Score=79.57 Aligned_cols=97 Identities=20% Similarity=0.203 Sum_probs=81.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc--Ch---
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP--SE--- 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~--a~--- 172 (209)
....||.|+.||.|++|++..+..++.|..|.|+..+ ....+..++.|+++|.....-+..++.|+..|+-+ ..
T Consensus 52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~ 131 (283)
T KOG4288|consen 52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNI 131 (283)
T ss_pred HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccch
Confidence 4578999999999999999999999999999998754 34556778999999999888889999999999877 11
Q ss_pred -------hH----HHHHHHhCCCCEEEEeccccc
Q 028418 173 -------GF----ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 173 -------g~----ll~AA~~aGVkriV~vSS~~V 195 (209)
++ -+.+|.++||++|||+|....
T Consensus 132 ~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~ 165 (283)
T KOG4288|consen 132 ILMDRINGTANINAVKAAAKAGVPRFVYISAHDF 165 (283)
T ss_pred HHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc
Confidence 11 466788999999999997544
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.24 E-value=4e-06 Score=72.60 Aligned_cols=67 Identities=4% Similarity=0.131 Sum_probs=49.1
Q ss_pred EEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC--HHHHHHhhcCCcEEEEc
Q 028418 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICP 170 (209)
Q Consensus 103 LVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D--~~sL~~AL~GvDaVIh~ 170 (209)
+=-.+|||+|++++++|+++|++|+++.|+..... ....+++++..+..+ .+.+.+++.++|+|||+
T Consensus 20 itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~ 88 (229)
T PRK06732 20 ITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHS 88 (229)
T ss_pred ecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeC
Confidence 33367999999999999999999999997653221 112356776654433 35677778899999998
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.8e-06 Score=73.15 Aligned_cols=73 Identities=19% Similarity=0.247 Sum_probs=53.7
Q ss_pred CCCeEEEEcCC----------------CHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHH
Q 028418 98 ARDAVLVTDGD----------------SDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 98 ~~~~ILVTGAT----------------GfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~ 159 (209)
.+++||||+|- ||+|++|+++|+.+|++|+++.+......... ...+..+.++....+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 46789999775 99999999999999999999986432111111 1224456775555578888
Q ss_pred hhc--CCcEEEEc
Q 028418 160 ALR--GVRSIICP 170 (209)
Q Consensus 160 AL~--GvDaVIh~ 170 (209)
+++ ++|+|||+
T Consensus 82 ~~~~~~~D~VIH~ 94 (229)
T PRK09620 82 IITHEKVDAVIMA 94 (229)
T ss_pred HhcccCCCEEEEC
Confidence 884 78999999
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.4e-06 Score=71.95 Aligned_cols=72 Identities=7% Similarity=0.034 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCcch---hhh---cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNA---MES---FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~~a---~~~---~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
.++.+|||||++ .||+.++++|.++|++|.+..|+.... ... .+ ...++++|++|++++.++++
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 357899999997 999999999999999999988875321 111 12 23468999999999887763
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.+|++
T Consensus 85 ~iD~lVnn 92 (271)
T PRK06505 85 KLDFVVHA 92 (271)
T ss_pred CCCEEEEC
Confidence 57999987
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.9e-06 Score=79.12 Aligned_cols=100 Identities=22% Similarity=0.277 Sum_probs=73.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC---CcEEEEEeCCcc--hhh----hc---------------CCceEEEEccCC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRN--AME----SF---------------GTYVESMAGDAS 152 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G---~~VraLvR~~~~--a~~----~~---------------~~~vevv~GDl~ 152 (209)
-..++|||||||||+|.-+++.|+..- -++..+.|.... +.+ .+ -..+..+.||+.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 356799999999999999999999753 367777786532 111 10 034678899998
Q ss_pred CHH------HHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhC-CCCEEEEecccccc
Q 028418 153 NKK------FLKTALRGVRSIICPS-----------------EGF--ISNAGSLK-GVQHVILLSQRQRW 196 (209)
Q Consensus 153 D~~------sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~a-GVkriV~vSS~~Vy 196 (209)
+++ .++...+.+++|||++ .|+ +++.|++. ..+-+||+|+.-+.
T Consensus 90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n 159 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN 159 (467)
T ss_pred CcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee
Confidence 753 5556678999999992 122 67788764 78999999997665
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=6.7e-06 Score=70.34 Aligned_cols=73 Identities=8% Similarity=-0.058 Sum_probs=56.6
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCcch---hhhc--CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESF--GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~~a---~~~~--~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++|||||+ +.||+.++++|+++|++|.+..|+.+.. .... ...+.++.+|++|++++.++++ .
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 45799999998 5999999999999999999998875421 1111 1234578999999998887653 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|++|++
T Consensus 89 ld~lv~n 95 (258)
T PRK07533 89 LDFLLHS 95 (258)
T ss_pred CCEEEEc
Confidence 7999987
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.1e-05 Score=89.74 Aligned_cols=101 Identities=17% Similarity=0.258 Sum_probs=76.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcc-----------------------------------------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRN----------------------------------------- 135 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~----------------------------------------- 135 (209)
..+++|||||++.||..++++|.++ |.+|.++.|++..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4679999999999999999999988 6999999998210
Q ss_pred ----------h--hhhcCCceEEEEccCCCHHHHHHhhc------CCcEEEEcC------------------------hh
Q 028418 136 ----------A--MESFGTYVESMAGDASNKKFLKTALR------GVRSIICPS------------------------EG 173 (209)
Q Consensus 136 ----------a--~~~~~~~vevv~GDl~D~~sL~~AL~------GvDaVIh~a------------------------~g 173 (209)
. ....+..++++.+|++|++++.++++ ++|.|||.+ .|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0 01124457889999999999988875 579999972 01
Q ss_pred H--HHHHHHhCCCCEEEEeccccc-ccC
Q 028418 174 F--ISNAGSLKGVQHVILLSQRQR-WHS 198 (209)
Q Consensus 174 ~--ll~AA~~aGVkriV~vSS~~V-yg~ 198 (209)
. +++++.....++||++||... +|.
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~ 2183 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFYGN 2183 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcCCC
Confidence 1 566666667789999999754 443
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.9e-06 Score=71.61 Aligned_cols=72 Identities=10% Similarity=0.072 Sum_probs=56.5
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCc---chh---hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAM---ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~---~a~---~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+.+|||||+ +.||+.++++|.++|++|.+..|+.+ ... ...+.. .++++|++|++++.++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35799999997 79999999999999999999888742 111 112323 578999999999887763
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.+||+
T Consensus 83 ~iDilVnn 90 (274)
T PRK08415 83 KIDFIVHS 90 (274)
T ss_pred CCCEEEEC
Confidence 57999987
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=8.9e-06 Score=70.50 Aligned_cols=73 Identities=10% Similarity=0.060 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCc---chhhhc--CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~---~a~~~~--~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||++ .||+.++++|+++|++|....|+.. ...... ...+.++.+|++|++++.++++ .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 457899999986 8999999999999999988888732 111111 1235678999999999998774 4
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+||+
T Consensus 85 iD~linn 91 (262)
T PRK07984 85 FDGFVHS 91 (262)
T ss_pred CCEEEEC
Confidence 7999987
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.1e-05 Score=69.37 Aligned_cols=73 Identities=7% Similarity=0.046 Sum_probs=55.7
Q ss_pred CCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeCCc---chhhhc--CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~~~---~a~~~~--~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++||||| ++.||+.++++|+++|++|.+..|+.. ...+.. ......+++|++|++++.++++ .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999997 679999999999999999988766532 111111 1234578999999999887763 5
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+||+
T Consensus 85 iD~lVnn 91 (261)
T PRK08690 85 LDGLVHS 91 (261)
T ss_pred CcEEEEC
Confidence 7999988
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.13 E-value=1e-05 Score=74.29 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=58.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEE--EEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc-Chh-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA--LVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP-SEG- 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~Vra--LvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g- 173 (209)
+.+|+|+||||++|+.+++.|.+++|++.. .+++.+.+.+... .+ ...++.+.+.. .++++|.||.+ ..+
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~--~~~~vD~vFla~p~~~ 78 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG---KNLRVREVDSF--DFSQVQLAFFAAGAAV 78 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC---cceEEeeCChH--HhcCCCEEEEcCCHHH
Confidence 468999999999999999999988887666 3345544322111 11 23444444432 26899999997 223
Q ss_pred --HHHHHHHhCCCCEEEEeccc
Q 028418 174 --FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS~ 193 (209)
.+++.+.++|++ +|=+|+.
T Consensus 79 s~~~v~~~~~~G~~-VIDlS~~ 99 (336)
T PRK05671 79 SRSFAEKARAAGCS-VIDLSGA 99 (336)
T ss_pred HHHHHHHHHHCCCe-EEECchh
Confidence 277778888864 6656653
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=3.4e-06 Score=77.79 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=52.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHC-C-CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVK-R-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~-G-~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...+++||||||+|+||++++++|+.+ | .++..+.|+.+++.... .++..+++. .+.+++.++|.|||+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La---~el~~~~i~---~l~~~l~~aDiVv~~ 222 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQ---AELGGGKIL---SLEEALPEADIVVWV 222 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHH---HHhccccHH---hHHHHHccCCEEEEC
Confidence 456789999999999999999999865 5 58888888876654332 123334544 477899999999998
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=98.11 E-value=2.1e-05 Score=72.42 Aligned_cols=95 Identities=20% Similarity=0.253 Sum_probs=73.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHh-hcCCcEEEEcC--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTA-LRGVRSIICPS-- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a-- 171 (209)
.++++|+|.|+ |.+|+++++.|.++|++|.++.++++...... ..++.++.||.+|++.|.++ ++.+|+||.+.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~ 307 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND 307 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence 34678999999 99999999999999999999999987654332 23578999999999999654 57899998872
Q ss_pred -hhH--HHHHHHhCCCCEEEEecc
Q 028418 172 -EGF--ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 -~g~--ll~AA~~aGVkriV~vSS 192 (209)
..+ +...|++.++.++|....
T Consensus 308 ~~~n~~~~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 308 DEANILSSLLAKRLGAKKVIALVN 331 (453)
T ss_pred cHHHHHHHHHHHHhCCCeEEEEEC
Confidence 222 334567778887776544
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.8e-05 Score=72.36 Aligned_cols=86 Identities=16% Similarity=0.158 Sum_probs=58.9
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEE---eCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH--
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALV---KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF-- 174 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLv---R~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~-- 174 (209)
+|+|.||||++|+.+++.|.+++|++..++ ++.+......-.+.+.+..|+. ..+++++|+||.+ ..+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~~s~ 75 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGSVSK 75 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHHHHH
Confidence 589999999999999999999889876555 5544322221123567777774 2356899999987 3332
Q ss_pred -HHHHHHhCCCCEEEEecc
Q 028418 175 -ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 -ll~AA~~aGVkriV~vSS 192 (209)
++..+.++|+ ++|=+|+
T Consensus 76 ~~a~~~~~~G~-~VID~ss 93 (339)
T TIGR01296 76 EFAPKAAKCGA-IVIDNTS 93 (339)
T ss_pred HHHHHHHHCCC-EEEECCH
Confidence 5555667787 4665555
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.3e-05 Score=68.78 Aligned_cols=72 Identities=8% Similarity=-0.078 Sum_probs=54.6
Q ss_pred CCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCcc---hhhhcC--CceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRN---AMESFG--TYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~~---a~~~~~--~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.+++|||||++ .||+.++++|.++|++|.+..|+... ...... ....++++|++|++++.++++ .+
T Consensus 8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 87 (260)
T PRK06603 8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF 87 (260)
T ss_pred CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 46899999997 79999999999999999888887421 111111 122357899999999888774 47
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.+|+.
T Consensus 88 DilVnn 93 (260)
T PRK06603 88 DFLLHG 93 (260)
T ss_pred cEEEEc
Confidence 998886
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.3e-05 Score=68.98 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=54.8
Q ss_pred CCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeC---Ccchhhh---cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD---KRNAMES---FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~---~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++||||| ++.||+.++++|+++|++|.+..|. .+..... .+ ...++..|++|++++.++++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4579999996 6799999999999999999887643 2222211 22 23468899999999988874
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
.+|.+|++
T Consensus 84 ~iD~lvnn 91 (260)
T PRK06997 84 GLDGLVHS 91 (260)
T ss_pred CCcEEEEc
Confidence 57999986
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.6e-05 Score=69.06 Aligned_cols=71 Identities=6% Similarity=0.020 Sum_probs=55.5
Q ss_pred CCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCc---chhhh---cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 99 RDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES---FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 99 ~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~---~a~~~---~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.+++|||||+ +.||..++++|.++|++|.+..|+.. ..... .+ ...++++|++|++++.++++ .
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999997 89999999999999999988777632 11111 12 25578999999999988764 4
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+||+
T Consensus 89 iD~lv~n 95 (272)
T PRK08159 89 LDFVVHA 95 (272)
T ss_pred CcEEEEC
Confidence 7999987
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.2e-05 Score=64.75 Aligned_cols=74 Identities=15% Similarity=0.237 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hhhhcC----CceEEEEccCCC-HHHHHHhhc----
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESFG----TYVESMAGDASN-KKFLKTALR---- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~~~~~----~~vevv~GDl~D-~~sL~~AL~---- 162 (209)
..++.||||||++.||..++++|+++|+.|.++.|+... ...... ..+.+...|+++ ++++..+++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999987653 112222 356778899998 887776653
Q ss_pred ---CCcEEEEc
Q 028418 163 ---GVRSIICP 170 (209)
Q Consensus 163 ---GvDaVIh~ 170 (209)
++|.+|+.
T Consensus 83 ~~g~id~lvnn 93 (251)
T COG1028 83 EFGRIDILVNN 93 (251)
T ss_pred HcCCCCEEEEC
Confidence 48877776
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.7e-05 Score=68.88 Aligned_cols=94 Identities=14% Similarity=0.088 Sum_probs=64.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHH---CCCcEEEEEeCCcch---hhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNA---MESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~---~G~~VraLvR~~~~a---~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
|+|+|+||||.||++++..|.. .++++++++|++... ..... .....+.+ .+.+.+.++++++|.||.++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence 5899999999999999988744 356888888875321 11111 11123333 23345678899999999882
Q ss_pred ----hh---------------HHHHHHHhCCCCEEEEeccccc
Q 028418 172 ----EG---------------FISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 172 ----~g---------------~ll~AA~~aGVkriV~vSS~~V 195 (209)
.+ .+++++++.+.+++|.+.|--+
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~ 121 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPV 121 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence 11 1677888899999999988433
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.6e-05 Score=79.84 Aligned_cols=99 Identities=15% Similarity=0.092 Sum_probs=73.0
Q ss_pred CCccccCCCCeEEEEcCCCHHHHHHHHHHHHC-CCc-------------EEEEEeCCcchhhhcC--CceEEEEccCCCH
Q 028418 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVK-RTR-------------IKALVKDKRNAMESFG--TYVESMAGDASNK 154 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~-G~~-------------VraLvR~~~~a~~~~~--~~vevv~GDl~D~ 154 (209)
+.......+++|+|.|| |+||+.+++.|.+. +++ |.+.+++++.+..... ++++.++.|+.|.
T Consensus 561 ~~~~~~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~ 639 (1042)
T PLN02819 561 EKAEVTKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDS 639 (1042)
T ss_pred ccccccccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCH
Confidence 33344566889999997 99999999999764 333 6666666666543322 3578899999999
Q ss_pred HHHHHhhcCCcEEEEcC----hhHHHHHHHhCCCCEEEEec
Q 028418 155 KFLKTALRGVRSIICPS----EGFISNAGSLKGVQHVILLS 191 (209)
Q Consensus 155 ~sL~~AL~GvDaVIh~a----~g~ll~AA~~aGVkriV~vS 191 (209)
+.+.++++++|+||.+. ...++.+|.++|+ |+|-.|
T Consensus 640 e~L~~~v~~~DaVIsalP~~~H~~VAkaAieaGk-Hvv~ek 679 (1042)
T PLN02819 640 ESLLKYVSQVDVVISLLPASCHAVVAKACIELKK-HLVTAS 679 (1042)
T ss_pred HHHHHhhcCCCEEEECCCchhhHHHHHHHHHcCC-CEEECc
Confidence 99999999999999982 2237778888884 665554
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00014 Score=56.56 Aligned_cols=86 Identities=21% Similarity=0.277 Sum_probs=54.0
Q ss_pred eEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCc-ch---hhhcC---CceEEEEccCCCHHHHHHhhcCCcEEEEc-C
Q 028418 101 AVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR-NA---MESFG---TYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~-~a---~~~~~---~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a 171 (209)
+|.|.||||++|+.+++.|.+. ..++..++.+.. .. ...++ ...+...-+ .+++ .+.++|.||++ .
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence 6899999999999999988884 456666665444 22 12221 112232222 3333 45999999998 3
Q ss_pred hhH---HHHHHHhCCCCEEEEecc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS 192 (209)
.+. +...+.+.|+ ++|=+|+
T Consensus 76 ~~~~~~~~~~~~~~g~-~ViD~s~ 98 (121)
T PF01118_consen 76 HGASKELAPKLLKAGI-KVIDLSG 98 (121)
T ss_dssp HHHHHHHHHHHHHTTS-EEEESSS
T ss_pred hhHHHHHHHHHhhCCc-EEEeCCH
Confidence 332 6667778887 5665555
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=7e-05 Score=72.01 Aligned_cols=71 Identities=14% Similarity=0.222 Sum_probs=61.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
++.|+|.| .|.+|++++++|.++|++|.++++|+++.+.....+..++.||.+|++.+++| ++.+|+|+.+
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 56888887 58899999999999999999999999877655556789999999999999876 4788988876
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.1e-05 Score=69.94 Aligned_cols=93 Identities=14% Similarity=0.034 Sum_probs=59.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhh--cCCceEE-EEccCCCHHHHHHhhcCCcEEEEc-Chh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES--FGTYVES-MAGDASNKKFLKTALRGVRSIICP-SEG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~--~~~~vev-v~GDl~D~~sL~~AL~GvDaVIh~-a~g 173 (209)
+++|+|.||||++|+.+++.|.+. +++++++.++.+..+.. ..+.+.. ...++.+.+.. ++.++|+||++ ..+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~~ 79 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPHG 79 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCcH
Confidence 468999999999999999999876 68898888744332111 0111111 12234444432 56889999988 222
Q ss_pred ---HHHHHHHhCCCCEEEEecccc
Q 028418 174 ---FISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 174 ---~ll~AA~~aGVkriV~vSS~~ 194 (209)
.++.++.++| +++|=+|+.-
T Consensus 80 ~~~~~v~~a~~aG-~~VID~S~~f 102 (343)
T PRK00436 80 VSMDLAPQLLEAG-VKVIDLSADF 102 (343)
T ss_pred HHHHHHHHHHhCC-CEEEECCccc
Confidence 2666666777 6788777643
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00013 Score=67.02 Aligned_cols=75 Identities=21% Similarity=0.223 Sum_probs=62.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc----CCceEEEEccCCCHHHHHHhhc---------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR--------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~----~~~vevv~GDl~D~~sL~~AL~--------- 162 (209)
..+.+.|||||+....|+.++++|.++|+.|.|-.-.++.++.+. .+....++.|+++++++++|.+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 456778999999999999999999999999999997776654332 3567788999999999999985
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
|--+||+.
T Consensus 106 gLwglVNN 113 (322)
T KOG1610|consen 106 GLWGLVNN 113 (322)
T ss_pred cceeEEec
Confidence 45567776
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.88 E-value=3.4e-05 Score=69.01 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=66.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCC--cEEEEcC---
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS--- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~Gv--DaVIh~a--- 171 (209)
+++|||||+||.+|++|++.+.+++. +=.++. .--..|+++.+..++.++-. ..|||++
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~--------------~skd~DLt~~a~t~~lF~~ekPthVIhlAAmV 66 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI--------------GSKDADLTNLADTRALFESEKPTHVIHLAAMV 66 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe--------------ccccccccchHHHHHHHhccCCceeeehHhhh
Confidence 47999999999999999999998876 222221 11245789999888888654 6788882
Q ss_pred --------------------hhHHHHHHHhCCCCEEEEecccccccCC
Q 028418 172 --------------------EGFISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 --------------------~g~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
..+++..|-+.||+++|++-|..+|..-
T Consensus 67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdk 114 (315)
T KOG1431|consen 67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDK 114 (315)
T ss_pred cchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCC
Confidence 0127888999999999999888777553
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.85 E-value=5.8e-05 Score=69.10 Aligned_cols=92 Identities=13% Similarity=0.074 Sum_probs=56.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEE-EeCCcchh---hhcCCceEEE-EccCCCHHHHHHhhcCCcEEEEc-Ch
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKRNAM---ESFGTYVESM-AGDASNKKFLKTALRGVRSIICP-SE 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraL-vR~~~~a~---~~~~~~vevv-~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (209)
++|+|.||||++|+.+++.|.+. +++++++ +++.+..+ ..++ .+... ..++.+. ...+.+.++|+||++ ..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~ 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEPI-DEEEIAEDADVVFLALPH 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc-cccccCCceeecC-CHHHhhcCCCEEEECCCc
Confidence 47999999999999999999875 6788866 43332211 1122 11111 1112211 123444689999998 22
Q ss_pred hH---HHHHHHhCCCCEEEEecccc
Q 028418 173 GF---ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 173 g~---ll~AA~~aGVkriV~vSS~~ 194 (209)
+. ++.++.++| .++|=+|+.-
T Consensus 79 ~~s~~~~~~~~~~G-~~VIDlS~~f 102 (346)
T TIGR01850 79 GVSAELAPELLAAG-VKVIDLSADF 102 (346)
T ss_pred hHHHHHHHHHHhCC-CEEEeCChhh
Confidence 22 666677778 7788888753
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00017 Score=64.87 Aligned_cols=36 Identities=11% Similarity=0.025 Sum_probs=32.0
Q ss_pred CCCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeCC
Q 028418 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK 133 (209)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~~ 133 (209)
...+++||||| +..||..++++|.++|.+|.+ +|+.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~ 44 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWV 44 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCc
Confidence 56789999999 799999999999999999988 6643
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00012 Score=66.87 Aligned_cols=94 Identities=15% Similarity=0.123 Sum_probs=58.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEE------------EEccCCCHHHHHHhhcCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVES------------MAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vev------------v~GDl~D~~sL~~AL~GvD 165 (209)
+.+|+|+||||++|+.+++.|++... ++++++++.+.+......-..+ +...-.+++. ++++|
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~D 78 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDDVD 78 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcCCC
Confidence 46899999999999999999987644 8888866664432221100000 1111124443 46899
Q ss_pred EEEEc-ChhH---HHHHHHhCCCCEEEEecccccc
Q 028418 166 SIICP-SEGF---ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 166 aVIh~-a~g~---ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.||.+ ..+. +++++.++|++.|.+.++...+
T Consensus 79 vVf~a~p~~~s~~~~~~~~~~G~~vIDls~~fR~~ 113 (349)
T PRK08664 79 IVFSALPSDVAGEVEEEFAKAGKPVFSNASAHRMD 113 (349)
T ss_pred EEEEeCChhHHHHHHHHHHHCCCEEEECCchhcCC
Confidence 99887 2222 6677788898866665544333
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00016 Score=70.69 Aligned_cols=71 Identities=20% Similarity=0.241 Sum_probs=62.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
++.|+|.| -|.+|+++++.|.++|++++++++|++..+.....+..++.||.+|++.|++| ++.+|+|+.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 56788887 79999999999999999999999999877655445688999999999999987 6889999987
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.76 E-value=5.6e-05 Score=70.84 Aligned_cols=87 Identities=16% Similarity=0.247 Sum_probs=69.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH----CCCcEEEEEeCCcchhhh-----------cCCceEEEEccCCCHHHHHHhhcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~----~G~~VraLvR~~~~a~~~-----------~~~~vevv~GDl~D~~sL~~AL~G 163 (209)
+--+.|.|||||+|..+++.++. .+...-+..||+++..+. +...+ ++.+|..|+++|.+-.+-
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~ 83 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQ 83 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhh
Confidence 34588999999999999999998 788888888999876421 12234 899999999999999999
Q ss_pred CcEEEEcC-----hh-HHHHHHHhCCCCE
Q 028418 164 VRSIICPS-----EG-FISNAGSLKGVQH 186 (209)
Q Consensus 164 vDaVIh~a-----~g-~ll~AA~~aGVkr 186 (209)
+..|+.|. .| .++.||.++|..|
T Consensus 84 ~~vivN~vGPyR~hGE~VVkacienG~~~ 112 (423)
T KOG2733|consen 84 ARVIVNCVGPYRFHGEPVVKACIENGTHH 112 (423)
T ss_pred hEEEEeccccceecCcHHHHHHHHcCCce
Confidence 99999882 22 3777777777544
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0004 Score=63.37 Aligned_cols=105 Identities=12% Similarity=0.191 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcC--CceEEEEccCCCHHHHHHhh-------cCC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTAL-------RGV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~--~~vevv~GDl~D~~sL~~AL-------~Gv 164 (209)
..+..||||||.+.+|+.++.++.++|..+.+.+.+.+...+ ... ..+..+..|++|++.+.+.. ..+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 456799999999999999999999999988888888865431 111 25788999999998776554 467
Q ss_pred cEEEEcC------------h------------h------HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 165 RSIICPS------------E------------G------FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 165 DaVIh~a------------~------------g------~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+.+|+.+ + + .++..+.+..=.|||-++|+.-+-...+
T Consensus 116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g 182 (300)
T KOG1201|consen 116 DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG 182 (300)
T ss_pred eEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc
Confidence 8888762 0 1 1567778888899999998655444433
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00031 Score=64.65 Aligned_cols=88 Identities=13% Similarity=0.117 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-----eCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-----KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-----R~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a 171 (209)
...+|+|.||||++|+.+++.|.+++|++.-+. |+..+.... .+.+++..++. .+++.++|+||.+ .
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~--~~~~~~v~~~~-----~~~~~~~D~vf~a~p 78 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF--EGRDYTVEELT-----EDSFDGVDIALFSAG 78 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee--cCceeEEEeCC-----HHHHcCCCEEEECCC
Confidence 346899999999999999999998888655443 333222111 12444544443 2356899999987 3
Q ss_pred hhH---HHHHHHhCCCCEEEEeccc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
.+. ++..+.++|+ ++|=+|+.
T Consensus 79 ~~~s~~~~~~~~~~g~-~VIDlS~~ 102 (344)
T PLN02383 79 GSISKKFGPIAVDKGA-VVVDNSSA 102 (344)
T ss_pred cHHHHHHHHHHHhCCC-EEEECCch
Confidence 332 5555566674 46666653
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0002 Score=63.08 Aligned_cols=73 Identities=12% Similarity=0.211 Sum_probs=59.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhh-------cCCcEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTAL-------RGVRSII 168 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL-------~GvDaVI 168 (209)
...+|||||++..||..+++++++.|-+|..-.|+.+...+.. .+.+.-++.|+.|.++.++.+ ...+++|
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 3569999999999999999999999999999999997764322 245777899999999766554 2568888
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
.+
T Consensus 84 NN 85 (245)
T COG3967 84 NN 85 (245)
T ss_pred ec
Confidence 77
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00071 Score=60.09 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=75.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------c---CCceEEEEccCCCHHHHHHhh-----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTAL----- 161 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~---~~~vevv~GDl~D~~sL~~AL----- 161 (209)
....+.+|||||+.-||+.++++|.+.|.+|....|+.+..... . +..+..+..|+++.+...+++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999988753211 1 234788999999888766654
Q ss_pred ---cCCcEEEEcC-------------------------hhH---HH----HHHHhCCCCEEEEecccccccC
Q 028418 162 ---RGVRSIICPS-------------------------EGF---IS----NAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 162 ---~GvDaVIh~a-------------------------~g~---ll----~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
-..|.+|+.+ .|. +. ...++.+-..||++||...+..
T Consensus 85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~ 156 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP 156 (270)
T ss_pred HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC
Confidence 2479988761 011 11 2234557789999999865544
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00028 Score=65.02 Aligned_cols=75 Identities=16% Similarity=0.305 Sum_probs=60.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--Cc---eEEEEccCCCHHHHHHhhcC----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TY---VESMAGDASNKKFLKTALRG---- 163 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~---vevv~GDl~D~~sL~~AL~G---- 163 (209)
..++..|+|||++..+|..++..+..+|++|+++.|+.++.... +. .+ +.+..+|+.|-+++..++++
T Consensus 30 ~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~ 109 (331)
T KOG1210|consen 30 PKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDL 109 (331)
T ss_pred cCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhc
Confidence 34557899999999999999999999999999999998765322 11 22 44778999999888887754
Q ss_pred ---CcEEEEc
Q 028418 164 ---VRSIICP 170 (209)
Q Consensus 164 ---vDaVIh~ 170 (209)
.|.+|||
T Consensus 110 ~~~~d~l~~c 119 (331)
T KOG1210|consen 110 EGPIDNLFCC 119 (331)
T ss_pred cCCcceEEEe
Confidence 3889988
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00016 Score=64.39 Aligned_cols=72 Identities=8% Similarity=0.074 Sum_probs=57.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCC---cchhhh---c---CCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAMES---F---GTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~---~~a~~~---~---~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
..++++|||| |.+|+.++..|...|++ |.++.|+. +++... + ...+.+...|+.|.+.+.++++.+|.|
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 4568999999 89999999999999987 99999986 443321 1 123456678999998899899999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|++
T Consensus 204 INa 206 (289)
T PRK12548 204 VNA 206 (289)
T ss_pred EEe
Confidence 987
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.65 E-value=9.7e-05 Score=65.87 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----------cCCce------EEEEccCCCHHHHHHh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYV------ESMAGDASNKKFLKTA 160 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----------~~~~v------evv~GDl~D~~sL~~A 160 (209)
|.++|.|+| +|.+|..++..|+.+|++|++..|+++..... ...+. +.....+.-..++.++
T Consensus 1 ~~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a 79 (308)
T PRK06129 1 PMGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADA 79 (308)
T ss_pred CCcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHh
Confidence 456899999 99999999999999999999999988644321 01110 0000011111346678
Q ss_pred hcCCcEEEEc-Ch--h---HHHHHHHhCCCCEEEEecccccc
Q 028418 161 LRGVRSIICP-SE--G---FISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 161 L~GvDaVIh~-a~--g---~ll~AA~~aGVkriV~vSS~~Vy 196 (209)
++++|.||.+ .+ . .++.......-.++|+.|+.+.+
T Consensus 80 ~~~ad~Vi~avpe~~~~k~~~~~~l~~~~~~~~ii~ssts~~ 121 (308)
T PRK06129 80 VADADYVQESAPENLELKRALFAELDALAPPHAILASSTSAL 121 (308)
T ss_pred hCCCCEEEECCcCCHHHHHHHHHHHHHhCCCcceEEEeCCCC
Confidence 9999999988 21 1 14444444444566667776654
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00031 Score=63.79 Aligned_cols=103 Identities=13% Similarity=0.153 Sum_probs=76.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-----hhhc-------CCceEEEEccCCCHHHHHHhhcC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESF-------GTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-----~~~~-------~~~vevv~GDl~D~~sL~~AL~G 163 (209)
..+++..||||=||.=|+.|++.|+.+||+|..+.|..+.- ..+. +.......||++|...|.+.+.-
T Consensus 25 ~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ 104 (376)
T KOG1372|consen 25 FRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST 104 (376)
T ss_pred cccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc
Confidence 45677899999999999999999999999999999876532 1111 23467889999999999998865
Q ss_pred C--cEEEEc-C-------------------hhH--HHHHHHhCCC---CEEEEecccccccC
Q 028418 164 V--RSIICP-S-------------------EGF--ISNAGSLKGV---QHVILLSQRQRWHS 198 (209)
Q Consensus 164 v--DaVIh~-a-------------------~g~--ll~AA~~aGV---kriV~vSS~~Vyg~ 198 (209)
+ +-|+|+ + .|+ +++|.+..++ -||--.|+...||-
T Consensus 105 ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGk 166 (376)
T KOG1372|consen 105 IKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGK 166 (376)
T ss_pred cCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhccc
Confidence 4 445555 1 234 7888766655 34666788888873
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00015 Score=67.48 Aligned_cols=86 Identities=12% Similarity=0.046 Sum_probs=66.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (209)
...++|-|||||.|..++++|..+|..-....||..+.. ..++ -++...++.+|+.+++.+.++++|++|.
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG--~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt 83 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG--PEAAVFPLGVPAALEAMASRTQVVLNCVGPYT 83 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC--ccccccCCCCHHHHHHHHhcceEEEecccccc
Confidence 346999999999999999999999999977779887764 2334 3455566777999999999999999992
Q ss_pred -hhH-HHHHHHhCCCCE
Q 028418 172 -EGF-ISNAGSLKGVQH 186 (209)
Q Consensus 172 -~g~-ll~AA~~aGVkr 186 (209)
.|. ++++|..+|+..
T Consensus 84 ~~g~plv~aC~~~GTdY 100 (382)
T COG3268 84 RYGEPLVAACAAAGTDY 100 (382)
T ss_pred ccccHHHHHHHHhCCCe
Confidence 232 677777666543
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0002 Score=60.61 Aligned_cols=78 Identities=8% Similarity=0.049 Sum_probs=58.3
Q ss_pred HHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc----CCcEEEEcC----------------hhH
Q 028418 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPS----------------EGF 174 (209)
Q Consensus 115 VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~----GvDaVIh~a----------------~g~ 174 (209)
++++|+++|++|.+++|+.++.. ..+++++|++|.+++.++++ ++|+|||++ .++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~ 75 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGL 75 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHH
Confidence 46889999999999999876532 14678999999999998886 589999982 011
Q ss_pred --HHHHHHhC--CCCEEEEeccccccc
Q 028418 175 --ISNAGSLK--GVQHVILLSQRQRWH 197 (209)
Q Consensus 175 --ll~AA~~a--GVkriV~vSS~~Vyg 197 (209)
+++++... .-.+||++||...++
T Consensus 76 ~~l~~~~~~~~~~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 76 RHLTEALLPRMAPGGAIVNVASLAGAE 102 (241)
T ss_pred HHHHHHHHHhccCCcEEEEeCcHHhhc
Confidence 34444321 226999999998875
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00049 Score=56.05 Aligned_cols=88 Identities=10% Similarity=0.022 Sum_probs=72.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc--C---hh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP--S---EG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~--a---~g 173 (209)
.++|++.|.. .|.+++..|.+.|++|.+++.++..........++++.+|+.+|+ .+.-+++|.|+.. . .-
T Consensus 17 ~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp~el~~ 92 (134)
T PRK04148 17 NKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRDLQP 92 (134)
T ss_pred CCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHHHHH
Confidence 4689999965 787899999999999999999998665444456899999999998 5667899999987 2 33
Q ss_pred HHHHHHHhCCCCEEEEe
Q 028418 174 FISNAGSLKGVQHVILL 190 (209)
Q Consensus 174 ~ll~AA~~aGVkriV~v 190 (209)
.+++.|++.++.-+|.-
T Consensus 93 ~~~~la~~~~~~~~i~~ 109 (134)
T PRK04148 93 FILELAKKINVPLIIKP 109 (134)
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 48999999999877763
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00077 Score=59.15 Aligned_cols=82 Identities=16% Similarity=0.058 Sum_probs=55.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEE-eCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--hh-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--EG- 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLv-R~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a--~g- 173 (209)
+++|+|+|++|.+|+.+++.+.+ .+.++++++ ++++..... -..++...+.+.++++++|+||.+. ..
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~t~p~~~ 73 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDFTTPEAT 73 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEECCCHHHH
Confidence 36899999999999999988876 478888866 444433221 1123333445667777899999762 22
Q ss_pred -HHHHHHHhCCCCEE
Q 028418 174 -FISNAGSLKGVQHV 187 (209)
Q Consensus 174 -~ll~AA~~aGVkri 187 (209)
.++.+|.++|+.-+
T Consensus 74 ~~~~~~al~~G~~vv 88 (257)
T PRK00048 74 LENLEFALEHGKPLV 88 (257)
T ss_pred HHHHHHHHHcCCCEE
Confidence 26777888885443
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00049 Score=64.62 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=55.6
Q ss_pred CCCCeEEEEcC----------------CCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh
Q 028418 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160 (209)
Q Consensus 97 ~~~~~ILVTGA----------------TGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A 160 (209)
..+++|||||| +|.+|.+++++|..+|++|.++.++... . .+.+ +...|+++.+.+.++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~--~~~~--~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P--TPAG--VKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c--CCCC--cEEEccCCHHHHHHH
Confidence 45789999999 9999999999999999999999987632 1 1222 345699998888877
Q ss_pred h----cCCcEEEEc
Q 028418 161 L----RGVRSIICP 170 (209)
Q Consensus 161 L----~GvDaVIh~ 170 (209)
+ ..+|.+||+
T Consensus 261 v~~~~~~~DilI~~ 274 (399)
T PRK05579 261 VLAALPQADIFIMA 274 (399)
T ss_pred HHHhcCCCCEEEEc
Confidence 7 468999998
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00064 Score=64.20 Aligned_cols=71 Identities=18% Similarity=0.259 Sum_probs=54.9
Q ss_pred CCeEEEEcCCCHHHHH--HHHHHHHCCCcEEEEEeCCcc---------------hh---hhcCCceEEEEccCCCHHHHH
Q 028418 99 RDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRN---------------AM---ESFGTYVESMAGDASNKKFLK 158 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~--VV~~Ll~~G~~VraLvR~~~~---------------a~---~~~~~~vevv~GDl~D~~sL~ 158 (209)
.+++|||||++.+|.. ++++| .+|.+|.++.+...+ .. ...+..+..+.+|+++++.+.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 4699999999999999 89999 999999998853311 11 112334667899999999887
Q ss_pred Hhhc-------CCcEEEEc
Q 028418 159 TALR-------GVRSIICP 170 (209)
Q Consensus 159 ~AL~-------GvDaVIh~ 170 (209)
++++ .+|.|||.
T Consensus 120 ~lie~I~e~~G~IDiLVnS 138 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYS 138 (398)
T ss_pred HHHHHHHHhcCCCCEEEEC
Confidence 7653 58999998
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00087 Score=65.93 Aligned_cols=71 Identities=18% Similarity=0.206 Sum_probs=60.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
++.|+|.| -|.+|+.+++.|.++|++++++.+|+++.+.....+..++.||.+|++.|++| ++.++.||.+
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 56788887 58899999999999999999999999877655445688999999999999865 5788999987
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00042 Score=63.21 Aligned_cols=62 Identities=16% Similarity=0.177 Sum_probs=46.5
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCC--cchhhhcCCceEEEEccCCCH-----------HHHHHh
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDK--RNAMESFGTYVESMAGDASNK-----------KFLKTA 160 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~--~~a~~~~~~~vevv~GDl~D~-----------~sL~~A 160 (209)
+|.||||+|+||+.++..|..++. +++.+++++ +. .+....|+.|. ....++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~--------~~g~~~Dl~d~~~~~~~~~~i~~~~~~~ 73 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA--------LEGVVMELQDCAFPLLKGVVITTDPEEA 73 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc--------cceeeeehhhhcccccCCcEEecChHHH
Confidence 799999999999999998887552 588888765 32 22333444443 355789
Q ss_pred hcCCcEEEEc
Q 028418 161 LRGVRSIICP 170 (209)
Q Consensus 161 L~GvDaVIh~ 170 (209)
++|+|.|||+
T Consensus 74 ~~~aDiVVit 83 (323)
T cd00704 74 FKDVDVAILV 83 (323)
T ss_pred hCCCCEEEEe
Confidence 9999999998
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00051 Score=62.64 Aligned_cols=87 Identities=15% Similarity=0.100 Sum_probs=53.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCCc-------------eEEEEccCCCHHHHHHhhcCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTY-------------VESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~~-------------vevv~GDl~D~~sL~~AL~GvD 165 (209)
++|+|+||||++|++|++.|.++. .++.+++++...+....... .+...-++ +++ .+.++|
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D 75 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV----ASKDVD 75 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----HhccCC
Confidence 479999999999999999888866 68888865443221111100 01111111 222 457899
Q ss_pred EEEEcC-hh---HHHHHHHhCCCCEEEEecc
Q 028418 166 SIICPS-EG---FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 166 aVIh~a-~g---~ll~AA~~aGVkriV~vSS 192 (209)
.||.+. .+ .+.+++.++|++ +|-+|+
T Consensus 76 vVf~a~p~~~s~~~~~~~~~~G~~-VIDlsg 105 (341)
T TIGR00978 76 IVFSALPSEVAEEVEPKLAEAGKP-VFSNAS 105 (341)
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCE-EEECCh
Confidence 999872 22 256777788876 444554
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00043 Score=60.08 Aligned_cols=70 Identities=26% Similarity=0.293 Sum_probs=59.4
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhcCC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGV 164 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~Gv 164 (209)
.......||||||--.||+.++.+|...|.+|.++.|+++....+ .+.-++.+++|+.+.+.+.+++.-+
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v 75 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPV 75 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhccc
Confidence 345678999999999999999999999999999999999876543 2333899999999999999998643
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00066 Score=53.36 Aligned_cols=85 Identities=15% Similarity=0.067 Sum_probs=53.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEeCCc-chh-----hhc---CCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKR-NAM-----ESF---GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR~~~-~a~-----~~~---~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
++|+|.|++|.+|+.+++.+.+ .++++.+.+.... ... ... ..++.+ .+.+.++++.+|+||.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v-------~~~l~~~~~~~DVvID 73 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV-------TDDLEELLEEADVVID 73 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE-------BS-HHHHTTH-SEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCccccc-------chhHHHhcccCCEEEE
Confidence 4799999999999999999998 7899877774333 111 011 111111 1456777877999987
Q ss_pred cC--hh--HHHHHHHhCCCCEEEEec
Q 028418 170 PS--EG--FISNAGSLKGVQHVILLS 191 (209)
Q Consensus 170 ~a--~g--~ll~AA~~aGVkriV~vS 191 (209)
.. .. ..++.|.++|+.-++-++
T Consensus 74 fT~p~~~~~~~~~~~~~g~~~ViGTT 99 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKHGVPLVIGTT 99 (124)
T ss_dssp ES-HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred cCChHHhHHHHHHHHhCCCCEEEECC
Confidence 73 22 267777888877666554
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00051 Score=63.00 Aligned_cols=97 Identities=14% Similarity=0.118 Sum_probs=71.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCHHH----HHHhhcCCcEE-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKF----LKTALRGVRSI- 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~~s----L~~AL~GvDaV- 167 (209)
.=..|||||..||+..+++|..+|.+|..+.|+.++... ...-.+.++..|+++++. +.+.|.+.|.=
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 457899999999999999999999999999999987632 122346789999998775 77777777763
Q ss_pred -EEc-C-------------hh------------H------HHHHHHhCCCCEEEEecccccc
Q 028418 168 -ICP-S-------------EG------------F------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 168 -Ih~-a-------------~g------------~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
|.+ . .+ + ++.-+.+.+-.-||.+||.+-.
T Consensus 130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~ 191 (312)
T KOG1014|consen 130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL 191 (312)
T ss_pred EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc
Confidence 333 1 10 0 3444566677789999886543
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00043 Score=61.61 Aligned_cols=66 Identities=14% Similarity=0.031 Sum_probs=54.9
Q ss_pred CCCeEEEEcC-CCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhcC
Q 028418 98 ARDAVLVTDG-DSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 98 ~~~~ILVTGA-TGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~G 163 (209)
..+.|||||+ .|.||..|++.+.++|+.|.|..|+.++...+. ..++.....|+++++.+.+....
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~e 73 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGE 73 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHH
Confidence 3457888875 699999999999999999999999998765543 45688899999999998887643
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00037 Score=56.70 Aligned_cols=64 Identities=9% Similarity=-0.034 Sum_probs=45.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|++|.+.|- |.+|+.+++.|+++||+|.+..|++++.......+++.+ ++..++++.+|+||.+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAEQADVVILC 64 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHHHBSEEEE-
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-------hhhhhHhhcccceEee
Confidence 578999987 999999999999999999999999887765443333332 2345566666777765
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00052 Score=57.76 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=52.3
Q ss_pred cCC--CHHHHHHHHHHHHCCCcEEEEEeCCcch----hhhc-CCceEEEEccCCCHHHHHHhh--------cCCcEEEEc
Q 028418 106 DGD--SDIGQMVILSLIVKRTRIKALVKDKRNA----MESF-GTYVESMAGDASNKKFLKTAL--------RGVRSIICP 170 (209)
Q Consensus 106 GAT--GfIG~~VV~~Ll~~G~~VraLvR~~~~a----~~~~-~~~vevv~GDl~D~~sL~~AL--------~GvDaVIh~ 170 (209)
|++ +.||+.++++|+++|++|.+..|+.++. .... ..+.+++..|++|++++.+++ ..+|.+||+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 666 9999999999999999999999999863 1111 123567999999999888874 467999987
|
... |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0019 Score=57.86 Aligned_cols=68 Identities=9% Similarity=0.023 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++++|+|+ |.+|+.+++.|...|.+|.+..|++++.......+.+.+ +.+.+.+.++++|.||.+
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDiVint 216 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-----PLNKLEEKVAEIDIVINT 216 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-----cHHHHHHHhccCCEEEEC
Confidence 34679999998 889999999999999999999998865433222222222 245577888999999976
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0031 Score=57.90 Aligned_cols=99 Identities=13% Similarity=0.174 Sum_probs=69.8
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc---------------------chh------hhcCCc--eE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---------------------NAM------ESFGTY--VE 145 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~---------------------~a~------~~~~~~--ve 145 (209)
.....+|||.|+ |-+|+++++.|...|+ ++++++++.- ++. ....++ ++
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 445678999997 6699999999999998 6777777641 111 111233 56
Q ss_pred EEEccCCCHHHHHHhhcCCcEEEEcChh-----HHHHHHHhCCCCEEEEeccccccc
Q 028418 146 SMAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 146 vv~GDl~D~~sL~~AL~GvDaVIh~a~g-----~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.+..|++ ++.+.+.++++|.||.+.+. .+-++|++.+++ +||.+..+.+|
T Consensus 100 ~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~r~~in~~~~~~~ip-~i~~~~~g~~G 154 (338)
T PRK12475 100 PVVTDVT-VEELEELVKEVDLIIDATDNFDTRLLINDLSQKYNIP-WIYGGCVGSYG 154 (338)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEEecccEE
Confidence 6777775 55788899999999988321 155778888876 67777666555
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0016 Score=60.31 Aligned_cols=81 Identities=16% Similarity=0.129 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-h----hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A----MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a----~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
..++|+|+|+.+ +|..+++.|+++|++|.+..++... . ..+...+++++.+|..+ +.+.++|+||...
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~g 77 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSPG 77 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECCC
Confidence 457899999888 9999999999999999999987532 2 11222357888888876 3467899999872
Q ss_pred ---hhHHHHHHHhCCC
Q 028418 172 ---EGFISNAGSLKGV 184 (209)
Q Consensus 172 ---~g~ll~AA~~aGV 184 (209)
....+.+|++.|+
T Consensus 78 ~~~~~~~~~~a~~~~i 93 (450)
T PRK14106 78 VPLDSPPVVQAHKKGI 93 (450)
T ss_pred CCCCCHHHHHHHHCCC
Confidence 1125566666554
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00038 Score=59.19 Aligned_cols=65 Identities=18% Similarity=0.128 Sum_probs=48.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCC--------ce--EEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--------YV--ESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~--------~v--evv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
|+|.|+|++|.+|+.++..|.++||+|.+..|++++....... ++ .+.. . ...++++.+|.||.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~---~---~~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG---A---DNAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE---e---ChHHHHhcCCEEEE
Confidence 5799999999999999999999999999999988765432110 11 1111 1 22567889999998
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 75 a 75 (219)
T TIGR01915 75 A 75 (219)
T ss_pred E
Confidence 7
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.004 Score=54.90 Aligned_cols=72 Identities=21% Similarity=0.229 Sum_probs=56.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCC--ceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGT--YVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~--~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
.+..+||||+..||+.|...|..+|++|.+..++...++. .++. +--.+.+|+.+++.++..|+ -.+.
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 4578999999999999999999999999999988865542 2332 34568999999998877554 3577
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
++.|
T Consensus 94 lVnc 97 (256)
T KOG1200|consen 94 LVNC 97 (256)
T ss_pred EEEc
Confidence 7777
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0039 Score=57.29 Aligned_cols=101 Identities=18% Similarity=0.245 Sum_probs=71.9
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCC---------------------cchh------hhcCCc--e
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---------------------RNAM------ESFGTY--V 144 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~---------------------~~a~------~~~~~~--v 144 (209)
+...+.+|||.|+ |.+|+.++..|...|. ++++++++. .++. ....+. +
T Consensus 20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v 98 (339)
T PRK07688 20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV 98 (339)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence 3455778999998 8999999999999998 788888763 1111 111233 4
Q ss_pred EEEEccCCCHHHHHHhhcCCcEEEEcCh--h---HHHHHHHhCCCCEEEEecccccccC
Q 028418 145 ESMAGDASNKKFLKTALRGVRSIICPSE--G---FISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 145 evv~GDl~D~~sL~~AL~GvDaVIh~a~--g---~ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+.+..+++ ++.+.+.++++|.||.+.+ . .+-++|.+.++. +||.++.+.+|.
T Consensus 99 ~~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~~r~~ln~~~~~~~iP-~i~~~~~g~~G~ 155 (339)
T PRK07688 99 EAIVQDVT-AEELEELVTGVDLIIDATDNFETRFIVNDAAQKYGIP-WIYGACVGSYGL 155 (339)
T ss_pred EEEeccCC-HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEeeeeeeeE
Confidence 56666765 4567788999999998832 1 267788888865 788887776654
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00093 Score=60.98 Aligned_cols=64 Identities=17% Similarity=0.118 Sum_probs=46.6
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCCcchhhhcCCceEEEEccCCCHH-----------HHHHhhc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESFGTYVESMAGDASNKK-----------FLKTALR 162 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~~~a~~~~~~~vevv~GDl~D~~-----------sL~~AL~ 162 (209)
+|.|+||+|+||++++..|..++. +++.+++++.... .+....|+.|.. ...++++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~------a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV------LEGVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc------cceeEeehhcccchhcCceeccCChHHHhC
Confidence 589999999999999999987553 5888887554311 122344444443 3468999
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|.|||+
T Consensus 75 ~aDiVVit 82 (324)
T TIGR01758 75 DVDVAILV 82 (324)
T ss_pred CCCEEEEc
Confidence 99999998
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0042 Score=58.32 Aligned_cols=69 Identities=19% Similarity=0.251 Sum_probs=57.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
++.++|.|. |.+|+.++++|.++|++|+++..+.. +.....+..++.||.+|++.|++| ++.+++|+.+
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~ 309 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL--EHRLPDDADLIPGDSSDSAVLKKAGAARARAILAL 309 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh--hhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence 567888886 68999999999999999999986532 334445688999999999999876 5789999987
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00078 Score=53.54 Aligned_cols=71 Identities=21% Similarity=0.277 Sum_probs=53.8
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhh---c-CCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMES---F-GTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~---~-~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
..+...+++||.|| |.+|+.++..|...|.+ |.++.|+.+++..+ + +..++++. +. .+.+++..+|.||
T Consensus 7 ~~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~--~~---~~~~~~~~~DivI 80 (135)
T PF01488_consen 7 FGDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP--LE---DLEEALQEADIVI 80 (135)
T ss_dssp HSTGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE--GG---GHCHHHHTESEEE
T ss_pred cCCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee--HH---HHHHHHhhCCeEE
Confidence 34667889999998 88999999999999987 99999998877543 2 12244443 33 4557889999999
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
++
T Consensus 81 ~a 82 (135)
T PF01488_consen 81 NA 82 (135)
T ss_dssp E-
T ss_pred Ee
Confidence 98
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0038 Score=53.77 Aligned_cols=93 Identities=16% Similarity=0.107 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC-HHHHHHhhcCCcEEEEcChh---
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEG--- 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D-~~sL~~AL~GvDaVIh~a~g--- 173 (209)
+..++||+||+|.+|..+++.+...|.+|.+++|++++.......++..+. +..+ .+.+.+. .++|.||++..+
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~d~v~~~~g~~~~ 239 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVI-DGSKFSEDVKKL-GGADVVIELVGSPTI 239 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEE-ecHHHHHHHHhc-cCCCEEEECCChHHH
Confidence 466899999999999999999999999999999877654322111222111 2222 2233333 389999987321
Q ss_pred -HHHHHHHhCCCCEEEEecccc
Q 028418 174 -FISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 174 -~ll~AA~~aGVkriV~vSS~~ 194 (209)
..+++.... .++|.++...
T Consensus 240 ~~~~~~~~~~--g~~v~~g~~~ 259 (332)
T cd08259 240 EESLRSLNKG--GRLVLIGNVT 259 (332)
T ss_pred HHHHHHhhcC--CEEEEEcCCC
Confidence 133333333 4688776543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0063 Score=53.86 Aligned_cols=89 Identities=16% Similarity=0.131 Sum_probs=71.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC-----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS----- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a----- 171 (209)
+++|||.|||+- |+.|++.|.++|++|.+-+-...... ....+.++.|-+.|.+.+.+-++ ++++||-..
T Consensus 2 ~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~~--~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~ 78 (248)
T PRK08057 2 MPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGGP--ADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAA 78 (248)
T ss_pred CceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCCc--ccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHH
Confidence 578999999985 89999999999999998886554331 12357889999999999999996 889999662
Q ss_pred --hhHHHHHHHhCCCCEEEEe
Q 028418 172 --EGFISNAGSLKGVQHVILL 190 (209)
Q Consensus 172 --~g~ll~AA~~aGVkriV~v 190 (209)
..++.++|++.++..+=|.
T Consensus 79 ~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 79 QISANAAAACRALGIPYLRLE 99 (248)
T ss_pred HHHHHHHHHHHHhCCcEEEEe
Confidence 2348899999999888776
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0026 Score=58.23 Aligned_cols=68 Identities=15% Similarity=0.195 Sum_probs=55.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
+++|+|.|+ |.+|+.++..+.+.|++|.+++.++........ -+.+.+|+.|++.+.+..+.||+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a--d~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA--DEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC--ceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 578999998 799999999999999999999976644222222 25677999999999999999998754
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.01 Score=53.23 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=31.9
Q ss_pred cCCCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeC
Q 028418 96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKD 132 (209)
Q Consensus 96 ~~~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~ 132 (209)
+..++++|||||+ .-||+.++++|.++|++|.+..|.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 3457899999995 899999999999999999987643
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0046 Score=57.88 Aligned_cols=88 Identities=16% Similarity=0.103 Sum_probs=54.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH-CCCc---EEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~-~G~~---VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
|.+|.|.||||++|+.+++.|++ +..+ ++.+.... .... .+.. -+....+..|++. ++++|.||.+.
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~-sg~~~~~f~g-~~~~v~~~~~~~~----~~~~Divf~a~~ 74 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQ-AGGAAPSFGG-KEGTLQDAFDIDA----LKKLDIIITCQG 74 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchh-hCCcccccCC-CcceEEecCChhH----hcCCCEEEECCC
Confidence 46799999999999999985554 5666 67655322 1111 1221 1233444555443 47899999973
Q ss_pred hhH---HHHHHHhCCCC-EEEEecc
Q 028418 172 EGF---ISNAGSLKGVQ-HVILLSQ 192 (209)
Q Consensus 172 ~g~---ll~AA~~aGVk-riV~vSS 192 (209)
.+. +...+.++|++ .+|=.||
T Consensus 75 ~~~s~~~~~~~~~aG~~~~VID~Ss 99 (369)
T PRK06598 75 GDYTNEVYPKLRAAGWQGYWIDAAS 99 (369)
T ss_pred HHHHHHHHHHHHhCCCCeEEEECCh
Confidence 222 66667778885 4555554
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0067 Score=55.09 Aligned_cols=95 Identities=12% Similarity=0.101 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhhc--CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTALR--GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL~--GvDaVIh~a 171 (209)
.+.++|||+||+|-+|+..++.+...|+.+.+.+.+.++.......+.+.+. |+.+.+ .+++... |+|.||.+.
T Consensus 141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi-~y~~~~~~~~v~~~t~g~gvDvv~D~v 219 (326)
T COG0604 141 KPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVI-NYREEDFVEQVRELTGGKGVDVVLDTV 219 (326)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEE-cCCcccHHHHHHHHcCCCCceEEEECC
Confidence 4478999999999999999998889998888888766554433222332222 244433 3334443 699999883
Q ss_pred -hhH---HHHHHHhCCCCEEEEecccc
Q 028418 172 -EGF---ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 -~g~---ll~AA~~aGVkriV~vSS~~ 194 (209)
..+ .+++ ...+ .++|.+...+
T Consensus 220 G~~~~~~~l~~-l~~~-G~lv~ig~~~ 244 (326)
T COG0604 220 GGDTFAASLAA-LAPG-GRLVSIGALS 244 (326)
T ss_pred CHHHHHHHHHH-hccC-CEEEEEecCC
Confidence 222 2323 3445 6777765543
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0021 Score=56.13 Aligned_cols=86 Identities=10% Similarity=0.132 Sum_probs=57.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh----hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~----~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (209)
||+...++||.||+.++++|...||+|..-.|+.++... .+.+. --..+..+|.+.+|+||...
T Consensus 1 m~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~--------i~~~~~~dA~~~aDVVvLAVP~~a 72 (211)
T COG2085 1 MMIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL--------ITGGSNEDAAALADVVVLAVPFEA 72 (211)
T ss_pred CcEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc--------cccCChHHHHhcCCEEEEeccHHH
Confidence 466777899999999999999999999999766654322 22222 22335678999999999872
Q ss_pred -hhHHHHHHHhCCCCEEEEecccc
Q 028418 172 -EGFISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 -~g~ll~AA~~aGVkriV~vSS~~ 194 (209)
.+++-+.....+ .+||.-.+-.
T Consensus 73 ~~~v~~~l~~~~~-~KIvID~tnp 95 (211)
T COG2085 73 IPDVLAELRDALG-GKIVIDATNP 95 (211)
T ss_pred HHhHHHHHHHHhC-CeEEEecCCC
Confidence 222333333345 5777555443
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0026 Score=58.91 Aligned_cols=72 Identities=11% Similarity=0.032 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+..+|+|.|+ |-+|+.+++.|...|.+|.++.|++++...........+..+..+++.+.++++++|.||.+
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGA 237 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEc
Confidence 3456999987 99999999999999999999999876644321111122345667888999999999999987
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0014 Score=51.57 Aligned_cols=69 Identities=16% Similarity=0.067 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..++|+|+|+ |.+|+.+++.|...| ++|.+..|++++....... ....+..+..+ ..++++++|.||.+
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~ 88 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINT 88 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeC
Confidence 3568999998 999999999999986 8899999988765432110 11111223333 34458899999988
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0066 Score=54.04 Aligned_cols=71 Identities=18% Similarity=0.277 Sum_probs=53.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHH-CCCcEE-EEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc---------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIV-KRTRIK-ALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--------- 162 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~-~G~~Vr-aLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~--------- 162 (209)
+.|+||||+-.||--||++|+. .|.++. +..|+++++... ..+++.+++.|+++-+++.++.+
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 3599999999999999999986 455554 445778874321 25789999999999999888864
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
|++.+|..
T Consensus 84 GlnlLinN 91 (249)
T KOG1611|consen 84 GLNLLINN 91 (249)
T ss_pred CceEEEec
Confidence 55666554
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0012 Score=53.11 Aligned_cols=91 Identities=13% Similarity=0.104 Sum_probs=49.4
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Ch
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SE 172 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (209)
.+.++.+|-|.|| |.+|.+|.+.|.++||+|..+. |+.+.+..... . .++ .....+.+.++.+|.+|.+ .+
T Consensus 6 ~~~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~----~-~~~-~~~~~~~~~~~~aDlv~iavpD 78 (127)
T PF10727_consen 6 TQAARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAA----F-IGA-GAILDLEEILRDADLVFIAVPD 78 (127)
T ss_dssp ------EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT------TTGGGCC-SEEEE-S-C
T ss_pred cCCCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccc----c-ccc-ccccccccccccCCEEEEEech
Confidence 4778899999998 9999999999999999998875 66544432211 0 011 1112345678899999987 23
Q ss_pred hH---HHHHHHhC----CCCEEEEecc
Q 028418 173 GF---ISNAGSLK----GVQHVILLSQ 192 (209)
Q Consensus 173 g~---ll~AA~~a----GVkriV~vSS 192 (209)
.. +.+..... .=+-|||+|-
T Consensus 79 daI~~va~~La~~~~~~~g~iVvHtSG 105 (127)
T PF10727_consen 79 DAIAEVAEQLAQYGAWRPGQIVVHTSG 105 (127)
T ss_dssp CHHHHHHHHHHCC--S-TT-EEEES-S
T ss_pred HHHHHHHHHHHHhccCCCCcEEEECCC
Confidence 22 33333332 1145677774
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.011 Score=53.06 Aligned_cols=67 Identities=10% Similarity=0.033 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..++++|.|+ |.+|+.++..|...|.+|.+..|++++.......+.+++ +.+.+.+.++++|.||.+
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t 217 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNT 217 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEEC
Confidence 4679999997 889999999999999999999998765432222233332 235677889999999987
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0039 Score=50.19 Aligned_cols=64 Identities=17% Similarity=0.234 Sum_probs=47.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhh----------hcCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~----------~~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
++|.|+||+|.+|++++..|..++ .+++.+++++.++.. .....+.+..++ .++++++|.|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccccEE
Confidence 589999999999999999998876 579999988654421 111223333333 5679999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|.+
T Consensus 74 vit 76 (141)
T PF00056_consen 74 VIT 76 (141)
T ss_dssp EET
T ss_pred EEe
Confidence 998
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0069 Score=55.03 Aligned_cols=70 Identities=11% Similarity=0.108 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
.+++|||+|+ |..|+.++..+.+.|++|.++..++........ -..+..|..|++.+.+.++ ++|.|+..
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSHVIDMLDGDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh--hheEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence 4568999986 789999999999999999999987754322221 1357788999999999988 89999865
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.015 Score=54.07 Aligned_cols=89 Identities=18% Similarity=0.190 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHH-CCCc---EEEEEeCCcchhh-hcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~-~G~~---VraLvR~~~~a~~-~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a 171 (209)
+..+|.|.||||++|+.+++.|.+ ...+ ++.+....+.-+. .+.. -+...-++ |++ .+.++|.||.+ .
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~-~~l~v~~~-~~~----~~~~~Divf~a~~ 77 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG-REIIIQEA-KIN----SFEGVDIAFFSAG 77 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC-cceEEEeC-CHH----HhcCCCEEEECCC
Confidence 346899999999999999998884 6777 6666633221111 1211 12333333 333 35789999987 2
Q ss_pred hhH---HHHHHHhCCCCEEEEeccc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
.+. ++..+.++|. .+|=.|+.
T Consensus 78 ~~~s~~~~~~~~~~G~-~VID~Ss~ 101 (347)
T PRK06728 78 GEVSRQFVNQAVSSGA-IVIDNTSE 101 (347)
T ss_pred hHHHHHHHHHHHHCCC-EEEECchh
Confidence 332 5666667773 45555553
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0039 Score=55.02 Aligned_cols=93 Identities=12% Similarity=0.058 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCH----HHHHHhh-cCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNK----KFLKTAL-RGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~----~sL~~AL-~GvDaVIh~ 170 (209)
.+.++|||+||+|.+|..+++.+...|.+|.++++++++...... .+++.+ .|..+. +.+.+.. .|+|.||.+
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~ 228 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDN 228 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence 456799999999999999999888999999999988776543211 123222 122221 2223222 479999987
Q ss_pred ChhH----HHHHHHhCCCCEEEEecc
Q 028418 171 SEGF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 171 a~g~----ll~AA~~aGVkriV~vSS 192 (209)
..+. .++..+.. .+||.++.
T Consensus 229 ~g~~~~~~~~~~l~~~--G~iv~~G~ 252 (338)
T cd08295 229 VGGKMLDAVLLNMNLH--GRIAACGM 252 (338)
T ss_pred CCHHHHHHHHHHhccC--cEEEEecc
Confidence 3222 33333333 46776653
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0037 Score=55.82 Aligned_cols=73 Identities=21% Similarity=0.226 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh------hhc-CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESF-GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~------~~~-~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++.++|||+.|.||..+..+|+++|..+.++.-+.+..+ ... ...+-+++.|+++...++++++ .
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 3678999999999999999999999999988886555432 111 1347899999999999999986 4
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+|.-
T Consensus 84 iDIlINg 90 (261)
T KOG4169|consen 84 IDILING 90 (261)
T ss_pred eEEEEcc
Confidence 5888865
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0092 Score=54.66 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=50.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF-- 174 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~-- 174 (209)
+.+|.|.||||++|+.+++.|.++. .++..+..+..+ ++.+ ....+.++|.||.+ ..+.
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------~~~~---~~~~~~~~DvvFlalp~~~s~ 64 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------DAAA---RRELLNAADVAILCLPDDAAR 64 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------cccC---chhhhcCCCEEEECCCHHHHH
Confidence 4589999999999999999777654 355555433222 1111 23456789999987 3333
Q ss_pred -HHHHHHhCCCCEEEEeccc
Q 028418 175 -ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 -ll~AA~~aGVkriV~vSS~ 193 (209)
++..+.+.|+ +||=+|+.
T Consensus 65 ~~~~~~~~~g~-~VIDlSad 83 (313)
T PRK11863 65 EAVALIDNPAT-RVIDASTA 83 (313)
T ss_pred HHHHHHHhCCC-EEEECChh
Confidence 5566666775 47777753
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0038 Score=54.04 Aligned_cols=60 Identities=7% Similarity=0.093 Sum_probs=42.9
Q ss_pred EcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-------cCCcEEEEc
Q 028418 105 TDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICP 170 (209)
Q Consensus 105 TGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-------~GvDaVIh~ 170 (209)
-.+||.||++++++|.++|++|.++.|... .. .. .....|+.|.+++.+.+ ..+|++||+
T Consensus 21 N~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~-~~----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn 87 (227)
T TIGR02114 21 NHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK-PE----PHPNLSIREIETTKDLLITLKELVQEHDILIHS 87 (227)
T ss_pred CCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc-cc----cCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 345999999999999999999998876321 11 10 11346888877766543 468999998
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0069 Score=56.88 Aligned_cols=69 Identities=13% Similarity=0.109 Sum_probs=53.1
Q ss_pred CCCCeEEEEcC----------------CCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHH-HH
Q 028418 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL-KT 159 (209)
Q Consensus 97 ~~~~~ILVTGA----------------TGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL-~~ 159 (209)
...++|||||+ ||.+|..+++.|..+|++|.++.++.... .+.+ +...|+.+.+.+ .+
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~~~--~~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---TPPG--VKSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---CCCC--cEEEEeccHHHHHHH
Confidence 45689999999 57899999999999999999998766432 2222 356788888887 43
Q ss_pred hh----cCCcEEEEc
Q 028418 160 AL----RGVRSIICP 170 (209)
Q Consensus 160 AL----~GvDaVIh~ 170 (209)
++ ..+|++|++
T Consensus 258 ~~~~~~~~~D~~i~~ 272 (390)
T TIGR00521 258 ALNELAKDFDIFISA 272 (390)
T ss_pred HHHhhcccCCEEEEc
Confidence 44 368999998
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.026 Score=49.95 Aligned_cols=90 Identities=17% Similarity=0.125 Sum_probs=68.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a---- 171 (209)
|+|||.|||+- |+.|+..|.++|+ |.+-+-....... ......+++.|-+.|.+.+.+-++ +++.||-.+
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA 78 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFA 78 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchH
Confidence 68999999986 7899999999999 6655533322221 122457899999999999999995 899999662
Q ss_pred ---hhHHHHHHHhCCCCEEEEec
Q 028418 172 ---EGFISNAGSLKGVQHVILLS 191 (209)
Q Consensus 172 ---~g~ll~AA~~aGVkriV~vS 191 (209)
..++.++|++.|+..+-|.=
T Consensus 79 ~~is~na~~a~~~~~ipylR~eR 101 (249)
T PF02571_consen 79 AEISQNAIEACRELGIPYLRFER 101 (249)
T ss_pred HHHHHHHHHHHhhcCcceEEEEc
Confidence 23478899999998877753
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.017 Score=53.31 Aligned_cols=89 Identities=13% Similarity=0.111 Sum_probs=53.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Ch
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP-SE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (209)
...+|.|.||||++|+.+++.|.++.| +++.+..+.+.-+.. +... ++..-++ + ...+.++|.||.+ ..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~-~~~v~~~---~--~~~~~~~Dvvf~a~p~ 76 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGK-SVTVQDA---A--EFDWSQAQLAFFVAGR 76 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCc-ceEEEeC---c--hhhccCCCEEEECCCH
Confidence 456899999999999999998888654 566665432211111 2111 1111132 2 1235789999987 33
Q ss_pred hH---HHHHHHhCCCCEEEEeccc
Q 028418 173 GF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g~---ll~AA~~aGVkriV~vSS~ 193 (209)
+. ++..+.++|+ ++|=+|+.
T Consensus 77 ~~s~~~~~~~~~~g~-~VIDlS~~ 99 (336)
T PRK08040 77 EASAAYAEEATNAGC-LVIDSSGL 99 (336)
T ss_pred HHHHHHHHHHHHCCC-EEEECChH
Confidence 32 5666666776 46666653
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0035 Score=55.17 Aligned_cols=71 Identities=14% Similarity=0.126 Sum_probs=48.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCc--eEEE-----EccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTY--VESM-----AGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~--vevv-----~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|++|.|.|+ |.+|..++..|...|++|.+..|+++........+ .... ...+.-..+..++++++|.||.+
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVA 78 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEe
Confidence 468999985 99999999999999999999999876543221110 0000 00111122455678899999987
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0052 Score=58.12 Aligned_cols=64 Identities=16% Similarity=0.082 Sum_probs=47.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|+|+||+|.+|+.+++.|.++|++|.+..|+++..... ...++++ .....+++.++|.||.+
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIla 65 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIIS 65 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEe
Confidence 5799999999999999999999999999999988664221 1112221 12245677888998877
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0054 Score=56.75 Aligned_cols=35 Identities=17% Similarity=0.399 Sum_probs=32.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~ 133 (209)
.++|.|.||+|.+|+.+++.|..+|++|++..|++
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 46899999999999999999999999999999853
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0027 Score=56.08 Aligned_cols=71 Identities=17% Similarity=0.137 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...+++||+|+ |.+|+.++..|...| .+|.++.|+.+++.......-......+ + ..+.+++..+|.||.+
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~-~~~~~~~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D-LELQEELADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c-ccchhccccCCEEEEC
Confidence 44568999997 999999999999999 7899999998776433210000000111 0 0234567788999887
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.005 Score=55.77 Aligned_cols=101 Identities=13% Similarity=0.060 Sum_probs=70.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc-C--
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP-S-- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~-a-- 171 (209)
.-++|||||+-|.+|.-++..|.. -|-+-+.|..=.++....+. .--++..|+.|...|++.+- -+|.+||. +
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~-~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALL 121 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTD-VGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALL 121 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcc-cCCchhhhhhccccHHHhhcccccceeeeHHHHH
Confidence 456899999999999999987765 36666665521111111221 12367889999999999885 46889997 1
Q ss_pred ----------------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ----------------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ----------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.| ++++.|++...+-|| -|+++++|.+.
T Consensus 122 SAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFV-PSTIGAFGPtS 167 (366)
T KOG2774|consen 122 SAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFV-PSTIGAFGPTS 167 (366)
T ss_pred HHhcccCCceeeeecchhhhHHHHHHHHcCeeEee-cccccccCCCC
Confidence 12 289999999887555 58899988763
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.022 Score=48.24 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=67.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCC-------------------cchh------hhcCCceE--EE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM------ESFGTYVE--SM 147 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~-------------------~~a~------~~~~~~ve--vv 147 (209)
...+.+|||.| .|-+|+++++.|...|. ++++++++. .++. ....++++ .+
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 96 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL 96 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 45567899998 67799999999999997 788888662 1111 11223333 34
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh--h---HHHHHHHhCCCCEEEEeccccccc
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE--G---FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~--g---~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
...+ +++.+.+.++++|.||.+.. . .+-++|++.++. +|+.+..+.+|
T Consensus 97 ~~~i-~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip-~i~~~~~g~~G 149 (202)
T TIGR02356 97 KERV-TAENLELLINNVDLVLDCTDNFATRYLINDACVALGTP-LISAAVVGFGG 149 (202)
T ss_pred hhcC-CHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEeccCeE
Confidence 4444 44667888999999998831 1 266788888864 77777655554
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0037 Score=56.41 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=30.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCc--EEEEEeCC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDK 133 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~--VraLvR~~ 133 (209)
++|.|+||||.+|.+++..|+..|+. |.+++|++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 58999999999999999999999875 99999855
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.012 Score=53.31 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=54.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
+|+|.| +|..|..+++.+.+.|++|.++..++......+. -+.+..|..|++.+.+.++ ++|.|+..
T Consensus 1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~v~~~ 69 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSYVINMLDGDALRAVIEREKPDYIVPE 69 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC--ceEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence 589999 5999999999999999999999987754322222 2566789999999998887 89998864
|
This enzyme is an alternative to PurN (TIGR00639) |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0041 Score=58.31 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=52.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..+.++|+|.|+ |.+|+.+++.|...| .+|.+..|+++++..... -+...+ +.+.+.+++.++|.||.+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-----~~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-----KFEDLEEYLAEADIVISS 247 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-----eHHHHHHHHhhCCEEEEC
Confidence 356689999997 999999999999999 789999998876542211 011222 335678889999999988
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0066 Score=53.18 Aligned_cols=93 Identities=9% Similarity=0.029 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC---HHHHHHhh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTAL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D---~~sL~~AL--~GvDaVIh~a~ 172 (209)
+..+|||+||+|.+|..+++.+...|.+|.++++++++.......+++.+ .|..+ .....+.+ +|+|.||.+.-
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~G 216 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNVG 216 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECCC
Confidence 46799999999999999999888899999999988766443222223222 12222 22222222 37899998732
Q ss_pred h-H---HHHHHHhCCCCEEEEeccc
Q 028418 173 G-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
+ . .++..+ .-.|||.++..
T Consensus 217 ~~~~~~~~~~l~--~~G~iv~~G~~ 239 (325)
T TIGR02825 217 GEFSNTVIGQMK--KFGRIAICGAI 239 (325)
T ss_pred HHHHHHHHHHhC--cCcEEEEecch
Confidence 2 2 222222 22467766543
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.041 Score=54.04 Aligned_cols=77 Identities=12% Similarity=0.143 Sum_probs=59.2
Q ss_pred CCccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+.+++...+++|+|.|+. .+|+.++..+.+.|++|.+++.++......+. -+.+.+|+.|++.+.+..+.+|+|...
T Consensus 14 ~~~~~~~~~k~IgIIGgG-qlg~mla~aA~~lG~~Vi~ld~~~~apa~~~A--D~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 14 VKPVHGVSETVVGVLGGG-QLGRMLCQAASQMGIKVKVLDPLEDCPASSVA--ARHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred CccccCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 334445677899999975 99999999999999999999877653222221 246679999999999988889987543
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0045 Score=55.70 Aligned_cols=68 Identities=19% Similarity=0.121 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.++|+|.|+ |.+|+.+++.|...| .+|.+..|+++++..... -+.. +.+.+.+.+++..+|.||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-----~~~~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-----AVPLDELLELLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-----EEeHHHHHHHHhcCCEEEEC
Confidence 46789999998 999999999998866 678889998876543211 1122 23345678889999999998
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.013 Score=53.69 Aligned_cols=75 Identities=15% Similarity=0.114 Sum_probs=49.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH---
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF--- 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~--- 174 (209)
.+|.|.||||++|..+++.|... ..++..+.-+.. + +..+ ..+.++++|.||.+ ..+.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~-----~---------~~~~---~~~~~~~~D~vFlalp~~~s~~ 64 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR-----K---------DAAE---RAKLLNAADVAILCLPDDAARE 64 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc-----c---------CcCC---HhHhhcCCCEEEECCCHHHHHH
Confidence 47999999999999999988775 345655542211 1 1112 34566889999987 3332
Q ss_pred HHHHHHhCCCCEEEEecc
Q 028418 175 ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ll~AA~~aGVkriV~vSS 192 (209)
++..+.++|+ +||=+|+
T Consensus 65 ~~~~~~~~g~-~VIDlSa 81 (310)
T TIGR01851 65 AVSLVDNPNT-CIIDAST 81 (310)
T ss_pred HHHHHHhCCC-EEEECCh
Confidence 5555666675 4777775
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0057 Score=57.34 Aligned_cols=69 Identities=23% Similarity=0.244 Sum_probs=51.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.++|+|.|+ |.+|+.+++.|...|. +|.+..|+++++...... . .+++.+.+.+.+++.++|.||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~-~---g~~~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE-F---GGEAIPLDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH-c---CCcEeeHHHHHHHhccCCEEEEC
Confidence 46689999987 9999999999999997 788999988765432111 0 01233446677889999999988
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.018 Score=48.90 Aligned_cols=60 Identities=10% Similarity=0.060 Sum_probs=39.0
Q ss_pred cCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh----hcCCcEEEEc
Q 028418 106 DGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICP 170 (209)
Q Consensus 106 GATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A----L~GvDaVIh~ 170 (209)
-+||..|..|++.+..+|++|..+..+.. .. .+.+++++. +...+.+.++ ++.+|++||+
T Consensus 26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~--~p~~~~~i~--v~sa~em~~~~~~~~~~~Di~I~a 89 (185)
T PF04127_consen 26 RSSGKMGAALAEEAARRGAEVTLIHGPSS-LP--PPPGVKVIR--VESAEEMLEAVKELLPSADIIIMA 89 (185)
T ss_dssp S--SHHHHHHHHHHHHTT-EEEEEE-TTS-------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-
T ss_pred CCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc--ccccceEEE--ecchhhhhhhhccccCcceeEEEe
Confidence 35899999999999999999999997642 11 144677766 4555544444 4678999998
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0092 Score=53.16 Aligned_cols=66 Identities=11% Similarity=0.041 Sum_probs=50.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.|.| .|.+|..+++.|.+.|++|.+..|++++.......++.. ..+++.+.++++.+|.||.+
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~ 66 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTG----VANLRELSQRLSAPRVVWVM 66 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcc----cCCHHHHHhhcCCCCEEEEE
Confidence 4788998 599999999999999999999999988765443222221 24666677777888999877
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.016 Score=49.25 Aligned_cols=40 Identities=10% Similarity=0.086 Sum_probs=34.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
...++|+|+|. |.+|+++++.|.+.|++|.+..+++++..
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~ 65 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVA 65 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 45679999998 69999999999999999998888776543
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.032 Score=49.76 Aligned_cols=91 Identities=18% Similarity=0.099 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC---CcchhhhcCCceEEEEccCCCHHHH-HHhhcCCcEEEEcC-h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD---KRNAMESFGTYVESMAGDASNKKFL-KTALRGVRSIICPS-E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~---~~~a~~~~~~~vevv~GDl~D~~sL-~~AL~GvDaVIh~a-~ 172 (209)
+.++|||+|+ |.+|...++.+...|.+|.+++|+ +++......-+++.+ |..+.+.. .....++|.||-+. .
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g~ 248 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEFDLIIEATGV 248 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCCCEEEECcCC
Confidence 5779999986 999999998888899999999983 433322222234443 33322111 12346799999882 2
Q ss_pred h-H---HHHHHHhCCCCEEEEeccc
Q 028418 173 G-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
. . .++..+..| ++|.++..
T Consensus 249 ~~~~~~~~~~l~~~G--~~v~~G~~ 271 (355)
T cd08230 249 PPLAFEALPALAPNG--VVILFGVP 271 (355)
T ss_pred HHHHHHHHHHccCCc--EEEEEecC
Confidence 1 2 344444444 67776543
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.037 Score=47.29 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHH---hh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT---AL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~---AL--~GvDaVIh~a~ 172 (209)
+..++||+|+++-+|..+++.+...|++|.+.+++.++.......+... ..|..+.+.... .. .++|.++++..
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g 244 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVG 244 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCc
Confidence 4678999999999999999999999999999988775543221111221 124455443332 22 36899998732
Q ss_pred hH----HHHHHHhCCCCEEEEeccccc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS~~V 195 (209)
+. .++..+.. .++|.+++...
T Consensus 245 ~~~~~~~~~~l~~~--G~~v~~~~~~~ 269 (342)
T cd08266 245 AATWEKSLKSLARG--GRLVTCGATTG 269 (342)
T ss_pred HHHHHHHHHHhhcC--CEEEEEecCCC
Confidence 21 33443333 57888876543
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.029 Score=43.10 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=51.2
Q ss_pred eEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEe-CCcchh--hhcCCceE-EEEccCCCHHHHHHhhcCCcEEEEc-ChhH
Q 028418 101 AVLVTDGDSDIGQMVILSLIV-KRTRIKALVK-DKRNAM--ESFGTYVE-SMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR-~~~~a~--~~~~~~ve-vv~GDl~D~~sL~~AL~GvDaVIh~-a~g~ 174 (209)
+|.|+|++|.+|+.+++.|.. .++++.+++. +.+... ....+.+. ++..++. ...+. ..++|.||.+ ....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~DvV~~~~~~~~ 77 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELE-PEDFE--ELAVDIVFLALPHGV 77 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccc-cCChh--hcCCCEEEEcCCcHH
Confidence 478999999999999999988 5899999953 322211 11112221 2222332 22333 3589999987 2221
Q ss_pred ---HH---HHHHhCCCCEEEEeccc
Q 028418 175 ---IS---NAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 ---ll---~AA~~aGVkriV~vSS~ 193 (209)
++ ..+.+.| +.+|-+|+.
T Consensus 78 ~~~~~~~~~~~~~~g-~~viD~s~~ 101 (122)
T smart00859 78 SKEIAPLLPKAAEAG-VKVIDLSSA 101 (122)
T ss_pred HHHHHHHHHhhhcCC-CEEEECCcc
Confidence 21 1122444 567777764
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.011 Score=51.41 Aligned_cols=69 Identities=7% Similarity=-0.001 Sum_probs=45.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCC----CHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----NKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~----D~~sL~~AL~GvDaVIh~ 170 (209)
|+|+|.|+ |.+|..++..|.+.|++|.+++|+++........++.+-.++.. -.....++ +.+|.||.+
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila 73 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILA 73 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEe
Confidence 47999997 99999999999999999999999776543222112221011111 01122333 789999887
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.055 Score=46.92 Aligned_cols=96 Identities=16% Similarity=0.156 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccCCCH-HHHHHhh-cCCcEEEEcChh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNK-KFLKTAL-RGVRSIICPSEG 173 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl~D~-~sL~~AL-~GvDaVIh~a~g 173 (209)
.+.++|||+||+|-+|..+++.+...|.+|.++++++++.......++ .++..+-.+. ..+.... +++|.||.+..+
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~ 217 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGG 217 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcH
Confidence 356799999999999999999999999999999987755432211122 2222221121 1222211 478999987322
Q ss_pred H----HHHHHHhCCCCEEEEecccc
Q 028418 174 F----ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 174 ~----ll~AA~~aGVkriV~vSS~~ 194 (209)
. .++..... .++|.+++..
T Consensus 218 ~~~~~~~~~l~~~--g~~v~~g~~~ 240 (329)
T cd08250 218 EMFDTCVDNLALK--GRLIVIGFIS 240 (329)
T ss_pred HHHHHHHHHhccC--CeEEEEeccc
Confidence 2 23333333 4788776554
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.019 Score=50.37 Aligned_cols=70 Identities=11% Similarity=0.109 Sum_probs=47.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhh---cCCceEEEEccCCC-HHHHHHhh-cCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASN-KKFLKTAL-RGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~---~~~~vevv~GDl~D-~~sL~~AL-~GvDaVIh~ 170 (209)
++|||+||+|.+|..+++.+...|. +|.++++++++.... ++. -+++.-+-.+ .+.+.+.. +|+|.||.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa-~~vi~~~~~~~~~~i~~~~~~gvd~vid~ 231 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF-DAAINYKTDNVAERLRELCPEGVDVYFDN 231 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC-cEEEECCCCCHHHHHHHHCCCCceEEEEC
Confidence 7999999999999999998888998 799999887654322 332 1222211112 12233332 479999987
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.028 Score=52.05 Aligned_cols=82 Identities=12% Similarity=0.037 Sum_probs=55.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch----hhhcCCceEEEEccCCCHHHHHHhhc-CCcEEEEc-C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTALR-GVRSIICP-S 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a----~~~~~~~vevv~GDl~D~~sL~~AL~-GvDaVIh~-a 171 (209)
.+++|+|||++| +|..+++.|.++|++|.+..++.... ..+...++++..+... .. .+. ++|.||.. +
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~---~~~~~~d~vV~s~g 77 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LE---LLDEDFDLMVKNPG 77 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HH---HhcCcCCEEEECCC
Confidence 356899999988 99999999999999999998765321 1122234666554422 22 133 48988876 2
Q ss_pred ---hhHHHHHHHhCCCC
Q 028418 172 ---EGFISNAGSLKGVQ 185 (209)
Q Consensus 172 ---~g~ll~AA~~aGVk 185 (209)
...++++|++.|++
T Consensus 78 i~~~~~~~~~a~~~~i~ 94 (447)
T PRK02472 78 IPYTNPMVEKALEKGIP 94 (447)
T ss_pred CCCCCHHHHHHHHCCCc
Confidence 23477777777764
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.038 Score=47.48 Aligned_cols=94 Identities=13% Similarity=0.097 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhh--cCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL--~GvDaVIh~a 171 (209)
.+..+|||+|++|-+|..+++.+...|.+|.++++++++.......++..+ .+..++ ..+.+.. +++|.|+.+.
T Consensus 141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 219 (324)
T cd08244 141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVA-VDYTRPDWPDQVREALGGGGVTVVLDGV 219 (324)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE-EecCCccHHHHHHHHcCCCCceEEEECC
Confidence 356789999999999999999999999999999987765432221222221 123333 2344444 3689999872
Q ss_pred hh-H---HHHHHHhCCCCEEEEeccc
Q 028418 172 EG-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
.+ . .+++.... .++|.++..
T Consensus 220 g~~~~~~~~~~l~~~--g~~v~~g~~ 243 (324)
T cd08244 220 GGAIGRAALALLAPG--GRFLTYGWA 243 (324)
T ss_pred ChHhHHHHHHHhccC--cEEEEEecC
Confidence 22 1 23333333 477777543
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.006 Score=53.77 Aligned_cols=68 Identities=13% Similarity=0.118 Sum_probs=48.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-------CCceEEEEccCC------------CHHHHHHh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDAS------------NKKFLKTA 160 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-------~~~vevv~GDl~------------D~~sL~~A 160 (209)
++|.|.|+ |.+|..++..|..+|++|++..++++...... ..+++ .+.++ -..++.++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVA--RGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHH--cCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 47999998 99999999999999999999999887654321 00110 11111 12346788
Q ss_pred hcCCcEEEEc
Q 028418 161 LRGVRSIICP 170 (209)
Q Consensus 161 L~GvDaVIh~ 170 (209)
++++|.||.+
T Consensus 79 ~~~aD~Vi~a 88 (288)
T PRK09260 79 VADADLVIEA 88 (288)
T ss_pred hcCCCEEEEe
Confidence 9999999977
|
|
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.018 Score=52.03 Aligned_cols=65 Identities=12% Similarity=0.151 Sum_probs=52.3
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
+|+|.|+ |.+|+.++..+.+.|++|.+++.++......+. -+.+.+|+.|++.+.+..+.+|+|.
T Consensus 1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~a--d~~~~~~~~d~~~i~~~a~~~dvit 65 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAVQVA--DHVVLAPFFDPAAIRELAESCDVIT 65 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChhHhC--ceeEeCCCCCHHHHHHHHhhCCEEE
Confidence 5889998 799999999999999999999876643322222 2456889999999999999998764
|
Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. |
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.018 Score=49.70 Aligned_cols=64 Identities=9% Similarity=0.054 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC---CcEEEEEeCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G---~~VraLvR~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.|+ |.+|+.+++.|.+.| ++|.+..|++++....... ++.+ . ....++++.+|.||.+
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~-----~--~~~~~~~~~advVil~ 69 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA-----A--TDNQEAAQEADVVVLA 69 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee-----c--CChHHHHhcCCEEEEE
Confidence 468999985 999999999999998 7899999988765433221 2322 1 1234557789999987
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.044 Score=49.34 Aligned_cols=93 Identities=11% Similarity=0.043 Sum_probs=57.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCC---CH-HHHHHhh-cCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDAS---NK-KFLKTAL-RGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~---D~-~sL~~AL-~GvDaVIh~ 170 (209)
.+.++|||+||+|-+|..+++.+...|.+|.++++++++..... ..+++.+. |.. +. +.+.+.. .|+|.||.+
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi-~~~~~~~~~~~i~~~~~~gvD~v~d~ 235 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAF-NYKEEPDLDAALKRYFPEGIDIYFDN 235 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEE-ECCCcccHHHHHHHHCCCCcEEEEEC
Confidence 35679999999999999999888889999999888776644221 12233222 222 21 2223222 379999987
Q ss_pred ChhH----HHHHHHhCCCCEEEEecc
Q 028418 171 SEGF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 171 a~g~----ll~AA~~aGVkriV~vSS 192 (209)
.-+. .++..+.. .++|.+..
T Consensus 236 vG~~~~~~~~~~l~~~--G~iv~~G~ 259 (348)
T PLN03154 236 VGGDMLDAALLNMKIH--GRIAVCGM 259 (348)
T ss_pred CCHHHHHHHHHHhccC--CEEEEECc
Confidence 3222 23333333 46776654
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.021 Score=52.84 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=70.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCH---HHHHHhh-cCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNK---KFLKTAL-RGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~---~sL~~AL-~GvDaVIh~ 170 (209)
..+..+|+|++|+|-+|+.+.+-..-+|.+|+.++=.+++-..... .+.+ ...|..+. ..|.+|+ +|+|..|-+
T Consensus 148 pk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD-~~idyk~~d~~~~L~~a~P~GIDvyfeN 226 (340)
T COG2130 148 PKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD-AGIDYKAEDFAQALKEACPKGIDVYFEN 226 (340)
T ss_pred CCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc-eeeecCcccHHHHHHHHCCCCeEEEEEc
Confidence 3446799999999999988887777899999999988877543221 1111 12233332 2444444 689999977
Q ss_pred ChhHHHHHHHh--CCCCEEEEecccccccCC
Q 028418 171 SEGFISNAGSL--KGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a~g~ll~AA~~--aGVkriV~vSS~~Vyg~~ 199 (209)
.-|.+++|+.. +---||+.+..++-|..+
T Consensus 227 VGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 227 VGGEVLDAVLPLLNLFARIPVCGAISQYNAP 257 (340)
T ss_pred CCchHHHHHHHhhccccceeeeeehhhcCCC
Confidence 55556666532 344688988888888776
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.015 Score=55.33 Aligned_cols=65 Identities=17% Similarity=0.058 Sum_probs=50.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++|+|+|. |.||+.++..|...|.+|.+..+++.++......+++++ .+.++++++|.||.+
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~--------~l~eal~~aDVVI~a 274 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVM--------TMEEAAELGDIFVTA 274 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEec--------CHHHHHhCCCEEEEC
Confidence 46789999996 999999999999999999999998876543322233322 246778899999987
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.083 Score=41.40 Aligned_cols=96 Identities=14% Similarity=0.144 Sum_probs=64.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchh-------------------------hhcCCc--eEEEEcc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM-------------------------ESFGTY--VESMAGD 150 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~-------------------------~~~~~~--vevv~GD 150 (209)
..+|+|.|+ |.+|+.+++.|...|. ++..++.+.-... ....+. ++.+.-+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 457888885 6699999999999998 5776664321100 001123 4556666
Q ss_pred CCCHHHHHHhhcCCcEEEEcC--h---hHHHHHHHhCCCCEEEEeccccccc
Q 028418 151 ASNKKFLKTALRGVRSIICPS--E---GFISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 151 l~D~~sL~~AL~GvDaVIh~a--~---g~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+ +.+.+.+.++++|.||++. . -.+.+.|++.++ .+|+.+..+.+|
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~-p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGI-PFIDAGVNGFYG 130 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred c-ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence 6 5567788889999999882 1 126778899987 588777666555
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.02 Score=49.59 Aligned_cols=94 Identities=13% Similarity=0.061 Sum_probs=58.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhh-cCCcEEEEcCh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE 172 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL-~GvDaVIh~a~ 172 (209)
.+..+|||+||+|-+|..+++.+...|.+|.++++++++.......+++.+ .|..++ +.+.+.. .|+|.||.+..
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g 220 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVG 220 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence 346799999999999999999999999999999988766543222223222 133322 2233222 47899998732
Q ss_pred hH----HHHHHHhCCCCEEEEeccc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS~ 193 (209)
+. .++..+.. .+||.++..
T Consensus 221 ~~~~~~~~~~l~~~--G~iv~~g~~ 243 (329)
T cd08294 221 GEFSSTVLSHMNDF--GRVAVCGSI 243 (329)
T ss_pred HHHHHHHHHhhccC--CEEEEEcch
Confidence 22 23333222 467776543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.021 Score=51.21 Aligned_cols=71 Identities=14% Similarity=0.078 Sum_probs=47.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCC--ceEEEEc-----cCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESMAG-----DASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~--~vevv~G-----Dl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| .|.+|..++..|..+||+|++..|++++....... +.....+ .+.-.+++.++++.+|.||.+
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 46899996 59999999999999999999999987654322110 0000001 011122455678899999987
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.019 Score=47.99 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=46.0
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.....++|||.|+...+|..+++.|.++|.+|.+..|+. +.+.+.++.+|.||.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEc
Confidence 356788999999977889999999999999988888752 3466788888998887
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.0074 Score=44.12 Aligned_cols=63 Identities=14% Similarity=0.164 Sum_probs=45.9
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCC---CcEEEE-EeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKR---TRIKAL-VKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G---~~VraL-vR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|.|. |+|.+|+.+++.|++.| ++|... .|++++..+... .++.+... +..++++.+|.||.+
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~advvila 68 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQEADVVILA 68 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHHHTSEEEE-
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC------ChHHhhccCCEEEEE
Confidence 56777 89999999999999999 999955 899887654321 11333321 246778899999988
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.0072 Score=47.23 Aligned_cols=81 Identities=15% Similarity=0.166 Sum_probs=49.3
Q ss_pred CeEEEEcCC---CHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---h
Q 028418 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S---E 172 (209)
Q Consensus 100 ~~ILVTGAT---GfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a---~ 172 (209)
++|+|.||+ +..|..+++.|+++|++|..+. +... ...+ ... . .++.+.-..+|.++.+ . .
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vn--p~~~-~i~G--~~~-y------~sl~e~p~~iDlavv~~~~~~~ 68 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVN--PKGG-EILG--IKC-Y------PSLAEIPEPIDLAVVCVPPDKV 68 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEES--TTCS-EETT--EE--B------SSGGGCSST-SEEEE-S-HHHH
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEEC--CCce-EECc--EEe-e------ccccCCCCCCCEEEEEcCHHHH
Confidence 479999998 7799999999999999998883 3321 1111 111 1 1233323678888876 2 2
Q ss_pred hHHHHHHHhCCCCEEEEecc
Q 028418 173 GFISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g~ll~AA~~aGVkriV~vSS 192 (209)
..+++.|.+.|++.+++.++
T Consensus 69 ~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 69 PEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp HHHHHHHHHHT-SEEEE-TT
T ss_pred HHHHHHHHHcCCCEEEEEcc
Confidence 23788888889999999987
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.012 Score=51.70 Aligned_cols=63 Identities=13% Similarity=0.036 Sum_probs=46.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|+.+++.|.+.|++|.+..|++++.......++.+ .+++.++++.+|.||.+
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~-------~~~~~e~~~~~d~vi~~ 65 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAET-------ASTAKAVAEQCDVIITM 65 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEe
Confidence 5799998 699999999999999999999999887654332222221 12345667889998877
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.025 Score=48.16 Aligned_cols=69 Identities=7% Similarity=0.130 Sum_probs=50.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+..+++|||.|| |.+|.+.++.|++.|++|+++.++..+. ..... ..+.+..-++. ...+.++|.||.+
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~-----~~~l~~adlViaa 77 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFE-----PSDIVDAFLVIAA 77 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCC-----hhhcCCceEEEEc
Confidence 456789999998 9999999999999999999998765432 22222 23566554443 2347889999987
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.014 Score=50.36 Aligned_cols=63 Identities=11% Similarity=0.034 Sum_probs=45.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC----cEEEE-EeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT----RIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~----~VraL-vR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.+.| .|.+|+.+++.|+++|+ +|.+. .|++++.......++.+. . +..++++.+|.||.+
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~----~---~~~e~~~~aDvVil~ 68 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTA----A---SNTEVVKSSDVIILA 68 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEe----C---ChHHHHhcCCEEEEE
Confidence 5788997 99999999999999998 88888 777766543322234331 1 234567788999877
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.043 Score=51.46 Aligned_cols=88 Identities=17% Similarity=0.074 Sum_probs=53.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHH-HCCCc---EEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-hh
Q 028418 100 DAVLVTDGDSDIGQMVILSLI-VKRTR---IKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll-~~G~~---VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~g 173 (209)
++|.|.||||.+|+.+++.|. ++.++ ++++.-..+.- ...+. +.+...-++.+. +.+.++|.||.++ ..
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~-~~~~~v~~~~~~----~~~~~vDivffa~g~~ 75 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFDI----DALKALDIIITCQGGD 75 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCC-CCcceEEcCccc----ccccCCCEEEEcCCHH
Confidence 368999999999999999998 66665 44444221111 11121 122233344332 3568999999983 22
Q ss_pred ---HHHHHHHhCCCC-EEEEecc
Q 028418 174 ---FISNAGSLKGVQ-HVILLSQ 192 (209)
Q Consensus 174 ---~ll~AA~~aGVk-riV~vSS 192 (209)
.+...+.++|.. .+|=.||
T Consensus 76 ~s~~~~p~~~~aG~~~~VIDnSS 98 (366)
T TIGR01745 76 YTNEIYPKLRESGWQGYWIDAAS 98 (366)
T ss_pred HHHHHHHHHHhCCCCeEEEECCh
Confidence 267778888975 4444444
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.085 Score=48.71 Aligned_cols=96 Identities=13% Similarity=0.136 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCC-------------------cchh------hhcCCce--EEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAM------ESFGTYV--ESMA 148 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~-------------------~~a~------~~~~~~v--evv~ 148 (209)
....+|+|.|+ |.+|+.++..|...|. +++.++++. .++. ....+.+ +.+.
T Consensus 133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 44668999976 7799999999999997 677777761 2221 1112334 3444
Q ss_pred ccCCCHHHHHHhhcCCcEEEEcCh-----hHHHHHHHhCCCCEEEEeccccc
Q 028418 149 GDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 149 GDl~D~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~aGVkriV~vSS~~V 195 (209)
..++ .+.+.+.++++|.||.+.+ -.+-++|++.++. +|+.+..+.
T Consensus 212 ~~~~-~~~~~~~~~~~D~Vv~~~d~~~~r~~ln~~~~~~~ip-~i~~~~~g~ 261 (376)
T PRK08762 212 ERVT-SDNVEALLQDVDVVVDGADNFPTRYLLNDACVKLGKP-LVYGAVFRF 261 (376)
T ss_pred ccCC-hHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEeccC
Confidence 4443 4567778899999998832 1266778888865 677665443
|
|
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.052 Score=49.10 Aligned_cols=85 Identities=12% Similarity=0.096 Sum_probs=57.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEc-Chh-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP-SEG- 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~-a~g- 173 (209)
..+|+|-|-||++|+.+.+.|+..|.++++-+ +|.+ ....++ +.. -.++.++-+. +|.++.+ ...
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V-~p~~~~~~v~G--~~~-------y~sv~dlp~~~~~Dlavi~vpa~~ 75 (286)
T TIGR01019 6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVGGV-TPGKGGTTVLG--LPV-------FDSVKEAVEETGANASVIFVPAPF 75 (286)
T ss_pred CCcEEEecCCcHHHHHHHHHHHhCCCCEEEEE-CCCCCcceecC--eec-------cCCHHHHhhccCCCEEEEecCHHH
Confidence 45899999999999999999999999977766 4442 122222 111 1234444443 7888776 222
Q ss_pred --HHHHHHHhCCCCEEEEeccc
Q 028418 174 --FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS~ 193 (209)
..++.|.+.||+.+|.+|+.
T Consensus 76 v~~~l~e~~~~Gvk~avIis~G 97 (286)
T TIGR01019 76 AADAIFEAIDAGIELIVCITEG 97 (286)
T ss_pred HHHHHHHHHHCCCCEEEEECCC
Confidence 25666778999999888875
|
ATP citrate lyases appear to form an outgroup. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.11 Score=43.93 Aligned_cols=101 Identities=10% Similarity=0.114 Sum_probs=67.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcc---------------------h------hhhcCCc--eE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN---------------------A------MESFGTY--VE 145 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~---------------------a------~~~~~~~--ve 145 (209)
...+.+|+|.|+.| +|+.+++.|...|.. ++.++.+.-. + .....+. ++
T Consensus 16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~ 94 (198)
T cd01485 16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS 94 (198)
T ss_pred HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence 44567999999998 999999999999965 6666643210 0 0111233 34
Q ss_pred EEEccCCC-HHHHHHhhcCCcEEEEcC--hh---HHHHHHHhCCCCEEEEecccccccC
Q 028418 146 SMAGDASN-KKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 146 vv~GDl~D-~~sL~~AL~GvDaVIh~a--~g---~ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+..++.+ .+...+.+..+|.||.+. .. .+-+.|++.++ .+|+.++.+.+|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~ 152 (198)
T cd01485 95 IVEEDSLSNDSNIEEYLQKFTLVIATEENYERTAKVNDVCRKHHI-PFISCATYGLIGY 152 (198)
T ss_pred EEecccccchhhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEeecCEEE
Confidence 45555542 445567788999999882 11 26678899997 4777777766653
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.031 Score=52.19 Aligned_cols=90 Identities=12% Similarity=0.085 Sum_probs=54.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCc---chhhhcCCceE-E--EEccCCCHHHHHHhhcCCcEEEEc-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR---NAMESFGTYVE-S--MAGDASNKKFLKTALRGVRSIICP- 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~---~a~~~~~~~ve-v--v~GDl~D~~sL~~AL~GvDaVIh~- 170 (209)
+.+|.|.||+|++|..|++.|..+ ..++...+.+.. +.....+ +.. . ......|++.+ ..++||+||.+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p-~l~g~~~l~~~~~~~~~~--~~~~~DvvFlal 78 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHP-NLRGLVDLPFQTIDPEKI--ELDECDVVFLAL 78 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCc-ccccccccccccCChhhh--hcccCCEEEEec
Confidence 678999999999999999988765 356555553221 1112221 111 1 22223344443 56789999988
Q ss_pred ChhH---HHHHHHhCCCCEEEEecc
Q 028418 171 SEGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 171 a~g~---ll~AA~~aGVkriV~vSS 192 (209)
..|. ++....+.|++ ||=+|.
T Consensus 79 Phg~s~~~v~~l~~~g~~-VIDLSa 102 (349)
T COG0002 79 PHGVSAELVPELLEAGCK-VIDLSA 102 (349)
T ss_pred CchhHHHHHHHHHhCCCe-EEECCc
Confidence 3443 55555666766 777775
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.027 Score=51.57 Aligned_cols=71 Identities=6% Similarity=-0.077 Sum_probs=48.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-----------CCce--EEEEccCCCHHHHHHhhcCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----------GTYV--ESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-----------~~~v--evv~GDl~D~~sL~~AL~GvD 165 (209)
-++|.|.|+ |-+|+.++..++..|++|++.+++++...... ..+. ......+.-..++.+++++||
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 468999986 99999999999999999999999876432110 0000 001111222235778999999
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.||-+
T Consensus 86 lViEa 90 (321)
T PRK07066 86 FIQES 90 (321)
T ss_pred EEEEC
Confidence 99987
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.0093 Score=52.45 Aligned_cols=62 Identities=10% Similarity=-0.016 Sum_probs=46.0
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|.|.| .|.+|+.+++.|++.|++|.+..|++++.......+.. ...+..++++.+|.||.+
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivi~~ 62 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAV-------TAETARQVTEQADVIFTM 62 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCc-------ccCCHHHHHhcCCEEEEe
Confidence 377886 69999999999999999999999998766543322221 122456778889998877
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.033 Score=51.92 Aligned_cols=94 Identities=10% Similarity=0.139 Sum_probs=66.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhcCCcEEEEc----C-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICP----S- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~GvDaVIh~----a- 171 (209)
|.+.+.|+|+.| +|..-|+...+-|++|.++.++.++.++.+ .-+.|++..-..|++.+.++..-.|.++|+ +
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~ 259 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAE 259 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccc
Confidence 677999999999 999888888899999999999874443332 245777766666999888887755555554 1
Q ss_pred --hhHHHHHHHhCCCCEEEEecccc
Q 028418 172 --EGFISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 --~g~ll~AA~~aGVkriV~vSS~~ 194 (209)
...++..++..| ++|+++-..
T Consensus 260 ~~~~~~~~~lk~~G--t~V~vg~p~ 282 (360)
T KOG0023|consen 260 HALEPLLGLLKVNG--TLVLVGLPE 282 (360)
T ss_pred cchHHHHHHhhcCC--EEEEEeCcC
Confidence 122455555444 677776554
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.011 Score=51.94 Aligned_cols=63 Identities=10% Similarity=0.094 Sum_probs=45.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|..++..|..+|++|.+..|+++........++ ... ..+ .++++++|.||.+
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~---~~~----~~~~~~aDlVila 64 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEA---STD----LSLLKDCDLVILA 64 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccc---cCC----HhHhcCCCEEEEc
Confidence 4789998 7999999999999999999999998765543322211 110 111 2357889999887
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.028 Score=42.62 Aligned_cols=84 Identities=11% Similarity=0.213 Sum_probs=56.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-h--
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E-- 172 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~-- 172 (209)
+..+++|||.|+ |.+|.+=++.|++.|.+|+++....+..+ ..+++..-++ .+.+++++.||.+. .
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~~----~~i~~~~~~~------~~~l~~~~lV~~at~d~~ 72 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFSE----GLIQLIRREF------EEDLDGADLVFAATDDPE 72 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHHH----TSCEEEESS-------GGGCTTESEEEE-SS-HH
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhhh----hHHHHHhhhH------HHHHhhheEEEecCCCHH
Confidence 345779999998 99999999999999999999987651111 3456655554 34489999999773 1
Q ss_pred --hHHHHHHHhCCCCEEEEecc
Q 028418 173 --GFISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 --g~ll~AA~~aGVkriV~vSS 192 (209)
..+.+.|++.++ +|.++.
T Consensus 73 ~n~~i~~~a~~~~i--~vn~~D 92 (103)
T PF13241_consen 73 LNEAIYADARARGI--LVNVVD 92 (103)
T ss_dssp HHHHHHHHHHHTTS--EEEETT
T ss_pred HHHHHHHHHhhCCE--EEEECC
Confidence 126677777664 555544
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.023 Score=50.60 Aligned_cols=66 Identities=9% Similarity=-0.020 Sum_probs=45.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|+.+++.|+++|++|.+..|++++.......++.+ ..+++.+.+.+.++|.||.+
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~~~~e~~~~~~~~dvvi~~ 66 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATG----ADSLEELVAKLPAPRVVWLM 66 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCee----cCCHHHHHhhcCCCCEEEEE
Confidence 3688886 899999999999999999999999887654432223322 23444444444456776655
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.0088 Score=54.54 Aligned_cols=72 Identities=19% Similarity=0.214 Sum_probs=55.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCc-----EEEEEeCCcchhhh------cC----CceEEEEccCCCHHHHHHhhc-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTR-----IKALVKDKRNAMES------FG----TYVESMAGDASNKKFLKTALR- 162 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~-----VraLvR~~~~a~~~------~~----~~vevv~GDl~D~~sL~~AL~- 162 (209)
++.+||||++..+|-.|+.+|++...+ +.+..|+-++++.. +. ..++++..|+++..++.+|-+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 567999999999999999999986543 44455888776521 22 347899999999999988864
Q ss_pred ------CCcEEEEc
Q 028418 163 ------GVRSIICP 170 (209)
Q Consensus 163 ------GvDaVIh~ 170 (209)
-.|.|+..
T Consensus 83 i~~rf~~ld~iylN 96 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLN 96 (341)
T ss_pred HHHHhhhccEEEEc
Confidence 45778765
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.034 Score=56.19 Aligned_cols=95 Identities=15% Similarity=0.248 Sum_probs=66.4
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcc------------------hh------hhcCCc--eE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN------------------AM------ESFGTY--VE 145 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~------------------a~------~~~~~~--ve 145 (209)
.+...+.+|+|.|+ | +|++++..|...|. +++.++.|.-. +. ....++ |+
T Consensus 102 Q~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~ 179 (722)
T PRK07877 102 QERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE 179 (722)
T ss_pred HHHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence 34556779999999 8 99999999999995 77777643311 00 011233 55
Q ss_pred EEEccCCCHHHHHHhhcCCcEEEEcChh-----HHHHHHHhCCCCEEEEecc
Q 028418 146 SMAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 146 vv~GDl~D~~sL~~AL~GvDaVIh~a~g-----~ll~AA~~aGVkriV~vSS 192 (209)
.+...++ ++.+.+.+.++|.||.+.+. .+-++|.+.++. +|+-++
T Consensus 180 ~~~~~i~-~~n~~~~l~~~DlVvD~~D~~~~R~~ln~~a~~~~iP-~i~~~~ 229 (722)
T PRK07877 180 VFTDGLT-EDNVDAFLDGLDVVVEECDSLDVKVLLREAARARRIP-VLMATS 229 (722)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcC
Confidence 5666665 77899999999999988322 266788999876 666554
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.031 Score=51.93 Aligned_cols=92 Identities=14% Similarity=0.252 Sum_probs=52.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCc---EEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcChh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~---VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a~g 173 (209)
+.+|.|.||||.+|+.+++.|-++... +.++....+.-.. .|......+.-++.|.. .++++|.||.++.+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~v~~~~~~~~----~~~~~Divf~~ag~ 76 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIGVPEDAADEF----VFSDVDIVFFAAGG 76 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccccCcccccccc----ccccCCEEEEeCch
Confidence 468999999999999999988887644 3344422221111 11111111222223322 34499999988422
Q ss_pred ----HHHHHHHhCCCCEEEEeccccccc
Q 028418 174 ----FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 174 ----~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.+...+.++| .+-++..++++
T Consensus 77 ~~s~~~~p~~~~~G---~~VIdnsSa~R 101 (334)
T COG0136 77 SVSKEVEPKAAEAG---CVVIDNSSAFR 101 (334)
T ss_pred HHHHHHHHHHHHcC---CEEEeCCcccc
Confidence 2666777888 44455555544
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.051 Score=49.33 Aligned_cols=66 Identities=12% Similarity=0.241 Sum_probs=47.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh----hh-----cCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ES-----FGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~----~~-----~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
...++|.|+|| |.||+.++..|..++. +++.++++.+.+. .+ +...+.+..+ + .++++++|
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~----~~~~~~ad 75 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D----YSDCKDAD 75 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C----HHHhCCCC
Confidence 44569999998 9999999999999887 7999988776542 11 1122333322 2 35699999
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.||.+
T Consensus 76 ivIit 80 (315)
T PRK00066 76 LVVIT 80 (315)
T ss_pred EEEEe
Confidence 99987
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.058 Score=46.16 Aligned_cols=83 Identities=16% Similarity=0.182 Sum_probs=60.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-hh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Ch
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ES-FGTYVESMAGDASNKKFLKTALRGVRSIICP-SE 172 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (209)
+...++|||.| .|.+|..-++.|++.|.+|+++..+..+.. .+ ...+++++.+++... -+++++.||.+ ..
T Consensus 6 ~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~-----dl~~~~lVi~at~d 79 (205)
T TIGR01470 6 NLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDAD-----ILEGAFLVIAATDD 79 (205)
T ss_pred EcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHH-----HhCCcEEEEECCCC
Confidence 45567999998 488999999999999999999986654322 11 123689999998743 36899999887 22
Q ss_pred h----HHHHHHHhCCC
Q 028418 173 G----FISNAGSLKGV 184 (209)
Q Consensus 173 g----~ll~AA~~aGV 184 (209)
. .+...|++.|+
T Consensus 80 ~~ln~~i~~~a~~~~i 95 (205)
T TIGR01470 80 EELNRRVAHAARARGV 95 (205)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 1 26667776654
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.04 Score=50.42 Aligned_cols=38 Identities=11% Similarity=-0.007 Sum_probs=34.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
.+++|||||+...+|.++++.|.++|++|.++..++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 46899999999999999999999999999999877643
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.013 Score=52.19 Aligned_cols=39 Identities=13% Similarity=0.038 Sum_probs=34.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
+..+|.|.|+ |.+|+.++..|+..|++|++..++++...
T Consensus 4 ~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~ 42 (286)
T PRK07819 4 AIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELAT 42 (286)
T ss_pred CccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 3458999987 99999999999999999999999987643
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.025 Score=50.42 Aligned_cols=51 Identities=10% Similarity=0.126 Sum_probs=40.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| +|.+|+.++..|..+||+|++..|++. .++.++++++|.||.+
T Consensus 4 ~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~--------------------~~~~~~~~~advvi~~ 54 (308)
T PRK14619 4 PKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG--------------------LSLAAVLADADVIVSA 54 (308)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC--------------------CCHHHHHhcCCEEEEE
Confidence 46899995 699999999999999999999998753 1244556677777765
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.09 Score=46.22 Aligned_cols=92 Identities=13% Similarity=0.096 Sum_probs=58.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhhcCCceEEEEccCCC--HHHHHHhhc--CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALR--GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~~~~~vevv~GDl~D--~~sL~~AL~--GvDaVIh~a 171 (209)
.+.++|||+|+ |.+|..+++.+...|.+ |.++.+++++.......+++.+ .|..+ .+.+.+... ++|.||.+.
T Consensus 162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~~~~~~~~d~vid~~ 239 (339)
T cd08239 162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFV-INSGQDDVQEIRELTSGAGADVAIECS 239 (339)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE-EcCCcchHHHHHHHhCCCCCCEEEECC
Confidence 45789999986 99999999999899999 9988887765432211123222 12222 445555554 699999872
Q ss_pred --hhH---HHHHHHhCCCCEEEEecc
Q 028418 172 --EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 --~g~---ll~AA~~aGVkriV~vSS 192 (209)
... .++..+..| ++|.++.
T Consensus 240 g~~~~~~~~~~~l~~~G--~~v~~g~ 263 (339)
T cd08239 240 GNTAARRLALEAVRPWG--RLVLVGE 263 (339)
T ss_pred CCHHHHHHHHHHhhcCC--EEEEEcC
Confidence 211 344444444 7777664
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.031 Score=47.21 Aligned_cols=92 Identities=15% Similarity=0.115 Sum_probs=57.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~a~ 172 (209)
+.++|||+||+|.+|..+++.+...|.+|.++++++++.......++..+ .|..+++ .+.+.. +++|.|+.+..
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 222 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAV-FNYRAEDLADRILAATAGQGVDVIIEVLA 222 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHHcCCCceEEEEECCc
Confidence 46799999999999999999999999999999987765432211122211 2333333 333333 37899998732
Q ss_pred hH----HHHHHHhCCCCEEEEecc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS 192 (209)
+. .++... .-.++|.+++
T Consensus 223 ~~~~~~~~~~l~--~~g~~v~~~~ 244 (325)
T cd08253 223 NVNLAKDLDVLA--PGGRIVVYGS 244 (325)
T ss_pred hHHHHHHHHhhC--CCCEEEEEee
Confidence 22 122222 2256777765
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.12 Score=40.64 Aligned_cols=91 Identities=21% Similarity=0.191 Sum_probs=59.3
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc-------------------chh------hhcCCce--EEEEccCC
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAM------ESFGTYV--ESMAGDAS 152 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~-------------------~a~------~~~~~~v--evv~GDl~ 152 (209)
+|+|.|+ |.+|+.+++.|...|. ++..++.+.- ++. ....+.+ +.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899997 8999999999999998 5777764420 000 0112333 44555554
Q ss_pred CHHHHHHhhcCCcEEEEcC-----hhHHHHHHHhCCCCEEEEecccc
Q 028418 153 NKKFLKTALRGVRSIICPS-----EGFISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 153 D~~sL~~AL~GvDaVIh~a-----~g~ll~AA~~aGVkriV~vSS~~ 194 (209)
+. ...+.+.+.|.||.+. .-.+.++|++.++. +|...+.+
T Consensus 80 ~~-~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~-~i~~~~~g 124 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIP-VIDAGGLG 124 (143)
T ss_pred hh-hHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcCCC
Confidence 43 3467789999999882 12277889998855 55555544
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.043 Score=50.75 Aligned_cols=84 Identities=8% Similarity=0.061 Sum_probs=52.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEE---EEE---eCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcCh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIK---ALV---KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~Vr---aLv---R~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a~ 172 (209)
..+|.| ||||-+|+.+++.|-+++++|. .+. |+..+.. .|. +-++..-++++. .++++|.+|. +.
T Consensus 3 ~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i-~f~-g~~~~V~~l~~~-----~f~~vDia~f-ag 73 (322)
T PRK06901 3 TLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGI-RFN-NKAVEQIAPEEV-----EWADFNYVFF-AG 73 (322)
T ss_pred cceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEE-EEC-CEEEEEEECCcc-----CcccCCEEEE-cC
Confidence 457999 9999999999999999998765 333 3333221 222 224444444432 4689999988 43
Q ss_pred hH----HHHHHHhCCCCEEEEecc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS 192 (209)
+. +...+.++|.. +|=.||
T Consensus 74 ~~~s~~~ap~a~~aG~~-VIDnSs 96 (322)
T PRK06901 74 KMAQAEHLAQAAEAGCI-VIDLYG 96 (322)
T ss_pred HHHHHHHHHHHHHCCCE-EEECCh
Confidence 22 55566777743 443444
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.086 Score=47.20 Aligned_cols=93 Identities=17% Similarity=0.125 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhhc--CCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL~--GvDaVIh~ 170 (209)
.+.++|||+|+ |-+|..+++.+...|.+ |.++.+++++.......+++.+ .|..++ +.+.++.. |+|.||-+
T Consensus 175 ~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~-i~~~~~~~~~~i~~~~~~~g~d~vid~ 252 (358)
T TIGR03451 175 KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHT-VNSSGTDPVEAIRALTGGFGADVVIDA 252 (358)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE-EcCCCcCHHHHHHHHhCCCCCCEEEEC
Confidence 45779999985 99999999988899986 8888887765432211223221 133332 33444443 68999987
Q ss_pred C--hhH---HHHHHHhCCCCEEEEeccc
Q 028418 171 S--EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 171 a--~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
. ..+ .+++++.. .++|.+...
T Consensus 253 ~g~~~~~~~~~~~~~~~--G~iv~~G~~ 278 (358)
T TIGR03451 253 VGRPETYKQAFYARDLA--GTVVLVGVP 278 (358)
T ss_pred CCCHHHHHHHHHHhccC--CEEEEECCC
Confidence 2 222 23333333 578877653
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.029 Score=46.32 Aligned_cols=95 Identities=11% Similarity=0.054 Sum_probs=58.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh----hcCCcEEEEcCh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICPSE 172 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A----L~GvDaVIh~a~ 172 (209)
.+..+|||+|+++ +|+.+++.+...|.+|.++++++++.......+... ..|..+.+..... -.++|.||.+..
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 210 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADH-VIDYKEEDLEEELRLTGGGGADVVIDAVG 210 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCce-eccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence 4567999999999 999999999999999999998775543221111211 1233333332221 257899998732
Q ss_pred h-H----HHHHHHhCCCCEEEEeccccc
Q 028418 173 G-F----ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 173 g-~----ll~AA~~aGVkriV~vSS~~V 195 (209)
+ . .++..+.. .++|.++....
T Consensus 211 ~~~~~~~~~~~l~~~--G~~v~~~~~~~ 236 (271)
T cd05188 211 GPETLAQALRLLRPG--GRIVVVGGTSG 236 (271)
T ss_pred CHHHHHHHHHhcccC--CEEEEEccCCC
Confidence 2 2 33333333 46887776543
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.02 Score=50.97 Aligned_cols=63 Identities=10% Similarity=0.066 Sum_probs=46.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|..+++.|+++|++|.+..|++++.......++. ...+..++++++|.||.+
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~-------~~~s~~~~~~~aDvVi~~ 64 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGAT-------PAASPAQAAAGAEFVITM 64 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCc-------ccCCHHHHHhcCCEEEEe
Confidence 4788885 89999999999999999999999998776543222221 122345677888888876
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.026 Score=46.64 Aligned_cols=66 Identities=17% Similarity=0.028 Sum_probs=47.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++|.|.| .|.||+.|++.|..-|.+|.+..|............++ ..+++++++.+|.|+.+
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~--------~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE--------YVSLDELLAQADIVSLH 98 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE--------ESSHHHHHHH-SEEEE-
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce--------eeehhhhcchhhhhhhh
Confidence 45678999997 59999999999999999999999988764311111122 23577889999998865
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.14 Score=44.28 Aligned_cols=91 Identities=13% Similarity=0.101 Sum_probs=57.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHH---HHHHhh-cCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKK---FLKTAL-RGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~---sL~~AL-~GvDaVIh~ 170 (209)
+..+|||+|++|.+|..+++.+...|.+|.++++++++.... ++. .+++. ..+.+ .+.+.. .++|.+|.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~-~~~~~--~~~~~~~~~v~~~~~~~~d~vi~~ 221 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF-DAAIN--YKTPDLAEALKEAAPDGIDVYFDN 221 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC-ceEEe--cCChhHHHHHHHhccCCceEEEEc
Confidence 457999999999999999999999999999999877654322 221 12222 22322 222222 478999987
Q ss_pred ChhH----HHHHHHhCCCCEEEEeccc
Q 028418 171 SEGF----ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 171 a~g~----ll~AA~~aGVkriV~vSS~ 193 (209)
..+. .++.++.. .++|.++..
T Consensus 222 ~g~~~~~~~~~~l~~~--G~~v~~g~~ 246 (329)
T cd05288 222 VGGEILDAALTLLNKG--GRIALCGAI 246 (329)
T ss_pred chHHHHHHHHHhcCCC--ceEEEEeec
Confidence 3222 23333333 467777654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.11 Score=47.11 Aligned_cols=95 Identities=12% Similarity=0.073 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCH-----HHHHHhhc-CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK-----KFLKTALR-GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~-----~sL~~AL~-GvDaVIh 169 (209)
.+.++|||.|+ |-||...++.+...|. +|.++++++++......-+++.+. |..++ +.+.+... ++|.||-
T Consensus 197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i-~~~~~~~~~~~~v~~~~~~g~dvvid 274 (381)
T PLN02740 197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFI-NPKDSDKPVHERIREMTGGGVDYSFE 274 (381)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEE-ecccccchHHHHHHHHhCCCCCEEEE
Confidence 34679999996 9999999998889998 599998887665432222232221 33321 23444333 6999998
Q ss_pred c-C-hhHHHHHHH--hCCCCEEEEeccc
Q 028418 170 P-S-EGFISNAGS--LKGVQHVILLSQR 193 (209)
Q Consensus 170 ~-a-~g~ll~AA~--~aGVkriV~vSS~ 193 (209)
+ . ..++-++.. ..|-.++|.++..
T Consensus 275 ~~G~~~~~~~a~~~~~~g~G~~v~~G~~ 302 (381)
T PLN02740 275 CAGNVEVLREAFLSTHDGWGLTVLLGIH 302 (381)
T ss_pred CCCChHHHHHHHHhhhcCCCEEEEEccC
Confidence 7 2 223322222 2233567777653
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.022 Score=51.96 Aligned_cols=69 Identities=20% Similarity=0.179 Sum_probs=45.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh--hhcC--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~--~~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|+||||+||++++..|..++ .+++.++.+..... .+.. ....+... ...+.+.++++++|.||.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~--~~~~~~y~~~~daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGY--LGPEELKKALKGADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEe--cCCCchHHhcCCCCEEEEe
Confidence 589999999999999999998888 47888877621111 1111 11122211 0112356889999999988
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.076 Score=46.17 Aligned_cols=92 Identities=11% Similarity=0.086 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF- 174 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~- 174 (209)
.+..+|||+|+ |.+|+.+++.+...|++|.+++++.++.......+++.+..+ .+.......-.++|.||.+ ..+.
T Consensus 161 ~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~d~vi~~~~~~~~ 238 (330)
T cd08245 161 RPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDS-GAELDEQAAAGGADVILVTVVSGAA 238 (330)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEecc-CCcchHHhccCCCCEEEECCCcHHH
Confidence 34678999976 559999999999999999999988765432211122222211 2222222223579999987 3222
Q ss_pred ---HHHHHHhCCCCEEEEecc
Q 028418 175 ---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS 192 (209)
.++..+..| ++|.++.
T Consensus 239 ~~~~~~~l~~~G--~~i~~~~ 257 (330)
T cd08245 239 AEAALGGLRRGG--RIVLVGL 257 (330)
T ss_pred HHHHHHhcccCC--EEEEECC
Confidence 333333334 7777653
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.16 Score=42.26 Aligned_cols=91 Identities=10% Similarity=0.114 Sum_probs=58.9
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCC---c---------------chh------hhcCCc--eEEEEccCCC
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---R---------------NAM------ESFGTY--VESMAGDASN 153 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~---~---------------~a~------~~~~~~--vevv~GDl~D 153 (209)
+|+|.|+ |-+|+.++..|...|.. ++.++.+. + ++. ....+. ++.+...++.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 5899996 88999999999999985 88887654 1 110 111233 3445555543
Q ss_pred HHHHHHhhcCCcEEEEcCh-----hHHHHHHHhC-CCCEEEEecccc
Q 028418 154 KKFLKTALRGVRSIICPSE-----GFISNAGSLK-GVQHVILLSQRQ 194 (209)
Q Consensus 154 ~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~a-GVkriV~vSS~~ 194 (209)
+.+.+.++++|.||.+.+ -.+.+.+.+. ++. +|+.+..+
T Consensus 80 -~~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip-~i~~~~~~ 124 (174)
T cd01487 80 -NNLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKP-VVCASGMA 124 (174)
T ss_pred -hhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCC-EEEEehhh
Confidence 567788999999998821 1256666665 644 55554333
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.13 Score=43.89 Aligned_cols=102 Identities=12% Similarity=0.130 Sum_probs=65.8
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeC---Ccchhh---------------------hcCCc--eEEE
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAME---------------------SFGTY--VESM 147 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~---~~~a~~---------------------~~~~~--vevv 147 (209)
+.....+|+|.|+ |.+|+.++..|...|+ +++..+++ .+.... ...+. ++.+
T Consensus 17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~ 95 (200)
T TIGR02354 17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAY 95 (200)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEe
Confidence 4556779999998 6699999999999998 58888876 221110 11122 4455
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh--h---HHHHHH-HhCCCCEEEEecccccccC
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE--G---FISNAG-SLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~--g---~ll~AA-~~aGVkriV~vSS~~Vyg~ 198 (209)
..+++ .+.+.+.++++|.||-+.+ . .+.+.+ +..+.+.+++.|...-++.
T Consensus 96 ~~~i~-~~~~~~~~~~~DlVi~a~Dn~~~k~~l~~~~~~~~~~~~ii~~~g~~g~~~ 151 (200)
T TIGR02354 96 DEKIT-EENIDKFFKDADIVCEAFDNAEAKAMLVNAVLEKYKDKYLIAASGLAGYDD 151 (200)
T ss_pred eeeCC-HhHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHcCCCcEEEEeccccCCC
Confidence 55554 5678888999999998721 1 245554 4455566666544444443
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.07 Score=47.26 Aligned_cols=71 Identities=11% Similarity=0.083 Sum_probs=47.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-------CC----ceE-EEEccCCCHHHHHHhhcCCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GT----YVE-SMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-------~~----~ve-vv~GDl~D~~sL~~AL~GvDa 166 (209)
.++|.|.|+ |.+|..++..|+..|++|++..++++...... +. ... ...+.+.-..++.++++++|.
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDl 82 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADL 82 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCE
Confidence 468999976 99999999999999999999998876543211 10 000 000001111235677899999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
||.+
T Consensus 83 Vi~a 86 (311)
T PRK06130 83 VIEA 86 (311)
T ss_pred EEEe
Confidence 9987
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.067 Score=49.42 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=51.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh--hhcCCceEEEEccCCCHHHHHHhhc----CCcEEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALR----GVRSIIC 169 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~--~~~~~~vevv~GDl~D~~sL~~AL~----GvDaVIh 169 (209)
..+++.|||.||+|-+|+.+++.+...+..+++.+++.++.+ ..++ ++ ...|+.+++.++...+ ++|.|+.
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lG--Ad-~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLG--AD-EVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcC--Cc-EeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 345678999999999999999988888944444445554432 2333 22 3457888777776666 7999999
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 232 ~ 232 (347)
T KOG1198|consen 232 C 232 (347)
T ss_pred C
Confidence 8
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.17 Score=43.43 Aligned_cols=101 Identities=8% Similarity=0.138 Sum_probs=65.6
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCC---c---------------chh------hhcCCc--eEEE
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---R---------------NAM------ESFGTY--VESM 147 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~---~---------------~a~------~~~~~~--vevv 147 (209)
+.....+|+|.|+ |-+|+.++..|...|.. ++.++.+. + ++. ....+. ++.+
T Consensus 24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~ 102 (212)
T PRK08644 24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH 102 (212)
T ss_pred HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 3556779999996 78999999999999975 77777652 1 110 011233 4445
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh-----hHHHHHHHhC-CCCEEEEecccccccC
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLK-GVQHVILLSQRQRWHS 198 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~a-GVkriV~vSS~~Vyg~ 198 (209)
...+++ +.+.+.++++|.||.+.+ -.+.+.|.+. ++ .+|+.+..+-++.
T Consensus 103 ~~~i~~-~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~~~~~-p~I~~~~~~~~~~ 157 (212)
T PRK08644 103 NEKIDE-DNIEELFKDCDIVVEAFDNAETKAMLVETVLEHPGK-KLVAASGMAGYGD 157 (212)
T ss_pred eeecCH-HHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhCCC-CEEEeehhhccCC
Confidence 555544 556778899999997721 1266778777 64 4666655444443
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.025 Score=50.16 Aligned_cols=70 Identities=10% Similarity=0.129 Sum_probs=45.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhc----CC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF----GT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~----~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.|| |.+|..++..|...|. +|+.++++++.+.... .. ........+.-...+ ++++++|.||.+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEEC
Confidence 579999999 9999999999988875 8999998776543211 00 000000111111123 468999999987
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.021 Score=55.52 Aligned_cols=70 Identities=13% Similarity=0.180 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcC--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++|+|.|+ |.+|+.+++.|+..|. +|.+..|+++++..... .++.+. +...+.+.+++.++|.||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEEEc
Confidence 44678999999 9999999999999996 69999999877654321 122222 23334567889999999987
|
|
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.079 Score=45.11 Aligned_cols=94 Identities=13% Similarity=0.066 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC-HHHHHHhhcCCcEEEEcChhH-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEGF- 174 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D-~~sL~~AL~GvDaVIh~a~g~- 174 (209)
.+..+|||.||+|.+|..+++.+...|.+|.++++++++.......+++.+..+-.+ ...+.+.=+++|.++.+..+.
T Consensus 141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~ 220 (320)
T cd08243 141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTAT 220 (320)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEecCccHHHHHHHhCCCceEEEECCChHH
Confidence 346799999999999999999999999999999988765433222223333222111 222332224789999873222
Q ss_pred ---HHHHHHhCCCCEEEEecc
Q 028418 175 ---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS 192 (209)
.++..... .++|.++.
T Consensus 221 ~~~~~~~l~~~--g~~v~~g~ 239 (320)
T cd08243 221 LKDSLRHLRPG--GIVCMTGL 239 (320)
T ss_pred HHHHHHHhccC--CEEEEEcc
Confidence 22222222 46776654
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK05678 succinyl-CoA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.11 Score=47.02 Aligned_cols=85 Identities=11% Similarity=0.072 Sum_probs=57.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEc-C-hh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP-S-EG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~-a-~g 173 (209)
+.+|+|-|-||.+|+.+++.|++.|+++...| +|.. ..+.++ + .--.++.++-+. +|.++.+ . ..
T Consensus 8 ~~~~~v~~~~~~~g~~~l~~l~~~g~~~v~pV-np~~~~~~v~G--~-------~~y~sv~dlp~~~~~DlAvi~vp~~~ 77 (291)
T PRK05678 8 DTKVIVQGITGKQGTFHTEQMLAYGTNIVGGV-TPGKGGTTVLG--L-------PVFNTVAEAVEATGANASVIYVPPPF 77 (291)
T ss_pred CCeEEEeCCCchHHHHHHHHHHHCCCCEEEEE-CCCCCCCeEeC--e-------eccCCHHHHhhccCCCEEEEEcCHHH
Confidence 45899999999999999999999998854455 4431 112222 1 112344555554 8988776 2 22
Q ss_pred --HHHHHHHhCCCCEEEEeccc
Q 028418 174 --FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS~ 193 (209)
..++.|.+.||+.+|.+|+.
T Consensus 78 v~~~l~e~~~~gvk~avI~s~G 99 (291)
T PRK05678 78 AADAILEAIDAGIDLIVCITEG 99 (291)
T ss_pred HHHHHHHHHHCCCCEEEEECCC
Confidence 26677788999998888874
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.041 Score=48.92 Aligned_cols=67 Identities=12% Similarity=0.013 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..++|+|.| .|.+|..++..|...|+ +|.+..|+++........++... + .....++++++|.||.+
T Consensus 5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~---~--~~~~~~~~~~aDvViia 73 (307)
T PRK07502 5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDR---V--TTSAAEAVKGADLVILC 73 (307)
T ss_pred CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCce---e--cCCHHHHhcCCCEEEEC
Confidence 346899998 99999999999999985 88888888765433221111100 1 11245677889999987
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.043 Score=50.13 Aligned_cols=64 Identities=13% Similarity=0.033 Sum_probs=44.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCCcc--hh----hhcC------CceEEEEccCCCHHHHHHh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AM----ESFG------TYVESMAGDASNKKFLKTA 160 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~~~--a~----~~~~------~~vevv~GDl~D~~sL~~A 160 (209)
.+|.|+||+|+||+.++..|+.++. +++.++.+... +. .+.. .++++. ....++
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~~ 75 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-------DDPNVA 75 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-------cCcHHH
Confidence 3899999999999999999998875 78888874322 21 1111 122221 122678
Q ss_pred hcCCcEEEEc
Q 028418 161 LRGVRSIICP 170 (209)
Q Consensus 161 L~GvDaVIh~ 170 (209)
++++|.||.+
T Consensus 76 ~~daDivvit 85 (322)
T cd01338 76 FKDADWALLV 85 (322)
T ss_pred hCCCCEEEEe
Confidence 9999999998
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.063 Score=50.56 Aligned_cols=66 Identities=12% Similarity=0.137 Sum_probs=53.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
+++|.|.| .|.+|++++.+...-|++|+++.-++........ -+++..+++|++.+++..+.||+|
T Consensus 1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va--~~~i~~~~dD~~al~ela~~~DVi 66 (375)
T COG0026 1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQVA--DRVIVAAYDDPEALRELAAKCDVI 66 (375)
T ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc--cceeecCCCCHHHHHHHHhhCCEE
Confidence 46888988 5999999999999999999999865543322222 267888999999999999999998
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.082 Score=45.54 Aligned_cols=92 Identities=8% Similarity=0.116 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhhc--CCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL~--GvDaVIh~a~ 172 (209)
+..+|||.||+|.+|..+++.+...|.+|.+++++.++.......+++.+. +..+. ..+.+... |+|.||.+..
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~i~~~~~~~~~d~v~d~~g 217 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVV-STEQPGWQDKVREAAGGAPISVALDSVG 217 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEE-cCCCchHHHHHHHHhCCCCCcEEEECCC
Confidence 567999999999999999999999999999999877654322112232221 22222 33444554 6999998722
Q ss_pred h-H---HHHHHHhCCCCEEEEecc
Q 028418 173 G-F---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g-~---ll~AA~~aGVkriV~vSS 192 (209)
+ . .++..+ .-.+||.++.
T Consensus 218 ~~~~~~~~~~l~--~~g~~v~~g~ 239 (324)
T cd08292 218 GKLAGELLSLLG--EGGTLVSFGS 239 (324)
T ss_pred ChhHHHHHHhhc--CCcEEEEEec
Confidence 2 2 222222 2256777653
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.15 Score=45.95 Aligned_cols=92 Identities=9% Similarity=0.012 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhhc-CCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR-GVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL~-GvDaVIh~a- 171 (209)
+.++|||+|+ |.||...+..+...|. +|.++++++++......-+++.+ .|..+. +.+.+... ++|.||.+.
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~-i~~~~~~~~~~i~~~~~~g~d~vid~~G 268 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATAT-VNAGDPNAVEQVRELTGGGVDYAFEMAG 268 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceE-eCCCchhHHHHHHHHhCCCCCEEEECCC
Confidence 4679999985 9999999988888998 58888887766432211223222 223332 23444433 689999872
Q ss_pred -hhH---HHHHHHhCCCCEEEEeccc
Q 028418 172 -EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 -~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
... .++..+.. .++|.++..
T Consensus 269 ~~~~~~~~~~~l~~~--G~iv~~G~~ 292 (371)
T cd08281 269 SVPALETAYEITRRG--GTTVTAGLP 292 (371)
T ss_pred ChHHHHHHHHHHhcC--CEEEEEccC
Confidence 222 34444443 367776543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.17 Score=45.45 Aligned_cols=94 Identities=13% Similarity=0.062 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC--H---HHHHHhhc-CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN--K---KFLKTALR-GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D--~---~sL~~AL~-GvDaVIh 169 (209)
.+.++|||.|+ |.+|...++.+...|. +|.++++++++.......+++.+. |..+ + ..+.+... ++|.||.
T Consensus 186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i-~~~~~~~~~~~~v~~~~~~~~d~vid 263 (369)
T cd08301 186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFV-NPKDHDKPVQEVIAEMTGGGVDYSFE 263 (369)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE-cccccchhHHHHHHHHhCCCCCEEEE
Confidence 35779999985 9999999998889998 799999887665432222222211 2222 1 22333332 6899998
Q ss_pred cC-hh-H---HHHHHHhCCCCEEEEeccc
Q 028418 170 PS-EG-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 170 ~a-~g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
+. .. . .+++. +.+-.++|.++..
T Consensus 264 ~~G~~~~~~~~~~~~-~~~~g~~v~~g~~ 291 (369)
T cd08301 264 CTGNIDAMISAFECV-HDGWGVTVLLGVP 291 (369)
T ss_pred CCCChHHHHHHHHHh-hcCCCEEEEECcC
Confidence 72 22 2 23333 2222578877654
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.19 Score=43.20 Aligned_cols=91 Identities=16% Similarity=0.071 Sum_probs=56.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH-HHHHHhh--cCCcEEEEcChhH--
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSEGF-- 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~-~sL~~AL--~GvDaVIh~a~g~-- 174 (209)
.+|||.|++|.+|..+++.+...|.+|.+++++.++.......+++.+. |..+. ..+.+.+ +++|.||.+..+.
T Consensus 148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~ 226 (325)
T cd05280 148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVL-DREDLLDESKKPLLKARWAGAIDTVGGDVL 226 (325)
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEE-cchhHHHHHHHHhcCCCccEEEECCchHHH
Confidence 5899999999999999998899999999999887654332222233221 22222 1233333 3689999873222
Q ss_pred --HHHHHHhCCCCEEEEeccc
Q 028418 175 --ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 --ll~AA~~aGVkriV~vSS~ 193 (209)
.++..... .++|.++..
T Consensus 227 ~~~~~~l~~~--g~~v~~g~~ 245 (325)
T cd05280 227 ANLLKQTKYG--GVVASCGNA 245 (325)
T ss_pred HHHHHhhcCC--CEEEEEecC
Confidence 33333333 467766543
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.13 Score=45.84 Aligned_cols=40 Identities=15% Similarity=0.207 Sum_probs=34.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
.+.++|||.|+ |.+|...++.+...|.+|.++++++++..
T Consensus 165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~ 204 (349)
T TIGR03201 165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLE 204 (349)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 34679999999 99999999999999999999988876654
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.065 Score=48.00 Aligned_cols=63 Identities=11% Similarity=0.165 Sum_probs=45.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhhhc----------CCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESF----------GTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~~~----------~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
++|.|.|+ |.+|+.++..|+.+| ++|.++.|+++++.... +..+.+.. .+ .++++++|.|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~----~~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GD----YSDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CC----HHHhCCCCEE
Confidence 37999996 999999999999999 68999999887654211 11222322 22 2357999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|.+
T Consensus 73 Iit 75 (306)
T cd05291 73 VIT 75 (306)
T ss_pred EEc
Confidence 998
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.041 Score=50.15 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=44.8
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh--hhcC--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM--ESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~--~~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|.|+||+|+||++++..|..++. +++.+++++.... .+.. ....+.... +.+.+.++++|+|.||.+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvit 74 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIP 74 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEe
Confidence 589999999999999999988875 7888887662211 1111 111222101 112356799999999988
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.084 Score=48.47 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=55.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcc-hhhh---cCCc--------eEEEE-ccCCCHHHHHHhhcCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRN-AMES---FGTY--------VESMA-GDASNKKFLKTALRGV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~-a~~~---~~~~--------vevv~-GDl~D~~sL~~AL~Gv 164 (209)
+.+|.|.|+ |.||+.+++.+.++ +.+++++...... ...+ .+.. ++.+. .++.=...+.+.+.++
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v 79 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA 79 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence 458999999 99999999988754 6888888742211 1100 1100 00000 0010011244556789
Q ss_pred cEEEEcC-hh---HHHHHHHhCCCCEEEEeccc
Q 028418 165 RSIICPS-EG---FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 165 DaVIh~a-~g---~ll~AA~~aGVkriV~vSS~ 193 (209)
|+||.++ .. ..+..+.++| +++|+.++.
T Consensus 80 DVVIdaT~~~~~~e~a~~~~~aG-k~VI~~~~~ 111 (341)
T PRK04207 80 DIVVDATPGGVGAKNKELYEKAG-VKAIFQGGE 111 (341)
T ss_pred CEEEECCCchhhHHHHHHHHHCC-CEEEEcCCC
Confidence 9999873 11 2667788889 778877763
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.023 Score=49.89 Aligned_cols=39 Identities=15% Similarity=0.193 Sum_probs=34.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
..++++|+|+ |.+|+.++..|...|++|.+..|+++++.
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~ 154 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAE 154 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4568999998 89999999999999999999999887654
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.07 Score=46.22 Aligned_cols=91 Identities=12% Similarity=0.034 Sum_probs=54.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhhcCCceEEEEccCCC-HHHHHHhh--cCCcEEEEcC--
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTAL--RGVRSIICPS-- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~~~~~vevv~GDl~D-~~sL~~AL--~GvDaVIh~a-- 171 (209)
+.++|||.|+ |.||...++.+...|.+ |.++.+++++.......+++.+. |..+ .+.+.+.. +|+|.||.+.
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i-~~~~~~~~~~~~~~~~g~d~vid~~G~ 197 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALA-EPEVLAERQGGLQNGRGVDVALEFSGA 197 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEec-CchhhHHHHHHHhCCCCCCEEEECCCC
Confidence 5779999987 89999999888889987 77777666554322111232221 2222 23333333 4789999872
Q ss_pred hhH---HHHHHHhCCCCEEEEecc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS 192 (209)
... .++..+.. .++|.++.
T Consensus 198 ~~~~~~~~~~l~~~--G~iv~~G~ 219 (280)
T TIGR03366 198 TAAVRACLESLDVG--GTAVLAGS 219 (280)
T ss_pred hHHHHHHHHHhcCC--CEEEEecc
Confidence 222 33333333 47777764
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.071 Score=46.08 Aligned_cols=92 Identities=13% Similarity=0.049 Sum_probs=56.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC--HHHHHHhh-cCCcEEEEcChhH-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTAL-RGVRSIICPSEGF- 174 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D--~~sL~~AL-~GvDaVIh~a~g~- 174 (209)
..+|||.|++|.+|..+++.+...|.+|.++++++++.......+++.+ .|..+ ...+.+.. .++|.||.+..+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 225 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEV-IPREELQEESIKPLEKQRWAGAVDPVGGKT 225 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEE-EcchhHHHHHHHhhccCCcCEEEECCcHHH
Confidence 4699999999999999999999999999999988866443222223222 11222 23333332 4689999872121
Q ss_pred ---HHHHHHhCCCCEEEEeccc
Q 028418 175 ---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS~ 193 (209)
.++..+.. .++|.++..
T Consensus 226 ~~~~~~~l~~~--G~~i~~g~~ 245 (326)
T cd08289 226 LAYLLSTLQYG--GSVAVSGLT 245 (326)
T ss_pred HHHHHHHhhcC--CEEEEEeec
Confidence 23333332 467776543
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.12 Score=46.64 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=28.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEE-eCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALV-KDKR 134 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLv-R~~~ 134 (209)
+++|+|.||+|..|+.+++.+.+.. +++.+.. |+++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 5789999999999999999988764 6655554 5443
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.12 Score=48.45 Aligned_cols=81 Identities=10% Similarity=0.019 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-----hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-----~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a 171 (209)
..++|+|.|+ |.+|..+++.|.++|++|.++.+++... ..+...+++++.++-.. ...++|.||.. +
T Consensus 15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s~G 87 (480)
T PRK01438 15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTSPG 87 (480)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEECCC
Confidence 3568999996 8899999999999999999998654211 12223467777665432 34568988876 2
Q ss_pred ---hhHHHHHHHhCCCC
Q 028418 172 ---EGFISNAGSLKGVQ 185 (209)
Q Consensus 172 ---~g~ll~AA~~aGVk 185 (209)
.-.++..|++.|++
T Consensus 88 i~~~~~~~~~a~~~gi~ 104 (480)
T PRK01438 88 WRPDAPLLAAAADAGIP 104 (480)
T ss_pred cCCCCHHHHHHHHCCCe
Confidence 11255555666543
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.02 Score=50.52 Aligned_cols=71 Identities=10% Similarity=0.064 Sum_probs=47.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-------C---CceEEEE--------ccCCCHHHHHHh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------G---TYVESMA--------GDASNKKFLKTA 160 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-------~---~~vevv~--------GDl~D~~sL~~A 160 (209)
.++|.|.|+ |.+|+.++..|..+|++|++..++++...... . ....... ..+.-..++.++
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a 81 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA 81 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence 368999985 99999999999999999999999876432110 0 0000000 011111346778
Q ss_pred hcCCcEEEEc
Q 028418 161 LRGVRSIICP 170 (209)
Q Consensus 161 L~GvDaVIh~ 170 (209)
++++|.||.+
T Consensus 82 ~~~aDlViea 91 (287)
T PRK08293 82 VKDADLVIEA 91 (287)
T ss_pred hcCCCEEEEe
Confidence 9999999987
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.065 Score=47.70 Aligned_cols=66 Identities=9% Similarity=-0.033 Sum_probs=44.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|+.+++.|+++|++|.+..|++++.......++.. ..+++.+.+....+|.||.+
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~s~~~~~~~~~~advVi~~ 66 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITA----RHSLEELVSKLEAPRTIWVM 66 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee----cCCHHHHHHhCCCCCEEEEE
Confidence 3688886 899999999999999999999999887654332222222 22333333333346777766
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.1 Score=42.82 Aligned_cols=68 Identities=12% Similarity=0.134 Sum_probs=46.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+..+++|||.| .|.+|.+.++.|++.|++|+++..........+ ..+++....+... -++++|.||.+
T Consensus 10 ~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp~~~~~l~~l-~~i~~~~~~~~~~-----dl~~a~lViaa 77 (157)
T PRK06719 10 NLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSPEICKEMKEL-PYITWKQKTFSND-----DIKDAHLIYAA 77 (157)
T ss_pred EcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCccCHHHHhc-cCcEEEecccChh-----cCCCceEEEEC
Confidence 45678899998 589999999999999999998853222211112 2355554444332 26889999987
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.031 Score=52.84 Aligned_cols=71 Identities=13% Similarity=0.148 Sum_probs=53.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++|||.|+ |.+|+.++..|...|. ++.+..|+.+++..+... .. .+.+...+.+.+++..+|.||.+
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-~~--~~~~~~~~~l~~~l~~aDiVI~a 249 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-FR--NASAHYLSELPQLIKKADIIIAA 249 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-hc--CCeEecHHHHHHHhccCCEEEEC
Confidence 455679999998 9999999999999995 688888988776543221 10 02233446778889999999998
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.19 Score=45.42 Aligned_cols=95 Identities=19% Similarity=0.106 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC--H---HHHHHhhc-CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN--K---KFLKTALR-GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D--~---~sL~~AL~-GvDaVIh 169 (209)
.+.++|||+|+ |.||...++.+...|. +|.++++++++......-+++.+ .|..+ . +.+.++.. |+|.||.
T Consensus 184 ~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~-i~~~~~~~~~~~~v~~~~~~g~d~vid 261 (368)
T TIGR02818 184 EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDC-VNPNDYDKPIQEVIVEITDGGVDYSFE 261 (368)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeE-EcccccchhHHHHHHHHhCCCCCEEEE
Confidence 34679999986 9999999988888998 79888887766443222223221 13322 1 23434433 7999998
Q ss_pred cC--hhHHHHHH--HhCCCCEEEEeccc
Q 028418 170 PS--EGFISNAG--SLKGVQHVILLSQR 193 (209)
Q Consensus 170 ~a--~g~ll~AA--~~aGVkriV~vSS~ 193 (209)
+. ...+.++. .+.+-.++|.++..
T Consensus 262 ~~G~~~~~~~~~~~~~~~~G~~v~~g~~ 289 (368)
T TIGR02818 262 CIGNVNVMRAALECCHKGWGESIIIGVA 289 (368)
T ss_pred CCCCHHHHHHHHHHhhcCCCeEEEEecc
Confidence 72 22222222 22333578877653
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.14 Score=48.93 Aligned_cols=85 Identities=14% Similarity=0.084 Sum_probs=57.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--- 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a--- 171 (209)
..+.++|+|.| .|-+|...++.|..+|++|.+.++++.....+...+++++.++. + .+.++++|.||.. +
T Consensus 9 ~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~-~----~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 9 LLPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSD-A----VQQIADYALVVTSPGFRP 82 (488)
T ss_pred ccCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcc-h----HhHhhcCCEEEECCCCCC
Confidence 44567899999 77899999999999999999988665433222223566654433 1 2345778988876 2
Q ss_pred hhHHHHHHHhCCCCE
Q 028418 172 EGFISNAGSLKGVQH 186 (209)
Q Consensus 172 ~g~ll~AA~~aGVkr 186 (209)
.-.++.+|++.|++-
T Consensus 83 ~~p~~~~a~~~gi~v 97 (488)
T PRK03369 83 TAPVLAAAAAAGVPI 97 (488)
T ss_pred CCHHHHHHHHCCCcE
Confidence 223677777777653
|
|
| >PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.17 Score=46.72 Aligned_cols=89 Identities=10% Similarity=0.024 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEc--Chh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP--SEG 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~--a~g 173 (209)
...+|+|-|=||..|+.-+++.++.|-+|++-|-..+--.... ...+-=-+++.++.+. +|.++.+ +..
T Consensus 28 ~~t~v~vqGitg~~g~~h~~~~~~ygt~iv~GV~Pgkgg~~v~-------~~Gvpvy~sv~ea~~~~~~D~avI~VPa~~ 100 (317)
T PTZ00187 28 KNTKVICQGITGKQGTFHTEQAIEYGTKMVGGVNPKKAGTTHL-------KHGLPVFATVKEAKKATGADASVIYVPPPH 100 (317)
T ss_pred CCCeEEEecCCChHHHHHHHHHHHhCCcEEEEECCCCCCceEe-------cCCccccCCHHHHhcccCCCEEEEecCHHH
Confidence 3469999999999999999999999999999994333111111 1123333467777765 8987766 221
Q ss_pred --HHHHHHHhCCCCEEEEeccc
Q 028418 174 --FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS~ 193 (209)
..+..|.++|++.+|.+|+.
T Consensus 101 v~dai~Ea~~aGI~~~ViiteG 122 (317)
T PTZ00187 101 AASAIIEAIEAEIPLVVCITEG 122 (317)
T ss_pred HHHHHHHHHHcCCCEEEEECCC
Confidence 14555678999999998874
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.23 Score=44.71 Aligned_cols=95 Identities=15% Similarity=0.051 Sum_probs=57.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCH-----HHHHHhhc-CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK-----KFLKTALR-GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~-----~sL~~AL~-GvDaVIh 169 (209)
.+.++|||+|+ |.+|...++.+...|. +|.++++++++......-+++.+ .|..+. +.+.+... |+|.||.
T Consensus 185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~v~~~~~~g~d~vid 262 (368)
T cd08300 185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDC-VNPKDHDKPIQQVLVEMTDGGVDYTFE 262 (368)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEE-EcccccchHHHHHHHHHhCCCCcEEEE
Confidence 45779999975 9999999999999999 69899888876543221223222 233322 22333332 6999998
Q ss_pred cC--hhHHHHHHH--hCCCCEEEEeccc
Q 028418 170 PS--EGFISNAGS--LKGVQHVILLSQR 193 (209)
Q Consensus 170 ~a--~g~ll~AA~--~aGVkriV~vSS~ 193 (209)
+. ...+.++.. +.+-.++|.++..
T Consensus 263 ~~g~~~~~~~a~~~l~~~~G~~v~~g~~ 290 (368)
T cd08300 263 CIGNVKVMRAALEACHKGWGTSVIIGVA 290 (368)
T ss_pred CCCChHHHHHHHHhhccCCCeEEEEccC
Confidence 72 223222222 2233588877643
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.32 Score=41.26 Aligned_cols=99 Identities=11% Similarity=0.117 Sum_probs=63.9
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcc-------------------h------hhhcCCc--eEE
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN-------------------A------MESFGTY--VES 146 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~-------------------a------~~~~~~~--vev 146 (209)
+...+.+|+|.|+.| +|.++++.|...|.. ++.++.+.-. + .....+. +++
T Consensus 17 ~~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~ 95 (197)
T cd01492 17 KRLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSV 95 (197)
T ss_pred HHHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEE
Confidence 344577999999877 999999999999975 6666533210 0 0112233 344
Q ss_pred EEccCCCHHHHHHhhcCCcEEEEcC--hh---HHHHHHHhCCCCEEEEeccccccc
Q 028418 147 MAGDASNKKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 147 v~GDl~D~~sL~~AL~GvDaVIh~a--~g---~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
....+.+ ...+-++++|.||.+. .. .+-++|++.++. +|+.++.+.+|
T Consensus 96 ~~~~~~~--~~~~~~~~~dvVi~~~~~~~~~~~ln~~c~~~~ip-~i~~~~~G~~G 148 (197)
T cd01492 96 DTDDISE--KPEEFFSQFDVVVATELSRAELVKINELCRKLGVK-FYATGVHGLFG 148 (197)
T ss_pred EecCccc--cHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEecCCEE
Confidence 4444542 2345578999999872 22 266788999975 67777766554
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.19 Score=46.88 Aligned_cols=81 Identities=15% Similarity=0.106 Sum_probs=54.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcC---CceEEEEccCCCHHHHHHhhcCCcEEEEc-C--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFG---TYVESMAGDASNKKFLKTALRGVRSIICP-S-- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~---~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a-- 171 (209)
.++|+|+|+ |.+|..+++.|.++|++|.+..+++... ...+. .++.+..+...+ ..+.++|.||.. +
T Consensus 5 ~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~-----~~~~~~d~vv~spgi~ 78 (445)
T PRK04308 5 NKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALSPGIS 78 (445)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCH-----HHHhCCCEEEECCCCC
Confidence 568999997 4799999999999999999998765432 11121 357776665432 134688999986 2
Q ss_pred h-hHHHHHHHhCCCC
Q 028418 172 E-GFISNAGSLKGVQ 185 (209)
Q Consensus 172 ~-g~ll~AA~~aGVk 185 (209)
. -..+.+|++.|++
T Consensus 79 ~~~p~~~~a~~~~i~ 93 (445)
T PRK04308 79 ERQPDIEAFKQNGGR 93 (445)
T ss_pred CCCHHHHHHHHcCCc
Confidence 1 1255666666654
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.027 Score=52.28 Aligned_cols=70 Identities=14% Similarity=0.042 Sum_probs=47.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEE------------E-EccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVES------------M-AGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vev------------v-~GDl~D~~sL~~AL~GvDa 166 (209)
|+|.|.| .|.+|..++..|.++||+|.+..|++++...+......+ + .+-+.-..++.++++++|.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 4688886 699999999999999999999999887654332110000 0 0111112245677899999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
||.+
T Consensus 80 vii~ 83 (411)
T TIGR03026 80 IIIC 83 (411)
T ss_pred EEEE
Confidence 9987
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.066 Score=51.31 Aligned_cols=71 Identities=11% Similarity=-0.038 Sum_probs=48.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC---------C---ceEE-EEccCCCHHHHHHhhcCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---------T---YVES-MAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~---------~---~vev-v~GDl~D~~sL~~AL~GvD 165 (209)
-++|.|. |+|.+|+.++..|+.+|++|++..|++++...... . .... ..+.+.=.+++.++++++|
T Consensus 4 i~kIavI-G~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD 82 (495)
T PRK07531 4 IMKAACI-GGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD 82 (495)
T ss_pred cCEEEEE-CcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence 3578888 58999999999999999999999998876432100 0 0000 0111111235678899999
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.||.+
T Consensus 83 ~Viea 87 (495)
T PRK07531 83 WIQES 87 (495)
T ss_pred EEEEc
Confidence 99987
|
|
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.085 Score=44.35 Aligned_cols=72 Identities=21% Similarity=0.188 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~ 170 (209)
+..+++|+|++|-+|..+++.+...|.+|.+++++.++.......+++.+ .+..+.+ .+.+.. +++|.+|++
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVA-INYRTEDFAEEVKEATGGRGVDVILDM 215 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEE-EeCCchhHHHHHHHHhCCCCeEEEEEC
Confidence 56799999999999999999999999999999887654332211112211 2223322 233333 368999987
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.056 Score=47.99 Aligned_cols=85 Identities=13% Similarity=0.086 Sum_probs=50.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH--CCCcEEEEE-eCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEcC-hh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV--KRTRIKALV-KDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~--~G~~VraLv-R~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~g 173 (209)
..+|.|.| .|.||+.+++.|.. .++++.++. |+++++...... +...+ +.+. ++.+..+|+|+.+. ..
T Consensus 6 ~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~---~~~~---eell~~~D~Vvi~tp~~ 78 (271)
T PRK13302 6 ELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPP---VVPL---DQLATHADIVVEAAPAS 78 (271)
T ss_pred eeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcc---cCCH---HHHhcCCCEEEECCCcH
Confidence 36899998 59999999999986 378887654 565554322110 11001 2343 44467899999872 11
Q ss_pred ---HHHHHHHhCCCCEEEEec
Q 028418 174 ---FISNAGSLKGVQHVILLS 191 (209)
Q Consensus 174 ---~ll~AA~~aGVkriV~vS 191 (209)
.+...+.++| ++++..|
T Consensus 79 ~h~e~~~~aL~aG-k~Vi~~s 98 (271)
T PRK13302 79 VLRAIVEPVLAAG-KKAIVLS 98 (271)
T ss_pred HHHHHHHHHHHcC-CcEEEec
Confidence 1444555566 4555544
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.025 Score=49.35 Aligned_cols=69 Identities=13% Similarity=0.121 Sum_probs=45.9
Q ss_pred EEEEcCCCHHHHHHHHHHHHCC----CcEEEEEeCCcchhhh---cCCceEEE-EccCCCHHHHHHhhcCCcEEEEc
Q 028418 102 VLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMES---FGTYVESM-AGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G----~~VraLvR~~~~a~~~---~~~~vevv-~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|.|+||+|.+|..++..|+..+ .+|..++++++++... +....... ...+.-...+.++++++|.||.+
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t 77 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIIT 77 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEEC
Confidence 5799999999999999999888 7899999877654311 00000000 01111112357889999999996
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.086 Score=51.07 Aligned_cols=66 Identities=15% Similarity=0.081 Sum_probs=49.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++++|.| -|.||+.+++.|...|.+|.+..+++.+.......+++++ .+.++++.+|.||.+
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~--------~leell~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV--------TLEDVVETADIFVTA 316 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec--------cHHHHHhcCCEEEEC
Confidence 45678999999 5689999999999999999999888766532222233332 366788999999876
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.076 Score=50.37 Aligned_cols=65 Identities=17% Similarity=0.046 Sum_probs=49.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..+++|+|.| .|.||+.+++.|...|.+|.+..+++.++......+++++ .+.++++++|.||.+
T Consensus 193 l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~--------~leeal~~aDVVIta 257 (406)
T TIGR00936 193 IAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM--------TMEEAAKIGDIFITA 257 (406)
T ss_pred CCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC--------CHHHHHhcCCEEEEC
Confidence 4677899998 7899999999999999999999888876543332333332 134577899999887
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.32 Score=42.25 Aligned_cols=93 Identities=9% Similarity=0.021 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccCCC-HHHHHHhhc--CCcEEEEcChh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASN-KKFLKTALR--GVRSIICPSEG 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl~D-~~sL~~AL~--GvDaVIh~a~g 173 (209)
+..+++|.||+|.+|..+++.+...|.+|.++++++++.......++ +++..+-.+ .+.+.++.. ++|.++.+..+
T Consensus 140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~ 219 (327)
T PRK10754 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGK 219 (327)
T ss_pred CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcH
Confidence 46799999999999999999999999999999887765432211122 333222222 233445544 58999877322
Q ss_pred H----HHHHHHhCCCCEEEEecc
Q 028418 174 F----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 174 ~----ll~AA~~aGVkriV~vSS 192 (209)
. .++..... .|+|.++.
T Consensus 220 ~~~~~~~~~l~~~--g~~v~~g~ 240 (327)
T PRK10754 220 DTWEASLDCLQRR--GLMVSFGN 240 (327)
T ss_pred HHHHHHHHHhccC--CEEEEEcc
Confidence 2 23333333 47777654
|
|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.15 Score=48.37 Aligned_cols=84 Identities=12% Similarity=0.084 Sum_probs=56.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C--
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP-S-- 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a-- 171 (209)
+..+++|+|.| .|-.|..+++.|+.+|++|.+.+|++...... ...++++..+.-. ++ -+.++|.||.. +
T Consensus 12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~-~~----~~~~~d~vV~Spgi~ 85 (473)
T PRK00141 12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEA-SD----QLDSFSLVVTSPGWR 85 (473)
T ss_pred cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCc-hh----HhcCCCEEEeCCCCC
Confidence 44567899999 77899999999999999999998766543322 2235666655322 22 24678888876 2
Q ss_pred hh-HHHHHHHhCCCC
Q 028418 172 EG-FISNAGSLKGVQ 185 (209)
Q Consensus 172 ~g-~ll~AA~~aGVk 185 (209)
.. ..+.+|++.|++
T Consensus 86 ~~~p~~~~a~~~gi~ 100 (473)
T PRK00141 86 PDSPLLVDAQSQGLE 100 (473)
T ss_pred CCCHHHHHHHHCCCc
Confidence 11 256666666653
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.096 Score=48.72 Aligned_cols=94 Identities=12% Similarity=0.077 Sum_probs=60.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcChhH-
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a~g~- 174 (209)
..|.++|+|+|+. -+|.+-++.+...|.+|.+++|++++.+....-+.+.+.-.- |++.+.+.-+-+|.+|.+....
T Consensus 164 ~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~-~~~~~~~~~~~~d~ii~tv~~~~ 241 (339)
T COG1064 164 VKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS-DSDALEAVKEIADAIIDTVGPAT 241 (339)
T ss_pred CCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcC-CchhhHHhHhhCcEEEECCChhh
Confidence 5567899999998 899888888888999999999999887433222233333222 6655554444489998872122
Q ss_pred ---HHHHHHhCCCCEEEEeccc
Q 028418 175 ---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS~ 193 (209)
.+++.+..| ++|.+.-.
T Consensus 242 ~~~~l~~l~~~G--~~v~vG~~ 261 (339)
T COG1064 242 LEPSLKALRRGG--TLVLVGLP 261 (339)
T ss_pred HHHHHHHHhcCC--EEEEECCC
Confidence 334444333 45555443
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.45 Score=40.84 Aligned_cols=99 Identities=12% Similarity=0.057 Sum_probs=63.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCc-------------------chh------hhcCCc--eEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKR-------------------NAM------ESFGTY--VESM 147 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~-------------------~a~------~~~~~~--vevv 147 (209)
...+.+|+|.| .|-+|+++++.|...|.. +.+++.+.- ++. ....+. ++.+
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 44567899999 567999999999999974 444432210 000 011122 4555
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh-----hHHHHHHHhCCCCEEEEeccccccc
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
...+ +.+.+.+.++++|.||.+.+ -.+-++|.+.++ .+|+.+..+.+|
T Consensus 97 ~~~i-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~i-p~i~~g~~g~~g 149 (228)
T cd00757 97 NERL-DAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGK-PLVSGAVLGFEG 149 (228)
T ss_pred ccee-CHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 5555 35667788999999998831 126677888886 467766555443
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.12 Score=44.45 Aligned_cols=72 Identities=11% Similarity=0.009 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC----HHHHHHhh--cCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN----KKFLKTAL--RGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D----~~sL~~AL--~GvDaVIh~ 170 (209)
+..+|||+||+|.+|+.+++.+...|.+|.++++++++.......+++.+ .+..+ ...+.+.. +++|.+|.+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 217 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIIL-IRYPDEEGFAPKVKKLTGEKGVNLVLDC 217 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEE-EecCChhHHHHHHHHHhCCCCceEEEEC
Confidence 46799999999999999999999999998888887765432211122211 12222 22344444 468999987
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.064 Score=47.14 Aligned_cols=63 Identities=13% Similarity=0.101 Sum_probs=45.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC----CcEEEEEeCCc-chhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKR-NAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G----~~VraLvR~~~-~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.+.| +|.+|+.+++.|+++| ++|.+..|+++ +...... .+++.. . +..++++.+|.||.+
T Consensus 4 mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~----~---~~~e~~~~aDvVila 72 (279)
T PRK07679 4 QNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGT----H---NKKELLTDANILFLA 72 (279)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEe----C---CHHHHHhcCCEEEEE
Confidence 5899998 9999999999999998 78999888764 3332211 123322 2 234567889999987
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.058 Score=49.38 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=44.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCC--cchh----hhcCCceEEEEccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDK--RNAM----ESFGTYVESMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~--~~a~----~~~~~~vevv~GDl~D~~sL~~AL~GvDa 166 (209)
.+|.|+||+|++|++++..|+.++. +++.+++++ +++. .+.... .....++.-.....++++++|.
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~-~~~~~~~~i~~~~~~~~~daDv 82 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCA-FPLLAGVVATTDPEEAFKDVDA 82 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcc-ccccCCcEEecChHHHhCCCCE
Confidence 4899999999999999999988874 788888754 2221 111100 0000111001223578999999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
||.+
T Consensus 83 VVit 86 (323)
T TIGR01759 83 ALLV 86 (323)
T ss_pred EEEe
Confidence 9998
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.16 Score=44.43 Aligned_cols=69 Identities=13% Similarity=0.010 Sum_probs=43.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEc--cC----CCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAG--DA----SNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~G--Dl----~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|+|.| .|.+|..++..|.++|++|..+.| +++.......++.+... +. .-.....++.+.+|.||.+
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vila 75 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILA 75 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEE
Confidence 4789995 599999999999999999999999 54433222122222111 11 0011233455889999887
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.47 Score=41.55 Aligned_cols=96 Identities=10% Similarity=0.057 Sum_probs=63.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc-------------------chh------hhcCCc--eEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAM------ESFGTY--VESM 147 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~-------------------~a~------~~~~~~--vevv 147 (209)
...+.+|+|.|+ |-+|+.+++.|...|. ++++++.+.- ++. ....+. ++.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~ 107 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI 107 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 456779999999 9999999999999996 5666653321 110 111233 3445
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh-----hHHHHHHHhCCCCEEEEecccc
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~aGVkriV~vSS~~ 194 (209)
...++ ++.+.+.++++|.||.+.+ -.+-++|++.++. +|+.++.+
T Consensus 108 ~~~i~-~~~~~~~~~~~DiVi~~~D~~~~r~~ln~~~~~~~ip-~v~~~~~g 157 (245)
T PRK05690 108 NARLD-DDELAALIAGHDLVLDCTDNVATRNQLNRACFAAKKP-LVSGAAIR 157 (245)
T ss_pred eccCC-HHHHHHHHhcCCEEEecCCCHHHHHHHHHHHHHhCCE-EEEeeecc
Confidence 55554 4567778999999998832 1266778888855 66655543
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.097 Score=44.36 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccCCC-HHHHHHhhc--CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASN-KKFLKTALR--GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl~D-~~sL~~AL~--GvDaVIh~ 170 (209)
+..+|+|+|++|.+|+.+++.+...|.+|.+++++..+.......++ .++..+..+ ...+.+... ++|.+|.+
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 220 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDP 220 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence 45699999999999999999999999999999987755432211122 222222212 122333343 68999987
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.097 Score=47.56 Aligned_cols=64 Identities=16% Similarity=0.136 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++|.|.| .|.||+.+++.|...|.+|.+..|.++... +++.+ ...+++.++++.+|.|+++
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv~~ 197 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLINL 197 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEEEC
Confidence 3456888886 899999999999999999999987654321 12221 2355789999999999876
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.052 Score=46.55 Aligned_cols=28 Identities=7% Similarity=0.075 Sum_probs=26.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIK 127 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~Vr 127 (209)
++|.|.||+|.+|+.+++.|.+.|+.|.
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 4899999999999999999999999986
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.16 Score=46.51 Aligned_cols=91 Identities=10% Similarity=0.049 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-hh-H
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG-F 174 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~g-~ 174 (209)
+.++|+|.|+ |.+|...++.+...|.+|.+++++.++ .......+++.+. |..+.+.+.+...++|.||-+. .. .
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i-~~~~~~~v~~~~~~~D~vid~~G~~~~ 255 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFL-VTTDSQKMKEAVGTMDFIIDTVSAEHA 255 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEE-cCcCHHHHHHhhCCCcEEEECCCcHHH
Confidence 5789999986 999999999899999999998876543 2111112233322 3344556666667899999872 11 2
Q ss_pred ---HHHHHHhCCCCEEEEecc
Q 028418 175 ---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS 192 (209)
.++..+.. .++|.++.
T Consensus 256 ~~~~~~~l~~~--G~iv~vG~ 274 (375)
T PLN02178 256 LLPLFSLLKVS--GKLVALGL 274 (375)
T ss_pred HHHHHHhhcCC--CEEEEEcc
Confidence 33333332 57887764
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.084 Score=48.41 Aligned_cols=65 Identities=14% Similarity=0.008 Sum_probs=44.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCCc--chh----hhc------CCceEEEEccCCCHHHHHH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKR--NAM----ESF------GTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~~--~a~----~~~------~~~vevv~GDl~D~~sL~~ 159 (209)
..+|.|+||+|++|++++..|+..+. ++..+++++. ++. .+. ..++.+. ....+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-------~~~y~ 76 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-------DDPNV 76 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-------cChHH
Confidence 34899999999999999998887664 6888877442 221 111 0122221 12357
Q ss_pred hhcCCcEEEEc
Q 028418 160 ALRGVRSIICP 170 (209)
Q Consensus 160 AL~GvDaVIh~ 170 (209)
+++|+|.||.+
T Consensus 77 ~~~daDiVVit 87 (326)
T PRK05442 77 AFKDADVALLV 87 (326)
T ss_pred HhCCCCEEEEe
Confidence 89999999988
|
|
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.28 Score=44.76 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhhcCCceEEEEccCCCH-----HHHHHhhc-CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGTYVESMAGDASNK-----KFLKTALR-GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~~~~~vevv~GDl~D~-----~sL~~AL~-GvDaVIh~ 170 (209)
+.++|||+|+ |.+|..+++.+...|.. |.+..+++++.......+++.+ .|..++ +.+.+... |+|.||.+
T Consensus 193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~-i~~~~~~~~~~~~v~~~~~~g~d~vid~ 270 (378)
T PLN02827 193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDF-INPNDLSEPIQQVIKRMTGGGADYSFEC 270 (378)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEE-EcccccchHHHHHHHHHhCCCCCEEEEC
Confidence 4679999985 99999999988889985 6666666655432212223322 233321 22333332 79999987
Q ss_pred -C-hhH---HHHHHHhCCCCEEEEecc
Q 028418 171 -S-EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 171 -a-~g~---ll~AA~~aGVkriV~vSS 192 (209)
. ... .++.++ .|-.++|.++.
T Consensus 271 ~G~~~~~~~~l~~l~-~g~G~iv~~G~ 296 (378)
T PLN02827 271 VGDTGIATTALQSCS-DGWGLTVTLGV 296 (378)
T ss_pred CCChHHHHHHHHhhc-cCCCEEEEECC
Confidence 2 223 233332 33357777654
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.14 Score=44.04 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccC-CCHHHHHHhh--cCCcEEEEcC-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDA-SNKKFLKTAL--RGVRSIICPS- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl-~D~~sL~~AL--~GvDaVIh~a- 171 (209)
.+..+|||.|++|.+|..+++.+...|.+|.+++++.++.......++ +++..+- .....+.+.. +++|.|+.+.
T Consensus 137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence 356799999999999999999999999999999987765432211122 2222111 1122233343 4789999872
Q ss_pred -hhH--HHHHHHhCCCCEEEEeccc
Q 028418 172 -EGF--ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 -~g~--ll~AA~~aGVkriV~vSS~ 193 (209)
... .++..+.. .++|.++..
T Consensus 217 ~~~~~~~~~~l~~~--g~~v~~g~~ 239 (323)
T cd05282 217 GESATRLARSLRPG--GTLVNYGLL 239 (323)
T ss_pred CHHHHHHHHhhCCC--CEEEEEccC
Confidence 111 23332222 467776544
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.077 Score=49.65 Aligned_cols=55 Identities=13% Similarity=0.113 Sum_probs=41.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+++|+|.|.+|.||+.+++.|.+. +++|++.+|+.+. ..+ ..++++++|.||.+
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~---------------~~~---~~~~v~~aDlVila 58 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG---------------SLD---PATLLQRADVLIFS 58 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc---------------cCC---HHHHhcCCCEEEEe
Confidence 4679999999999999999999875 8888888763111 112 34567888888877
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.19 Score=45.37 Aligned_cols=91 Identities=11% Similarity=0.058 Sum_probs=56.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--hhH
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS--EGF 174 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a--~g~ 174 (209)
+.++|||.|+ |.||..+++.+...|.+|.+++.+.++.... ...+++.+. |..+++.+.+...++|.||-+. ..+
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi-~~~~~~~~~~~~~~~D~vid~~g~~~~ 260 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFL-VSTDPEKMKAAIGTMDYIIDTVSAVHA 260 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEE-cCCCHHHHHhhcCCCCEEEECCCCHHH
Confidence 5679999775 9999999998889999998887665442211 112233222 3344456666666899999872 222
Q ss_pred ---HHHHHHhCCCCEEEEecc
Q 028418 175 ---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS 192 (209)
.++..+.. .++|.++.
T Consensus 261 ~~~~~~~l~~~--G~iv~vG~ 279 (360)
T PLN02586 261 LGPLLGLLKVN--GKLITLGL 279 (360)
T ss_pred HHHHHHHhcCC--cEEEEeCC
Confidence 33333333 46776653
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.11 Score=49.46 Aligned_cols=65 Identities=18% Similarity=0.140 Sum_probs=49.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.++|+|.|+ |.||+.++..|...|.+|.+..+++.+.......+++.+ + +.++++++|.||.+
T Consensus 200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-----~---~~e~v~~aDVVI~a 264 (413)
T cd00401 200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-----T---MEEAVKEGDIFVTT 264 (413)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-----c---HHHHHcCCCEEEEC
Confidence 46779999985 689999999999999999998888876544333344433 1 24677899999987
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.058 Score=49.02 Aligned_cols=62 Identities=10% Similarity=0.017 Sum_probs=44.3
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-hcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|.+.| .|..|..++..|+++||+|++..|+++++.. ....+++. .++..++.+++|.||.+
T Consensus 2 kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~-------a~s~~eaa~~aDvVitm 64 (286)
T COG2084 2 KIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATV-------AASPAEAAAEADVVITM 64 (286)
T ss_pred eEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcc-------cCCHHHHHHhCCEEEEe
Confidence 455554 8999999999999999999999999988432 22222322 12336677778888766
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.13 Score=43.48 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~a~ 172 (209)
+..+++|+|++|.+|..+++.+...|.+|.++.+++++.......++..+ .+..+++ .+.+.. +++|.++.+..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ 217 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIA-INYREEDFVEVVKAETGGKGVDVILDIVG 217 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEE-EecCchhHHHHHHHHcCCCCeEEEEECCc
Confidence 46799999999999999999999999999999887765432211112211 1222222 233333 36899998732
Q ss_pred hH----HHHHHHhCCCCEEEEeccc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS~ 193 (209)
+. .++..... .++|.++..
T Consensus 218 ~~~~~~~~~~l~~~--g~~v~~g~~ 240 (325)
T TIGR02824 218 GSYLNRNIKALALD--GRIVQIGFQ 240 (325)
T ss_pred hHHHHHHHHhhccC--cEEEEEecC
Confidence 21 23333223 477776543
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.054 Score=49.64 Aligned_cols=66 Identities=15% Similarity=0.065 Sum_probs=46.4
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|.|.| +|.+|+.+++.|..+|++|.+..+++.........+..++. + ....+.++++.+|.||.+
T Consensus 2 ~I~iIG-~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~-~--~~~~~~~~~~~aDlVila 67 (359)
T PRK06545 2 TVLIVG-LGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVID-E--LAADLQRAAAEADLIVLA 67 (359)
T ss_pred eEEEEE-eCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCc-c--cccCHHHHhcCCCEEEEe
Confidence 678885 69999999999999999999999988764322111111110 1 113466788999999987
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.12 Score=46.03 Aligned_cols=91 Identities=11% Similarity=0.034 Sum_probs=55.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCH--HHHHHhhcCCcEEEEcC--h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK--KFLKTALRGVRSIICPS--E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~--~sL~~AL~GvDaVIh~a--~ 172 (209)
+.++|||+|+ |.+|...++.+...|. +|.++++++++......-+++.+ .|..+. ..+.+...++|.||-+. .
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~~~g~~D~vid~~G~~ 246 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKL-VNPQNDDLDHYKAEKGYFDVSFEVSGHP 246 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEE-ecCCcccHHHHhccCCCCCEEEECCCCH
Confidence 5679999986 9999999988888998 58888888766543222233332 133332 22222223489999872 2
Q ss_pred hH---HHHHHHhCCCCEEEEecc
Q 028418 173 GF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g~---ll~AA~~aGVkriV~vSS 192 (209)
.+ .+++.+.. .++|.++.
T Consensus 247 ~~~~~~~~~l~~~--G~iv~~G~ 267 (343)
T PRK09880 247 SSINTCLEVTRAK--GVMVQVGM 267 (343)
T ss_pred HHHHHHHHHhhcC--CEEEEEcc
Confidence 22 34444433 46777653
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.096 Score=48.70 Aligned_cols=68 Identities=12% Similarity=-0.016 Sum_probs=49.9
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+....++|.|.|- |.+|+.+++.|...|++|++..|...........++++ .++.++++.+|.|+.+
T Consensus 11 ~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaak~ADVV~ll 78 (335)
T PRK13403 11 VELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEV--------MSVSEAVRTAQVVQML 78 (335)
T ss_pred hhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEE--------CCHHHHHhcCCEEEEe
Confidence 35667789999985 99999999999999999999887533322111123332 1578999999999866
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.088 Score=48.42 Aligned_cols=73 Identities=12% Similarity=0.101 Sum_probs=46.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcchhhh---cCC-----ceEEEEccCCC-H---HHHHHhhc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMES---FGT-----YVESMAGDASN-K---KFLKTALR 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a~~~---~~~-----~vevv~GDl~D-~---~sL~~AL~ 162 (209)
+..+|||.||+|.+|...++.+...|. +|.++++++++.... ++. +++....|..+ . +.+.+...
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~ 254 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG 254 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence 457999999999999999887777664 798888877654322 111 23322234332 1 22333333
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
|+|.||.+
T Consensus 255 g~g~D~vid~ 264 (410)
T cd08238 255 GQGFDDVFVF 264 (410)
T ss_pred CCCCCEEEEc
Confidence 68999986
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.099 Score=48.12 Aligned_cols=74 Identities=9% Similarity=0.035 Sum_probs=50.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-c---CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-F---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~---~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++|+|.|- |.||+.+++.|...|.+|.+..|+..+.... + ...++.+........++.++++.+|.|+.+
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 355779999986 9999999999999999999998764322111 0 011111111112456799999999999865
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.049 Score=48.50 Aligned_cols=70 Identities=7% Similarity=-0.022 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcC---CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG---TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~---~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..+++||.|| |..++.++..|...|. +|.++.|+++++..+.. ....+.. +...+.+..++..+|.||++
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEEC
Confidence 4568999987 8899999999999996 69999999887754421 1111111 22223455667889999987
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 209 | |||
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.83 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.83 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.83 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.83 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.83 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.82 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.82 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.82 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.81 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.8 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.8 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.8 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.8 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.79 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.79 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.79 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.79 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.78 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.78 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.78 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.78 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.78 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.78 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.78 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.78 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.78 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.77 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.77 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.77 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.77 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.77 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.77 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.77 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.77 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.76 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.76 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.76 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.76 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.76 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.75 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.75 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.75 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.75 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.75 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.75 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.75 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.75 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.75 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.74 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.74 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.74 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.74 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.74 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.74 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.74 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.73 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.73 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.72 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.72 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.72 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.72 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.71 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.71 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.71 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.71 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.7 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.7 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.7 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.7 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.69 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.69 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.69 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.68 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.68 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.68 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.68 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.67 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.67 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.66 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.66 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.65 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.65 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.65 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.65 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.64 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.63 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.62 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.59 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.57 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.56 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.56 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.55 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.55 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.54 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.54 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.53 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.53 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.53 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.52 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.51 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.51 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.51 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.5 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.5 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.5 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.5 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.49 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.49 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.49 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.49 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.49 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.49 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.49 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.49 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.49 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.49 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.49 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.48 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.48 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.48 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.48 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.48 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.48 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.48 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.47 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.47 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.47 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.47 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.47 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.46 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.46 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.46 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.46 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.46 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.46 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.45 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.45 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.45 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.45 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.45 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.45 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.44 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.44 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.44 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.44 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.44 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.44 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.44 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.44 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.44 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.44 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.44 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.44 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.43 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.43 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.43 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.43 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.42 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.42 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.42 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.42 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.42 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.41 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.41 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.41 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.41 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.4 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.4 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.4 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.4 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.4 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.4 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.4 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.39 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.39 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.39 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.39 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.39 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.39 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.39 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.39 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.38 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.38 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.38 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.38 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.38 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.38 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.38 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.37 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.37 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.37 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.37 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.37 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.37 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.37 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.37 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.36 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.36 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.36 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.36 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.36 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.35 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.35 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.35 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.35 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.35 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.35 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.35 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.35 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.34 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.34 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.34 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.34 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.34 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.33 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.33 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.33 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.32 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.32 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.32 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.32 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.32 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.32 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.32 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.32 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.32 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.32 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.32 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.32 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.32 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.32 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.31 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.31 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.31 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.31 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.3 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.3 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.3 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.3 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.3 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.29 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.29 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.28 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.28 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.28 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.27 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.27 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.27 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.27 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.26 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.26 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.25 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.24 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.24 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.24 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.24 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.24 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.24 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.24 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.23 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.23 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.23 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.23 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.23 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.22 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.22 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 99.22 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.21 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.2 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.2 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.19 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.19 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.19 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.19 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.19 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.18 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.17 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.17 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.15 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.15 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.15 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.15 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.15 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 99.15 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.13 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.13 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.11 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 99.09 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.09 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.08 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 99.08 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 99.05 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.05 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.01 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.01 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.97 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.95 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.93 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.92 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.9 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.89 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.88 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.87 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.83 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.82 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.8 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.8 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.79 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.78 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.78 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.78 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.75 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.73 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.72 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.65 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.64 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.63 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.57 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.47 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 98.46 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.46 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.46 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.44 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.43 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 98.43 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.38 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.32 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.27 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.27 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.26 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.16 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 98.12 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 98.11 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.06 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 98.05 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.01 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.01 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.0 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.0 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.97 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 97.94 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.93 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.89 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.87 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.87 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.86 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.83 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.82 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.82 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.79 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.78 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.76 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.74 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.73 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.73 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 97.72 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.7 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.69 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.67 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.65 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.63 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.62 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.61 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.58 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.53 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.52 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.52 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.51 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.5 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 97.49 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.48 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.48 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.47 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 97.46 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.45 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.43 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.42 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.42 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.39 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.37 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.36 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.33 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.32 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.31 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 97.31 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.3 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.29 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.25 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 97.23 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 97.22 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.22 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.21 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.2 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.2 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.18 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 97.16 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.15 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 97.15 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.15 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.14 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 97.13 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.13 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.11 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 97.1 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.1 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.1 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.08 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 97.08 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 97.07 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.07 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 97.07 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 97.05 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 97.05 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.05 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.04 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.04 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.04 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 97.04 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.03 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 97.03 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 97.03 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.01 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.0 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 97.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.99 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 96.99 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.99 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 96.97 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.95 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.95 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.94 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 96.93 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 96.92 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.9 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 96.89 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.89 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.88 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.88 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 96.88 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.87 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.84 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 96.84 | |
| 2yv2_A | 297 | Succinyl-COA synthetase alpha chain; COA-binding d | 96.83 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.83 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.83 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.82 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.81 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 96.79 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.79 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.79 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.79 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.78 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.78 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.77 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 96.76 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 96.75 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.74 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.74 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 96.71 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.7 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 96.69 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.68 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.68 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.64 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.63 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 96.63 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 96.61 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 96.61 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 96.61 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.61 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 96.6 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.59 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 96.58 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 96.57 | |
| 2dc1_A | 236 | L-aspartate dehydrogenase; NAD, oxidoreductase; HE | 96.57 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.55 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 96.55 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.55 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.53 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 96.52 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.5 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.49 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.48 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.48 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.47 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 96.43 | |
| 2fp4_A | 305 | Succinyl-COA ligase [GDP-forming] alpha-chain, mit | 96.43 | |
| 3o9z_A | 312 | Lipopolysaccaride biosynthesis protein WBPB; oxido | 96.42 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.41 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 96.41 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.41 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 96.38 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 96.38 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 96.38 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.37 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.37 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 96.35 | |
| 3aw8_A | 369 | PURK, phosphoribosylaminoimidazole carboxylase, AT | 96.34 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 96.33 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.31 |
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2e-20 Score=161.31 Aligned_cols=102 Identities=20% Similarity=0.320 Sum_probs=84.5
Q ss_pred CCccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+..+....+++|||||||||||++|+++|+++|++|++++|++.. .+++++.+|++|++.+.++++++|+|||+
T Consensus 11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (347)
T 4id9_A 11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHL 84 (347)
T ss_dssp ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence 344567778899999999999999999999999999999998765 45889999999999999999999999998
Q ss_pred C------------------hhH--HHHHHHhCCCCEEEEecccccccC
Q 028418 171 S------------------EGF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 171 a------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+ .++ ++++|++.+++||||+||.+||+.
T Consensus 85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~ 132 (347)
T 4id9_A 85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPE 132 (347)
T ss_dssp CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTT
T ss_pred CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCC
Confidence 2 112 789999999999999999999987
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-20 Score=159.05 Aligned_cols=104 Identities=12% Similarity=0.062 Sum_probs=89.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------ 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a------ 171 (209)
.+|+|||||||||||++|+++|+++|++|++++|++.+.......+++++.+|++|++++.++++++|+|||++
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~ 91 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSR 91 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-------
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCC
Confidence 34689999999999999999999999999999998876544333468999999999999999999999999982
Q ss_pred ------------hh--HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 ------------EG--FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 ------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+ .++++|++++++||||+||.++|+....
T Consensus 92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~ 135 (342)
T 2x4g_A 92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQ 135 (342)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCC
Confidence 01 2789999999999999999999986543
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.2e-20 Score=159.52 Aligned_cols=104 Identities=15% Similarity=0.178 Sum_probs=89.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc----C-------CceEEEEccCCCHHHHHHhhcCCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----G-------TYVESMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~----~-------~~vevv~GDl~D~~sL~~AL~GvDa 166 (209)
.+++|||||||||||++|+++|+++|++|++++|++....... . .+++++.+|++|++.+.++++++|+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 4679999999999999999999999999999999775432111 0 5799999999999999999999999
Q ss_pred EEEcC-h-------------------hH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 167 IICPS-E-------------------GF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 167 VIh~a-~-------------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
|||++ . ++ ++++|++.+++||||+||.++|+....
T Consensus 104 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~ 160 (351)
T 3ruf_A 104 VLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPA 160 (351)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCC
T ss_pred EEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCC
Confidence 99992 0 11 789999999999999999999987654
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-20 Score=155.40 Aligned_cols=98 Identities=15% Similarity=0.232 Sum_probs=87.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (209)
|+|||||||||||++|+++|+++ |++|++++|++++.......+++++.+|++|++++.++++++|+|||++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~ 80 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF 80 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence 57999999999999999999998 9999999999987766666789999999999999999999999999992
Q ss_pred ---hh--HHHHHHHhCCCCEEEEeccccccc
Q 028418 172 ---EG--FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 172 ---~g--~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.+ .++++|+++|++||||+||.+...
T Consensus 81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~ 111 (289)
T 3e48_A 81 KRIPEVENLVYAAKQSGVAHIIFIGYYADQH 111 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCST
T ss_pred hhHHHHHHHHHHHHHcCCCEEEEEcccCCCC
Confidence 12 289999999999999999976543
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-20 Score=151.52 Aligned_cols=101 Identities=10% Similarity=0.175 Sum_probs=88.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-------
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (209)
+++|||||||||||++|+++|+++|++|++++|++++.... ..+++++.+|++|++++.++++++|+|||++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP 82 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence 57999999999999999999999999999999998765433 3679999999999999999999999999992
Q ss_pred -------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 -------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.+++||||+||.+++....
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~ 120 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAP 120 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEET
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCC
Confidence 122 88999999999999999998776543
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.3e-20 Score=160.97 Aligned_cols=110 Identities=13% Similarity=0.152 Sum_probs=90.2
Q ss_pred CCccccCCCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhc-CCceEEEEccCC-CHHHHHHhhcCCcEE
Q 028418 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDAS-NKKFLKTALRGVRSI 167 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~-~~~vevv~GDl~-D~~sL~~AL~GvDaV 167 (209)
+.++..-.+++|||||||||||++|+++|+++ |++|++++|++.+..... ..+++++.+|++ |++.+.++++++|+|
T Consensus 16 ~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~V 95 (372)
T 3slg_A 16 TQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVI 95 (372)
T ss_dssp -------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred hcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEE
Confidence 44555666789999999999999999999998 999999999887665433 267999999999 999999999999999
Q ss_pred EEcC--------------------hh--HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 168 ICPS--------------------EG--FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 168 Ih~a--------------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
||++ .+ .++++|++.+ +||||+||.+||+....
T Consensus 96 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~ 150 (372)
T 3slg_A 96 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCAD 150 (372)
T ss_dssp EECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCC
T ss_pred EEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCC
Confidence 9982 01 2789999999 99999999999987543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.8e-20 Score=149.45 Aligned_cols=98 Identities=19% Similarity=0.213 Sum_probs=87.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC-HHHHHHhhcCCcEEEEcC-------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPS------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D-~~sL~~AL~GvDaVIh~a------- 171 (209)
|+||||||||+||++++++|+++|++|++++|++++.... .+++++.+|++| ++++.++++++|+|||++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL 78 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence 5899999999999999999999999999999998775443 579999999999 999999999999999982
Q ss_pred -----hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -----EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -----~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++.+++||||+||..++...
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~ 113 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE 113 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC
Confidence 122 8999999999999999998887654
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-20 Score=151.25 Aligned_cols=106 Identities=18% Similarity=0.219 Sum_probs=88.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--h
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--E 172 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a--~ 172 (209)
+..+++||||||||+||++|+++|+++| ++|++++|++++.......+++++++|++|++++.++++++|+|||++ .
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~ 99 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE 99 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCST
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Confidence 3346689999999999999999999999 999999999987766666789999999999999999999999999982 1
Q ss_pred ----h--HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 173 ----G--FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 173 ----g--~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
. .++++|++.+++||||+||.++|+..+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~ 134 (236)
T 3qvo_A 100 DLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPG 134 (236)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECCCCC------
T ss_pred chhHHHHHHHHHHHHcCCCEEEEEecceecCCCCc
Confidence 1 2889999999999999999999987644
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=143.01 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=89.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC---h----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---E---- 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---~---- 172 (209)
++||||||||+||++++++|+++|++|++++|++.+.......+++++.+|++|++++.++++++|+|||++ .
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 83 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSP 83 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCSC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCCc
Confidence 689999999999999999999999999999998876544335678999999999999999999999999982 1
Q ss_pred ------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 173 ------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 173 ------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ ++++|++.+++||||+||.++|+...
T Consensus 84 ~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~ 119 (206)
T 1hdo_A 84 TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPT 119 (206)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTT
T ss_pred cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcc
Confidence 12 78899999999999999999998764
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.2e-19 Score=152.42 Aligned_cols=101 Identities=14% Similarity=0.218 Sum_probs=87.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC----h
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS----E 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a----~ 172 (209)
|++|||||||||||++|+++|+++|++|++++|+.......+..+++++.+|++|++++.++++ ++|+|||++ .
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~ 80 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLV 80 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCc
Confidence 5789999999999999999999999999999997654433333478999999999999999999 999999982 0
Q ss_pred ----------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 173 ----------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 ----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ ++++|++.+++||||+||.++|+..
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~ 125 (330)
T 2c20_A 81 GVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEV 125 (330)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSC
T ss_pred cccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCC
Confidence 11 7889999999999999999999864
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=146.33 Aligned_cols=96 Identities=5% Similarity=0.088 Sum_probs=82.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
|+|||||||||||++|+++|+++|++|++++|++++..... .+++++.+|++|+++ +++.++|+|||++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence 58999999999999999999999999999999988765544 679999999999998 8999999999992
Q ss_pred ---hh--HHHHHHHhCCCCEEEEecccccccC
Q 028418 172 ---EG--FISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 ---~g--~ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+ .++++|++++++|||++||.+++..
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~ 109 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGAASLQI 109 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCCC----
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecceEEEc
Confidence 12 2899999999999999999876543
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-19 Score=152.10 Aligned_cols=99 Identities=25% Similarity=0.299 Sum_probs=86.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-h----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E---- 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~---- 172 (209)
++|||||||||||++|+++|+++ |++|++++|++.+.......+++++.+|++|++++.++++++|+|||++ .
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence 47999999999999999999999 9999999998876554434568999999999999999999999999982 1
Q ss_pred -----hH--HHHHHHhCCCCEEEEecccccccC
Q 028418 173 -----GF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 173 -----g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
++ ++++|+++|++||||+||.+++..
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~ 113 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYAFAEES 113 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC
Confidence 22 889999999999999999988743
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.6e-19 Score=151.25 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=84.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-------
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (209)
+++|||||||||||++|+++|+++|++|++++|++.... + .+++++.+|++ ++++.++++++|+|||++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~-~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~ 77 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--I-NDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQG 77 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--C-CceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCC
Confidence 468999999999999999999999999999999854433 2 27899999999 999999999999999982
Q ss_pred ---------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ---------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ---------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+ .++++|++.+++||||+||.++|+...
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~ 117 (311)
T 3m2p_A 78 KISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDET 117 (311)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGG
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCC
Confidence 01 289999999999999999999998654
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-19 Score=146.03 Aligned_cols=96 Identities=10% Similarity=0.116 Sum_probs=84.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-h------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E------ 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~------ 172 (209)
|+|||||||||||++|+++|+++|++|++++|++++.......+++++.+|++|+++ +++.++|+|||++ .
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence 579999999999999999999999999999999887766666789999999999998 8999999999982 1
Q ss_pred ------h--HHHHHHHhCCCCEEEEecccccccC
Q 028418 173 ------G--FISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 173 ------g--~ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+ .++++|+++| +||||+||.+++..
T Consensus 79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~ 111 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAM 111 (224)
T ss_dssp THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBC
T ss_pred hhHHHHHHHHHHHHHHHcC-CcEEEEecceeecc
Confidence 1 2889999999 99999999866543
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.3e-19 Score=151.22 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=87.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
|+|||||||||||++|+++|+++|++|++++|++.........+++++.+|++|++ +.+++++ |+|||++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~ 78 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLS 78 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhh
Confidence 58999999999999999999999999999999887665555677999999999999 9999999 9999982
Q ss_pred ------------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ------------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+ .++++|++.+++||||+||.++|+...
T Consensus 79 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~ 121 (312)
T 3ko8_A 79 TTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDAD 121 (312)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCS
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCC
Confidence 01 178999999999999999999998765
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.2e-19 Score=149.24 Aligned_cols=97 Identities=23% Similarity=0.293 Sum_probs=85.7
Q ss_pred eEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-------
Q 028418 101 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (209)
+|||||||||||++|+++|+++ |++|++++|++.+.......+++++.+|++|++++.++++++|+|||++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR 80 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHH
Confidence 5899999999999999999998 9999999998876544334568999999999999999999999999983
Q ss_pred -hhH--HHHHHHhCCCCEEEEeccccccc
Q 028418 172 -EGF--ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 172 -~g~--ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.++ ++++|+++|++||||+||.+++.
T Consensus 81 ~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~ 109 (286)
T 2zcu_A 81 APQHRNVINAAKAAGVKFIAYTSLLHADT 109 (286)
T ss_dssp -CHHHHHHHHHHHHTCCEEEEEEETTTTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCC
Confidence 122 89999999999999999998873
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=8.2e-19 Score=154.82 Aligned_cols=102 Identities=13% Similarity=-0.004 Sum_probs=88.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC---h--
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---E-- 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---~-- 172 (209)
.+++|||||||||||++|+++|+++|++|++++|++.+.......+++++.+|++|++++.++++++|+|||++ .
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~ 107 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM 107 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCcc
Confidence 46799999999999999999999999999999998766443333568999999999999999999999999982 0
Q ss_pred ----------------h--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 173 ----------------G--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 ----------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ .++++|++.+++||||+||.++|+..
T Consensus 108 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~ 152 (379)
T 2c5a_A 108 GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEF 152 (379)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGG
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCC
Confidence 1 17889999999999999999999854
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-19 Score=152.44 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=81.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh------hh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~------~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a 171 (209)
+++|||||||||||++|+++|+++||+|++++|++.... .. ...+++++++|++|++.+.++++++|+|||++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 578999999999999999999999999999999875421 11 12468899999999999999999999999982
Q ss_pred -------------------hhH--HHHHHHhCC-CCEEEEeccccc
Q 028418 172 -------------------EGF--ISNAGSLKG-VQHVILLSQRQR 195 (209)
Q Consensus 172 -------------------~g~--ll~AA~~aG-VkriV~vSS~~V 195 (209)
.++ ++++|++++ ++||||+||.++
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~ 134 (338)
T 2rh8_A 89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAA 134 (338)
T ss_dssp SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHH
T ss_pred CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHH
Confidence 012 788898886 999999999873
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=142.02 Aligned_cols=101 Identities=16% Similarity=0.122 Sum_probs=89.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHH-HCCCcEEEEEeCCc-chhhh--cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-h--
Q 028418 100 DAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKR-NAMES--FGTYVESMAGDASNKKFLKTALRGVRSIICPS-E-- 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll-~~G~~VraLvR~~~-~a~~~--~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~-- 172 (209)
++||||||||+||++++++|+ ++|++|++++|+++ +.... ...+++++.+|++|++++.++++++|+|||++ .
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n 85 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG 85 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence 349999999999999999999 89999999999987 66544 46779999999999999999999999999983 1
Q ss_pred ---hHHHHHHHhCCCCEEEEecccccccCCC
Q 028418 173 ---GFISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 173 ---g~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
-.+++++++.+++|||++||.++|+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~iv~iSs~~~~~~~~ 116 (221)
T 3r6d_A 86 SDMASIVKALSRXNIRRVIGVSMAGLSGEFP 116 (221)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTTTSCSC
T ss_pred hhHHHHHHHHHhcCCCeEEEEeeceecCCCC
Confidence 2388999999999999999999988654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=150.57 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=87.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch----hhh---c----CCceEEEEccCCCHHHHHHhhcCCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MES---F----GTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a----~~~---~----~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
..+++|||||||||||++|+++|+++|++|++++|++... ... + ..+++++.+|++|++++.++++++|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 4567999999999999999999999999999999976421 111 0 2568999999999999999999999
Q ss_pred EEEEcC----h----------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS----E----------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a----~----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|||++ . ++ ++++|++.+++||||+||.++|+...
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~ 161 (352)
T 1sb8_A 105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHP 161 (352)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCC
T ss_pred EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCC
Confidence 999982 0 11 78899999999999999999998764
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=149.42 Aligned_cols=102 Identities=15% Similarity=0.197 Sum_probs=88.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc--CCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh 169 (209)
+++|||||||||||++++++|+++|++|++++|+....... .+.+++++.+|++|++++.++++ ++|+|||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 84 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIH 84 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEE
Confidence 56899999999999999999999999999999987654321 24578999999999999999998 9999999
Q ss_pred cC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 170 PS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 170 ~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ .++ ++++|++.+++||||+||.++|+...
T Consensus 85 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~ 137 (341)
T 3enk_A 85 FAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPE 137 (341)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCS
T ss_pred CccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCC
Confidence 83 011 78899999999999999999997654
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-18 Score=150.60 Aligned_cols=105 Identities=14% Similarity=0.116 Sum_probs=83.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcch--hhh----cCCceEEEEccCCCHHHHHHhhcC--Cc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--MES----FGTYVESMAGDASNKKFLKTALRG--VR 165 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a--~~~----~~~~vevv~GDl~D~~sL~~AL~G--vD 165 (209)
...+++|||||||||||++|+++|+++| ++|+++.|..... ... ...+++++.+|++|++.+.+++++ +|
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 3556789999999999999999999999 5666666654211 111 124799999999999999999998 99
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|||++ .++ ++++|++.+++||||+||.+||+...
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~ 157 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLG 157 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCC
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCC
Confidence 999982 012 78999999999999999999999764
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-18 Score=150.35 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=87.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhcC--CcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~ 170 (209)
.+++|||||||||||++|+++|+++|++|++++|++.+.... ...+++++.+|++|++++.+++++ +|+|||+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 457999999999999999999999999999999987654321 135689999999999999999987 8999998
Q ss_pred C--------------------hhH--HHHHHHhCC-CCEEEEecccccccCCC
Q 028418 171 S--------------------EGF--ISNAGSLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
+ .++ ++++|++.+ ++||||+||..||+...
T Consensus 88 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~ 140 (357)
T 1rkx_A 88 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKE 140 (357)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCC
T ss_pred CCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCC
Confidence 2 011 788888876 99999999999998654
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.78 E-value=8.4e-19 Score=148.87 Aligned_cols=101 Identities=16% Similarity=0.229 Sum_probs=86.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchh--hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-h--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E-- 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~--~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~-- 172 (209)
+++||||||||+||++|+++|+++| ++|++++|++.+.. .....+++++.+|++|++++.++++++|+|||++ .
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~ 84 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE 84 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence 4789999999999999999999998 99999999987632 2223568999999999999999999999999983 0
Q ss_pred ---------h--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 173 ---------G--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 ---------g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ .++++|+++|++||||+|+.++++..
T Consensus 85 ~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~ 122 (299)
T 2wm3_A 85 SCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLT 122 (299)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHT
T ss_pred cccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccC
Confidence 1 27899999999999999988887643
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=153.17 Aligned_cols=103 Identities=9% Similarity=0.038 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhcCCcEEEEcC--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRGVRSIICPS-- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-- 171 (209)
..+++|||||||||||++|+++|+++| ++|++++|++......+ ..+++++.+|++|++.+.++++++|+|||++
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~ 109 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY 109 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence 456789999999999999999999999 99999999876532222 4579999999999999999999999999982
Q ss_pred --h----------------hH--HHHHHHhC-CCCEEEEecccccccCC
Q 028418 172 --E----------------GF--ISNAGSLK-GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 --~----------------g~--ll~AA~~a-GVkriV~vSS~~Vyg~~ 199 (209)
. ++ ++++|++. +++||||+||.++|+..
T Consensus 110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~ 158 (377)
T 2q1s_A 110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEK 158 (377)
T ss_dssp SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC------
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCC
Confidence 0 11 78899998 99999999999999754
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-18 Score=148.97 Aligned_cols=105 Identities=14% Similarity=0.258 Sum_probs=89.3
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhc--CCcEEE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR--GVRSII 168 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVI 168 (209)
.+...+|+|||||||||||++|+++|+++|++|++++|+..... ..+ .+++++.+|++|++++.++++ ++|+||
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-AGLSVIEGSVTDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-CCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence 45566789999999999999999999999999999999764432 112 468999999999999999999 999999
Q ss_pred EcC----h-------------h--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 169 CPS----E-------------G--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 169 h~a----~-------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|++ . + .++++|.+.+++||||+||.++|+..
T Consensus 94 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~ 143 (330)
T 2pzm_A 94 HSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRP 143 (330)
T ss_dssp ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSC
T ss_pred ECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCC
Confidence 982 1 1 17889999999999999999999865
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.4e-19 Score=148.33 Aligned_cols=98 Identities=15% Similarity=0.204 Sum_probs=87.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC-CcEEEEcC------
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-VRSIICPS------ 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G-vDaVIh~a------ 171 (209)
+++||||| +||||++|+++|+++|++|++++|++++. ..+++++.+|++|++.+.+++++ +|+|||++
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~ 77 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYS 77 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCC
Confidence 56899999 59999999999999999999999988763 35789999999999999999998 99999982
Q ss_pred ---------hhH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 ---------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 ---------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.++ ++++|++.+++||||+||.++|+....
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~ 118 (286)
T 3gpi_A 78 DEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVE 118 (286)
T ss_dssp -----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCC
Confidence 122 899999999999999999999987653
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-18 Score=148.09 Aligned_cols=107 Identities=14% Similarity=0.098 Sum_probs=85.7
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh----hh--cCCceEEEEccCCCHHHHHHhhcC--Cc
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ES--FGTYVESMAGDASNKKFLKTALRG--VR 165 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~----~~--~~~~vevv~GDl~D~~sL~~AL~G--vD 165 (209)
-...++++|||||||||||++|+++|+++|++|++++|++.+.. .. ...+++++.+|++|++++.+++++ +|
T Consensus 9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (335)
T 1rpn_A 9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQ 88 (335)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCC
Confidence 34678899999999999999999999999999999999876421 11 134689999999999999999996 59
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCC-CEEEEecccccccCCC
Q 028418 166 SIICPS--------------------EGF--ISNAGSLKGV-QHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a--------------------~g~--ll~AA~~aGV-kriV~vSS~~Vyg~~~ 200 (209)
+|||++ .++ ++++|++.++ +||||+||.++|+...
T Consensus 89 ~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~ 146 (335)
T 1rpn_A 89 EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQ 146 (335)
T ss_dssp EEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCS
T ss_pred EEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCC
Confidence 999982 011 7889998897 9999999999998754
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-18 Score=149.88 Aligned_cols=100 Identities=19% Similarity=0.291 Sum_probs=81.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hh--cC---CceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--FG---TYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~--~~---~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
.+++|||||||||||++|+++|+++|++|++++|++.... .. +. .+++++.+|++|++++.++++++|+|||
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 3578999999999999999999999999999999876321 11 11 2588999999999999999999999999
Q ss_pred cC-------------------hhH--HHHHHHhCC-CCEEEEecccc-ccc
Q 028418 170 PS-------------------EGF--ISNAGSLKG-VQHVILLSQRQ-RWH 197 (209)
Q Consensus 170 ~a-------------------~g~--ll~AA~~aG-VkriV~vSS~~-Vyg 197 (209)
++ .++ ++++|++++ ++||||+||.+ +|+
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~ 134 (337)
T 2c29_D 84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNI 134 (337)
T ss_dssp CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSC
T ss_pred eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhccc
Confidence 82 011 788888887 99999999987 444
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-18 Score=147.71 Aligned_cols=104 Identities=10% Similarity=0.156 Sum_probs=85.9
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC--CceEEEEccCCCHHHHHHhhcC--CcEEEE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRG--VRSIIC 169 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~--~~vevv~GDl~D~~sL~~AL~G--vDaVIh 169 (209)
+....+++|||||||||||++|+++|+++|++|++++|++......+. .+++++.+|++|++++.+++++ +|+|||
T Consensus 16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih 95 (333)
T 2q1w_A 16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVH 95 (333)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence 445567899999999999999999999999999999998654322221 4689999999999999999998 999999
Q ss_pred cC----h-------------hH--HHHHHHhCCCCEEEEeccccccc
Q 028418 170 PS----E-------------GF--ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a----~-------------g~--ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
++ . ++ ++++|.+.+++||||+||.++|+
T Consensus 96 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g 142 (333)
T 2q1w_A 96 TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYG 142 (333)
T ss_dssp CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGC
T ss_pred CceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhC
Confidence 82 1 11 78899999999999999999998
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.2e-18 Score=147.20 Aligned_cols=100 Identities=16% Similarity=0.185 Sum_probs=84.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeCCcc-----hhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRN-----AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~~~~-----a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a 171 (209)
+++|||||||||||++|+++|+++ |++|++++|++.. .......+++++.+|++|++++.++++++|+|||++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 578999999999999999999998 8999999997531 112223578999999999999999999999999992
Q ss_pred --------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 --------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 --------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|.+.++ ||||+||.++|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~ 132 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDL 132 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCB
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCC
Confidence 012 7889988898 99999999999865
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-18 Score=146.58 Aligned_cols=101 Identities=11% Similarity=0.064 Sum_probs=83.8
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC-
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS- 171 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a- 171 (209)
...++++|||||||||||++|+++|+++|++|++++|++.. .. + +++++.+|++|++++.+++++ +|+|||++
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-l--~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 83 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-P--NVEMISLDIMDSQRVKKVISDIKPDYIFHLAA 83 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-T--TEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-c--eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 35678899999999999999999999999999999998765 22 2 689999999999999999987 99999982
Q ss_pred -------------------hhH--HHHHHHhC-CCCEEEEecccccccCC
Q 028418 172 -------------------EGF--ISNAGSLK-GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -------------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++. +++||||+||..+|+..
T Consensus 84 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~ 133 (321)
T 2pk3_A 84 KSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMI 133 (321)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSC
T ss_pred ccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCC
Confidence 011 77888775 79999999999999864
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.9e-18 Score=145.99 Aligned_cols=98 Identities=14% Similarity=0.204 Sum_probs=87.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-------
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (209)
+++||||||||+||++++++|+++|++|++++|++.+.. ..+++++.+|++|++++.++++++|+|||++
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~ 79 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKP 79 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCC
Confidence 468999999999999999999999999999999887643 4578999999999999999999999999982
Q ss_pred ---------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 ---------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 ---------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++++|++.+++||||+||..+|+..
T Consensus 80 ~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~ 118 (267)
T 3rft_A 80 FEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYY 118 (267)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCC
Confidence 122 7889999999999999999999754
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.3e-18 Score=147.86 Aligned_cols=104 Identities=16% Similarity=0.195 Sum_probs=88.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHH--CCCcEEEEEeCCc-------------chhhhcCCceEEEEccCCCHHHHHHh-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIV--KRTRIKALVKDKR-------------NAMESFGTYVESMAGDASNKKFLKTA- 160 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~--~G~~VraLvR~~~-------------~a~~~~~~~vevv~GDl~D~~sL~~A- 160 (209)
..+++|||||||||||++|+++|++ +|++|++++|++. ......+.+++++.+|++|++.+.++
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE 87 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence 4567999999999999999999999 9999999999764 12223345689999999999999999
Q ss_pred hcCCcEEEEcC------------------hhH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 161 LRGVRSIICPS------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 161 L~GvDaVIh~a------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+.++|+|||++ .++ ++++|++.+++ |||+||.++|+....
T Consensus 88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~ 147 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA 147 (362)
T ss_dssp TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS
T ss_pred ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC
Confidence 89999999982 122 78999999998 999999999987654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.6e-19 Score=148.01 Aligned_cols=99 Identities=12% Similarity=0.061 Sum_probs=85.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a---- 171 (209)
++|||||||||||++|+++|+++ |++|++++|++.+.. . ..+++++.+|++|++++.++++ ++|+|||++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~ 80 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V-VNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLS 80 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H-HHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c-cCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccCC
Confidence 68999999999999999999999 899999999876532 1 1357899999999999999998 999999992
Q ss_pred ---------------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ---------------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ---------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+ .++++|++.+++||||+||.++|+...
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~ 126 (312)
T 2yy7_A 81 ATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTT 126 (312)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTS
T ss_pred CchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCC
Confidence 01 178899999999999999999998743
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-18 Score=143.07 Aligned_cols=102 Identities=13% Similarity=0.161 Sum_probs=85.7
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccCCCHHHHHHhhcCCcEEEEcC--
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPS-- 171 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl~D~~sL~~AL~GvDaVIh~a-- 171 (209)
.....++||||||||+||++++++|+++|++|++++|++++.......++ +++.+|++ +.+.+++.++|+|||++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCCC
Confidence 34567899999999999999999999999999999999887665544578 99999999 78899999999999992
Q ss_pred --------------hhH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 --------------EGF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 --------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.++ ++++|++.+++||||+||.+++..
T Consensus 95 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~ 137 (236)
T 3e8x_A 95 GPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP 137 (236)
T ss_dssp CTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG
T ss_pred CCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC
Confidence 112 789999999999999999776543
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.76 E-value=9.2e-19 Score=146.72 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=85.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
++|||||||||||++|+++|+++|++|++++|++.+.. ..+++++.+|++|++.+.++++++|+|||++
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~ 79 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVERPW 79 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCCCH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCCCH
Confidence 57999999999999999999999999999999876532 2468999999999999999999999999982
Q ss_pred --------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+ .++++|++.+++||||+||..+|+...
T Consensus 80 ~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~ 118 (267)
T 3ay3_A 80 NDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYP 118 (267)
T ss_dssp HHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCC
Confidence 01 278899999999999999999997643
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=5.6e-18 Score=144.99 Aligned_cols=101 Identities=15% Similarity=0.071 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-----hhhc-CCceEEEEccCCCHHHHHHhhcC--CcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-----~~~~-~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~ 170 (209)
|++|||||||||||++|+++|+++|++|++++|+.... .... ..+++++.+|++|++++.+++++ +|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 47899999999999999999999999999999854211 1111 23589999999999999999998 9999999
Q ss_pred C----h----------------hH--HHHHHHhCCCC-EEEEecccccccCC
Q 028418 171 S----E----------------GF--ISNAGSLKGVQ-HVILLSQRQRWHSS 199 (209)
Q Consensus 171 a----~----------------g~--ll~AA~~aGVk-riV~vSS~~Vyg~~ 199 (209)
+ . ++ ++++|++.+++ ||||+||.++|+..
T Consensus 81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~ 132 (347)
T 1orr_A 81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDL 132 (347)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTC
T ss_pred CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCC
Confidence 2 0 11 78899999996 99999999999864
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7e-18 Score=145.10 Aligned_cols=101 Identities=19% Similarity=0.202 Sum_probs=84.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc------h----hh---hcCCceEEEEccCCCHHHHHHhhc--C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------A----ME---SFGTYVESMAGDASNKKFLKTALR--G 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~------a----~~---~~~~~vevv~GDl~D~~sL~~AL~--G 163 (209)
+++|||||||||||++|+++|+++|++|++++|+... . .. ..+.+++++.+|++|++++.++++ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence 3689999999999999999999999999999986533 1 11 124568999999999999999998 8
Q ss_pred CcEEEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 164 VRSIICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|+|||++ .++ ++++|++.+++||||+||.++|+..
T Consensus 82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~ 139 (348)
T 1ek6_A 82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNP 139 (348)
T ss_dssp EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSC
T ss_pred CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCC
Confidence 99999982 011 7888999999999999999999853
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.75 E-value=2.2e-18 Score=146.87 Aligned_cols=102 Identities=14% Similarity=0.173 Sum_probs=85.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEE-EccCCCHHHHHHhhcCCcEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESM-AGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv-~GDl~D~~sL~~AL~GvDaVI 168 (209)
..+++|||||||||||++|+++|+++|++|++++|++.+.... .+.+++++ .+|++|++.+.++++++|+||
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 3467899999999999999999999999999999987654221 13568888 899999999999999999999
Q ss_pred EcC-----------------hhH--HHHHHH-hCCCCEEEEecccccccC
Q 028418 169 CPS-----------------EGF--ISNAGS-LKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 169 h~a-----------------~g~--ll~AA~-~aGVkriV~vSS~~Vyg~ 198 (209)
|++ .++ ++++|. ..+++||||+||.++|+.
T Consensus 89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~ 138 (342)
T 1y1p_A 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALI 138 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCC
T ss_pred EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcC
Confidence 982 112 788887 478999999999999854
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.75 E-value=6.6e-18 Score=144.43 Aligned_cols=100 Identities=13% Similarity=0.094 Sum_probs=84.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhc-CCceEEEEccCCCH-HHHHHhhcCCcEEEEcC---h-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASNK-KFLKTALRGVRSIICPS---E- 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~-~sL~~AL~GvDaVIh~a---~- 172 (209)
|+|||||||||||++|+++|+++ |++|++++|++.+..... ..+++++.+|++|+ +.+.++++++|+|||++ .
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~ 80 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence 58999999999999999999998 899999999887654332 34689999999984 67899999999999982 0
Q ss_pred ----------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 173 ----------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 173 ----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ ++++|++.+ +||||+||.++|+...
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~ 125 (345)
T 2bll_A 81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCS 125 (345)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCC
T ss_pred cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCC
Confidence 11 788998889 9999999999998654
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-18 Score=140.51 Aligned_cols=102 Identities=16% Similarity=0.175 Sum_probs=87.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC---h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---~ 172 (209)
.+++||||||||+||++++++|+++|+ +|++++|++.+.......+++++.+|++|++++.++++++|+|||++ .
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~ 96 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 96 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence 357899999999999999999999999 99999999876543333468999999999999999999999999982 0
Q ss_pred --------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 173 --------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 --------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ ++++|++.+++||||+||.++|+..
T Consensus 97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~ 139 (242)
T 2bka_A 97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS 139 (242)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC
T ss_pred ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCC
Confidence 11 6788999999999999999998754
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.1e-18 Score=145.95 Aligned_cols=100 Identities=17% Similarity=0.175 Sum_probs=82.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-------
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (209)
|++|||||||||||++|+++|+++| .|++++|............++++.+|++| +.+.++++++|+|||++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~ 78 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRI 78 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhh
Confidence 5689999999999999999999999 66666654443333445679999999999 99999999999999982
Q ss_pred -------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 -------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.+++||||+||.++|+...
T Consensus 79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~ 122 (313)
T 3ehe_A 79 GAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAK 122 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCS
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCC
Confidence 012 78899999999999999999998654
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.9e-18 Score=144.88 Aligned_cols=98 Identities=21% Similarity=0.252 Sum_probs=79.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe-CCcc---hhh--hcC---CceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRN---AME--SFG---TYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR-~~~~---a~~--~~~---~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
+++|||||||||||++|+++|+++|++|++++| ++.. ... .+. .+++++.+|++|++++.++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 368999999999999999999999999999998 6532 111 111 2478999999999999999999999999
Q ss_pred cC-------h------------hH--HHHHHHhC-CCCEEEEecccccc
Q 028418 170 PS-------E------------GF--ISNAGSLK-GVQHVILLSQRQRW 196 (209)
Q Consensus 170 ~a-------~------------g~--ll~AA~~a-GVkriV~vSS~~Vy 196 (209)
++ . ++ ++++|++. +++||||+||.+++
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~ 129 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAV 129 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGT
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHc
Confidence 82 0 11 67888887 89999999998754
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.8e-18 Score=144.11 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=83.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-------
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (209)
+++|||||| ||||++|+++|+++|++|++++|++.+.......+++++.+|++|.+ ++++|+|||++
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~~ 78 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGGD 78 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTBC
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECCCcccccc
Confidence 468999998 99999999999999999999999987765554567999999999954 89999999993
Q ss_pred --hhHHHHHHHh--CCCCEEEEecccccccCCCC
Q 028418 172 --EGFISNAGSL--KGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 --~g~ll~AA~~--aGVkriV~vSS~~Vyg~~~~ 201 (209)
...++++|++ .+++||||+||.++|+....
T Consensus 79 ~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~ 112 (286)
T 3ius_A 79 PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDG 112 (286)
T ss_dssp HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTT
T ss_pred HHHHHHHHHHHhhcCCceEEEEeecceecCCCCC
Confidence 1238899988 89999999999999987654
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=9e-18 Score=147.18 Aligned_cols=102 Identities=18% Similarity=0.217 Sum_probs=85.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHH-HCCCcEEEEEeCCcch---------hhh------c-----CCc---eEEEEccCCCH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNA---------MES------F-----GTY---VESMAGDASNK 154 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll-~~G~~VraLvR~~~~a---------~~~------~-----~~~---vevv~GDl~D~ 154 (209)
+|+|||||||||||++|+++|+ ++|++|++++|+.... ... + ..+ ++++.+|++|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4689999999999999999999 9999999999976542 111 0 124 89999999999
Q ss_pred HHHHHhhc--C-CcEEEEcC----h----------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 155 KFLKTALR--G-VRSIICPS----E----------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 155 ~sL~~AL~--G-vDaVIh~a----~----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+++.++++ + +|+|||++ . ++ ++++|++.+++||||+||.++|+...
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~ 152 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPT 152 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCC
Confidence 99999998 7 99999982 0 11 78899999999999999999998654
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-17 Score=143.33 Aligned_cols=100 Identities=23% Similarity=0.270 Sum_probs=84.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC---C---CcEEEEEeCCcc-----hhhh-cCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK---R---TRIKALVKDKRN-----AMES-FGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~---G---~~VraLvR~~~~-----a~~~-~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
|+|||||||||||++|+++|+++ | ++|++++|+... .... ...+++++.+|++|++++.+++.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 57999999999999999999997 8 999999996521 1111 1256899999999999999999999999
Q ss_pred EEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 168 ICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 168 Ih~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
||++ .++ ++++|.+.+++||||+||.++|+..
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~ 134 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSI 134 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCC
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCC
Confidence 9992 011 7889999999999999999999864
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.4e-18 Score=144.85 Aligned_cols=99 Identities=20% Similarity=0.200 Sum_probs=83.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a------ 171 (209)
|+|||||||||||++++++|+++|++|++++|...........+++++.+|++|++++.++++ ++|+|||++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 80 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVK 80 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCch
Confidence 579999999999999999999999999999985433222333568899999999999999998 899999982
Q ss_pred --------------hhH--HHHHHHhCCCCEEEEeccc-ccccC
Q 028418 172 --------------EGF--ISNAGSLKGVQHVILLSQR-QRWHS 198 (209)
Q Consensus 172 --------------~g~--ll~AA~~aGVkriV~vSS~-~Vyg~ 198 (209)
.++ ++++|++.+++||||+||. .+|+.
T Consensus 81 ~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~ 124 (311)
T 2p5y_A 81 VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGE 124 (311)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCC
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCC
Confidence 011 7889999999999999998 88875
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=7.1e-18 Score=143.87 Aligned_cols=102 Identities=11% Similarity=0.016 Sum_probs=85.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh----hhc--CCceEEEEccCCCHHHHHHhhcC--CcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF--GTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~----~~~--~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~ 170 (209)
+++|||||||||||++|+++|+++|++|++++|++.+.. ... ..+++++.+|++|++++.+++++ +|+|||+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 478999999999999999999999999999999876432 111 23689999999999999999986 5999998
Q ss_pred C--------------------hhH--HHHHHHhCCC-CEEEEecccccccCCC
Q 028418 171 S--------------------EGF--ISNAGSLKGV-QHVILLSQRQRWHSSS 200 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~aGV-kriV~vSS~~Vyg~~~ 200 (209)
+ .++ ++++|.+.++ +||||+||..+|+...
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~ 135 (345)
T 2z1m_A 83 AAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQ 135 (345)
T ss_dssp CCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCS
T ss_pred CCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC
Confidence 2 012 7888888898 8999999999998653
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.8e-18 Score=144.81 Aligned_cols=103 Identities=13% Similarity=0.113 Sum_probs=86.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC-------CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-CCcEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSII 168 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G-------~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-GvDaVI 168 (209)
..+++|||||||||||++|+++|+++| ++|++++|++.........+++++.+|++|++.+.++++ ++|+||
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi 91 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVIF 91 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEEE
Confidence 346789999999999999999999999 899999998754432234568999999999999999994 999999
Q ss_pred EcC-------------------hhH--HHHHHHhCC-----CCEEEEecccccccCC
Q 028418 169 CPS-------------------EGF--ISNAGSLKG-----VQHVILLSQRQRWHSS 199 (209)
Q Consensus 169 h~a-------------------~g~--ll~AA~~aG-----VkriV~vSS~~Vyg~~ 199 (209)
|++ .++ ++++|++.+ ++||||+||.++|+..
T Consensus 92 h~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~ 148 (342)
T 2hrz_A 92 HLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP 148 (342)
T ss_dssp ECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS
T ss_pred ECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC
Confidence 992 011 778888776 9999999999999865
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=6.8e-18 Score=143.40 Aligned_cols=94 Identities=21% Similarity=0.257 Sum_probs=82.6
Q ss_pred eEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC---h-
Q 028418 101 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---E- 172 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a---~- 172 (209)
+|||||||||||++|+++|+++ |++|++++|++.... +++++.+|++|++++.++++ ++|+|||++ .
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence 5899999999999999999998 899999998765432 47889999999999999998 999999982 0
Q ss_pred ---------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 173 ---------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 ---------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ ++++|++.+++||||+||.++|+..
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~ 119 (317)
T 3ajr_A 76 KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPE 119 (317)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTT
T ss_pred ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCC
Confidence 11 7889999999999999999999864
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.5e-17 Score=135.73 Aligned_cols=100 Identities=21% Similarity=0.350 Sum_probs=86.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (209)
.+++||||||||+||++++++|+++ |++|++++|++.+.... ..+++++.+|++|++++.++++++|+|||++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~ 81 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVP 81 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence 4678999999999999999999999 89999999987665433 4568899999999999999999999999982
Q ss_pred h-----------------------------hH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 E-----------------------------GF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 ~-----------------------------g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
. ++ ++++|++.+++||||+||.+++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~ 139 (253)
T 1xq6_A 82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP 139 (253)
T ss_dssp EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT
T ss_pred cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC
Confidence 0 11 788899999999999999987644
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-18 Score=147.23 Aligned_cols=103 Identities=20% Similarity=0.226 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-----------------------hhcCCceEEEEccCCC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----------------------ESFGTYVESMAGDASN 153 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-----------------------~~~~~~vevv~GDl~D 153 (209)
..+++|||||||||||++|+++|+++|++|++++|...... .....+++++.+|++|
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 45789999999999999999999999999999998643210 0124568999999999
Q ss_pred HHHHHHhhcC--CcEEEEcC-----------h------------hH--HHHHHHhCCC-CEEEEecccccccCC
Q 028418 154 KKFLKTALRG--VRSIICPS-----------E------------GF--ISNAGSLKGV-QHVILLSQRQRWHSS 199 (209)
Q Consensus 154 ~~sL~~AL~G--vDaVIh~a-----------~------------g~--ll~AA~~aGV-kriV~vSS~~Vyg~~ 199 (209)
++++.+++++ +|+|||++ . ++ ++++|++.++ +||||+||.++|+..
T Consensus 89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~ 162 (404)
T 1i24_A 89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTP 162 (404)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCC
T ss_pred HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCC
Confidence 9999999998 99999982 0 11 6888988898 599999999999865
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-17 Score=145.23 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=84.0
Q ss_pred cccCCC-CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hhhh-------cCCceEEEEccCCCHHHHHHh
Q 028418 94 FPEEAR-DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTA 160 (209)
Q Consensus 94 ~~~~~~-~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~~~-------~~~~vevv~GDl~D~~sL~~A 160 (209)
..+.+| ++|||||||||||++|+++|+++|++|++++|++.. .... ...+++++.+|++|++++.++
T Consensus 18 ~~~~~M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 97 (375)
T 1t2a_A 18 YFQGHMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKI 97 (375)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHH
T ss_pred hhHhhcCcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHH
Confidence 345555 689999999999999999999999999999998653 1111 134689999999999999999
Q ss_pred hcC--CcEEEEcC----h----------------hH--HHHHHHhCCC---CEEEEecccccccCCC
Q 028418 161 LRG--VRSIICPS----E----------------GF--ISNAGSLKGV---QHVILLSQRQRWHSSS 200 (209)
Q Consensus 161 L~G--vDaVIh~a----~----------------g~--ll~AA~~aGV---kriV~vSS~~Vyg~~~ 200 (209)
+++ +|+|||++ . ++ ++++|.+.++ +||||+||.++|+...
T Consensus 98 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~ 164 (375)
T 1t2a_A 98 INEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ 164 (375)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCS
T ss_pred HHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCC
Confidence 987 59999982 0 11 7889999998 8999999999998643
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=5.8e-18 Score=146.12 Aligned_cols=99 Identities=13% Similarity=0.150 Sum_probs=86.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-----CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC---CcEEEEcC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICPS 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G-----~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G---vDaVIh~a 171 (209)
++|||||||||||++|+++|+++| ++|++++|++.... ....+++++.+|++|++++.+++++ +|+|||++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a 80 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT 80 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence 689999999999999999999999 99999999876543 2235689999999999999999999 99999992
Q ss_pred ---------------hhH--HHHHHHhC--CCCEEE-------EecccccccCC
Q 028418 172 ---------------EGF--ISNAGSLK--GVQHVI-------LLSQRQRWHSS 199 (209)
Q Consensus 172 ---------------~g~--ll~AA~~a--GVkriV-------~vSS~~Vyg~~ 199 (209)
.++ ++++|++. +++||| |+||.++|+..
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~ 134 (364)
T 2v6g_A 81 WANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKI 134 (364)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTS
T ss_pred CCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhcccc
Confidence 122 78999888 899998 89999999874
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=141.47 Aligned_cols=95 Identities=19% Similarity=0.173 Sum_probs=80.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch------h---hhcCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------M---ESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a------~---~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
+++||||||||+||++|+++|+++|++|++++|++... . .....+++++.+|++|++++.++++|+|+|||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 57899999999999999999999999999999986422 1 11245799999999999999999999999999
Q ss_pred cC-----hh--HHHHHHHhCC-CCEEEEecccc
Q 028418 170 PS-----EG--FISNAGSLKG-VQHVILLSQRQ 194 (209)
Q Consensus 170 ~a-----~g--~ll~AA~~aG-VkriV~vSS~~ 194 (209)
++ .+ .++++|+++| |+|||+ |+.+
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g 115 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVGTVKRFFP-SEFG 115 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCSEEEC-SCCS
T ss_pred CCcchhhhhHHHHHHHHHhcCCCceEee-cccc
Confidence 83 22 3899999999 999995 5543
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.3e-17 Score=141.66 Aligned_cols=100 Identities=20% Similarity=0.210 Sum_probs=82.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch----hh---hcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----ME---SFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a----~~---~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
|+|||||||||||++|+++|+++|++|+++.|..... .. ..+..++++.+|++|++++.++++ ++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 5799999999999999999999999999998754221 11 113468899999999999999997 59999998
Q ss_pred C----h----------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 171 S----E----------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a----~----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ . ++ ++++|++.+++||||+||.++|+..
T Consensus 81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~ 131 (338)
T 1udb_A 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDN 131 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSC
T ss_pred CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCC
Confidence 2 0 11 6788888999999999999999754
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.6e-17 Score=140.01 Aligned_cols=101 Identities=17% Similarity=0.174 Sum_probs=83.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCc--chhhh--c--CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--NAMES--F--GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~--~a~~~--~--~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|+|||||||||||++|+++|+++| ++|++++|++. ..... + ..+++++.+|++|++++.+++.++|+|||+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL 82 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence 4689999999999999999999986 99999998652 11111 1 346899999999999999999999999999
Q ss_pred C--------------------hhH--HHHHHHhCCC-CEEEEecccccccCC
Q 028418 171 S--------------------EGF--ISNAGSLKGV-QHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~aGV-kriV~vSS~~Vyg~~ 199 (209)
+ .++ ++++|.+.++ +||||+||.++|+..
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~ 134 (336)
T 2hun_A 83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDI 134 (336)
T ss_dssp CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCC
Confidence 2 011 7888887775 799999999999864
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-17 Score=141.23 Aligned_cols=95 Identities=16% Similarity=0.132 Sum_probs=80.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hh---hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~---~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|||||||||||++|+++|+++|++|++++|++.. .. .....+++++.+|++|++++.++++|+|+|||+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 5789999999999999999999999999999998642 11 112457999999999999999999999999998
Q ss_pred C---------hh--HHHHHHHhCC-CCEEEEecccc
Q 028418 171 S---------EG--FISNAGSLKG-VQHVILLSQRQ 194 (209)
Q Consensus 171 a---------~g--~ll~AA~~aG-VkriV~vSS~~ 194 (209)
+ .+ .++++|+++| |+|||+ |+.+
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g 118 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-SEFG 118 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-SCCS
T ss_pred CccccchhhHHHHHHHHHHHHhcCCCceEEe-cCCc
Confidence 2 12 2899999999 999996 5433
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.6e-17 Score=145.40 Aligned_cols=101 Identities=12% Similarity=0.121 Sum_probs=83.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hhhhc------CC-ceEEEEccCCCHHHHHHhhcC--Cc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF------GT-YVESMAGDASNKKFLKTALRG--VR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~~~~------~~-~vevv~GDl~D~~sL~~AL~G--vD 165 (209)
++|||||||||||++|+++|+++|++|++++|++.+ ..... +. +++++.+|++|++++.+++++ +|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 589999999999999999999999999999998754 11111 12 689999999999999999987 59
Q ss_pred EEEEcC----h----------------hH--HHHHHHhCCCC-----EEEEecccccccCCC
Q 028418 166 SIICPS----E----------------GF--ISNAGSLKGVQ-----HVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a----~----------------g~--ll~AA~~aGVk-----riV~vSS~~Vyg~~~ 200 (209)
+|||++ . ++ ++++|.+.+++ ||||+||.++|+...
T Consensus 109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~ 170 (381)
T 1n7h_A 109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP 170 (381)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCC
Confidence 999982 0 11 78888888887 999999999998643
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=5.1e-17 Score=140.36 Aligned_cols=100 Identities=12% Similarity=0.122 Sum_probs=83.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCc--chhhh--c--CCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR--NAMES--F--GTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~--~a~~~--~--~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
|+|||||||||||++|+++|+++ |++|++++|++. ..... + ..+++++.+|++|++++.++++ ++|+|||+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 47999999999999999999998 799999999752 11111 1 3468999999999999999998 99999999
Q ss_pred C--------------------hhH--HHHHHHhC--CCC-------EEEEecccccccCC
Q 028418 171 S--------------------EGF--ISNAGSLK--GVQ-------HVILLSQRQRWHSS 199 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~a--GVk-------riV~vSS~~Vyg~~ 199 (209)
+ .++ ++++|.+. +++ ||||+||.++|+..
T Consensus 81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~ 140 (361)
T 1kew_A 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDL 140 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCC
Confidence 2 012 78889888 998 99999999999865
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.8e-17 Score=140.64 Aligned_cols=93 Identities=13% Similarity=0.131 Sum_probs=79.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-chhh---hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-~a~~---~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (209)
++||||||||+||++|+++|+++|++|++++|++. +... ....+++++.+|++|++++.++++|+|+|||++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~ 91 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ 91 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh
Confidence 47999999999999999999999999999999885 3221 123569999999999999999999999999983
Q ss_pred -hh--HHHHHHHhCC-CCEEEEeccc
Q 028418 172 -EG--FISNAGSLKG-VQHVILLSQR 193 (209)
Q Consensus 172 -~g--~ll~AA~~aG-VkriV~vSS~ 193 (209)
.+ .++++|+++| |+|||+ |+.
T Consensus 92 ~~~~~~l~~aa~~~g~v~~~v~-S~~ 116 (318)
T 2r6j_A 92 ILDQFKILEAIKVAGNIKRFLP-SDF 116 (318)
T ss_dssp STTHHHHHHHHHHHCCCCEEEC-SCC
T ss_pred hHHHHHHHHHHHhcCCCCEEEe-ecc
Confidence 12 3899999998 999996 543
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.9e-17 Score=140.02 Aligned_cols=94 Identities=22% Similarity=0.276 Sum_probs=79.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-------cchhh---hcCCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------RNAME---SFGTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-------~~a~~---~~~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
+++||||||||+||++|+++|+++|++|++++|++ +++.. ....+++++.+|++|++++.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 57899999999999999999999999999999987 22211 113568999999999999999999999999
Q ss_pred EcC-----hh--HHHHHHHhCC-CCEEEEeccc
Q 028418 169 CPS-----EG--FISNAGSLKG-VQHVILLSQR 193 (209)
Q Consensus 169 h~a-----~g--~ll~AA~~aG-VkriV~vSS~ 193 (209)
|++ .+ .++++|+++| |+|||+ |+.
T Consensus 82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~ 113 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFP-SEF 113 (307)
T ss_dssp ECSSSSCGGGHHHHHHHHHHHCCCSEEEC-SCC
T ss_pred ECCcccccccHHHHHHHHHhcCCceEEee-ccc
Confidence 982 22 3899999998 999994 443
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.4e-17 Score=143.64 Aligned_cols=96 Identities=18% Similarity=0.210 Sum_probs=83.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch--hhhc-CCceEEEEcc-CCCHHHHHHhhcCCcEEEEcC--h
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MESF-GTYVESMAGD-ASNKKFLKTALRGVRSIICPS--E 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a--~~~~-~~~vevv~GD-l~D~~sL~~AL~GvDaVIh~a--~ 172 (209)
+++|||||||||||++|+++|+++|++|++++|++++. .... ..+++++.+| ++|++++.++++++|+|||++ .
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~ 84 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ 84 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence 56899999999999999999999999999999988754 2222 2368999999 999999999999999999882 1
Q ss_pred --------hHHHHHHHhCC-CCEEEEecccc
Q 028418 173 --------GFISNAGSLKG-VQHVILLSQRQ 194 (209)
Q Consensus 173 --------g~ll~AA~~aG-VkriV~vSS~~ 194 (209)
-.++++|+++| ++||||+||..
T Consensus 85 ~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 85 AGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 12889999999 99999999985
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.7e-17 Score=142.57 Aligned_cols=101 Identities=22% Similarity=0.288 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHC-CC-cEEEEEeCCcchhhh----cCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVK-RT-RIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~-G~-~VraLvR~~~~a~~~----~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..+++||||||||+||++|+++|+++ |+ +|++++|++.+.... ...+++++.+|++|++.+.++++++|+|||+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~ 98 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA 98 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence 34679999999999999999999999 97 999999987654221 1357899999999999999999999999998
Q ss_pred C--------------------hh--HHHHHHHhCCCCEEEEeccccccc
Q 028418 171 S--------------------EG--FISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 171 a--------------------~g--~ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+ .+ .++++|.+.+++||||+||..++.
T Consensus 99 Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~ 147 (344)
T 2gn4_A 99 AALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN 147 (344)
T ss_dssp CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS
T ss_pred CCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC
Confidence 2 01 178999999999999999987654
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.1e-17 Score=139.45 Aligned_cols=92 Identities=13% Similarity=0.174 Sum_probs=77.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-c-----chhh---hcCCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-R-----NAME---SFGTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~-----~a~~---~~~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
.+++||||||||+||++|+++|+++|++|++++|++ . +... ....+++++.+|++|++++.++++|+|+||
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 367899999999999999999999999999999987 2 1111 123569999999999999999999999999
Q ss_pred EcC-----hh--HHHHHHHhCC-CCEEEE
Q 028418 169 CPS-----EG--FISNAGSLKG-VQHVIL 189 (209)
Q Consensus 169 h~a-----~g--~ll~AA~~aG-VkriV~ 189 (209)
|++ .+ .++++|+++| |+|||+
T Consensus 83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (321)
T 3c1o_A 83 SALPFPMISSQIHIINAIKAAGNIKRFLP 111 (321)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCCEEEC
T ss_pred ECCCccchhhHHHHHHHHHHhCCccEEec
Confidence 983 22 3899999999 999994
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.9e-17 Score=140.49 Aligned_cols=102 Identities=15% Similarity=0.112 Sum_probs=81.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-----hhh------cCCceEEEEccCCCHHHHHHhhcC--Cc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MES------FGTYVESMAGDASNKKFLKTALRG--VR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-----~~~------~~~~vevv~GDl~D~~sL~~AL~G--vD 165 (209)
+++|||||||||||++++++|+++|++|++++|++... ... .+.+++++.+|++|++++.+++++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 47899999999999999999999999999999986531 111 124688999999999999999986 69
Q ss_pred EEEEcC--------------------hhH--HHHHHHhCCC---CEEEEecccccccCCC
Q 028418 166 SIICPS--------------------EGF--ISNAGSLKGV---QHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a--------------------~g~--ll~AA~~aGV---kriV~vSS~~Vyg~~~ 200 (209)
+|||++ .++ ++++|++.++ +||||+||.++|+...
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~ 140 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQ 140 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCC
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCC
Confidence 999982 012 7889999999 8999999999998653
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.5e-17 Score=141.44 Aligned_cols=94 Identities=14% Similarity=0.135 Sum_probs=79.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc----hh---hhcCCceEEEEccCCCHHHHHHhhc--CCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AM---ESFGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~----a~---~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh 169 (209)
+++|||||||||||++|+++|+++|++|++++|++.. .. .....+++++.+|++|++++.++++ ++|+|||
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 4689999999999999999999999999999998722 11 1223579999999999999999999 9999999
Q ss_pred cC-----hh--HHHHHHHhCC-CCEEEEeccc
Q 028418 170 PS-----EG--FISNAGSLKG-VQHVILLSQR 193 (209)
Q Consensus 170 ~a-----~g--~ll~AA~~aG-VkriV~vSS~ 193 (209)
++ .+ .++++|+++| ++|||+ |+.
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~-S~~ 120 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAVGTIKRFLP-SEF 120 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHHCCCSEEEC-SCC
T ss_pred CCchhhHHHHHHHHHHHHHcCCceEEee-ccc
Confidence 93 22 3899999999 999997 543
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-17 Score=139.31 Aligned_cols=88 Identities=20% Similarity=0.231 Sum_probs=77.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a------ 171 (209)
|+|||||||||||++|+++|+ +|++|++++|++. ++.+|++|++.+.+++++ +|+|||++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~ 68 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cccccCCCHHHHHHHHHhcCCCEEEECcccCCHh
Confidence 589999999999999999999 8999999999762 357899999999999997 99999982
Q ss_pred --------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.++ ||||+||.++|+...
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~ 112 (299)
T 1n2s_A 69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTG 112 (299)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCT
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCC
Confidence 011 7889999998 899999999998764
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.69 E-value=4.1e-17 Score=137.39 Aligned_cols=90 Identities=13% Similarity=0.160 Sum_probs=76.7
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC-
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS- 171 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a- 171 (209)
...+-++|||||||||||++|+++|+++|++|++++|+ .+|++|++++.++++ ++|+|||++
T Consensus 8 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~~~d~vih~A~ 72 (292)
T 1vl0_A 8 HHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKFFNEKKPNVVINCAA 72 (292)
T ss_dssp ----CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred cccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------cCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 35567799999999999999999999999999999986 379999999999999 899999982
Q ss_pred --h-----------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --E-----------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --~-----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
. ++ ++++|+++++ ||||+||.++|+...
T Consensus 73 ~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~ 121 (292)
T 1vl0_A 73 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEA 121 (292)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCC
T ss_pred cCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCC
Confidence 0 11 7889988898 999999999998754
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.4e-17 Score=136.86 Aligned_cols=92 Identities=12% Similarity=0.104 Sum_probs=76.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC---h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS---E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a---~ 172 (209)
.+++|||||||||||++|+++|+++|+ +.... ...++++.+|++|++.+.+++++ +|+|||++ .
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~ 73 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG------LPGED-----WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVG 73 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-----EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-----ccccCceecccCCHHHHHHHHhhcCCCEEEECceecc
Confidence 468999999999999999999999998 22111 12356678999999999999997 99999992 0
Q ss_pred ------------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 173 ------------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 173 ------------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ ++++|++.+++||||+||.++|+...
T Consensus 74 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~ 121 (319)
T 4b8w_A 74 GLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKT 121 (319)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSC
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCC
Confidence 11 78999999999999999999998754
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.8e-17 Score=139.03 Aligned_cols=91 Identities=11% Similarity=0.096 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC-----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS----- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a----- 171 (209)
+++|||||||||||++|+++|+++|++|++++|++.. .+ ++.+|++|++++.+++++ +|+|||++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~ 73 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP 73 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence 3689999999999999999999999999999987654 12 788999999999999986 89999982
Q ss_pred ---------------hhH--HHHHHHhCCCCEEEEecccccccC
Q 028418 172 ---------------EGF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 172 ---------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.++ ++++|.+.++ ||||+||..+|+.
T Consensus 74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~ 116 (315)
T 2ydy_A 74 DVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG 116 (315)
T ss_dssp --------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC
Confidence 011 7889988887 9999999999986
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.1e-17 Score=131.74 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=83.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC---h-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---E- 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---~- 172 (209)
+++||||||||+||++++++|+++|+ +|++++|++.+ ...+++++.+|++|++++.+++ +|+|||++ .
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~~ 78 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTIK 78 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCHH
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh--hcEEEECeeeccc
Confidence 46899999999999999999999998 99999998876 2356899999999999999998 99999982 1
Q ss_pred --------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 173 --------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 173 --------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ ++++|++.+++||||+||.++|+...
T Consensus 79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~ 122 (215)
T 2a35_A 79 EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS 122 (215)
T ss_dssp HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS
T ss_pred cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCc
Confidence 11 78899999999999999999987543
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=135.96 Aligned_cols=87 Identities=9% Similarity=0.097 Sum_probs=76.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC---h-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---E- 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a---~- 172 (209)
+++|||||||||||++|+++|+++|++|++++|+. .+|++|++++.++++ ++|+|||++ .
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 68 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG 68 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------cCCccCHHHHHHHHHhcCCCEEEEcCeecCC
Confidence 36899999999999999999999999999988753 379999999999999 999999982 1
Q ss_pred -----------------h--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 173 -----------------G--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 173 -----------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ .++++|++.+++||||+||.++|+..
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~ 114 (321)
T 1e6u_A 69 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKL 114 (321)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTT
T ss_pred cchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCC
Confidence 1 17889999999999999999999864
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=145.51 Aligned_cols=104 Identities=18% Similarity=0.247 Sum_probs=87.8
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHC---CCcEEEEEeCCcchh---------------------hhcCCceEEEEccC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVK---RTRIKALVKDKRNAM---------------------ESFGTYVESMAGDA 151 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~---G~~VraLvR~~~~a~---------------------~~~~~~vevv~GDl 151 (209)
...+++|||||||||||++|+++|+++ |++|++++|++.... .....+++++.+|+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 345789999999999999999999999 999999999876431 01235799999999
Q ss_pred C------CHHHHHHhhcCCcEEEEcC----------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 152 S------NKKFLKTALRGVRSIICPS----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 152 ~------D~~sL~~AL~GvDaVIh~a----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ |.+.+.++++++|+|||++ .++ ++++|++.+++||||+||.++|+..
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~ 221 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAI 221 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTS
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCcc
Confidence 8 7778999999999999982 122 8899999999999999999998764
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=5.5e-17 Score=136.32 Aligned_cols=86 Identities=17% Similarity=0.220 Sum_probs=75.3
Q ss_pred CC-eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC----
Q 028418 99 RD-AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---- 171 (209)
Q Consensus 99 ~~-~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a---- 171 (209)
|+ +|||||||||||++|+++|+++|++|++++| +.+|++|++.+.++++ ++|+|||++
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r---------------~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~ 68 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDK---------------KLLDITNISQVQQVVQEIRPHIIIHCAAYTK 68 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECT---------------TTSCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEecc---------------cccCCCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 44 8999999999999999999999999999998 2389999999999998 799999982
Q ss_pred ----------------hh--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ----------------EG--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ----------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+ .++++|++.++ ||||+||..+|+...
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~ 114 (287)
T 3sc6_A 69 VDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDR 114 (287)
T ss_dssp HHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCC
T ss_pred hHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCC
Confidence 01 17899999998 799999999998754
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-16 Score=135.08 Aligned_cols=89 Identities=15% Similarity=0.150 Sum_probs=69.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-------- 171 (209)
|+|||||||||||++|+++|+++||+|++++|++.+.. +..| +...++++++|+|||++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~---------~~~~----~~~~~~l~~~d~vihla~~~i~~~~ 67 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR---------ITWD----ELAASGLPSCDAAVNLAGENILNPL 67 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE---------EEHH----HHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe---------eecc----hhhHhhccCCCEEEEeccCcccchh
Confidence 68999999999999999999999999999999876431 1222 34467889999999982
Q ss_pred ----------------hhH--HHHHHHhCCCC--EEEEecccccccCCCC
Q 028418 172 ----------------EGF--ISNAGSLKGVQ--HVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 ----------------~g~--ll~AA~~aGVk--riV~vSS~~Vyg~~~~ 201 (209)
.++ +++++++.+++ ++|+.||.++|+....
T Consensus 68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~ 117 (298)
T 4b4o_A 68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLT 117 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSS
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCC
Confidence 011 67777776655 4888999999987654
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=6.4e-17 Score=136.37 Aligned_cols=97 Identities=18% Similarity=0.208 Sum_probs=80.4
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchh-hhcCCceEEEEccCCCHHHHHHhhcC-----CcEEEEcC--
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRG-----VRSIICPS-- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~-~~~~~~vevv~GDl~D~~sL~~AL~G-----vDaVIh~a-- 171 (209)
+|||||||||||++|+++|+++| ++|++++|++.... ... .+++ +.+|++|++.+.+++++ +|+|||++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 78 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL-VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 78 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH-HTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc-Ccce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence 58999999999999999999999 99999999876431 111 1234 78999999999999986 99999982
Q ss_pred ----------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.++ ||||+||.++|+...
T Consensus 79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~ 124 (310)
T 1eq2_A 79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRT 124 (310)
T ss_dssp CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCC
T ss_pred ccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCC
Confidence 012 7889999999 999999999998654
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-16 Score=137.79 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=80.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchh-hhcCCceEEEEccCCCHHHHHHhhc-----CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-----GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~-~~~~~~vevv~GDl~D~~sL~~AL~-----GvDaVIh 169 (209)
..+++|||||||||||++|+++|+++| ++|++++|++.... ..+ ..++ +.+|++|++.+.++++ ++|+|||
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih 121 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL-VDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFH 121 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT-TTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc-cCce-EeeecCcHHHHHHHHhhcccCCCCEEEE
Confidence 345789999999999999999999999 99999999875431 112 2344 7899999999999998 5999999
Q ss_pred cC------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 170 PS------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 170 ~a------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ .++ ++++|++.++ ||||+||.++|+...
T Consensus 122 ~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~ 171 (357)
T 2x6t_A 122 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRT 171 (357)
T ss_dssp CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCS
T ss_pred CCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCC
Confidence 82 012 7889999999 999999999998654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.6e-16 Score=148.08 Aligned_cols=102 Identities=17% Similarity=0.150 Sum_probs=85.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc--CCcEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR--GVRSII 168 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVI 168 (209)
.+++|||||||||||++|+++|+++|++|++++|++.... .....+++++.+|++|++++.++++ ++|+||
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vi 89 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 89 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEE
Confidence 4678999999999999999999999999999999764321 1124568999999999999999998 899999
Q ss_pred EcC----h----------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 169 CPS----E----------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 169 h~a----~----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|++ . ++ ++++|++.+++||||+||.++|+..
T Consensus 90 h~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~ 142 (699)
T 1z45_A 90 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDA 142 (699)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCG
T ss_pred ECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCC
Confidence 982 0 11 7888999999999999999999753
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-16 Score=135.01 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=74.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc----hhhh----cCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMES----FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~----a~~~----~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
.+++|||||||||||++|+++|+++|++|++++|++.. .... ...+++++.+|++ ++|+|||
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~ 75 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVYH 75 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence 46799999999999999999999999999999997762 1111 1134666777765 8999999
Q ss_pred cC---h----------------h--HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 170 PS---E----------------G--FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 170 ~a---~----------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
++ . + .++++|++++++||||+||.++|+....
T Consensus 76 ~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~ 128 (321)
T 3vps_A 76 LASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADT 128 (321)
T ss_dssp CCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSS
T ss_pred CCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCC
Confidence 82 0 1 1889999999999999999999987643
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=8.4e-16 Score=132.73 Aligned_cols=98 Identities=15% Similarity=0.181 Sum_probs=78.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh----hhc-CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESF-GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~----~~~-~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...+++|||||||||||++|+++|+++|++|++++|++.... ... ..+++++.+|+.|+ ++.++|+|||+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~ 98 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYHL 98 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEEC
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEEC
Confidence 445789999999999999999999999999999999754221 111 24689999999886 47899999998
Q ss_pred C----h----------------hH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 171 S----E----------------GF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a----~----------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ . ++ ++++|++.++ ||||+||.++|+..
T Consensus 99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~ 148 (343)
T 2b69_A 99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDP 148 (343)
T ss_dssp CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSC
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCC
Confidence 2 0 11 7888988887 99999999999764
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-16 Score=141.72 Aligned_cols=100 Identities=16% Similarity=0.201 Sum_probs=80.9
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh------------------hhcCCceEEEEccCCCHH
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKK 155 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~------------------~~~~~~vevv~GDl~D~~ 155 (209)
+...++++|||||||||||++|+++|+++|++|++++|++.... .....+++++.+|++|++
T Consensus 64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~ 143 (427)
T 4f6c_A 64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD 143 (427)
T ss_dssp SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence 34556779999999999999999999999999999999987221 112357999999999999
Q ss_pred HHHHhhcCCcEEEEcC-----------------hhH--HHHHHHhCCCCEEEEeccccc
Q 028418 156 FLKTALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 156 sL~~AL~GvDaVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~V 195 (209)
.+. ++.++|+|||++ .++ ++++|.+ ++++|||+||.++
T Consensus 144 ~l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~ 200 (427)
T 4f6c_A 144 DVV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV 200 (427)
T ss_dssp CCC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG
T ss_pred cCC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh
Confidence 888 889999999982 122 7888888 8999999999998
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.65 E-value=7e-16 Score=146.60 Aligned_cols=102 Identities=15% Similarity=0.100 Sum_probs=86.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHH-HHHhhcCCcEEEEcC---
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASNKKF-LKTALRGVRSIICPS--- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~s-L~~AL~GvDaVIh~a--- 171 (209)
.+++|||||||||||++|+++|+++ |++|++++|++.+..... ..+++++.+|++|+++ +.++++++|+|||++
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~ 393 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 393 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceec
Confidence 4678999999999999999999998 899999999886654332 3568999999999865 888999999999982
Q ss_pred -----------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 -----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.+ +||||+||.++|+...
T Consensus 394 ~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~ 440 (660)
T 1z7e_A 394 TPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCS 440 (660)
T ss_dssp CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCC
T ss_pred CccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCC
Confidence 012 788999999 9999999999997653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.64 E-value=9.2e-16 Score=127.34 Aligned_cols=91 Identities=14% Similarity=0.120 Sum_probs=77.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC----h-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS----E- 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a----~- 172 (209)
|+|||||||||||++++++|+ +|++|++++|++... .+ +.+|++|++++.+++++ +|+|||++ .
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 71 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVD 71 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccChh
Confidence 479999999999999999999 589999999987532 22 88999999999999987 99999982 0
Q ss_pred ---------------hH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 173 ---------------GF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 173 ---------------g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ ++++|++.++ ||||+||..+|+...
T Consensus 72 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~ 115 (273)
T 2ggs_A 72 KCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEK 115 (273)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSS
T ss_pred hhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCC
Confidence 11 7888988887 999999999997653
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-16 Score=144.73 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch------------------hhhcCCceEEEEccCCCHHHHH
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFLK 158 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a------------------~~~~~~~vevv~GDl~D~~sL~ 158 (209)
.++++|||||||||||++|+++|+++|++|++++|++.+. ......+++++.+|++|++.+.
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 3467899999999999999999999999999999988732 1123467999999999988888
Q ss_pred HhhcCCcEEEEcC-----------------hhH--HHHHHHhCCCCEEEEeccccc
Q 028418 159 TALRGVRSIICPS-----------------EGF--ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 159 ~AL~GvDaVIh~a-----------------~g~--ll~AA~~aGVkriV~vSS~~V 195 (209)
++.++|+|||++ .++ ++++|++ +++||||+||.++
T Consensus 228 -~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v 281 (508)
T 4f6l_B 228 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV 281 (508)
T ss_dssp -CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT
T ss_pred -CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh
Confidence 889999999982 122 7888888 8899999999999
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.59 E-value=3e-15 Score=138.65 Aligned_cols=89 Identities=15% Similarity=0.115 Sum_probs=75.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-h-----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E----- 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~----- 172 (209)
+|+|||||||||||++|+++|+++|++|++++|++.+.. .+.+|+.|. +.+++.++|+|||++ .
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~~ 216 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------KRFWDPLNP--ASDLLDGADVLVHLAGEPIFGR 216 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------CEECCTTSC--CTTTTTTCSEEEECCCC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------ceeecccch--hHHhcCCCCEEEECCCCccccc
Confidence 679999999999999999999999999999999887632 267788754 578899999999982 0
Q ss_pred ---------------hH--HHHH-HHhCCCCEEEEeccccccc
Q 028418 173 ---------------GF--ISNA-GSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 173 ---------------g~--ll~A-A~~aGVkriV~vSS~~Vyg 197 (209)
++ ++++ |++.+++||||+||.++|+
T Consensus 217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg 259 (516)
T 3oh8_A 217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYG 259 (516)
T ss_dssp CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEec
Confidence 11 6777 6788999999999999998
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.57 E-value=3.7e-15 Score=130.47 Aligned_cols=81 Identities=14% Similarity=0.136 Sum_probs=70.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS------- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a------- 171 (209)
|+|||||||||||++|+++|+++|+ +|++++|+ +|++.+.++++++|+|||++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~~~~ 61 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNRPEH 61 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCCCCC
Confidence 5899999999999999999999998 66655543 89999999999999999982
Q ss_pred ---------hh--HHHHHHHhCCCC-EEEEecccccccCC
Q 028418 172 ---------EG--FISNAGSLKGVQ-HVILLSQRQRWHSS 199 (209)
Q Consensus 172 ---------~g--~ll~AA~~aGVk-riV~vSS~~Vyg~~ 199 (209)
.+ .++++|++++++ ||||+||..+|+..
T Consensus 62 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~~ 101 (369)
T 3st7_A 62 DKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQDN 101 (369)
T ss_dssp STTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCCC
Confidence 12 289999999998 99999999998743
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.6e-15 Score=121.70 Aligned_cols=94 Identities=10% Similarity=0.153 Sum_probs=76.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc----CCcEEEEcC---
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPS--- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~----GvDaVIh~a--- 171 (209)
|++||||||||+||++++++|+++|++|++++|++++... .+.+|++|++++.++++ ++|+|||++
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG 73 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence 4689999999999999999999999999999998765431 16789999999999987 899999982
Q ss_pred h--------------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 172 E--------------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 ~--------------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
. ++ +++++ ++.+.+|||++||..+++..
T Consensus 74 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 121 (255)
T 2dkn_A 74 VTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121 (255)
T ss_dssp TTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTT
T ss_pred CcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccc
Confidence 1 11 44444 44578999999999998754
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.9e-14 Score=120.60 Aligned_cols=103 Identities=13% Similarity=0.133 Sum_probs=84.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
.++++|||||+|+||++++++|+++|++|++++|+.++... ..+..++++.+|++|++++.++++ ++|.|
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 45789999999999999999999999999999998876543 234678999999999999998886 78999
Q ss_pred EEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 168 ICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 168 Ih~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
||++ .++ +++.+++.+..+||++||...+....
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 146 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFA 146 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCC
Confidence 9982 011 34556778899999999988765543
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-14 Score=119.52 Aligned_cols=100 Identities=12% Similarity=0.148 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...++||||||+|+||++++++|+++|++|+++.|++++.... .+..++++.+|++|++++.++++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 3467899999999999999999999999999999987654321 24568899999999999999986
Q ss_pred CCcEEEEcC----h--------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 163 GVRSIICPS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 163 GvDaVIh~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
++|+|||++ . ++ +++.+++.+.+|||++||...+
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 148 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGF 148 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhc
Confidence 899999982 0 11 2334456788999999997654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.6e-14 Score=118.04 Aligned_cols=104 Identities=11% Similarity=0.132 Sum_probs=83.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...++||||||+|+||++++++|+++|++|++++|++++.... .+..+.++.+|++|++++.++++ +
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4467999999999999999999999999999999987654321 24568899999999999999886 8
Q ss_pred CcEEEEcC----h-------------------hH--HHHHH----HhCCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS----E-------------------GF--ISNAG----SLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a----~-------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|+|||++ . ++ +++++ ++.+.++||++||..++....
T Consensus 89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 154 (255)
T 1fmc_A 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI 154 (255)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC
Confidence 99999982 0 11 33443 466889999999998876543
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.3e-14 Score=117.70 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=81.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
+++||||||+|+||++++++|+++|++|.++.|++++..... -.+++++.+|++|++++.++++ ++|+|||
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN 84 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999999999999999999999999999999876543221 1258899999999999988875 7899999
Q ss_pred cC----h--------------------h------HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 170 PS----E--------------------G------FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 170 ~a----~--------------------g------~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ . + .+++++++.+.++||++||..++....
T Consensus 85 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 145 (234)
T 2ehd_A 85 NAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFK 145 (234)
T ss_dssp CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCT
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCC
Confidence 82 0 1 134556778899999999988775543
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=5.2e-14 Score=118.26 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=82.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c----CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F----GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~----~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+|+||++++++|+++|++|+++.|++++.... + +..+.++.+|++|++++.++++ +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999999987654321 1 4568899999999999998886 8
Q ss_pred CcEEEEcC-------------h-----------hH--H----HHHHHhCCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|.|||++ + ++ + +..+++.+..+||++||..++...+
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 152 (263)
T 3ai3_A 86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW 152 (263)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC
Confidence 99999982 0 11 2 3334566889999999998876543
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.53 E-value=6e-14 Score=117.91 Aligned_cols=103 Identities=16% Similarity=0.235 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c-----CCceEEEEccCCCHHHHHHhhc------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~-----~~~vevv~GDl~D~~sL~~AL~------G 163 (209)
.++++|||||+|+||++++++|+++|++|+++.|++++.... . +..++++.+|++|++++.++++ |
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 457899999999999999999999999999999987654321 1 2268899999999999999987 7
Q ss_pred CcEEEEcC----h--------------------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|.|||++ . ++ +++.+++.+..+||++||..++....
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 152 (260)
T 2z1n_A 86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ 152 (260)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC
Confidence 99999982 0 11 34445677889999999988876543
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=6e-14 Score=115.39 Aligned_cols=104 Identities=15% Similarity=0.139 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhc---CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~a 171 (209)
...++||||||+|+||++++++|+++|++|+++.|++++..... ..+++++.+|++|++++.++++ .+|+|||++
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence 34679999999999999999999999999999999876543221 1357888999999999999987 479999982
Q ss_pred -------------h-----------hH--HHHHH----HhCC-CCEEEEecccccccCCC
Q 028418 172 -------------E-----------GF--ISNAG----SLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -------------~-----------g~--ll~AA----~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
+ ++ +++++ ++.+ .+|||++||..++...+
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 144 (244)
T 1cyd_A 85 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP 144 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT
T ss_pred cccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC
Confidence 0 11 23443 3346 78999999998876554
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.7e-14 Score=117.08 Aligned_cols=103 Identities=13% Similarity=0.207 Sum_probs=82.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
..++||||||+|+||++++++|+++|++|+++.|+++..... .. ..++++.+|++|++++.++++ .+|
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 467899999999999999999999999999999987644321 11 468999999999999998886 489
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCC-CEEEEecccccccCCC
Q 028418 166 SIICPS-------------E-----------GF------ISNAGSLKGV-QHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a-------------~-----------g~------ll~AA~~aGV-kriV~vSS~~Vyg~~~ 200 (209)
.|||++ + ++ +++.+++.+. ++||++||..++...+
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 150 (251)
T 1zk4_A 85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP 150 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC
Confidence 999982 0 11 3455667788 8999999988765543
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.52 E-value=7.3e-14 Score=115.25 Aligned_cols=101 Identities=15% Similarity=0.233 Sum_probs=80.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||+|+||++++++|+++|++|++++|++++... ..+..++++.+|++|++++.++++ ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999998755431 113458999999999999999886 89
Q ss_pred cEEEEcC------h---------------------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 165 RSIICPS------E---------------------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 165 DaVIh~a------~---------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|.|||++ . ++ +++.+++.+.++||++||..++...
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 149 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF 149 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC
Confidence 9999982 0 00 2334456688999999998776544
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1e-13 Score=114.64 Aligned_cols=103 Identities=15% Similarity=0.190 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCce-EEEEccCCCHHHHHHhh------cCCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYV-ESMAGDASNKKFLKTAL------RGVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~v-evv~GDl~D~~sL~~AL------~GvDa 166 (209)
..++++|||||+|+||++++++|+++|++|++++|++++... ..+..+ +++.+|++|++++.+++ .++|.
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 345789999999999999999999999999999998765432 123346 88999999999999887 47899
Q ss_pred EEEcC----h--------------------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 167 IICPS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 167 VIh~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|||++ . ++ +++.+++.+.++||++||..++...
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 151 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN 151 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC
Confidence 99982 0 11 2344556789999999998876544
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1e-13 Score=117.24 Aligned_cols=103 Identities=12% Similarity=0.158 Sum_probs=82.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
..+++|||||+|+||++++++|+++|++|+++.|++++... .....++++.+|++|++++.++++ ++|+|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45789999999999999999999999999999998765432 223347899999999999999987 89999
Q ss_pred EEcC----h--------------------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 168 ICPS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 168 Ih~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
||++ . ++ +++.+++.+..+||++||...+...+
T Consensus 86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 148 (260)
T 1nff_A 86 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV 148 (260)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC
Confidence 9982 0 11 34455667889999999988765443
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-13 Score=117.06 Aligned_cols=102 Identities=18% Similarity=0.163 Sum_probs=82.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhc-----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
...++++|||||+|+||++++++|+++|++|.+++|++.+.... ....+.++.+|++|++++.++++
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 34567899999999999999999999999999999987654321 12357889999999999988886
Q ss_pred --CCcEEEEcC------------------------hh----H--HHHHHHhCCC--CEEEEeccccccc
Q 028418 163 --GVRSIICPS------------------------EG----F--ISNAGSLKGV--QHVILLSQRQRWH 197 (209)
Q Consensus 163 --GvDaVIh~a------------------------~g----~--ll~AA~~aGV--kriV~vSS~~Vyg 197 (209)
++|+|||++ .+ + +++++++.++ .+||++||..++.
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~ 177 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR 177 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcc
Confidence 899999982 01 1 4566777787 8999999988774
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.50 E-value=5.4e-14 Score=103.09 Aligned_cols=97 Identities=21% Similarity=0.167 Sum_probs=83.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC----h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS----E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a----~ 172 (209)
.+++|+|+|+ |++|+++++.|+.+| ++|+++.|++++.......+++++.+|+.|++.+.++++++|.||++. .
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 4578999999 999999999999999 999999999877665545678899999999999999999999999983 2
Q ss_pred hHHHHHHHhCCCCEEEEeccccc
Q 028418 173 GFISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 173 g~ll~AA~~aGVkriV~vSS~~V 195 (209)
..++++|.+.|+++|.+.++...
T Consensus 83 ~~~~~~~~~~g~~~~~~~~~~~~ 105 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYFDLTEDVAA 105 (118)
T ss_dssp HHHHHHHHHTTCEEECCCSCHHH
T ss_pred HHHHHHHHHhCCCEEEecCcHHH
Confidence 23889999999998887665543
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.7e-13 Score=115.07 Aligned_cols=99 Identities=12% Similarity=0.155 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
...+++|||||+|+||++++++|+++|++|+++.|++++ +..+.++.+|++|++++.++++ ++|.|||
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 456799999999999999999999999999999998765 3457899999999999998886 7999999
Q ss_pred cC----h--------------------hH--H----HHHHHhCCCCEEEEecccccccCCC
Q 028418 170 PS----E--------------------GF--I----SNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 170 ~a----~--------------------g~--l----l~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ . ++ + +..+++.+..+||++||..++....
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 141 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK 141 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC
Confidence 82 0 11 2 3334456889999999988775543
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.5e-13 Score=117.21 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=84.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
..++++|||||+|+||++++++|+++|++|+++.|+.++........+.++.+|++|++++.++++ ++|.|||
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 345789999999999999999999999999999999877665555578999999999999998886 7899999
Q ss_pred cC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 170 PS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 170 ~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ + ++ ++..+++.+..+||++||...+....
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~ 154 (266)
T 3p19_A 94 NAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFP 154 (266)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCC
Confidence 82 0 11 33445667889999999988775544
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.8e-13 Score=114.72 Aligned_cols=103 Identities=17% Similarity=0.126 Sum_probs=82.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch--hh--hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--ME--SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a--~~--~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
.++++|||||+|+||++++++|+++|++|+++.|+++.. .. ..+..+.++.+|++|++++.++++ ++|.
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 357899999999999999999999999999999987521 11 124468889999999999999987 8999
Q ss_pred EEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|||++ + ++ ++..+++.+..+||++||...+...+
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 146 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGST 146 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCC
Confidence 99982 0 11 34456778899999999988765543
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.49 E-value=2e-13 Score=113.30 Aligned_cols=102 Identities=19% Similarity=0.197 Sum_probs=80.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.+++||||||+|+||++++++|+++|++|+++.|++++... ..+..++++.+|++|++++.++++ ++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999999999999999999999999999998764321 124568999999999999998886 78
Q ss_pred cEEEEcC---h----------------------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 165 RSIICPS---E----------------------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 165 DaVIh~a---~----------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
|+|||++ . ++ +++++ ++.+..+||++||...+...
T Consensus 92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 157 (260)
T 3awd_A 92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN 157 (260)
T ss_dssp CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC
Confidence 9999982 0 01 23333 34578999999998766443
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-13 Score=113.59 Aligned_cols=100 Identities=11% Similarity=0.098 Sum_probs=74.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.+++||||||+|+||++++++|+++|++|+++ .|++..... ..+..++++.+|++|++++.++++ +
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 45789999999999999999999999999999 566554321 124568999999999999998886 8
Q ss_pred CcEEEEcC----h--------------------hH--HH----HHHHhCCCCEEEEecccc-ccc
Q 028418 164 VRSIICPS----E--------------------GF--IS----NAGSLKGVQHVILLSQRQ-RWH 197 (209)
Q Consensus 164 vDaVIh~a----~--------------------g~--ll----~AA~~aGVkriV~vSS~~-Vyg 197 (209)
+|+|||++ . ++ ++ +.+++.+..|||++||.. .++
T Consensus 84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~ 148 (247)
T 2hq1_A 84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIG 148 (247)
T ss_dssp CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC------
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC
Confidence 99999982 0 11 22 334456889999999974 444
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.8e-13 Score=113.39 Aligned_cols=103 Identities=16% Similarity=0.151 Sum_probs=81.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh---hcCCceEEEEccCCCHHHHHHhh-------cCCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME---SFGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~---~~~~~vevv~GDl~D~~sL~~AL-------~GvDa 166 (209)
.++++|||||+|+||++++++|+++|++|+++.|++ ++... ..+..+.++.+|++|++++.+++ .++|.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 85 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 457899999999999999999999999999999988 54322 23456889999999999998886 37999
Q ss_pred EEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|||++ + ++ ++..+++.+..+||++||...+...+
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 149 (249)
T 2ew8_A 86 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE 149 (249)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC
Confidence 99982 0 11 23335667889999999988776543
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=2e-13 Score=115.71 Aligned_cols=102 Identities=16% Similarity=0.238 Sum_probs=80.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++||||||+|+||++++++|+++|++|++++|+++..... .+..++++.+|++|++++.++++ +
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 3457999999999999999999999999999999987654321 24568999999999999988876 7
Q ss_pred CcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 164 VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+|+|||++ . ++ +++.+++.+..+||++||..++..
T Consensus 109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 173 (272)
T 1yb1_A 109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS 173 (272)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC
T ss_pred CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC
Confidence 89999982 0 11 234445678999999999877654
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.6e-13 Score=113.98 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=81.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhh--------cC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------RG 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL--------~G 163 (209)
.++++|||||+|+||++++++|+++|++|+++.|++++.... .+..++++.+|++|++++.+++ .+
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 87 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 87 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467899999999999999999999999999999987654321 2446889999999999999888 46
Q ss_pred CcEEEEcC-------------h-----------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|.|||++ + ++ +++++ ++.+..+||++||...+...
T Consensus 88 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 153 (260)
T 2ae2_A 88 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV 153 (260)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC
Confidence 99999982 0 11 33333 56788999999998776543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=115.32 Aligned_cols=104 Identities=8% Similarity=0.157 Sum_probs=81.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcC--CceEEEEccCCCHHHHHHhhc-------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFG--TYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~--~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++||||||+|+||++++++|+++|++|+++.|+...... .+. ..++++.+|++|++++.++++ ++
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 93 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 93 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 356789999999999999999999999999999998754321 122 268999999999999999886 79
Q ss_pred cEEEEcC---------------h-----------hH--HHHHH----HhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS---------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a---------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|+|||++ + ++ +++++ ++.+..+||++||..++....
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 161 (278)
T 2bgk_A 94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE 161 (278)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT
T ss_pred CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC
Confidence 9999982 0 01 33333 345789999999998886654
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=115.07 Aligned_cols=103 Identities=19% Similarity=0.186 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhh--------c
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL--------~ 162 (209)
...++||||||+|+||++++++|+++|++|+++.|++++.... .+..++++.+|++|++++.+++ .
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3457899999999999999999999999999999987654321 2346889999999999999887 5
Q ss_pred CCcEEEEcC----h--------------------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS----E--------------------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a----~--------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
++|+|||++ . ++ +++++ ++.+.+|||++||..++...
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 158 (266)
T 1xq1_A 92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA 158 (266)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC
Confidence 789999982 0 11 34444 56789999999998776543
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-13 Score=113.44 Aligned_cols=102 Identities=11% Similarity=0.183 Sum_probs=80.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc---
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--- 162 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~--- 162 (209)
+++||||||+|+||++++++|+++|+ +|.++.|++++.... .+..++++.+|++|++++.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999 899999987654321 14568899999999999998886
Q ss_pred ----CCcEEEEcC----h--------------------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 163 ----GVRSIICPS----E--------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 ----GvDaVIh~a----~--------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++|.|||++ . ++ ++++ +++.+..|||++||..++....
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 153 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR 153 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCC
Confidence 799999982 0 11 2333 3456889999999988876543
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.4e-13 Score=114.02 Aligned_cols=104 Identities=14% Similarity=0.185 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++ +
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3467999999999999999999999999999999987654321 24468899999999999988876 8
Q ss_pred CcEEEEcC---h----------------------hH--HHH----HHHhCCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS---E----------------------GF--ISN----AGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a---~----------------------g~--ll~----AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|.|||++ . ++ +++ .+++.+..+||++||..++...+
T Consensus 92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 159 (260)
T 2zat_A 92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP 159 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC
Confidence 99999982 0 01 223 34567889999999998876544
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.1e-13 Score=114.66 Aligned_cols=102 Identities=12% Similarity=0.127 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
..+++|||||+|+||++++++|+++|++|+++.|++++... .++..+.++.+|++|++++.++++ ++|.|
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45789999999999999999999999999999998765432 223458899999999999998887 89999
Q ss_pred EEcC----h--------------------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 168 ICPS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 168 Ih~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
||++ . ++ +++.+++.+..+||++||...+...
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 145 (254)
T 1hdc_A 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL 145 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC
Confidence 9982 0 11 3455667788999999998876543
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.2e-13 Score=112.27 Aligned_cols=104 Identities=17% Similarity=0.170 Sum_probs=80.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhc---CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~a 171 (209)
...++||||||+|+||++++++|+++|++|++++|++++..... ..+++++.+|++|++++.++++ ++|+|||++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence 34678999999999999999999999999999999876543221 1357888999999999999986 589999982
Q ss_pred ----h--------------------hH--HHHHH----HhCC-CCEEEEecccccccCCC
Q 028418 172 ----E--------------------GF--ISNAG----SLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ----~--------------------g~--ll~AA----~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
. ++ +++++ ++.+ ..+||++||..++...+
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 144 (244)
T 3d3w_A 85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT 144 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT
T ss_pred ccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC
Confidence 0 11 23333 3346 78999999988776543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.48 E-value=9.8e-14 Score=111.30 Aligned_cols=89 Identities=16% Similarity=0.144 Sum_probs=72.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC---CcEEEEcC----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICPS---- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G---vDaVIh~a---- 171 (209)
+|+||||||+|+||++++++|+ +|++|+++.|++. .+.+|++|++++.++++. +|+|||++
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~ 70 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT 70 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4589999999999999999999 9999999999764 478999999999999876 89999982
Q ss_pred ---------h-----------hH--HHHHHHhC---CCCEEEEecccccccCCC
Q 028418 172 ---------E-----------GF--ISNAGSLK---GVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ---------~-----------g~--ll~AA~~a---GVkriV~vSS~~Vyg~~~ 200 (209)
+ ++ +++++... + .+||++||..++...+
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~ 123 (202)
T 3d7l_A 71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIV 123 (202)
T ss_dssp CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCT
T ss_pred CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCC
Confidence 0 11 45555544 4 7999999987765443
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2.7e-13 Score=112.74 Aligned_cols=103 Identities=12% Similarity=0.132 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe-CCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR-~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++||||||+|+||++++++|+++|++|+++.| ++++.... .+..+.++.+|++|++++.++++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 34679999999999999999999999999999999 55433211 24468899999999999998886
Q ss_pred CCcEEEEcC-------------h-----------hH------HHHHHHhCC-CCEEEEecccccccCC
Q 028418 163 GVRSIICPS-------------E-----------GF------ISNAGSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a-------------~-----------g~------ll~AA~~aG-VkriV~vSS~~Vyg~~ 199 (209)
++|+|||++ . ++ +++.+++.+ ..|||++||...+...
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 152 (261)
T 1gee_A 85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW 152 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC
Confidence 899999982 0 11 233344556 7899999998776443
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.48 E-value=9.5e-14 Score=114.00 Aligned_cols=98 Identities=10% Similarity=0.152 Sum_probs=76.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhhh------cCCceEE-EEccCCCHHHHHHhhc-------C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVES-MAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~~------~~~~vev-v~GDl~D~~sL~~AL~-------G 163 (209)
+++||||||+|+||++++++|+++|++|+++ .|++++.... .+..+.. +.+|++|++++.++++ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999999998 6776543321 1345666 8999999999988864 8
Q ss_pred CcEEEEcC----h--------------------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+|+|||++ . ++ +++++++.+++|||++||...+
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~ 143 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGI 143 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhc
Confidence 99999982 0 11 3445567789999999997654
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.4e-13 Score=114.81 Aligned_cols=99 Identities=19% Similarity=0.229 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe-CCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR-~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...++||||||+|+||++++++|+++|++|++++| ++++... ..+..++++.+|++|++++.++++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 45679999999999999999999999999999999 5443321 124568899999999999999887
Q ss_pred CCcEEEEcC----h--------------------hH--HHHHHHh---CCCCEEEEecccccc
Q 028418 163 GVRSIICPS----E--------------------GF--ISNAGSL---KGVQHVILLSQRQRW 196 (209)
Q Consensus 163 GvDaVIh~a----~--------------------g~--ll~AA~~---aGVkriV~vSS~~Vy 196 (209)
++|.|||++ . ++ +++++.. .+ .+||++||..++
T Consensus 99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~ 160 (274)
T 1ja9_A 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAV 160 (274)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGT
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhc
Confidence 899999982 0 11 3444433 25 799999998877
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-13 Score=117.25 Aligned_cols=105 Identities=19% Similarity=0.296 Sum_probs=86.5
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc---CCcEE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR---GVRSI 167 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~---GvDaV 167 (209)
+....++++|||||+|+||++++++|+++|++|++++|+.++... ..+..++++.+|++|++++.++++ ++|.|
T Consensus 11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVL 90 (291)
T ss_dssp CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 345567899999999999999999999999999999999876543 234578999999999999999987 66999
Q ss_pred EEcC-----------h-----------hH--HHHHHHhCCCCEEEEecccccccC
Q 028418 168 ICPS-----------E-----------GF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 168 Ih~a-----------~-----------g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
||++ + ++ +++++.....+|||++||...+..
T Consensus 91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~ 145 (291)
T 3rd5_A 91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPG 145 (291)
T ss_dssp EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTC
T ss_pred EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccC
Confidence 9982 0 11 677777777789999999887654
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=3.5e-13 Score=114.89 Aligned_cols=105 Identities=12% Similarity=0.174 Sum_probs=81.6
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-----
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
|....++++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++
T Consensus 17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (277)
T 2rhc_B 17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER 96 (277)
T ss_dssp TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4345667999999999999999999999999999999987654321 14568899999999999988876
Q ss_pred --CCcEEEEcC----h--------------------hH--HHHHHH------hCCCCEEEEecccccccC
Q 028418 163 --GVRSIICPS----E--------------------GF--ISNAGS------LKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 --GvDaVIh~a----~--------------------g~--ll~AA~------~aGVkriV~vSS~~Vyg~ 198 (209)
++|+|||++ . ++ +++++. +.+..+||++||...+..
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 166 (277)
T 2rhc_B 97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG 166 (277)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC
Confidence 799999982 0 11 344433 347799999999876543
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=3.9e-13 Score=113.36 Aligned_cols=103 Identities=13% Similarity=0.145 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------c--CCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--GTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~--~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
..++++|||||+|+||++++++|+++|++|+++.|++++.... . +..+.++.+|++|++++.++++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4567999999999999999999999999999999987654321 1 4568899999999999998886
Q ss_pred -CCcEEEEcC----h-h--------------------H------HHHHHHhCCCCEEEEecccccccCC
Q 028418 163 -GVRSIICPS----E-G--------------------F------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 -GvDaVIh~a----~-g--------------------~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++|.|||++ . + + +++.+++.+..+||++||...+...
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 159 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI 159 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC
Confidence 789999982 1 0 0 3445566788999999998776543
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.47 E-value=4e-13 Score=112.85 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=80.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
..++++|||||+|+||++++++|+++|++|++++|++++.... ....+.++.+|++|++++.++++ ++|+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3467999999999999999999999999999999987654322 22357899999999999999887 8999
Q ss_pred EEEcC-------------h-----------hH--HHHH----HHhCC-CCEEEEecccccccCC
Q 028418 167 IICPS-------------E-----------GF--ISNA----GSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll~A----A~~aG-VkriV~vSS~~Vyg~~ 199 (209)
|||++ + ++ ++++ .++.+ ..+||++||...+...
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 153 (263)
T 3ak4_A 90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA 153 (263)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC
Confidence 99982 0 11 2333 34456 7899999998776543
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.47 E-value=4e-13 Score=113.94 Aligned_cols=100 Identities=17% Similarity=0.315 Sum_probs=82.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
...++++|||||+|+||++++++|+++|++|+++.|+.++... ..++++.+|++|++++.++++ ++|+||
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 101 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD---PDIHTVAGDISKPETADRIVREGIERFGRIDSLV 101 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS---TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 4556799999999999999999999999999999998876432 358999999999999998887 899999
Q ss_pred EcC------------------------hhH--HHHHH----HhCCCCEEEEecccccccC
Q 028418 169 CPS------------------------EGF--ISNAG----SLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 169 h~a------------------------~g~--ll~AA----~~aGVkriV~vSS~~Vyg~ 198 (209)
|++ .++ +++++ ++.+..+||++||..++..
T Consensus 102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 161 (260)
T 3un1_A 102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP 161 (260)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC
Confidence 982 011 33443 6778899999999877643
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=4.3e-13 Score=112.67 Aligned_cols=108 Identities=15% Similarity=0.111 Sum_probs=79.3
Q ss_pred CCccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCC-CHHHHHHhhcCCcEEEE
Q 028418 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-NKKFLKTALRGVRSIIC 169 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~-D~~sL~~AL~GvDaVIh 169 (209)
.+.+....+++||||||+|+||++++++|+++|++|+++.|+++..... + .+.++ +|+. +.+.+.+.+.++|+|||
T Consensus 11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~-~~~~~-~D~~~~~~~~~~~~~~iD~lv~ 87 (249)
T 1o5i_A 11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-G-HRYVV-CDLRKDLDLLFEKVKEVDILVL 87 (249)
T ss_dssp -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-C-SEEEE-CCTTTCHHHHHHHSCCCSEEEE
T ss_pred hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh-C-CeEEE-eeHHHHHHHHHHHhcCCCEEEE
Confidence 3445577788999999999999999999999999999999987544332 3 46677 9993 44455555568999999
Q ss_pred cC----h--------------------hH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 170 PS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 170 ~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
++ . ++ +++.+++.+..+||++||..++....+
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 149 (249)
T 1o5i_A 88 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN 149 (249)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCC
Confidence 82 0 11 355566778999999999988765443
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=3.1e-13 Score=112.13 Aligned_cols=108 Identities=11% Similarity=0.115 Sum_probs=84.2
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc---CCcEE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR---GVRSI 167 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~---GvDaV 167 (209)
....+.++||||||+|+||++++++|+++|++|.++.|+.++... .....+.++.+|++|++.+.++++ ++|.|
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 446677899999999999999999999999999999998865432 334578999999999999999887 78999
Q ss_pred EEcC------------------------hhH--HH----HHHHhCCCCEEEEecccccccCCCC
Q 028418 168 ICPS------------------------EGF--IS----NAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 168 Ih~a------------------------~g~--ll----~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
||++ .++ ++ ...++.+..+||++||...+...++
T Consensus 89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 152 (249)
T 3f9i_A 89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG 152 (249)
T ss_dssp EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC
Confidence 9982 011 22 3335567789999999887755443
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.6e-13 Score=113.98 Aligned_cols=102 Identities=15% Similarity=0.107 Sum_probs=80.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhh---c----CCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES---F----GTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~---~----~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
.++++|||||+|+||++++++|+++|++|+++.|++++ .... . +..+.++.+|++|++++.++++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 35789999999999999999999999999999998865 3221 1 4568899999999999998886
Q ss_pred CCcEEEEcC-------------h-----------hH--H----HHHHHhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++|.|||++ + ++ + +..+++.+..+||++||...+...
T Consensus 83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 149 (260)
T 1x1t_A 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS 149 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC
Confidence 799999982 0 11 2 333455678999999998876543
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.8e-13 Score=112.81 Aligned_cols=74 Identities=16% Similarity=0.155 Sum_probs=63.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC-Ccchhhh------cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~-~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++||||||+|+||++++++|+++|++|++++|+ +++.... .+..++++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 346799999999999999999999999999999998 6543321 14568999999999999999987
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|+|||+
T Consensus 85 ~id~vi~~ 92 (258)
T 3afn_B 85 GIDVLINN 92 (258)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 89999998
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.46 E-value=1.5e-13 Score=113.01 Aligned_cols=98 Identities=18% Similarity=0.278 Sum_probs=76.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
++||||||||+||++++++|+++|++|+++ .|++++... ..+..+.++.+|++|++++.++++ ++|
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999999999999995 677654321 124568899999999999999886 799
Q ss_pred EEEEcC-------------h-----------hH--HHHHH----HhCCCCEEEEeccccccc
Q 028418 166 SIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 166 aVIh~a-------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg 197 (209)
.|||++ . ++ +++++ ++.+..|||++||...+.
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 143 (244)
T 1edo_A 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI 143 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC
Confidence 999982 0 11 23333 345889999999986543
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=5.6e-13 Score=113.24 Aligned_cols=99 Identities=16% Similarity=0.199 Sum_probs=79.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...++++|||||+|+||++++++|+++|++|+++.|++++... ..+..+.++.+|++|++++.++++
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4556799999999999999999999999999999998765421 124568889999999999988876
Q ss_pred -CCcEEEEcC-------------h-----------hH--H----HHHHHhCCCCEEEEecccc
Q 028418 163 -GVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 163 -GvDaVIh~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~ 194 (209)
++|+|||++ + ++ + +..+++.+..+||++||..
T Consensus 98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~ 160 (267)
T 1vl8_A 98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT 160 (267)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGG
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcc
Confidence 789999982 0 11 2 3334567889999999987
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-13 Score=113.65 Aligned_cols=100 Identities=14% Similarity=0.217 Sum_probs=78.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe-CCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR-~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+|+||++++++|+++|++|+++.| ++++... ..+..+.++.+|++|++++.++++ +
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999 5544321 124568899999999999998886 7
Q ss_pred CcEEEEcC----h--------------------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ . ++ ++..+++.+..+||++||...+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 146 (246)
T 2uvd_A 83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT 146 (246)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC
Confidence 99999982 0 11 23445567889999999986643
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=4.2e-13 Score=109.62 Aligned_cols=72 Identities=24% Similarity=0.282 Sum_probs=63.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhhhc---CCceEEEEccCCCHHHHHHhhc---------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR---------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~~~---~~~vevv~GDl~D~~sL~~AL~---------Gv 164 (209)
+++||||||+|+||++++++|+++| ++|+++.|++++..... +..++++.+|++|++++.++++ ++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i 82 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence 4689999999999999999999999 99999999886653221 3468999999999999999887 89
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|+|||+
T Consensus 83 d~li~~ 88 (250)
T 1yo6_A 83 SLLINN 88 (250)
T ss_dssp CEEEEC
T ss_pred cEEEEC
Confidence 999998
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=5e-13 Score=112.06 Aligned_cols=100 Identities=19% Similarity=0.217 Sum_probs=78.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
++++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++ ++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 36899999999999999999999999999999987654321 14468899999999999999887 899
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCC-CCEEEEecccccccC
Q 028418 166 SIICPS-------------E-----------GF------ISNAGSLKG-VQHVILLSQRQRWHS 198 (209)
Q Consensus 166 aVIh~a-------------~-----------g~------ll~AA~~aG-VkriV~vSS~~Vyg~ 198 (209)
.|||++ + ++ ++..+++.+ ..+||++||...+..
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 145 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG 145 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC
Confidence 999982 0 11 233344556 789999999876543
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=5.1e-13 Score=111.35 Aligned_cols=103 Identities=13% Similarity=0.107 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhh---cCCcEEEEcC-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTAL---RGVRSIICPS- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL---~GvDaVIh~a- 171 (209)
..++++|||||+|+||++++++|+++|++|+++.|++++...... .+++++.+|++|++++.+++ .++|.|||++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 346799999999999999999999999999999998765433221 25889999999999998774 4789999982
Q ss_pred ------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 172 ------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 ------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ ++ ++++ +++.+..+||++||...+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 140 (246)
T 2ag5_A 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG 140 (246)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC
T ss_pred cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC
Confidence 0 11 2333 345678999999998776443
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=2.5e-13 Score=114.26 Aligned_cols=102 Identities=13% Similarity=0.150 Sum_probs=79.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hc-----CCceEEEEccCCCHHHHHHhhc-------C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~-----~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.+++|||||+|+||++++++|+++|++|++++|++++... .+ +..+.++.+|++|++++.++++ .
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 86 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999998765321 11 2358899999999999998876 4
Q ss_pred CcEEEEcC-----h-----------hH------HHHHHHhCC---CCEEEEecccccccCCC
Q 028418 164 VRSIICPS-----E-----------GF------ISNAGSLKG---VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a-----~-----------g~------ll~AA~~aG---VkriV~vSS~~Vyg~~~ 200 (209)
+|+|||++ . +. +++++++.+ ..+||++||...+...+
T Consensus 87 id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 148 (267)
T 2gdz_A 87 LDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA 148 (267)
T ss_dssp CCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT
T ss_pred CCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC
Confidence 69999982 0 11 344555543 78999999988776543
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.8e-13 Score=113.78 Aligned_cols=100 Identities=22% Similarity=0.260 Sum_probs=76.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c---C-------CceEEEEccCCCHHHHHHhhcCC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F---G-------TYVESMAGDASNKKFLKTALRGV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~---~-------~~vevv~GDl~D~~sL~~AL~Gv 164 (209)
.+++||||||+|+||++++++|+++|++|+++.|++++.... . + ..+.++.+|++|++++.++++.+
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 457899999999999999999999999999999987654321 1 1 45789999999999999888764
Q ss_pred --------cEEEEcC----h--------------------hH--HHHHH----HhCC-CCEEEEeccccccc
Q 028418 165 --------RSIICPS----E--------------------GF--ISNAG----SLKG-VQHVILLSQRQRWH 197 (209)
Q Consensus 165 --------DaVIh~a----~--------------------g~--ll~AA----~~aG-VkriV~vSS~~Vyg 197 (209)
|+|||++ . ++ +++++ ++.+ ..|||++||...+.
T Consensus 86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 157 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV 157 (264)
T ss_dssp HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH
T ss_pred HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc
Confidence 9999982 0 11 33333 3345 68999999986543
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=4.1e-13 Score=114.42 Aligned_cols=102 Identities=18% Similarity=0.237 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++||||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++ +
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4467999999999999999999999999999988876543321 14568899999999999998874 7
Q ss_pred CcEEEEcC----h--------------------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 164 VRSIICPS----E--------------------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a----~--------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+|+|||++ . ++ ++..+++.+..+||++||...+..
T Consensus 122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 186 (285)
T 2c07_A 122 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG 186 (285)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC
Confidence 89999982 0 11 233344678899999999866543
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=6.3e-13 Score=111.65 Aligned_cols=98 Identities=15% Similarity=0.128 Sum_probs=77.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
.++++|||||+|+||++++++|+++|++|.++.|++++ ... .. . .++.+|++|++++.++++ ++|.|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46789999999999999999999999999999998865 321 12 3 789999999999988875 78999
Q ss_pred EEcC----h--------------------hH--HH----HHHHhCCCCEEEEecccccccC
Q 028418 168 ICPS----E--------------------GF--IS----NAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 168 Ih~a----~--------------------g~--ll----~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
||++ . ++ ++ ..+++.+..+||++||...+..
T Consensus 82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 142 (256)
T 2d1y_A 82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA 142 (256)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC
Confidence 9982 0 11 23 3345678899999999876544
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-13 Score=113.60 Aligned_cols=100 Identities=14% Similarity=0.107 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.+++||||||+|+||++++++|++ +|++|+++.|++++.... .+..++++.+|++|++++.++++ +
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 457899999999999999999999 999999999987644321 13468899999999999999887 8
Q ss_pred CcEEEEcC------------h------------hH--HHHHHHhCC--CCEEEEeccccccc
Q 028418 164 VRSIICPS------------E------------GF--ISNAGSLKG--VQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a------------~------------g~--ll~AA~~aG--VkriV~vSS~~Vyg 197 (209)
+|+|||++ . ++ +++++...- ..|||++||..++.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~ 144 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVR 144 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhc
Confidence 99999982 0 01 455555432 25999999987763
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.7e-14 Score=113.03 Aligned_cols=97 Identities=12% Similarity=0.166 Sum_probs=78.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhc---CCcEEEEcC--
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---GVRSIICPS-- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~a-- 171 (209)
++||||||+|+||++++++|+++ +|++++|++.+.... .. . +++.+|++|++++.++++ ++|.|||++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 76 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-A-RALPADLADELEAKALLEEAGPLDLLVHAVGK 76 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-C-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-C-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 57999999999999999999988 999999987654322 22 1 889999999999999998 899999982
Q ss_pred --h--------------------h--HHHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --E--------------------G--FISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --~--------------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
. + .+++++++.+.++||++||..++....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~ 129 (207)
T 2yut_A 77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVP 129 (207)
T ss_dssp CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSST
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCC
Confidence 0 1 156777777889999999988775543
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.44 E-value=8.2e-13 Score=111.13 Aligned_cols=104 Identities=14% Similarity=0.214 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
..++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++++|++|++++.++++ ++|.
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 456799999999999999999999999999999998865432 235568999999999999999887 8999
Q ss_pred EEEcC-------------h-----------hH--HHHHH----HhCC-CCEEEEecccccccCCC
Q 028418 167 IICPS-------------E-----------GF--ISNAG----SLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll~AA----~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
|||++ + ++ +++++ ++.+ -.+||++||...+...+
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 150 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA 150 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC
Confidence 99982 0 11 33333 2333 57999999987765543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=7.8e-13 Score=109.96 Aligned_cols=74 Identities=18% Similarity=0.144 Sum_probs=64.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
..+++||||||+|+||++++++|+++|++|+++.|++++... .++..+.++.+|++|++++.++++ ++|+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 345799999999999999999999999999999998866432 234568999999999999999987 8999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 90 li~~ 93 (265)
T 2o23_A 90 AVNC 93 (265)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9998
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.44 E-value=4.4e-13 Score=113.03 Aligned_cols=102 Identities=13% Similarity=0.125 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
..+++||||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4467999999999999999999999999999999987654221 245688999999999999988864
Q ss_pred CcEEEEcC----h----------------------h------HHHHHHHhCCCCEEEEecccccccC
Q 028418 164 VRSIICPS----E----------------------G------FISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a----~----------------------g------~ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+|+|||++ . + .+++++++.+.++||++||..++..
T Consensus 112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 178 (279)
T 3ctm_A 112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV 178 (279)
T ss_dssp CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC
T ss_pred CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC
Confidence 89999981 1 0 1455667778999999999876543
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=4.4e-13 Score=113.94 Aligned_cols=103 Identities=10% Similarity=0.077 Sum_probs=79.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhcC------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG------ 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~G------ 163 (209)
..+++||||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++.
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 4567999999999999999999999999999999987654321 145689999999999999988864
Q ss_pred -CcEEEEcC----h--------------------hH--HHHHH----H-hCCCCEEEEecccccccCC
Q 028418 164 -VRSIICPS----E--------------------GF--ISNAG----S-LKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 -vDaVIh~a----~--------------------g~--ll~AA----~-~aGVkriV~vSS~~Vyg~~ 199 (209)
+|+|||++ . ++ +++++ + +.+..+||++||..++...
T Consensus 104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 171 (302)
T 1w6u_A 104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS 171 (302)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC
Confidence 49999982 0 11 22333 2 4567899999998776543
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=8.8e-13 Score=111.96 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhh--------cC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------RG 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL--------~G 163 (209)
..+++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++.+.+++ .+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 99 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 99 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999999999999987654321 2456889999999999998887 57
Q ss_pred CcEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|.|||++ + ++ ++++ +++.+..+||++||..++...+
T Consensus 100 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~ 166 (273)
T 1ae1_A 100 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP 166 (273)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC
Confidence 89999982 0 11 2333 3466789999999998876544
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.2e-12 Score=109.57 Aligned_cols=98 Identities=9% Similarity=0.161 Sum_probs=79.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (209)
..+++|||||+|+||++++++|+++|++|+++.|+++.. .. ++.++.+|++|++++.++++ ++|.|||+
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~--~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~ 81 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE--QY--PFATEVMDVADAAQVAQVCQRLLAETERLDALVNA 81 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS--CC--SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh--cC--CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 457899999999999999999999999999999987642 11 37889999999999998886 79999998
Q ss_pred C-------------h-----------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 171 S-------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a-------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ + ++ +++++ ++.+..+||++||...+...
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~ 140 (250)
T 2fwm_X 82 AGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR 140 (250)
T ss_dssp CCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC
Confidence 2 0 11 33333 56788999999998876544
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-13 Score=113.71 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=81.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
..+++|||||+|+||++++++|+++|++|+++.|++++... ..+..+.++.+|++|++++.++++ .+|.|
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45789999999999999999999999999999998765432 224568899999999999988876 46999
Q ss_pred EEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 168 ICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 168 Ih~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
||++ + ++ ++..+++.+ .+||++||...+...+
T Consensus 85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~ 146 (253)
T 1hxh_A 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE 146 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCC
Confidence 9982 0 00 344556677 9999999988776543
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.44 E-value=9.5e-13 Score=110.46 Aligned_cols=101 Identities=18% Similarity=0.152 Sum_probs=79.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc--hhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~--a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
++++|||||+|+||++++++|+++|++|.++.|++++ .... .+..+.++.+|++|++++.++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999999998765 3211 14568899999999999998886 8
Q ss_pred CcEEEEcC-------------h-----------hH--HHHH----HHhCCC-CEEEEecccccccCC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNA----GSLKGV-QHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~A----A~~aGV-kriV~vSS~~Vyg~~ 199 (209)
+|.|||++ + ++ ++++ +++.+. .+||++||...+...
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 148 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF 148 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC
Confidence 99999982 0 11 2333 344577 899999998776543
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-12 Score=110.10 Aligned_cols=101 Identities=14% Similarity=0.176 Sum_probs=79.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.++++ ++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457999999999999999999999999999999987654321 24568899999999999988875 79
Q ss_pred cEEEEcC------------------------hhH--HHH----HHHhCCCCEEEEecccccccCC
Q 028418 165 RSIICPS------------------------EGF--ISN----AGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 165 DaVIh~a------------------------~g~--ll~----AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|.|||++ .++ +++ ..++.+ .+||++||...+...
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~ 149 (247)
T 2jah_A 86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV 149 (247)
T ss_dssp SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC
Confidence 9999972 011 233 334556 899999998776543
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=5.9e-13 Score=110.44 Aligned_cols=101 Identities=17% Similarity=0.287 Sum_probs=77.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
..++||||||+|+||++++++|+++|++|+++.|+..+... ..+..++++.+|++|++++.++++.
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 92 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 92 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 45689999999999999999999999999999997654321 1245689999999999999888753
Q ss_pred CcEEEEcC----h--------------------hH--HHHHH----HhCC-CCEEEEecccccccC
Q 028418 164 VRSIICPS----E--------------------GF--ISNAG----SLKG-VQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a----~--------------------g~--ll~AA----~~aG-VkriV~vSS~~Vyg~ 198 (209)
+|.|||++ . ++ +++++ ++.+ ..+||++||..++..
T Consensus 93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~ 158 (265)
T 1h5q_A 93 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQII 158 (265)
T ss_dssp EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcc
Confidence 89999982 0 11 33333 2333 589999999876543
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.44 E-value=7.1e-13 Score=110.06 Aligned_cols=98 Identities=17% Similarity=0.297 Sum_probs=77.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-------cCCcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-------~GvDaVIh~a 171 (209)
++++|||||+|+||++++++|+++|++|+++.|++++.....+ +.++.+|++| +++.+++ .++|.|||++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~A 78 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAA 78 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHT--CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhC--cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECC
Confidence 4689999999999999999999999999999999876443333 7889999999 7766654 3799999982
Q ss_pred -------------h-----------hH--H----HHHHHhCCCCEEEEecccccccCC
Q 028418 172 -------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ ++ + +..+++.+..|||++||...+...
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 136 (239)
T 2ekp_A 79 AVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG 136 (239)
T ss_dssp CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC
Confidence 0 11 2 333456788999999998877654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=7.2e-13 Score=111.86 Aligned_cols=74 Identities=12% Similarity=0.160 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---------cCCceEEEEccCCCHHHHHHhhc-----
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---------~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
..++++|||||+|+||++++++|+++|++|+++.|++++.... .+..+.++.+|++|++++.++++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999987654311 12357899999999999999887
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
++|.|||+
T Consensus 84 ~g~id~lv~~ 93 (278)
T 1spx_A 84 FGKLDILVNN 93 (278)
T ss_dssp HSCCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 89999998
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.43 E-value=9e-13 Score=111.05 Aligned_cols=107 Identities=16% Similarity=0.106 Sum_probs=83.7
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-----
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
|.....+++|||||+|+||++++++|+++|++|.++.|+.++.... .+..++++.+|++|++++.++++
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 4455678999999999999999999999999999999988664321 24568999999999999988875
Q ss_pred --CCcEEEEcC-h------------------------hH--H----HHHHHhCCCCEEEEecccccccCCC
Q 028418 163 --GVRSIICPS-E------------------------GF--I----SNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 --GvDaVIh~a-~------------------------g~--l----l~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|.|||++ . ++ + +..+++.+..+||++||...+....
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 174 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVA 174 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCT
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC
Confidence 489999982 0 11 2 3334567889999999988765543
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-12 Score=110.24 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=82.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------Gv 164 (209)
..++++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.++++ ++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 3467899999999999999999999999999999988765321 24568999999999999999887 67
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.|||++ + ++ ++..+++.+..+||++||...+....
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 150 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGS 150 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCT
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCC
Confidence 9999982 0 11 23344666778999999987665443
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=7e-13 Score=108.33 Aligned_cols=66 Identities=20% Similarity=0.327 Sum_probs=59.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc------CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~------GvDaVIh~ 170 (209)
+++||||||||+||++++++|+++|++|+++.|+++ . ..++++.+|++|++++.++++ ++|.|||+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ 73 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSA 73 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence 468999999999999999999999999999999876 2 235889999999999999987 88999998
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.42 E-value=9.1e-13 Score=109.57 Aligned_cols=101 Identities=18% Similarity=0.159 Sum_probs=78.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..++++|||||+|+||++++++|+++|++|.++.|+.++.... .+..+.++.+|++|++++.++++ +
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3467999999999999999999999999999999987654321 24568899999999999998886 8
Q ss_pred CcEEEEcC-h--------------------------hH------HHHHHHhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS-E--------------------------GF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a-~--------------------------g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
+|+|||++ . +. ++..+++.+..+||++||...+.
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 153 (253)
T 3qiv_A 87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL 153 (253)
T ss_dssp CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----
T ss_pred CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC
Confidence 99999982 0 10 33445667789999999988763
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=7.2e-13 Score=110.83 Aligned_cols=100 Identities=17% Similarity=0.189 Sum_probs=77.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
..+++|||||+|+||++++++|+++|++|+++.|++++..... ..+++++.+|++|++++.++++ .+|.|||
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3578999999999999999999999999999999876543221 1137899999999999988876 4899999
Q ss_pred cC-------------h-----------hH--H----HHHHHhCCCCEEEEeccccccc
Q 028418 170 PS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vyg 197 (209)
++ + ++ + +..+++.+..+||++||...++
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~ 141 (245)
T 1uls_A 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG 141 (245)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcC
Confidence 82 0 11 2 3334456889999999988444
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-12 Score=111.35 Aligned_cols=104 Identities=15% Similarity=0.150 Sum_probs=83.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
..++++|||||+|+||++++++|+++|++|.++.|+.+.... ..+..+.++.+|++|++++.++++ ++|.
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 446789999999999999999999999999999998865432 245678999999999999998886 7899
Q ss_pred EEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|||++ + ++ ++..+++.+..+||++||...+....
T Consensus 105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 168 (277)
T 4dqx_A 105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA 168 (277)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC
Confidence 99982 0 11 23334567778999999988775543
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=2.8e-12 Score=108.96 Aligned_cols=105 Identities=11% Similarity=0.059 Sum_probs=84.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
..++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ ++|.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 456799999999999999999999999999999999876532 235678999999999999999887 8999
Q ss_pred EEEcC----h----------------------hH--HHHHH----HhCCCCEEEEecccccccCCCC
Q 028418 167 IICPS----E----------------------GF--ISNAG----SLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 167 VIh~a----~----------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
|||++ . ++ +++++ ++.+..+||++||...+.....
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~ 155 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM 155 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC
Confidence 99982 0 11 33444 6778899999999887655443
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.4e-12 Score=108.75 Aligned_cols=76 Identities=12% Similarity=0.176 Sum_probs=63.6
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCC---CcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhc----
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G---~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
....+++||||||+|+||++++++|+++| ++|.++.|++++.... .+..++++.+|++|++++.++++
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence 35667899999999999999999999999 9999999988653211 13468999999999999999887
Q ss_pred -----CCcEEEEc
Q 028418 163 -----GVRSIICP 170 (209)
Q Consensus 163 -----GvDaVIh~ 170 (209)
++|+|||+
T Consensus 97 ~~g~~~id~li~~ 109 (267)
T 1sny_A 97 VTKDQGLNVLFNN 109 (267)
T ss_dssp HHGGGCCSEEEEC
T ss_pred hcCCCCccEEEEC
Confidence 79999998
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.7e-12 Score=110.64 Aligned_cols=104 Identities=19% Similarity=0.303 Sum_probs=81.6
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
+.....++||||||+|+||++++++|+++|++|.++.|+.+... ..++.+.+|++|++++.++++ .+|.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 84 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI 84 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 34566789999999999999999999999999999999886643 246889999999999998886 7899
Q ss_pred EEEcC-------------h-----------hH--HHH----HHHhCCCCEEEEecccccccCCCC
Q 028418 167 IICPS-------------E-----------GF--ISN----AGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll~----AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
|||++ + ++ +++ .+++.+..+||++||...+....+
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 149 (269)
T 3vtz_A 85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN 149 (269)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC
Confidence 99982 0 11 223 345567899999999988765543
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.3e-12 Score=111.05 Aligned_cols=105 Identities=14% Similarity=0.192 Sum_probs=80.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
...++++|||||+|+||++++++|+++|++|.++.|+.++.... ...++.++.+|++|++++.++++ .+|+|
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 34567899999999999999999999999999999998764322 12247899999999999988875 68999
Q ss_pred EEcC------------h-----------hH--H----HHHHHhCCCCEEEEecccccccCCC
Q 028418 168 ICPS------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 168 Ih~a------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
||++ + ++ + +..+++.+..+||++||...+....
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~ 165 (260)
T 3gem_A 104 VHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS 165 (260)
T ss_dssp EECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS
T ss_pred EECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC
Confidence 9982 0 11 2 2334566789999999988765544
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-12 Score=111.44 Aligned_cols=105 Identities=12% Similarity=0.131 Sum_probs=80.6
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
-....+++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ ++
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI 102 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 34556799999999999999999999999999999998765432 345678999999999999998886 79
Q ss_pred cEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 165 RSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 165 DaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|.|||++ .++ ++..+++.+..+||++||...+...
T Consensus 103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 167 (266)
T 3grp_A 103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN 167 (266)
T ss_dssp CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC
Confidence 9999982 011 3344556788999999997765443
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.4e-12 Score=108.33 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.++++ ++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 467999999999999999999999999999999988654321 24568899999999999998876 78
Q ss_pred cEEEEcC-------------h-----------hH--HHHHH-----HhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS-------------E-----------GF--ISNAG-----SLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~--ll~AA-----~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.|||++ + ++ +.+++ ++.+..+||++||...+...+
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 151 (257)
T 3imf_A 85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP 151 (257)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC
Confidence 9999982 0 11 23333 445678999999987765543
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.7e-12 Score=109.36 Aligned_cols=103 Identities=15% Similarity=0.141 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.++++ +
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3467999999999999999999999999999999987654321 13468899999999999888775 7
Q ss_pred CcEEEEcC--h-----------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 164 VRSIICPS--E-----------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a--~-----------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|.|||++ . ++ ++++ +++.+..+||++||...+...
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 151 (262)
T 1zem_A 85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP 151 (262)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC
Confidence 89999972 0 11 2333 345578899999998765443
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-12 Score=114.46 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCC--ceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT--YVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~--~vevv~GDl~D~~sL~~AL~------ 162 (209)
..+++||||||+|+||++++++|+++|++|++++|+.++.... .+. .+.++.+|++|++++.++++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 4567999999999999999999999999999999988654321 122 68999999999999998886
Q ss_pred -CCcEEEEcC------------------------hhH--HHHHH----HhC------CCCEEEEecccccccCCCC
Q 028418 163 -GVRSIICPS------------------------EGF--ISNAG----SLK------GVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 -GvDaVIh~a------------------------~g~--ll~AA----~~a------GVkriV~vSS~~Vyg~~~~ 201 (209)
++|.|||++ .|+ +++++ .+. +-.+||++||...+...++
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~ 161 (319)
T 3ioy_A 86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS 161 (319)
T ss_dssp CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence 679999982 011 23332 222 4678999999887765443
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.6e-12 Score=110.02 Aligned_cols=101 Identities=18% Similarity=0.192 Sum_probs=80.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cC-CceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~-~~vevv~GDl~D~~sL~~AL~------ 162 (209)
....+++|||||+|+||++++++|+++|++|.++.|+.++.... .+ ..+.++++|++|++++.++++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 45568999999999999999999999999999999988654321 12 468999999999999998876
Q ss_pred -CCcEEEEcC-------------h-----------hH--HHH----HHHhCCCCEEEEecccccc
Q 028418 163 -GVRSIICPS-------------E-----------GF--ISN----AGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 163 -GvDaVIh~a-------------~-----------g~--ll~----AA~~aGVkriV~vSS~~Vy 196 (209)
++|.|||++ + ++ +++ .+++.+..+||++||....
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~ 151 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGP 151 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc
Confidence 899999982 0 11 233 3445588999999997653
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.40 E-value=7.7e-13 Score=113.10 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=79.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhc-------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..++++|||||+|+||++++++|+++|++|+++.|++++.... .. ..+.++.+|++|++++.++++ ++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL 106 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 4567899999999999999999999999999999987654321 11 258889999999999988876 78
Q ss_pred cEEEEcC-------------h-----------hH------HHHHHHhCCC----CEEEEecccccccCC
Q 028418 165 RSIICPS-------------E-----------GF------ISNAGSLKGV----QHVILLSQRQRWHSS 199 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~------ll~AA~~aGV----kriV~vSS~~Vyg~~ 199 (209)
|+|||++ + ++ ++..+++.+. .+||++||...+...
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~ 175 (276)
T 2b4q_A 107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM 175 (276)
T ss_dssp SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC
Confidence 9999982 0 11 2233344454 899999998876544
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-12 Score=111.14 Aligned_cols=100 Identities=10% Similarity=0.135 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----------cCCceEEEEccCCCHHHHHHhhc---
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALR--- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----------~~~~vevv~GDl~D~~sL~~AL~--- 162 (209)
...++||||||+|+||++++++|+++|++|+++.|+.++.... .+..+.++.+|++|++++.++++
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999987543211 24568999999999999998886
Q ss_pred ----CCcEEEEcC------------------------hhH--HHHHHH----hCCCCEEEEecccccc
Q 028418 163 ----GVRSIICPS------------------------EGF--ISNAGS----LKGVQHVILLSQRQRW 196 (209)
Q Consensus 163 ----GvDaVIh~a------------------------~g~--ll~AA~----~aGVkriV~vSS~~Vy 196 (209)
.+|+|||++ .++ +++++. +.+..+||++||...+
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 163 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA 163 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeeccc
Confidence 489999982 011 344432 2356899999998733
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-12 Score=109.86 Aligned_cols=96 Identities=17% Similarity=0.203 Sum_probs=76.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC-------CcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G-------vDaVIh 169 (209)
..++++|||||+|+||++++++|+++|++|.++.|++++.. .+.++.+|++|++++.++++. +|.|||
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34678999999999999999999999999999999876543 278899999999999888764 699999
Q ss_pred cC----h--------------------hH--HHH----HHHhCCCCEEEEeccccccc
Q 028418 170 PS----E--------------------GF--ISN----AGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a----~--------------------g~--ll~----AA~~aGVkriV~vSS~~Vyg 197 (209)
++ . ++ +++ .+++.+..+||++||...+.
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~ 151 (253)
T 2nm0_A 94 NAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL 151 (253)
T ss_dssp ECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC
Confidence 72 0 11 233 34456889999999987653
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-12 Score=108.22 Aligned_cols=96 Identities=14% Similarity=0.206 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
..++++|||||+|+||++++++|+++|++|+++.|++++.... ..+.+|++|++++.++++ ++|.|||
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----cCeeccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3467899999999999999999999999999999988665432 248899999999988876 6799999
Q ss_pred cC----h--------------------hH--HHH----HHHhCCCCEEEEeccccccc
Q 028418 170 PS----E--------------------GF--ISN----AGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a----~--------------------g~--ll~----AA~~aGVkriV~vSS~~Vyg 197 (209)
++ . ++ +++ .+++.+..+||++||...+.
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 145 (247)
T 1uzm_A 88 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW 145 (247)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC--
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc
Confidence 82 0 11 233 34567889999999986653
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.9e-12 Score=110.84 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=83.3
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-----
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
+....++++|||||+|+||++++++|+++|++|+++.|+.++.... .+..+.++++|++|++++.++++
T Consensus 26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 3446678999999999999999999999999999999988654321 24568999999999999998886
Q ss_pred --CCcEEEEcC-------------h-----------hH--HHHH----HHhCC-CCEEEEecccccccCCC
Q 028418 163 --GVRSIICPS-------------E-----------GF--ISNA----GSLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 --GvDaVIh~a-------------~-----------g~--ll~A----A~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
++|.|||++ + ++ ++++ .++.+ ..+||++||...+...+
T Consensus 106 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 176 (301)
T 3tjr_A 106 LGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA 176 (301)
T ss_dssp HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC
Confidence 789999982 0 11 2333 34445 68999999987765543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.5e-12 Score=108.40 Aligned_cols=105 Identities=9% Similarity=0.124 Sum_probs=83.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
....+++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3456799999999999999999999999999999998765432 124568999999999999998886
Q ss_pred CCcEEEEcC------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 163 GVRSIICPS------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++|.|||++ + ++ ++++ +++.+..+||++||...+....
T Consensus 89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 155 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV 155 (256)
T ss_dssp CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCT
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCC
Confidence 789999982 0 11 2333 4567788999999988765544
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.39 E-value=5.4e-12 Score=107.10 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=81.9
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc------------hh------hhcCCceEEEEccCCCHHH
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------------AM------ESFGTYVESMAGDASNKKF 156 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~------------a~------~~~~~~vevv~GDl~D~~s 156 (209)
.....+++|||||+|+||++++++|+++|++|.++.|++.. .. ...+..+.++.+|++|+++
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA 85 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 34567899999999999999999999999999999997421 11 1234568899999999999
Q ss_pred HHHhhc-------CCcEEEEcC------------------------hhH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 157 LKTALR-------GVRSIICPS------------------------EGF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 157 L~~AL~-------GvDaVIh~a------------------------~g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
+.++++ ++|.|||++ .++ ++++ +++.+..+||++||...+...
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 165 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN 165 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC
Confidence 998886 799999982 011 2333 456678899999998776554
Q ss_pred C
Q 028418 200 S 200 (209)
Q Consensus 200 ~ 200 (209)
.
T Consensus 166 ~ 166 (281)
T 3s55_A 166 F 166 (281)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.9e-12 Score=107.88 Aligned_cols=107 Identities=15% Similarity=0.158 Sum_probs=79.7
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchh------hhcCCceEEEEccCCCHHHHHHhhc----
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAM------ESFGTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~------~~~~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
....+.++||||||+|+||++++++|+++|++|.++. |+..... ...+..+.++.+|++|++++.++++
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA 87 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence 3456678999999999999999999999999999998 4444322 1224568899999999999998886
Q ss_pred ---CCcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 163 ---GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 ---GvDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|.|||++ + ++ ++..+++.+..+||++||...+....
T Consensus 88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (256)
T 3ezl_A 88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF 158 (256)
T ss_dssp HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC
Confidence 789999982 0 11 23445667889999999987765443
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-12 Score=108.94 Aligned_cols=100 Identities=16% Similarity=0.215 Sum_probs=79.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
+++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++.+|++|++++.++++ ++|.|||
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 479999999999999999999999999999998765432 223468899999999999999876 6899999
Q ss_pred cC---h----------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 170 PS---E----------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a---~----------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ . ++ ++++ +++.+..+||++||...+...
T Consensus 81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~ 141 (248)
T 3asu_A 81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY 141 (248)
T ss_dssp CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC
T ss_pred CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC
Confidence 72 0 11 2333 345678999999998776544
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=5.1e-12 Score=107.54 Aligned_cols=102 Identities=11% Similarity=0.094 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...+++|||||+|+||++++++|+++|++|.++.|+..... ...+..+.++.+|++|++++.++++
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45679999999999999999999999999999999875421 1124568899999999999887764
Q ss_pred CCcEEEEcC----h--------------------hH--HHHHHHhC--CCCEEEEecccccccC
Q 028418 163 GVRSIICPS----E--------------------GF--ISNAGSLK--GVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 GvDaVIh~a----~--------------------g~--ll~AA~~a--GVkriV~vSS~~Vyg~ 198 (209)
++|+|||++ . ++ +++++... +..+||++||...+..
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~ 170 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK 170 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC
Confidence 789999982 0 11 45555543 6789999999876543
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-12 Score=108.27 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=79.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchh------hhcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM------ESFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~------~~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||+|+||++++++|+++|++|.++.|+. +... ...+..+.++++|++|++++.++++ ++
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 83 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSL 83 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999998855 3221 1124568899999999999998886 88
Q ss_pred cEEEEcC-------------h-----------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 165 RSIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
|.|||++ + ++ +++++ ++.+..+||++||...+...
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 148 (246)
T 3osu_A 84 DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN 148 (246)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC
Confidence 9999982 0 11 34444 66788999999997665443
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.8e-12 Score=111.23 Aligned_cols=103 Identities=21% Similarity=0.214 Sum_probs=81.3
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cC-CceEEEEccCCCHHHHHHhhc----
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~-~~vevv~GDl~D~~sL~~AL~---- 162 (209)
+.....+++|||||+|+||++++++|+++|++|.++.|+.++.... .+ ..+.++.+|++|++++.++++
T Consensus 36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD 115 (293)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 4455678999999999999999999999999999999988765321 11 468899999999999888765
Q ss_pred ---CCcEEEEcC-------------h-----------hH--HHHHH----HhCCCCEEEEecccccc
Q 028418 163 ---GVRSIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRW 196 (209)
Q Consensus 163 ---GvDaVIh~a-------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vy 196 (209)
.+|.|||++ + ++ +++++ ++.+..+||++||...+
T Consensus 116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~ 182 (293)
T 3rih_A 116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGP 182 (293)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTT
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhc
Confidence 679999982 0 11 34443 56788999999997753
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.6e-12 Score=113.14 Aligned_cols=99 Identities=14% Similarity=0.170 Sum_probs=79.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hh------hhcCCceEEEEccCCCHHHHHHhhc-----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AM------ESFGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~------~~~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
++++|||||+|+||++++++|+++|++|++.+|+... .. ...+..+.++.+|++|++++.++++
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~ 84 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE 84 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999997421 11 1124568999999999999999987
Q ss_pred --CCcEEEEcC------------------------hhH--HHHHH----HhCCCCEEEEeccccccc
Q 028418 163 --GVRSIICPS------------------------EGF--ISNAG----SLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 163 --GvDaVIh~a------------------------~g~--ll~AA----~~aGVkriV~vSS~~Vyg 197 (209)
++|+|||++ .|+ +++++ ++.+..+||++||...+.
T Consensus 85 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~ 151 (324)
T 3u9l_A 85 DGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAG 151 (324)
T ss_dssp HSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhcc
Confidence 899999982 011 34444 677889999999988764
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.2e-12 Score=105.29 Aligned_cols=101 Identities=9% Similarity=0.112 Sum_probs=77.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhcCC----cEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGV----RSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~Gv----DaVIh~a 171 (209)
|+++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++.+|++|++++.++++.+ |.|||++
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A 80 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA 80 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence 4689999999999999999999999999999998866532 23456889999999999999999766 8999982
Q ss_pred -------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 172 -------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+ ++ ++++ .++.+. +||++||...+....
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~ 138 (230)
T 3guy_A 81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKA 138 (230)
T ss_dssp CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCT
T ss_pred CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCC
Confidence 0 11 2333 333343 999999988775544
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.38 E-value=3e-12 Score=109.37 Aligned_cols=103 Identities=15% Similarity=0.210 Sum_probs=79.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ .+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI 102 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 35689999999999999999999999999999998865432 124568999999999999988875 68
Q ss_pred cEEEEcC------------------------hhH--HHHHH------HhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS------------------------EGF--ISNAG------SLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a------------------------~g~--ll~AA------~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.|||++ .++ +++++ ++.+..+||++||...+....
T Consensus 103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~ 170 (279)
T 3sju_A 103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVM 170 (279)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCT
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCC
Confidence 9999982 011 33333 446778999999987765443
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=8.9e-13 Score=109.40 Aligned_cols=91 Identities=10% Similarity=0.133 Sum_probs=74.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC----CcEEEEcC---
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG----VRSIICPS--- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G----vDaVIh~a--- 171 (209)
|++||||||+|+||++++++|+++|++|+++.|++++... + +.+|++|+++++++++. +|+|||++
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG 73 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 4689999999999999999999999999999998865432 1 67899999999999864 49999982
Q ss_pred h--------------hH--HHHH----HHhCCCCEEEEecccccc
Q 028418 172 E--------------GF--ISNA----GSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 172 ~--------------g~--ll~A----A~~aGVkriV~vSS~~Vy 196 (209)
. ++ ++++ +++.+..|||++||..++
T Consensus 74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 1 11 3333 346788999999999887
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.7e-12 Score=109.97 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=81.1
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh-------hcCCceEEEEccCCCHHHHHHhhc----
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
....++++|||||+|+||++++++|+++|++|.++.|+. +.... ..+..+.++.+|++|++++.++++
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 345567999999999999999999999999999999854 32211 114568999999999999998886
Q ss_pred ---CCcEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 163 ---GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 ---GvDaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++|.|||++ + ++ ++++ .++.+..+||++||...+...+
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 171 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASP 171 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCC
Confidence 789999982 0 11 3333 3667889999999987765443
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.37 E-value=4e-12 Score=106.59 Aligned_cols=74 Identities=20% Similarity=0.192 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||+|+||++++++|+++|++|.++.|+++.... ..+..+.++.+|++|++++.++++ ++|.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 346789999999999999999999999999999998876532 234568899999999999999886 8999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 85 lv~n 88 (257)
T 3tpc_A 85 LVNC 88 (257)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9998
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=4.3e-12 Score=105.78 Aligned_cols=103 Identities=13% Similarity=0.062 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcc--hhh---hc-CCceEEEEccCCCH-HHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN--AME---SF-GTYVESMAGDASNK-KFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~--a~~---~~-~~~vevv~GDl~D~-~sL~~AL~------- 162 (209)
.++++|||||+|+||++++++|+++|++ |.++.|++.. ... .. +..++++.+|++|+ +++.++++
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999997 9999998742 111 11 34688999999998 88887775
Q ss_pred CCcEEEEcC----------------hhH--HHHHHH----hCC---CCEEEEecccccccCCC
Q 028418 163 GVRSIICPS----------------EGF--ISNAGS----LKG---VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a----------------~g~--ll~AA~----~aG---VkriV~vSS~~Vyg~~~ 200 (209)
++|.|||++ .++ +++++. +.+ -.+||++||...+....
T Consensus 84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 146 (254)
T 1sby_A 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH 146 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT
T ss_pred CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC
Confidence 799999982 011 344432 222 46899999988775543
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.37 E-value=2e-12 Score=109.95 Aligned_cols=104 Identities=15% Similarity=0.166 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCC---ceEEEEccCCCHHHHHHhhc-----
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~---~vevv~GDl~D~~sL~~AL~----- 162 (209)
...+++|||||+|+||++++++|+++|++|.++.|++++.... .+. .+.++.+|++|++++.++++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999988654321 122 68899999999999988876
Q ss_pred --CCcEEEEcC-h------------------------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 163 --GVRSIICPS-E------------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 --GvDaVIh~a-~------------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|.|||++ . ++ ++++ .++.+-.+||++||...+....
T Consensus 89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 159 (281)
T 3svt_A 89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR 159 (281)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC
Confidence 679999982 0 11 2333 3445667999999988765543
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=2.1e-12 Score=108.34 Aligned_cols=105 Identities=18% Similarity=0.270 Sum_probs=82.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
....+++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ ++|
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 3456899999999999999999999999999999998865432 235678999999999999998886 799
Q ss_pred EEEEcC-------------h-----------hH--HHH----HHHhCC-CCEEEEecccccccCCC
Q 028418 166 SIICPS-------------E-----------GF--ISN----AGSLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a-------------~-----------g~--ll~----AA~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
.|||++ + ++ +.+ .+++.+ ..+||++||...+...+
T Consensus 83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 148 (247)
T 3rwb_A 83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP 148 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC
Confidence 999982 0 11 233 355555 68999999987654443
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.37 E-value=2e-12 Score=108.47 Aligned_cols=104 Identities=18% Similarity=0.218 Sum_probs=81.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
....+++|||||+|+||++++++|+++|++|.++.|+.+.... .....+..+++|++|++++.++++ ++|
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 3456799999999999999999999999999999998865432 234457889999999999998886 899
Q ss_pred EEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 166 SIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 166 aVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
.|||++ + ++ ++++ +++.+..+||++||...+...
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~ 149 (248)
T 3op4_A 86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN 149 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC
Confidence 999982 0 11 2333 345678899999997665433
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.8e-12 Score=106.28 Aligned_cols=102 Identities=14% Similarity=0.140 Sum_probs=79.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||+|+||++++++|+++|++|.++.|++++... ..+..++++.+|++|++++.++++ .+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 46799999999999999999999999999999998865432 124568999999999999988875 57
Q ss_pred cEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 165 RSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
|.|||++ + ++ ++++ .++.+..+||++||...+...
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 148 (247)
T 3lyl_A 84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN 148 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC
Confidence 9999982 0 11 2333 345677899999998765443
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.3e-12 Score=109.58 Aligned_cols=102 Identities=10% Similarity=0.147 Sum_probs=79.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCC---ceEEEEccCCCHHHHHHhhc-----
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~---~vevv~GDl~D~~sL~~AL~----- 162 (209)
..++++|||||+|+||++++++|+++|++|.++.|++++.... .+. .+.++.+|++|++++.++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 3467999999999999999999999999999999987654321 122 68899999999999988876
Q ss_pred --CCcEEEEcC------h----------------------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 163 --GVRSIICPS------E----------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 --GvDaVIh~a------~----------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
++|.|||++ . ++ ++++ .++.+ .+||++||...+...
T Consensus 84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~ 155 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA 155 (280)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC
T ss_pred cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC
Confidence 789999982 1 00 2233 33445 899999998876544
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.3e-12 Score=108.22 Aligned_cols=107 Identities=16% Similarity=0.170 Sum_probs=82.7
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc----
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
+-....+++|||||+|+||++++++|+++|++|.++.|+.++.... .+..+.++++|++|++++.++++
T Consensus 15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3456678999999999999999999999999999999987654321 35678999999999999888876
Q ss_pred ---CCcEEEEcC-------------h-----------hH--HHHH----HHhCC-CCEEEEecccccccCCC
Q 028418 163 ---GVRSIICPS-------------E-----------GF--ISNA----GSLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 ---GvDaVIh~a-------------~-----------g~--ll~A----A~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
++|.|||++ + ++ ++++ .++.+ -.+||++||...+....
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 166 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP 166 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC
Confidence 799999982 0 11 2333 33434 56999999988765543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=2e-12 Score=109.35 Aligned_cols=103 Identities=15% Similarity=0.210 Sum_probs=79.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+|+||++++++|+++|++|.++ .|+.+.... ..+..+.++.+|++|++++.++++ .
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999999997 676654321 124568999999999999988875 5
Q ss_pred CcEEEEcC-------------h-----------hH--HHH----HHHhCCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS-------------E-----------GF--ISN----AGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~----AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|.|||++ + ++ +++ .+++.+..+||++||...+....
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~ 149 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLE 149 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCT
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCC
Confidence 69999982 0 11 233 34667788999999988765543
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.6e-12 Score=109.06 Aligned_cols=102 Identities=11% Similarity=0.124 Sum_probs=80.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
++++|||||+|+||++++++|+++|++|.++.|+.++.... .+..+.++.+|++|++++.++++ .+|
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 83 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRID 83 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999999999999999987654321 24568899999999999988875 789
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.|||++ + ++ ++..+++.+..+||++||...+....
T Consensus 84 ~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~ 148 (264)
T 3tfo_A 84 VLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVP 148 (264)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCC
Confidence 999982 0 11 23344566789999999988765543
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=4e-12 Score=106.34 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+|+||++++++|+++|++|.++.|+...... ..+..+.++.+|++|++++.++++ .
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999887644221 123468999999999999999886 8
Q ss_pred CcEEEEcCh--------------------------hH--HHHHH----HhCCCCEEEEecccccc
Q 028418 164 VRSIICPSE--------------------------GF--ISNAG----SLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a~--------------------------g~--ll~AA----~~aGVkriV~vSS~~Vy 196 (209)
+|.|||++- ++ +++++ ++.+..+||++||.+++
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~ 150 (264)
T 3i4f_A 86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGAD 150 (264)
T ss_dssp CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGG
T ss_pred CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhc
Confidence 899999820 11 33443 67788999999998655
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=3.4e-12 Score=107.62 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe-CCcchhhh---c----CCceEEEEccCCCH----HHHHHhhc---
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES---F----GTYVESMAGDASNK----KFLKTALR--- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR-~~~~a~~~---~----~~~vevv~GDl~D~----~sL~~AL~--- 162 (209)
..+++|||||+|+||++++++|+++|++|+++.| ++++.... . +..+.++.+|++|+ +++.++++
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999 66543221 1 45689999999999 88888876
Q ss_pred ----CCcEEEEc
Q 028418 163 ----GVRSIICP 170 (209)
Q Consensus 163 ----GvDaVIh~ 170 (209)
++|+|||+
T Consensus 90 ~~~g~id~lv~n 101 (276)
T 1mxh_A 90 RAFGRCDVLVNN 101 (276)
T ss_dssp HHHSCCCEEEEC
T ss_pred HhcCCCCEEEEC
Confidence 79999998
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.36 E-value=5.8e-12 Score=108.20 Aligned_cols=101 Identities=18% Similarity=0.270 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..++++|||||+|+||++++++|+++|++|.++.|+.++.... .+..+.++++|++|++++.++++ +
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4567899999999999999999999999999999988654321 23568899999999999988876 7
Q ss_pred CcEEEEcC----h---------------------hH--HHHHH----HhCCCCEEEEeccccccc
Q 028418 164 VRSIICPS----E---------------------GF--ISNAG----SLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 164 vDaVIh~a----~---------------------g~--ll~AA----~~aGVkriV~vSS~~Vyg 197 (209)
+|.|||++ . ++ +++++ ++.+..+||++||...+.
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~ 170 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTR 170 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhcc
Confidence 89999982 0 11 33343 667889999999987654
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.3e-12 Score=108.64 Aligned_cols=107 Identities=11% Similarity=0.104 Sum_probs=80.7
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
|....++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ +
T Consensus 23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGR 102 (272)
T ss_dssp -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 334557789999999999999999999999999999998765432 234578999999999999998886 8
Q ss_pred CcEEEEcC----h---------------------hH------HHHHHHhCC--CCEEEEecccccccCCC
Q 028418 164 VRSIICPS----E---------------------GF------ISNAGSLKG--VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a----~---------------------g~------ll~AA~~aG--VkriV~vSS~~Vyg~~~ 200 (209)
+|.|||++ . ++ ++...++.+ -.+||++||...+...+
T Consensus 103 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~ 172 (272)
T 4dyv_A 103 VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP 172 (272)
T ss_dssp CCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC
Confidence 99999982 0 11 223344444 57999999987765543
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.4e-12 Score=107.33 Aligned_cols=104 Identities=15% Similarity=0.179 Sum_probs=81.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------c-CCceEEEEccCCCHHHHHHhhc---CCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR---GVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~-~~~vevv~GDl~D~~sL~~AL~---GvD 165 (209)
...+++|||||+|+||++++++|+++|++|.++.|+.+..... . +..+.++.+|++|++.+.++++ .+|
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 4467899999999999999999999999999999987654321 1 2457889999999999988876 789
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+||++ + ++ ++..+++.+..+||++||...+....
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 152 (267)
T 3t4x_A 88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQ 152 (267)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCT
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCC
Confidence 999982 0 11 24445667889999999988765543
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.3e-12 Score=106.42 Aligned_cols=73 Identities=18% Similarity=0.256 Sum_probs=64.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc------CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~------GvDaVIh~ 170 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.+......+..++++.+|++|++++.++++ .+|.|||+
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n 86 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC 86 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence 46789999999999999999999999999999998776655566779999999999999998887 89999998
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.6e-12 Score=108.72 Aligned_cols=104 Identities=18% Similarity=0.159 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ ++|.
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 456799999999999999999999999999999998765432 235678999999999999988876 7899
Q ss_pred EEEcC-------------h-----------hH--HH----HHHHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|||++ + ++ ++ ...++.+..+||++||...+...+
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~ 170 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVG 170 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC
Confidence 99982 0 11 22 334557788999999987765443
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=3.6e-12 Score=110.23 Aligned_cols=103 Identities=8% Similarity=0.125 Sum_probs=80.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCC---ceEEEEccCCCHHHHHHhhc----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~---~vevv~GDl~D~~sL~~AL~---- 162 (209)
...++++|||||+|+||++++++|+++|++|+++.|++++.... .+. .+.++.+|++|++++.++++
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999987654321 122 68899999999999998876
Q ss_pred ---CCcEEEEcC------h--------------------hH--H----HHHHHhCCCCEEEEecccccccCC
Q 028418 163 ---GVRSIICPS------E--------------------GF--I----SNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 ---GvDaVIh~a------~--------------------g~--l----l~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++|.|||++ . ++ + +...++.+ .+||++||...+...
T Consensus 103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~ 173 (297)
T 1xhl_A 103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA 173 (297)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC
T ss_pred hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC
Confidence 799999972 0 00 2 23334556 899999998776543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.35 E-value=2.4e-12 Score=110.00 Aligned_cols=104 Identities=16% Similarity=0.179 Sum_probs=82.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...++++|||||+|+||++++++|+++|++|.++.|++++... ..+..++++.+|++|++++.++++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 4567899999999999999999999999999999998765432 124568999999999999999886
Q ss_pred CCcEEEEcC-------------h-----------hH--H----HHHHHhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++|.|||++ + ++ + +..+++.+..+||++||...+...
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~ 169 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR 169 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC
Confidence 799999982 0 11 2 333455677899999998765443
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=3.5e-12 Score=108.53 Aligned_cols=104 Identities=14% Similarity=0.217 Sum_probs=79.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cC-CceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~-~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++||||||+|+||++++++|+++|++|++++|++++.... .+ ..++++.+|++|++++.++++
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4567999999999999999999999999999999987654321 12 358899999999999988876
Q ss_pred CCcEEEEc-C------------h-----------hH--HHHHHHh---CCCCEEEEecccccccCCC
Q 028418 163 GVRSIICP-S------------E-----------GF--ISNAGSL---KGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~-a------------~-----------g~--ll~AA~~---aGVkriV~vSS~~Vyg~~~ 200 (209)
++|.|||+ + . ++ +++++.. .+..+||++||...+...+
T Consensus 106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~ 172 (286)
T 1xu9_A 106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP 172 (286)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT
T ss_pred CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC
Confidence 79999987 2 0 11 2333321 1347999999987765443
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=7.6e-12 Score=102.90 Aligned_cols=72 Identities=13% Similarity=0.106 Sum_probs=63.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ ++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999999998765432 234578999999999999999887 78
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.|||+
T Consensus 82 d~li~~ 87 (235)
T 3l77_A 82 DVVVAN 87 (235)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999998
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.5e-12 Score=110.09 Aligned_cols=100 Identities=12% Similarity=0.144 Sum_probs=79.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhcCC-------cEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGV-------RSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~Gv-------DaV 167 (209)
+++|||||+|+||++++++|+++|++|.++.|++++.... .. ..+.++.+|++|++++.++++.+ |.|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 6899999999999999999999999999999987654321 11 26889999999999999998754 999
Q ss_pred EEcC----h---------------------hH------HHHHHHhCCCC-EEEEecccccccCC
Q 028418 168 ICPS----E---------------------GF------ISNAGSLKGVQ-HVILLSQRQRWHSS 199 (209)
Q Consensus 168 Ih~a----~---------------------g~------ll~AA~~aGVk-riV~vSS~~Vyg~~ 199 (209)
||++ . ++ ++..+++.+.. +||++||...+...
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~ 165 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY 165 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC
Confidence 9982 0 11 23445566778 99999998776544
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.34 E-value=4.7e-12 Score=107.14 Aligned_cols=103 Identities=15% Similarity=0.116 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++||||||+|+||++++++|+++|++|.++.|+..... ...+..+.++.+|++|++++.++++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 106 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG 106 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 44678999999999999999999999999999999654321 1224568999999999999998886
Q ss_pred CCcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++|.|||++ + ++ ++...++.+..+||++||...+...
T Consensus 107 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 173 (271)
T 4iin_A 107 GLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN 173 (271)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC
Confidence 799999982 0 11 2333456688999999997765443
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.34 E-value=3.8e-12 Score=106.25 Aligned_cols=72 Identities=13% Similarity=0.233 Sum_probs=62.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ .+|.||
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 5689999999999999999999999999999998865432 223468999999999999988876 679999
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
|+
T Consensus 83 nn 84 (235)
T 3l6e_A 83 HC 84 (235)
T ss_dssp EE
T ss_pred EC
Confidence 98
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.34 E-value=7.2e-12 Score=105.81 Aligned_cols=103 Identities=12% Similarity=0.115 Sum_probs=80.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++++|++|++++.++++ .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 456799999999999999999999999999999998765432 124568999999999999988876 7
Q ss_pred CcEEEEcC--------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS--------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a--------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|.|||++ + ++ ++++ .++.+ .+||++||...+....
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~ 155 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQA 155 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCT
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCC
Confidence 89999982 0 11 2333 33445 7999999988765544
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=4.9e-12 Score=117.70 Aligned_cols=99 Identities=17% Similarity=0.290 Sum_probs=80.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcch---h------hhcCCceEEEEccCCCHHHHHHhhcCC--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNA---M------ESFGTYVESMAGDASNKKFLKTALRGV-- 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a---~------~~~~~~vevv~GDl~D~~sL~~AL~Gv-- 164 (209)
.+.++||||||||+||+++++.|+++|++ |+++.|+.... . ...+..++++.+|++|++++.++++.+
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~ 303 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD 303 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 45679999999999999999999999996 88888986421 1 123456899999999999999999876
Q ss_pred ----cEEEEcC----h--------------------hH--HHHHHHhCCCCEEEEeccccc
Q 028418 165 ----RSIICPS----E--------------------GF--ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 165 ----DaVIh~a----~--------------------g~--ll~AA~~aGVkriV~vSS~~V 195 (209)
|.|||++ . |+ +.+++...+.++||++||...
T Consensus 304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~ 364 (486)
T 2fr1_A 304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFAS 364 (486)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHH
T ss_pred cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHh
Confidence 9999982 0 11 567788889999999999654
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.33 E-value=9.3e-12 Score=103.92 Aligned_cols=74 Identities=18% Similarity=0.217 Sum_probs=64.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++.+|++|++++.++++ .+|.
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 346799999999999999999999999999999998866532 345678999999999999998886 7899
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 87 li~~ 90 (261)
T 3n74_A 87 LVNN 90 (261)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9998
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-11 Score=103.86 Aligned_cols=107 Identities=13% Similarity=0.106 Sum_probs=81.3
Q ss_pred cccCCCCeEEEEcCCCH-HHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc---
Q 028418 94 FPEEARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR--- 162 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGf-IG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~--- 162 (209)
+.....+++|||||+|+ ||++++++|+++|++|.++.|+.++.... .+..++++.+|++|++++.++++
T Consensus 17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 34456789999999985 99999999999999999999987654321 12468999999999999998875
Q ss_pred ----CCcEEEEcC-------------h-----------hH--HHHHH----HhC-CCCEEEEecccccccCCC
Q 028418 163 ----GVRSIICPS-------------E-----------GF--ISNAG----SLK-GVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 ----GvDaVIh~a-------------~-----------g~--ll~AA----~~a-GVkriV~vSS~~Vyg~~~ 200 (209)
.+|.|||++ + ++ +++++ ++. +..+||++||...+....
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 169 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH 169 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC
Confidence 679999982 0 11 33333 333 678999999987765443
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1e-11 Score=104.18 Aligned_cols=104 Identities=10% Similarity=0.101 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccC--CCHHHHHHhhc-----
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR----- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl--~D~~sL~~AL~----- 162 (209)
...+++|||||+|+||++++++|+++|++|.++.|+.++.... .+..+.++.+|+ +|++.+.++++
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 4567999999999999999999999999999999987654321 123678999999 99998888775
Q ss_pred --CCcEEEEcC--------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 163 --GVRSIICPS--------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 --GvDaVIh~a--------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|.|||++ + ++ ++++ .++.+..+||++||...+....
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~ 160 (252)
T 3f1l_A 90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA 160 (252)
T ss_dssp CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCT
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCC
Confidence 789999982 0 11 3333 3667889999999987665443
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=7.7e-12 Score=106.50 Aligned_cols=103 Identities=15% Similarity=0.151 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hh------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...+++|||||+|+||++++++|+++|++|.++.|+... .. ...+..+.++.+|++|++++.++++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG 105 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 446789999999999999999999999999999985432 21 1224568899999999999998886
Q ss_pred CCcEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|.|||++ + ++ ++++ +++.+..+||++||...+...
T Consensus 106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 172 (269)
T 4dmm_A 106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN 172 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC
Confidence 789999982 0 11 2333 355678899999997765433
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.8e-11 Score=104.16 Aligned_cols=101 Identities=12% Similarity=0.149 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------------hcCCceEEEEccCCCHHHHHHhhc-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------------SFGTYVESMAGDASNKKFLKTALR- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------------~~~~~vevv~GDl~D~~sL~~AL~- 162 (209)
...+++|||||+|.||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 83 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA 83 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 346799999999999999999999999999999998764211 124568899999999999988875
Q ss_pred ------CCcEEEEcC-------------h-----------hH--H----HHHHHhCCCCEEEEeccccccc
Q 028418 163 ------GVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 163 ------GvDaVIh~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~Vyg 197 (209)
.+|.|||++ + ++ + +..+++.+..+||++||...+.
T Consensus 84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~ 154 (274)
T 3e03_A 84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLN 154 (274)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCC
T ss_pred HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcC
Confidence 789999982 0 11 2 3334566788999999987654
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.6e-11 Score=105.61 Aligned_cols=105 Identities=18% Similarity=0.272 Sum_probs=81.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
....+++|||||+|+||++++++|+++|++|.++.|+.+... ...+..+.++.+|++|++++.++++
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 445789999999999999999999999999999999875321 1234568999999999999988876
Q ss_pred -CCcEEEEcC-----h--------------------hH--HHHHHHhC--CCCEEEEecccccccCCC
Q 028418 163 -GVRSIICPS-----E--------------------GF--ISNAGSLK--GVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 -GvDaVIh~a-----~--------------------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~ 200 (209)
.+|.|||++ . ++ +++++... .-.+||++||...+....
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~ 191 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE 191 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC
Confidence 789999982 0 11 45555432 335999999987765443
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=4.9e-12 Score=107.39 Aligned_cols=99 Identities=14% Similarity=0.192 Sum_probs=77.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
.++++|||||+|+||++++++|+++|++|+++.|++++... .....+.++.+|++|++++.++++ .+|.|
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 84 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 84 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 45789999999999999999999999999999998765432 223468899999999999988876 46999
Q ss_pred EEcC----h--------------------hH--HHHHHHhC--CCCEEEEecccccc
Q 028418 168 ICPS----E--------------------GF--ISNAGSLK--GVQHVILLSQRQRW 196 (209)
Q Consensus 168 Ih~a----~--------------------g~--ll~AA~~a--GVkriV~vSS~~Vy 196 (209)
||++ . ++ +++++... ...+||++||...+
T Consensus 85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~ 141 (263)
T 2a4k_A 85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL 141 (263)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc
Confidence 9982 0 11 34444332 14699999998876
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.32 E-value=6.4e-12 Score=106.20 Aligned_cols=103 Identities=11% Similarity=0.142 Sum_probs=78.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hh------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..++++|||||+|+||++++++|+++|++|.++.|+... .. ...+..+.++.+|++|++++.++++
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 345689999999999999999999999999999855432 21 1124568999999999999998886
Q ss_pred CCcEEEEcC-------------h-----------hH--HH----HHHHhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS-------------E-----------GF--IS----NAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a-------------~-----------g~--ll----~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|.|||++ + +. ++ ...++.+..+||++||...+...
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 169 (269)
T 3gk3_A 103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA 169 (269)
T ss_dssp CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC
Confidence 799999982 0 11 22 33445677899999997665443
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=3.6e-12 Score=107.52 Aligned_cols=75 Identities=16% Similarity=0.135 Sum_probs=60.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCH-HHHHHhhc-----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNK-KFLKTALR----- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~-~sL~~AL~----- 162 (209)
...+++||||||+|+||++++++|+++|++|++++|+.++... ..+..++++.+|++|+ +++.++++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 3456799999999999999999999999999999998865422 1124689999999998 77766654
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
++|.|||+
T Consensus 89 ~g~iD~lv~n 98 (311)
T 3o26_A 89 FGKLDILVNN 98 (311)
T ss_dssp HSSCCEEEEC
T ss_pred CCCCCEEEEC
Confidence 89999998
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.2e-11 Score=105.89 Aligned_cols=103 Identities=13% Similarity=0.098 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------Gv 164 (209)
..++++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++.+.++++ ++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 4567999999999999999999999999999999988764321 24568999999999999988876 78
Q ss_pred cEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 165 RSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 165 DaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
|.|||++ + ++ ++++ .++.+..+||++||...+...
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~ 175 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPK 175 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC
Confidence 9999982 0 11 2333 356678899999998876543
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.32 E-value=9.4e-12 Score=106.54 Aligned_cols=75 Identities=15% Similarity=0.269 Sum_probs=65.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
....+++|||||+|+||++++++|+++|++|.++.|+.+..... .+..+.++++|++|++++.++++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45568999999999999999999999999999999988664321 23468899999999999999887
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|.|||+
T Consensus 109 ~iD~lvnn 116 (276)
T 3r1i_A 109 GIDIAVCN 116 (276)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 89999998
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=6.3e-12 Score=107.07 Aligned_cols=103 Identities=11% Similarity=0.082 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 456799999999999999999999999999999998765321 124568999999999999988876
Q ss_pred CCcEEEEcC-------------h-----------hH--HHHHH----HhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a-------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|.|||++ + ++ +++++ ++.+..+||++||...+...
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 171 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ 171 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC
Confidence 789999982 0 11 33333 44567899999998765443
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=1.9e-11 Score=104.46 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-----hhcCCceEEEEccCCCHHHHHHhhc------CCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR------GVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-----~~~~~~vevv~GDl~D~~sL~~AL~------GvD 165 (209)
...+++|||||+|+||++++++|+++|++|.++.|+..... ...+..++++.+|++|++++.++.+ ++|
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD 108 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD 108 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence 45679999999999999999999999999999997653211 1124568899999999999887754 799
Q ss_pred EEEEcC------------------------hhH--HHH----HHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS------------------------EGF--ISN----AGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a------------------------~g~--ll~----AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.|||++ .++ +++ .+++.+..+||++||...+....
T Consensus 109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~ 173 (273)
T 3uf0_A 109 VLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR 173 (273)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS
T ss_pred EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC
Confidence 999982 011 233 33567889999999988765543
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=1e-11 Score=102.63 Aligned_cols=105 Identities=10% Similarity=0.043 Sum_probs=80.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccC--CCHHHHHHhhc----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR---- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl--~D~~sL~~AL~---- 162 (209)
...++++|||||+|+||++++++|+++|++|.++.|++++.... ....+.++..|+ +|++++.++++
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999987654321 124577888888 99998887765
Q ss_pred ---CCcEEEEcC--------------h-----------hH--HHHHH----HhCCCCEEEEecccccccCCC
Q 028418 163 ---GVRSIICPS--------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 ---GvDaVIh~a--------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++|.|||++ + ++ +++++ ++.+..+||++||...+....
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 162 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRA 162 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCT
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCC
Confidence 789999982 0 11 33343 667788999999987665443
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.32 E-value=6e-12 Score=108.16 Aligned_cols=100 Identities=15% Similarity=0.162 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||+|+||++++++|+++|++|.++.|+.++.... .+..+.++.+|++|++++.++++ +
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4567999999999999999999999999999999987654321 24568899999999999998876 7
Q ss_pred CcEEEEcC----h---------------------hH--H----HHHHHhCCCCEEEEecccccc
Q 028418 164 VRSIICPS----E---------------------GF--I----SNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 164 vDaVIh~a----~---------------------g~--l----l~AA~~aGVkriV~vSS~~Vy 196 (209)
+|.|||++ . ++ + +...++.+-.+||++||...+
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 149 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGH 149 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTT
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhC
Confidence 89999982 0 11 2 233456677899999998776
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=1.8e-11 Score=104.07 Aligned_cols=106 Identities=13% Similarity=0.114 Sum_probs=79.8
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC-------------Ccchh------hhcCCceEEEEccCCCHHH
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------KRNAM------ESFGTYVESMAGDASNKKF 156 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~-------------~~~a~------~~~~~~vevv~GDl~D~~s 156 (209)
....+++|||||+|+||++++++|+++|++|.++.|+ .++.. ...+..+.++++|++|+++
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 4567899999999999999999999999999999984 22211 1124568899999999999
Q ss_pred HHHhhc-------CCcEEEEcC-------------h-----------hH--HHHH----HHhCC-CCEEEEecccccccC
Q 028418 157 LKTALR-------GVRSIICPS-------------E-----------GF--ISNA----GSLKG-VQHVILLSQRQRWHS 198 (209)
Q Consensus 157 L~~AL~-------GvDaVIh~a-------------~-----------g~--ll~A----A~~aG-VkriV~vSS~~Vyg~ 198 (209)
+.++++ ++|.|||++ + ++ ++++ .++.+ -.+||++||...+..
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA 171 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence 998876 789999982 0 11 2333 34444 679999999887655
Q ss_pred CCC
Q 028418 199 SSN 201 (209)
Q Consensus 199 ~~~ 201 (209)
.++
T Consensus 172 ~~~ 174 (280)
T 3pgx_A 172 TPG 174 (280)
T ss_dssp CTT
T ss_pred CCC
Confidence 443
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.1e-11 Score=103.08 Aligned_cols=103 Identities=15% Similarity=0.217 Sum_probs=78.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc------------chh------hhcCCceEEEEccCCCHHHH
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------------NAM------ESFGTYVESMAGDASNKKFL 157 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~------------~a~------~~~~~~vevv~GDl~D~~sL 157 (209)
....+++|||||+|+||++++++|+++|++|.++.|+.. ... ...+..+.++.+|++|++++
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 345679999999999999999999999999999998732 111 12245689999999999999
Q ss_pred HHhhc-------CCcEEEEcC---------h-----------hH--HHHH----HHhCC-CCEEEEecccccccC
Q 028418 158 KTALR-------GVRSIICPS---------E-----------GF--ISNA----GSLKG-VQHVILLSQRQRWHS 198 (209)
Q Consensus 158 ~~AL~-------GvDaVIh~a---------~-----------g~--ll~A----A~~aG-VkriV~vSS~~Vyg~ 198 (209)
.++++ ++|.|||++ + ++ ++++ .++.+ -.+||++||...+..
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 164 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG 164 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCC
Confidence 99886 799999982 0 11 3333 33333 579999999876543
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.5e-11 Score=105.22 Aligned_cols=76 Identities=16% Similarity=0.204 Sum_probs=62.8
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchh------hhcCCceEEEEccCCCHHHHHHhhc-----
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM------ESFGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~------~~~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
....++++|||||+|+||++++++|+++|++|.++.|+. +... ...+..+.++++|++|++++.++++
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 345567899999999999999999999999999999643 3322 1124568999999999999998886
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
++|.|||+
T Consensus 105 ~g~iD~lvnn 114 (280)
T 4da9_A 105 FGRIDCLVNN 114 (280)
T ss_dssp HSCCCEEEEE
T ss_pred cCCCCEEEEC
Confidence 88999998
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=1e-11 Score=104.24 Aligned_cols=101 Identities=12% Similarity=0.137 Sum_probs=78.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------cCCceEEEEccCCCHHHHHHhhc--------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~~~~vevv~GDl~D~~sL~~AL~--------G 163 (209)
..+++|||||+|+||++++++|+++|++|.++.|++++.... .+..+.++.+|++|++++.++++ .
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 457899999999999999999999999999999987654321 14468899999999998887764 4
Q ss_pred CcEEEEcC---h----------------------------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 164 VRSIICPS---E----------------------------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 164 vDaVIh~a---~----------------------------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+|.|||++ . ++ ++..+++.+..+||++||...+..
T Consensus 84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 155 (260)
T 2qq5_A 84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY 155 (260)
T ss_dssp CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC
T ss_pred ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC
Confidence 69999974 0 01 123344667899999999877653
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.31 E-value=9.9e-12 Score=106.46 Aligned_cols=102 Identities=16% Similarity=0.260 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------------hhcCCceEEEEccCCCHHHHHHhhc-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------------~~~~~~vevv~GDl~D~~sL~~AL~- 162 (209)
...+++|||||+|+||++++++|+++|++|.++.|+.++.. ...+..+.++++|++|++++.++++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 34679999999999999999999999999999999876321 1124568999999999999998886
Q ss_pred ------CCcEEEEcC-------------h-----------hH--HHHHH----HhCCCCEEEEecccccccC
Q 028418 163 ------GVRSIICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 ------GvDaVIh~a-------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg~ 198 (209)
.+|.+||++ + ++ +++++ ++.+..+||++||...+..
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 158 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP 158 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC
Confidence 899999982 0 11 33433 3447789999999766543
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.31 E-value=8.2e-12 Score=106.60 Aligned_cols=103 Identities=10% Similarity=0.119 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..++++|||||+|+||++++++|+++|++|.++.|+.+.... ..+..+.++.+|++|++++.++++ .
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 456799999999999999999999999999999998765432 124567899999999999998886 7
Q ss_pred CcEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|.|||++ + ++ ++++ .++.+-.+||++||...+...
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 171 (270)
T 3ftp_A 106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN 171 (270)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC
Confidence 89999982 0 11 2333 345567899999997765443
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=2.1e-11 Score=103.06 Aligned_cols=105 Identities=11% Similarity=0.103 Sum_probs=80.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cC-CceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~-~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...+++|||||+|+||++++++|+++|++|.++.|++++.... .+ ..+.++.+|++|++++.++++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4567999999999999999999999999999999987654321 22 248899999999999888775
Q ss_pred -CCcEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCCCC
Q 028418 163 -GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 -GvDaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+|.|||++ + ++ ++++ .++.+-.+||++||...+...++
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 155 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPH 155 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCC
Confidence 689999982 0 11 2333 35567789999999877655443
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1e-11 Score=104.73 Aligned_cols=106 Identities=10% Similarity=0.115 Sum_probs=81.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
....+++|||||+|+||++++++|+++|++|.++.|++++... ..+..+.++.+|++|++++.++++ .+|
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3456899999999999999999999999999999998865432 234568999999999999887764 789
Q ss_pred EEEEcC-------------h-----------hH--HHHHHHhC--CCCEEEEecccccccCCCC
Q 028418 166 SIICPS-------------E-----------GF--ISNAGSLK--GVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 166 aVIh~a-------------~-----------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~~ 201 (209)
.+||++ + ++ +++++... .-.+||++||...+...++
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 148 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG 148 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC
Confidence 999982 0 11 34444321 1258999999887765443
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=8.9e-12 Score=103.51 Aligned_cols=99 Identities=11% Similarity=0.100 Sum_probs=76.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc---------CCcEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSII 168 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~---------GvDaVI 168 (209)
.++++|||||+|+||++++++|+++|++|.++.|++++.. ....++.+|++|++++.++++ ++|.||
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv 81 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL 81 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 4578999999999999999999999999999999886543 235778999999999988875 689999
Q ss_pred EcC---------h----------------hH--HHHHHHhC--CCCEEEEecccccccCCC
Q 028418 169 CPS---------E----------------GF--ISNAGSLK--GVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 169 h~a---------~----------------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~ 200 (209)
|++ . ++ +++++... .-.+||++||...+...+
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 142 (241)
T 1dhr_A 82 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP 142 (241)
T ss_dssp ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT
T ss_pred EcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC
Confidence 982 1 01 33444321 126999999988765443
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=7.7e-12 Score=106.36 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=62.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
.++++|||||+|+||++++++|+++|++|.++.|++++..... -..+.++.+|++|++++.++++ ++|.||
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 87 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 87 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4679999999999999999999999999999999876543211 1247899999999999998876 789999
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
|+
T Consensus 88 ~n 89 (270)
T 1yde_A 88 NN 89 (270)
T ss_dssp EC
T ss_pred EC
Confidence 98
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.30 E-value=8.4e-12 Score=105.02 Aligned_cols=101 Identities=12% Similarity=0.161 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--------C-CceEEEEccCCCHHHHHHhhc-----
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------G-TYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--------~-~~vevv~GDl~D~~sL~~AL~----- 162 (209)
..++++|||||+|+||++++++|+++|++|.++.|+.++..... + ..+.++.+|++|++++.++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 34679999999999999999999999999999999886543211 2 568899999999999988875
Q ss_pred --CCcEEEEcC------------h-----------hH--HHHH----HHhCCCCEEEEeccccccc
Q 028418 163 --GVRSIICPS------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 163 --GvDaVIh~a------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg 197 (209)
.+|.|||++ + ++ ++++ .++.+..+||++||...+.
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 150 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY 150 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC
Confidence 689999982 0 11 2333 3556788999999977654
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.29 E-value=7.3e-12 Score=103.53 Aligned_cols=97 Identities=9% Similarity=0.100 Sum_probs=75.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc---------CCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~---------GvDaVIh 169 (209)
++++|||||+|+||++++++|+++|++|.++.|++++.. ..+.++.+|++|++++.++++ ++|.|||
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 78 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 468999999999999999999999999999999887643 235778999999999988875 7899999
Q ss_pred cC---------hh----------------H--HHHHHHhC--CCCEEEEecccccccCC
Q 028418 170 PS---------EG----------------F--ISNAGSLK--GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a---------~g----------------~--ll~AA~~a--GVkriV~vSS~~Vyg~~ 199 (209)
++ .. + +++++... .-.+||++||...+...
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~ 137 (236)
T 1ooe_A 79 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT 137 (236)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC
T ss_pred CCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC
Confidence 82 10 0 23444331 12599999998876543
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.4e-11 Score=107.32 Aligned_cols=103 Identities=18% Similarity=0.227 Sum_probs=81.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------------hhcCCceEEEEccCCCHHHHHHhhc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------------ESFGTYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------------~~~~~~vevv~GDl~D~~sL~~AL~ 162 (209)
...++++|||||+|.||++++++|+++|++|.++.|+.++.. ...+..+.++.+|++|++++.++++
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 345789999999999999999999999999999999886521 1224568899999999999998886
Q ss_pred -------CCcEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccC
Q 028418 163 -------GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 -------GvDaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~ 198 (209)
++|.|||++ + ++ ++++ .++.+..+||++||...+..
T Consensus 122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~ 194 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP 194 (346)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC
Confidence 899999982 0 11 3333 36678899999999876644
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.28 E-value=1.4e-11 Score=108.27 Aligned_cols=101 Identities=19% Similarity=0.223 Sum_probs=78.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hh---------cCCceEEEEccCCCHHHHHHhhcC---
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES---------FGTYVESMAGDASNKKFLKTALRG--- 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~---------~~~~vevv~GDl~D~~sL~~AL~G--- 163 (209)
+++||||||+|+||++++++|+++|++|.++.|+..... .. .+..++++.+|++|++++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 468999999999999999999999999999888654322 11 124689999999999999999875
Q ss_pred --CcEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEecccccccCC
Q 028418 164 --VRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 --vDaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|.|||++ + ++ ++++ +++.+..|||++||...+...
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~ 149 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL 149 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC
Confidence 89999982 0 11 2333 456788999999998776543
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.28 E-value=2.7e-11 Score=102.20 Aligned_cols=104 Identities=14% Similarity=0.120 Sum_probs=78.7
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc------------chh------hhcCCceEEEEccCCCHH
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------------NAM------ESFGTYVESMAGDASNKK 155 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~------------~a~------~~~~~~vevv~GDl~D~~ 155 (209)
|.....+++|||||+|+||++++++|+++|++|.++.|+.. ... ...+..+.++.+|++|++
T Consensus 5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA 84 (287)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence 33456789999999999999999999999999999998721 111 112456889999999999
Q ss_pred HHHHhhc-------CCcEEEEcC-----------h-----------hH--HHHHHHhC--CCCEEEEeccccccc
Q 028418 156 FLKTALR-------GVRSIICPS-----------E-----------GF--ISNAGSLK--GVQHVILLSQRQRWH 197 (209)
Q Consensus 156 sL~~AL~-------GvDaVIh~a-----------~-----------g~--ll~AA~~a--GVkriV~vSS~~Vyg 197 (209)
++.++++ .+|.|||++ + ++ +++++... +-.+||++||...+.
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~ 159 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLI 159 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcc
Confidence 9988886 799999982 0 11 44555432 346999999976653
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.28 E-value=3e-11 Score=104.09 Aligned_cols=105 Identities=20% Similarity=0.251 Sum_probs=80.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc--hh------hhcCCceEEEEccCCCHHHHHHhhc------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~--a~------~~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
..++++|||||+|+||++++++|+++|++|.+..|+... .. ...+..+.++.+|++|++++.++++
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 456799999999999999999999999999999887431 11 1234568899999999999888775
Q ss_pred -CCcEEEEcC-----h--------------------hH--HHHHHHhCCC--CEEEEecccccccCCCC
Q 028418 163 -GVRSIICPS-----E--------------------GF--ISNAGSLKGV--QHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 -GvDaVIh~a-----~--------------------g~--ll~AA~~aGV--kriV~vSS~~Vyg~~~~ 201 (209)
++|.|||++ . ++ +++++...-. .+||++||...+....+
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~ 195 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH 195 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC
Confidence 789999982 0 11 4555544333 49999999988766543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.9e-11 Score=114.80 Aligned_cols=103 Identities=17% Similarity=0.295 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcch---h------hhcCCceEEEEccCCCHHHHHHhhcC--C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNA---M------ESFGTYVESMAGDASNKKFLKTALRG--V 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a---~------~~~~~~vevv~GDl~D~~sL~~AL~G--v 164 (209)
.+.++||||||+|+||+++++.|.++|++ |+++.|+.... . ...+..++++.+|++|++++.++++. +
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l 336 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP 336 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence 45679999999999999999999999995 88888876421 1 11245688999999999999999976 9
Q ss_pred cEEEEcC----h--------------------hH--HHHHHHhC-CCCEEEEecccc-cccCC
Q 028418 165 RSIICPS----E--------------------GF--ISNAGSLK-GVQHVILLSQRQ-RWHSS 199 (209)
Q Consensus 165 DaVIh~a----~--------------------g~--ll~AA~~a-GVkriV~vSS~~-Vyg~~ 199 (209)
|.|||++ . ++ +.+++... +.++||++||.. +++..
T Consensus 337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~ 399 (511)
T 2z5l_A 337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA 399 (511)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT
T ss_pred cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC
Confidence 9999982 0 11 45566665 889999999974 45543
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.6e-11 Score=104.65 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=77.9
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
+.....+++|||||+|+||++++++|+++|++|.++.|+.+..... ..+.+|++|++.+.++++ ++|.
T Consensus 23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~ 97 (266)
T 3uxy_A 23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-----LHLPGDLREAAYADGLPGAVAAGLGRLDI 97 (266)
T ss_dssp ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-----EECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-----hccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 3345678999999999999999999999999999999987654322 345899999998887764 7899
Q ss_pred EEEcC-------------h-----------hH--HHHHH----HhCCCCEEEEecccccccCCC
Q 028418 167 IICPS-------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a-------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|||++ + ++ +++++ ++.+..+||++||...+....
T Consensus 98 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~ 161 (266)
T 3uxy_A 98 VVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGP 161 (266)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCT
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC
Confidence 99982 0 11 33443 667889999999987765443
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.9e-11 Score=105.47 Aligned_cols=104 Identities=14% Similarity=0.164 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhc---
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR--- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~--- 162 (209)
..++++|||||+|+||++++++|+++|+ +|.+..|+.++.... .+..+.++.+|++|++++.++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4567999999999999999999999988 999999987654321 14568899999999999998886
Q ss_pred ----CCcEEEEcC---h----------------------hH--HHHH----HHhCCCCEEEEecccccccCCC
Q 028418 163 ----GVRSIICPS---E----------------------GF--ISNA----GSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 ----GvDaVIh~a---~----------------------g~--ll~A----A~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++|.|||++ . ++ ++++ .++.+..+||++||...+....
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~ 183 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYP 183 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCC
Confidence 589999982 0 11 2333 3567889999999987765443
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=3.1e-11 Score=101.71 Aligned_cols=104 Identities=17% Similarity=0.205 Sum_probs=77.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh------hcCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME------SFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~------~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
....++||||||+|+||++++++|+++|++|.++.+.. ..... ..+..+.++.+|++|++++.++++
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 34567899999999999999999999999998877543 33221 124568999999999999998886
Q ss_pred -CCcEEEEcC-------------h-----------hH--HHHHH-----HhCCCCEEEEecccccccCC
Q 028418 163 -GVRSIICPS-------------E-----------GF--ISNAG-----SLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 -GvDaVIh~a-------------~-----------g~--ll~AA-----~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|.|||++ + ++ +++++ ++.+..+||++||...+...
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 171 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN 171 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC
Confidence 789999982 0 11 33443 25677899999997665433
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.9e-11 Score=102.04 Aligned_cols=100 Identities=12% Similarity=0.214 Sum_probs=76.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchh------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...+++|||||+|+||++++++|+++|++|.++.|+. +... ...+..+.++.+|++|++++.++++
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4567999999999999999999999999999985544 3222 1124568899999999999998886
Q ss_pred CCcEEEEcC--------------h-----------hH--HHHHHHhCCC--CEEEEecccccc
Q 028418 163 GVRSIICPS--------------E-----------GF--ISNAGSLKGV--QHVILLSQRQRW 196 (209)
Q Consensus 163 GvDaVIh~a--------------~-----------g~--ll~AA~~aGV--kriV~vSS~~Vy 196 (209)
++|.|||++ + ++ +++++...-. .+||++||...+
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~ 148 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGR 148 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhc
Confidence 789999982 0 11 4455544322 489999998776
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.4e-11 Score=103.31 Aligned_cols=103 Identities=11% Similarity=0.084 Sum_probs=77.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.++.... .+..+.++++|++|++++.++++ .
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999999999999999999988654321 12235899999999999988875 6
Q ss_pred CcEEEEcC----h---------------------hH------HHHHHHhCC--CCEEEEecccccccCCC
Q 028418 164 VRSIICPS----E---------------------GF------ISNAGSLKG--VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a----~---------------------g~------ll~AA~~aG--VkriV~vSS~~Vyg~~~ 200 (209)
+|.|||++ . ++ ++...++.+ -.+||++||...+....
T Consensus 112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~ 181 (281)
T 4dry_A 112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP 181 (281)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC
Confidence 79999982 0 11 233344443 57999999987765443
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.1e-11 Score=101.45 Aligned_cols=75 Identities=11% Similarity=0.190 Sum_probs=64.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc------CCcE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR------GVRS 166 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~------GvDa 166 (209)
...++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ ++|.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence 3456789999999999999999999999999999998865432 335678999999999999998886 6799
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
|||+
T Consensus 107 lv~~ 110 (281)
T 3ppi_A 107 AVVA 110 (281)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9987
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-11 Score=103.03 Aligned_cols=73 Identities=19% Similarity=0.219 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.+++||||||+|+||++++++|+++|++|.++. |+.+.... ..+..+.++.+|++|++++.++++ .
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 104 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR 104 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 356899999999999999999999999998874 55443321 124568999999999999988876 7
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.|||+
T Consensus 105 id~li~n 111 (272)
T 4e3z_A 105 LDGLVNN 111 (272)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 8999998
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.24 E-value=6.9e-11 Score=100.10 Aligned_cols=99 Identities=14% Similarity=0.154 Sum_probs=76.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h------hhcCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~------~~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...++++|||||+|+||++++++|+++|++|.++.|+.... . ...+..+.++.+|++|++++.++++
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45578999999999999999999999999999988765332 1 1234668999999999999998886
Q ss_pred -CCcEEEEcC-------------h-----------hH--HHHHHHhCCC--CEEEEecccc
Q 028418 163 -GVRSIICPS-------------E-----------GF--ISNAGSLKGV--QHVILLSQRQ 194 (209)
Q Consensus 163 -GvDaVIh~a-------------~-----------g~--ll~AA~~aGV--kriV~vSS~~ 194 (209)
.+|.|||++ + ++ +++++...-. .+||++||..
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 789999982 0 11 3455544333 4999999976
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.24 E-value=8e-11 Score=100.50 Aligned_cols=74 Identities=19% Similarity=0.304 Sum_probs=62.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hh------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...+++|||||+|+||++++++|+++|++|.++.|+... .. ...+..+.++.+|++|++++.++++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 446799999999999999999999999999999776532 21 1124568899999999999998886
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|.|||+
T Consensus 109 ~iD~lvnn 116 (271)
T 3v2g_A 109 GLDILVNS 116 (271)
T ss_dssp CCCEEEEC
T ss_pred CCcEEEEC
Confidence 89999998
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.6e-11 Score=102.00 Aligned_cols=102 Identities=11% Similarity=0.083 Sum_probs=76.5
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCc---chhhh--cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~---~a~~~--~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+ |+||++++++|+++|++|+++.|+++ ..... ....+.++.+|++|++++.++++ +
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999 99999999999999999999999874 11111 11237899999999999998886 7
Q ss_pred CcEEEEcC----h----h--------------------H--HHHHHHhC--CCCEEEEecccccccCC
Q 028418 164 VRSIICPS----E----G--------------------F--ISNAGSLK--GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a----~----g--------------------~--ll~AA~~a--GVkriV~vSS~~Vyg~~ 199 (209)
+|.|||++ . + + +++++... .-.+||++||...+...
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~ 154 (261)
T 2wyu_A 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV 154 (261)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC
T ss_pred CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC
Confidence 89999982 1 0 0 34455433 12599999998776543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=7.9e-11 Score=100.13 Aligned_cols=104 Identities=17% Similarity=0.147 Sum_probs=78.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc----------------chh------hhcCCceEEEEccCCCH
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----------------NAM------ESFGTYVESMAGDASNK 154 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~----------------~a~------~~~~~~vevv~GDl~D~ 154 (209)
...+++|||||+|+||++++++|+++|++|.++.|++. ... ...+..+.++.+|++|+
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 45679999999999999999999999999999998731 111 11245688999999999
Q ss_pred HHHHHhhc-------CCcEEEEcC------h-------------------hH--HHHH----HHhCC-CCEEEEeccccc
Q 028418 155 KFLKTALR-------GVRSIICPS------E-------------------GF--ISNA----GSLKG-VQHVILLSQRQR 195 (209)
Q Consensus 155 ~sL~~AL~-------GvDaVIh~a------~-------------------g~--ll~A----A~~aG-VkriV~vSS~~V 195 (209)
+++.++++ .+|.|||++ . ++ ++++ .++.+ -.+||++||...
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG 168 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence 99998876 799999982 0 11 2333 33333 579999999887
Q ss_pred ccCCC
Q 028418 196 WHSSS 200 (209)
Q Consensus 196 yg~~~ 200 (209)
+...+
T Consensus 169 ~~~~~ 173 (286)
T 3uve_A 169 LKAYP 173 (286)
T ss_dssp TSCCT
T ss_pred ccCCC
Confidence 65543
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.4e-11 Score=101.16 Aligned_cols=100 Identities=16% Similarity=0.246 Sum_probs=77.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
+++|||||+|+||++++++|+++| +.|.+..|+.++... ..+..+.++.+|++|++++.++++ .+|.|
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 82 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSL 82 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEE
Confidence 689999999999999999999985 788888888765432 234568999999999999998876 78999
Q ss_pred EEcC--------------h-----------hH--HHHHH----HhCCCCEEEEecccccccCCC
Q 028418 168 ICPS--------------E-----------GF--ISNAG----SLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 168 Ih~a--------------~-----------g~--ll~AA----~~aGVkriV~vSS~~Vyg~~~ 200 (209)
||++ + ++ +++++ ++.+ .+||++||...+...+
T Consensus 83 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~ 145 (254)
T 3kzv_A 83 VANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFS 145 (254)
T ss_dssp EEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSC
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCC
Confidence 9982 0 11 33333 5556 8999999988765543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.5e-11 Score=101.76 Aligned_cols=103 Identities=12% Similarity=-0.017 Sum_probs=77.3
Q ss_pred CCCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCc---chhhh--cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~---~a~~~--~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..++++|||||+ |+||++++++|+++|++|+++.|+++ ..... ....+.++.+|++|++++.++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 456799999999 99999999999999999999999874 11111 11237889999999999988876
Q ss_pred CCcEEEEcC----h----h--------------------H--HHHHHHhC---CCCEEEEecccccccCC
Q 028418 163 GVRSIICPS----E----G--------------------F--ISNAGSLK---GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a----~----g--------------------~--ll~AA~~a---GVkriV~vSS~~Vyg~~ 199 (209)
++|.|||++ . + + +++++... .-.+||++||...+...
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~ 168 (285)
T 2p91_A 99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV 168 (285)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC
Confidence 789999982 1 0 0 34444332 23799999998776543
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.2e-11 Score=100.44 Aligned_cols=96 Identities=15% Similarity=0.172 Sum_probs=73.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh~a 171 (209)
+++||||||+|+||++++++|+++|++|.++.|++++.. ...+..|++|++++.++++ .+|+|||++
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A 95 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA 95 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 468999999999999999999999999999999887643 2457889999999988875 459999982
Q ss_pred ------h-------------------hH--HHHHHHhCC--CCEEEEecccccccCCC
Q 028418 172 ------E-------------------GF--ISNAGSLKG--VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ------~-------------------g~--ll~AA~~aG--VkriV~vSS~~Vyg~~~ 200 (209)
. ++ +++++...- -.+||++||...+....
T Consensus 96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~ 153 (251)
T 3orf_A 96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS 153 (251)
T ss_dssp CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT
T ss_pred ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC
Confidence 0 01 344443321 24899999987765443
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=6.2e-11 Score=99.37 Aligned_cols=105 Identities=12% Similarity=0.028 Sum_probs=78.6
Q ss_pred CCCCeEEEEcCCCH--HHHHHHHHHHHCCCcEEEEEeCCcchh------hhcCC-ceEEEEccCCCHHHHHHhhc-----
Q 028418 97 EARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNAM------ESFGT-YVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGf--IG~~VV~~Ll~~G~~VraLvR~~~~a~------~~~~~-~vevv~GDl~D~~sL~~AL~----- 162 (209)
...+++|||||+|+ ||++++++|+++|++|.++.|+..... ...+. .+.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 35679999999999 999999999999999999998864321 11222 68999999999999988875
Q ss_pred --CCcEEEEcC---h-------------------------hH--HHHHHHhCC--CCEEEEecccccccCCCC
Q 028418 163 --GVRSIICPS---E-------------------------GF--ISNAGSLKG--VQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 --GvDaVIh~a---~-------------------------g~--ll~AA~~aG--VkriV~vSS~~Vyg~~~~ 201 (209)
.+|.|||++ . ++ +++++...- -.+||++||...+...++
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~ 157 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPN 157 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCC
Confidence 689999982 0 00 344444321 259999999887655443
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.2e-11 Score=99.63 Aligned_cols=99 Identities=15% Similarity=0.172 Sum_probs=76.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-----CCcEEEEcC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-----GVRSIICPS 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-----GvDaVIh~a 171 (209)
.++++|||||+|+||++++++|++ .|+.|.+..|+.+... ..++++.+|++|++++.++++ ++|.|||++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA 78 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA----ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNA 78 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC----TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc----ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 456899999999999999999999 8999999988776321 346899999999999999886 789999982
Q ss_pred -------------h-----------hH--HHHHHHhCCC--CEEEEecccccccCCC
Q 028418 172 -------------E-----------GF--ISNAGSLKGV--QHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 -------------~-----------g~--ll~AA~~aGV--kriV~vSS~~Vyg~~~ 200 (209)
+ ++ +++++...-. .+||++||...+...+
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~ 135 (244)
T 4e4y_A 79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP 135 (244)
T ss_dssp CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT
T ss_pred ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC
Confidence 0 11 3445433222 4899999988765544
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=8.4e-11 Score=100.49 Aligned_cols=73 Identities=21% Similarity=0.332 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.++... ..+..+.++.+|++|++++.++++ .+|.+
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 83 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL 83 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 46799999999999999999999999999999998865432 234578999999999999888775 67999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
||+
T Consensus 84 vnn 86 (281)
T 3zv4_A 84 IPN 86 (281)
T ss_dssp ECC
T ss_pred EEC
Confidence 998
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.23 E-value=7.8e-11 Score=102.68 Aligned_cols=107 Identities=14% Similarity=0.156 Sum_probs=79.6
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc------------chh------hhcCCceEEEEccCCCHH
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------------NAM------ESFGTYVESMAGDASNKK 155 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~------------~a~------~~~~~~vevv~GDl~D~~ 155 (209)
+.....+++|||||+|+||++++++|+++|++|.+++|+.. ... ...+..+.++.+|++|++
T Consensus 41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 120 (317)
T 3oec_A 41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA 120 (317)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 44556789999999999999999999999999999988632 111 112456889999999999
Q ss_pred HHHHhhc-------CCcEEEEcC-------------h-----------hH--HHHH----HHhCC-CCEEEEeccccccc
Q 028418 156 FLKTALR-------GVRSIICPS-------------E-----------GF--ISNA----GSLKG-VQHVILLSQRQRWH 197 (209)
Q Consensus 156 sL~~AL~-------GvDaVIh~a-------------~-----------g~--ll~A----A~~aG-VkriV~vSS~~Vyg 197 (209)
++.++++ .+|+|||++ + ++ ++++ .++.+ -.+||++||...+.
T Consensus 121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~ 200 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR 200 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence 9998886 789999982 0 11 2333 33443 57899999987765
Q ss_pred CCC
Q 028418 198 SSS 200 (209)
Q Consensus 198 ~~~ 200 (209)
..+
T Consensus 201 ~~~ 203 (317)
T 3oec_A 201 GAP 203 (317)
T ss_dssp CCT
T ss_pred CCC
Confidence 543
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.22 E-value=4.5e-11 Score=101.96 Aligned_cols=75 Identities=13% Similarity=0.137 Sum_probs=62.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh-------hcCCceEEEEccCCC----HHHHHHhhc-
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME-------SFGTYVESMAGDASN----KKFLKTALR- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~-------~~~~~vevv~GDl~D----~~sL~~AL~- 162 (209)
....+++|||||+|+||++++++|+++|++|+++.|++ ++... ..+..+.++.+|++| ++++.++++
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence 44567999999999999999999999999999999988 44321 224568899999999 998888775
Q ss_pred ------CCcEEEEc
Q 028418 163 ------GVRSIICP 170 (209)
Q Consensus 163 ------GvDaVIh~ 170 (209)
++|.|||+
T Consensus 100 ~~~~~g~iD~lvnn 113 (288)
T 2x9g_A 100 CFRAFGRCDVLVNN 113 (288)
T ss_dssp HHHHHSCCCEEEEC
T ss_pred HHHhcCCCCEEEEC
Confidence 79999998
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-10 Score=98.98 Aligned_cols=105 Identities=14% Similarity=0.110 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-------------cchh------hhcCCceEEEEccCCCHHHH
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------------RNAM------ESFGTYVESMAGDASNKKFL 157 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-------------~~a~------~~~~~~vevv~GDl~D~~sL 157 (209)
..++++|||||+|+||++++++|+++|++|.++.|+. +... ...+..+.++.+|++|++++
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 4567999999999999999999999999999999842 2211 11245688999999999999
Q ss_pred HHhhc-------CCcEEEEcC-------------h-----------hH--HHHH----HHhCC-CCEEEEecccccccCC
Q 028418 158 KTALR-------GVRSIICPS-------------E-----------GF--ISNA----GSLKG-VQHVILLSQRQRWHSS 199 (209)
Q Consensus 158 ~~AL~-------GvDaVIh~a-------------~-----------g~--ll~A----A~~aG-VkriV~vSS~~Vyg~~ 199 (209)
.++++ .+|.|||++ + ++ ++++ .++.+ -.+||++||...+...
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 168 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ 168 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC
Confidence 88875 589999982 0 11 2333 34444 5799999998876554
Q ss_pred CC
Q 028418 200 SN 201 (209)
Q Consensus 200 ~~ 201 (209)
++
T Consensus 169 ~~ 170 (277)
T 3tsc_A 169 PF 170 (277)
T ss_dssp SS
T ss_pred CC
Confidence 43
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=8.8e-11 Score=88.37 Aligned_cols=97 Identities=9% Similarity=0.068 Sum_probs=78.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc-C-h-h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP-S-E-G 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~-a-~-g 173 (209)
.+++|+|+|+ |.+|+.+++.|...|++|+++.|++++.......+..++.+|.+|++.+.++ +.++|.||++ . . .
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 4568999998 9999999999999999999999987765443333567889999999999887 8899999998 2 1 2
Q ss_pred ---HHHHHHHhCCCCEEEEeccccc
Q 028418 174 ---FISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 174 ---~ll~AA~~aGVkriV~vSS~~V 195 (209)
.+...+++.+++++|..++...
T Consensus 84 ~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 84 ASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 2567788899998887766544
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=6.3e-11 Score=101.73 Aligned_cols=75 Identities=12% Similarity=0.062 Sum_probs=62.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchhh-------hcCCceEEEEccCCCHH------------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME-------SFGTYVESMAGDASNKK------------ 155 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~~-------~~~~~vevv~GDl~D~~------------ 155 (209)
...++++|||||+|+||++++++|+++|++|.++. |++++... ..+..+.++.+|++|++
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 85 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence 34567999999999999999999999999999999 88754321 22456899999999999
Q ss_pred -----HHHHhhc-------CCcEEEEc
Q 028418 156 -----FLKTALR-------GVRSIICP 170 (209)
Q Consensus 156 -----sL~~AL~-------GvDaVIh~ 170 (209)
++.++++ .+|.|||+
T Consensus 86 ~~~~~~v~~~~~~~~~~~g~iD~lvnn 112 (291)
T 1e7w_A 86 VTLFTRCAELVAACYTHWGRCDVLVNN 112 (291)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred cchHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 8888776 78999998
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-10 Score=99.17 Aligned_cols=104 Identities=12% Similarity=0.145 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc------------chh------hhcCCceEEEEccCCCHHHHH
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------------NAM------ESFGTYVESMAGDASNKKFLK 158 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~------------~a~------~~~~~~vevv~GDl~D~~sL~ 158 (209)
...+++|||||+|+||++++++|+++|++|.++.|++. ... ...+..+.++.+|++|++++.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 45679999999999999999999999999999998732 111 123456899999999999999
Q ss_pred Hhhc-------CCcEEEEcC------h-------------------hH--HHHHH----HhC-CCCEEEEecccccccCC
Q 028418 159 TALR-------GVRSIICPS------E-------------------GF--ISNAG----SLK-GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 159 ~AL~-------GvDaVIh~a------~-------------------g~--ll~AA----~~a-GVkriV~vSS~~Vyg~~ 199 (209)
++++ .+|.|||++ . ++ +++++ .+. +-.+||++||...+...
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 185 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA 185 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 8876 799999982 0 11 23332 333 46899999998776544
Q ss_pred C
Q 028418 200 S 200 (209)
Q Consensus 200 ~ 200 (209)
.
T Consensus 186 ~ 186 (299)
T 3t7c_A 186 E 186 (299)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=8.4e-12 Score=109.60 Aligned_cols=95 Identities=14% Similarity=0.096 Sum_probs=69.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCCc--ch----hhhcCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKR--NA----MESFGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~~--~a----~~~~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
.++|+||||+||||++++..|+.+|+ +|+++++++. +. .......+.++ +|+.+.+.+.++++|+|
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD 82 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence 35899999999999999999999996 8999987641 11 11111112333 68888778899999999
Q ss_pred EEEEcC------------------hhH--HHHHHHhCC-CC-EEEEecccc
Q 028418 166 SIICPS------------------EGF--ISNAGSLKG-VQ-HVILLSQRQ 194 (209)
Q Consensus 166 aVIh~a------------------~g~--ll~AA~~aG-Vk-riV~vSS~~ 194 (209)
+|||++ .++ +++++++.+ ++ +||++|+..
T Consensus 83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 999992 011 788888876 75 788877643
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=8.9e-11 Score=103.10 Aligned_cols=74 Identities=12% Similarity=0.063 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchhh-------hcCCceEEEEccCCCHH-------------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME-------SFGTYVESMAGDASNKK------------- 155 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~~-------~~~~~vevv~GDl~D~~------------- 155 (209)
...+++|||||+|+||++++++|+++|++|.++. |++++... ..+..+.++.+|++|++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 4567999999999999999999999999999999 88754321 12456899999999999
Q ss_pred ----HHHHhhc-------CCcEEEEc
Q 028418 156 ----FLKTALR-------GVRSIICP 170 (209)
Q Consensus 156 ----sL~~AL~-------GvDaVIh~ 170 (209)
++.++++ .+|+|||+
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnn 149 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNN 149 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 8888876 78999998
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.19 E-value=6.2e-11 Score=100.36 Aligned_cols=102 Identities=13% Similarity=0.158 Sum_probs=77.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc---hh------hhcCCceEEEEccCCCHHHHHHhhc----
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AM------ESFGTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~---a~------~~~~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
....+++|||||+|+||++++++|+++|++|.++.|.... .. ...+..+.++.+|++|++++.++++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3456799999999999999999999999999999875432 11 1124568899999999999998886
Q ss_pred ---CCcEEEEcC-------------h-----------hH--HHHHHHhC--CCCEEEEeccccccc
Q 028418 163 ---GVRSIICPS-------------E-----------GF--ISNAGSLK--GVQHVILLSQRQRWH 197 (209)
Q Consensus 163 ---GvDaVIh~a-------------~-----------g~--ll~AA~~a--GVkriV~vSS~~Vyg 197 (209)
++|.|||++ + ++ +++++... +-.+||++||...+.
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~ 153 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA 153 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc
Confidence 789999982 0 11 34444332 457999999976543
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=9.9e-11 Score=99.18 Aligned_cols=102 Identities=12% Similarity=0.009 Sum_probs=76.3
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCc---chhhh--cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~---~a~~~--~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+ |+||++++++|+++|++|.++.|+++ ..... ....+.++.+|++|++++.++++ +
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 84 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999 99999999999999999999999875 11111 11237899999999999988876 6
Q ss_pred CcEEEEcC----h----h--------------------H--HHHHHHhC--CCCEEEEecccccccCC
Q 028418 164 VRSIICPS----E----G--------------------F--ISNAGSLK--GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a----~----g--------------------~--ll~AA~~a--GVkriV~vSS~~Vyg~~ 199 (209)
+|.|||++ . + + +++++... .-.+||++||...+...
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~ 152 (275)
T 2pd4_A 85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM 152 (275)
T ss_dssp EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC
Confidence 79999982 1 1 0 34454433 12699999997765443
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.2e-11 Score=104.23 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=62.9
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC----------Ccchhh------hcCCceEEEEccCCCHHHHH
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD----------KRNAME------SFGTYVESMAGDASNKKFLK 158 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~----------~~~a~~------~~~~~vevv~GDl~D~~sL~ 158 (209)
....++++|||||+|+||++++++|+++|++|.+++|+ .+.... ..+..+.++.+|++|++++.
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 102 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA 102 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 34556799999999999999999999999999999987 332211 12456889999999999999
Q ss_pred Hhhc-------CCcEEEEc
Q 028418 159 TALR-------GVRSIICP 170 (209)
Q Consensus 159 ~AL~-------GvDaVIh~ 170 (209)
++++ ++|.|||+
T Consensus 103 ~~~~~~~~~~g~iD~lv~n 121 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNN 121 (322)
T ss_dssp HHHHHHHHHHSCCCEEECC
T ss_pred HHHHHHHHHcCCCCEEEEC
Confidence 8886 78999998
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.7e-10 Score=99.37 Aligned_cols=104 Identities=7% Similarity=0.011 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCcchhh---h--cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME---S--FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~--~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..++++|||||+| +||++++++|+++|++|.++.|+.+.... . ....+.++++|++|++++.++++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3467899999998 99999999999999999999998643221 1 11346899999999999998885
Q ss_pred CCcEEEEcC----h----h--------------------H--HHHHHHhCC--CCEEEEecccccccCCC
Q 028418 163 GVRSIICPS----E----G--------------------F--ISNAGSLKG--VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a----~----g--------------------~--ll~AA~~aG--VkriV~vSS~~Vyg~~~ 200 (209)
.+|.|||++ . + + +++++...- -.+||++||...+....
T Consensus 108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~ 177 (296)
T 3k31_A 108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP 177 (296)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT
T ss_pred CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC
Confidence 689999982 0 0 0 344443322 35999999987765443
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.18 E-value=9.5e-11 Score=98.06 Aligned_cols=102 Identities=10% Similarity=0.138 Sum_probs=79.7
Q ss_pred cCCCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCcch-h-------hhcCCceEEEEccCCCHHHHHHhhc---
Q 028418 96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA-M-------ESFGTYVESMAGDASNKKFLKTALR--- 162 (209)
Q Consensus 96 ~~~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~~a-~-------~~~~~~vevv~GDl~D~~sL~~AL~--- 162 (209)
....+++|||||+ |+||++++++|+++|++|.++.|+..+. . ...+..+.++.+|++|++++.++++
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 3557899999999 9999999999999999999999876543 1 1235678999999999999988876
Q ss_pred ----CCcEEEEcC-------------h-----------hH--HHHH----HHhCCCCEEEEeccccccc
Q 028418 163 ----GVRSIICPS-------------E-----------GF--ISNA----GSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 163 ----GvDaVIh~a-------------~-----------g~--ll~A----A~~aGVkriV~vSS~~Vyg 197 (209)
.+|.|||++ + ++ ++++ .++.+..+||++||...+.
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 165 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHI 165 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccc
Confidence 569999982 0 11 2333 3666788999999977654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=1.4e-10 Score=98.76 Aligned_cols=111 Identities=12% Similarity=0.088 Sum_probs=79.9
Q ss_pred CCccccCCCCeEEEEcCCCH--HHHHHHHHHHHCCCcEEEEEeCC--cchhhh--cCCceEEEEccCCCHHHHHHhhc--
Q 028418 91 EDEFPEEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDK--RNAMES--FGTYVESMAGDASNKKFLKTALR-- 162 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGf--IG~~VV~~Ll~~G~~VraLvR~~--~~a~~~--~~~~vevv~GDl~D~~sL~~AL~-- 162 (209)
...|.....+++|||||+|+ ||++++++|+++|++|.++.|+. +..... ....+.++.+|++|++++.++++
T Consensus 18 ~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 97 (280)
T 3nrc_A 18 GSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVEL 97 (280)
T ss_dssp ----CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHH
T ss_pred CCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHH
Confidence 34455667789999999988 99999999999999999999987 222211 12358899999999999998875
Q ss_pred -----CCcEEEEcC----h----h---------------------H--HHHHHHh---CCCCEEEEecccccccCCCC
Q 028418 163 -----GVRSIICPS----E----G---------------------F--ISNAGSL---KGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 -----GvDaVIh~a----~----g---------------------~--ll~AA~~---aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+|+|||++ . + + +++++.. ....+||++||...+....+
T Consensus 98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 175 (280)
T 3nrc_A 98 GKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPS 175 (280)
T ss_dssp HHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTT
T ss_pred HHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCC
Confidence 569999982 0 0 0 2333321 23589999999877655443
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=4.1e-11 Score=100.29 Aligned_cols=103 Identities=11% Similarity=0.078 Sum_probs=77.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHH---CCCcEEEEEeCCcchhhh---c-----CCceEEEEccCCCHHHHHHhhc----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~---~G~~VraLvR~~~~a~~~---~-----~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
.++++|||||+|+||++++++|++ +|++|.++.|++++.... . +..+.++.+|++|++++.++++
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 356899999999999999999999 899999999987654321 1 3468899999999999887764
Q ss_pred -----CCc--EEEEcC----h--------hH-----------------HHHHHH----hC--CCCEEEEecccccccCCC
Q 028418 163 -----GVR--SIICPS----E--------GF-----------------ISNAGS----LK--GVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 -----GvD--aVIh~a----~--------g~-----------------ll~AA~----~a--GVkriV~vSS~~Vyg~~~ 200 (209)
.+| .|||++ . -. +++++. +. +..+||++||...+...+
T Consensus 85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 164 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK 164 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT
T ss_pred ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCC
Confidence 357 999871 0 10 234442 23 457899999988775543
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.4e-10 Score=98.57 Aligned_cols=105 Identities=5% Similarity=-0.076 Sum_probs=78.4
Q ss_pred cCCCCeEEEEcCCCH--HHHHHHHHHHHCCCcEEEEEeCCcchh---hh--cCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGf--IG~~VV~~Ll~~G~~VraLvR~~~~a~---~~--~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
...++++|||||+|+ ||++++++|+++|++|.++.|+.+... .. ....+.++.+|++|++++.++++
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 455789999999999 999999999999999999999853211 11 11358899999999999998876
Q ss_pred -CCcEEEEcC---h-------------------------hH--HHHHHHhC--CCCEEEEecccccccCCC
Q 028418 163 -GVRSIICPS---E-------------------------GF--ISNAGSLK--GVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 -GvDaVIh~a---~-------------------------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~ 200 (209)
.+|.|||++ . ++ +++++... .-.+||++||...+....
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~ 178 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP 178 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC
Confidence 789999982 0 00 33444332 246999999988765543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.15 E-value=6.5e-11 Score=97.23 Aligned_cols=90 Identities=18% Similarity=0.160 Sum_probs=70.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc---CCcEEEEcC--h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPS--E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~a--~ 172 (209)
.++++|||||+|+||++++++|+++|++|.++.|+.+ +|++|++++.++++ .+|.|||++ .
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~ 70 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY 70 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence 4578999999999999999999999999999998764 79999999998886 789999982 0
Q ss_pred -----------------------hH--HHHHHHhCC--CCEEEEecccccccCCCC
Q 028418 173 -----------------------GF--ISNAGSLKG--VQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 173 -----------------------g~--ll~AA~~aG--VkriV~vSS~~Vyg~~~~ 201 (209)
++ +++++...- -.+||++||...+....+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 126 (223)
T 3uce_A 71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN 126 (223)
T ss_dssp CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT
T ss_pred CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC
Confidence 11 344443321 248999999887765543
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.9e-10 Score=95.77 Aligned_cols=108 Identities=11% Similarity=0.017 Sum_probs=80.2
Q ss_pred cccCCCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCcchh---h--hcCCceEEEEccCCCHHHHHHhhc----
Q 028418 94 FPEEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNAM---E--SFGTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 94 ~~~~~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~--~~~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
......++||||||+ |+||++++++|+++|++|.++.|+..... . .....+.++.+|++|++++.++++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 446678899999999 99999999999999999999999854321 1 112347899999999999998886
Q ss_pred ---CCcEEEEcC----h----h---------------------H--HHHHHHhC--CCCEEEEecccccccCCCC
Q 028418 163 ---GVRSIICPS----E----G---------------------F--ISNAGSLK--GVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 ---GvDaVIh~a----~----g---------------------~--ll~AA~~a--GVkriV~vSS~~Vyg~~~~ 201 (209)
.+|.|||++ . + + +++++... .-.+||++||...+...++
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~ 163 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPN 163 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCC
Confidence 679999982 1 0 0 34444332 2358999999877655443
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.4e-10 Score=98.81 Aligned_cols=102 Identities=17% Similarity=0.155 Sum_probs=74.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-chh------hhcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM------ESFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-~a~------~~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+|+||++++++|+++|++|.+..++.. ... ...+..+.++++|++|++++.++++ +
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999865443 222 1234568899999999999998876 7
Q ss_pred CcEEEEcC-------------h-----------hH--HHHHHHhC--CCCEEEEecccccccCC
Q 028418 164 VRSIICPS-------------E-----------GF--ISNAGSLK--GVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 vDaVIh~a-------------~-----------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~ 199 (209)
+|.|||++ + ++ +++++... .-.+||++||...+...
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 169 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH 169 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC
Confidence 89999982 0 11 33343221 12699999998765443
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.1e-10 Score=98.29 Aligned_cols=73 Identities=10% Similarity=0.046 Sum_probs=59.7
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeCCc---chhhh--cCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~~~---~a~~~--~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
..+++|||||+ |+||++++++|+++|++|+++.|++. ..... ......++.+|++|++++.++++ +
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999 99999999999999999999999872 11111 11235789999999999998886 7
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.|||+
T Consensus 88 iD~lv~~ 94 (265)
T 1qsg_A 88 FDGFVHS 94 (265)
T ss_dssp EEEEEEC
T ss_pred CCEEEEC
Confidence 8999998
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=99.15 E-value=2.2e-10 Score=87.80 Aligned_cols=93 Identities=16% Similarity=0.176 Sum_probs=73.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEcC--hh-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS--EG- 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~g- 173 (209)
.+++|+|+|+ |++|+++++.|.++|++|+++.|+++........++.++.+|.+|++.+.++ +.++|+||.+. ..
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEF 83 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHH
Confidence 4578999998 9999999999999999999999998876554445688999999999999987 57899999872 21
Q ss_pred H--HHHHHHhCCCCEEEEec
Q 028418 174 F--ISNAGSLKGVQHVILLS 191 (209)
Q Consensus 174 ~--ll~AA~~aGVkriV~vS 191 (209)
. +...+++.++.++|-..
T Consensus 84 n~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 84 NLKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp HHHHHHHHHHHCCCCEEEEE
T ss_pred HHHHHHHHHHhCCceEEEEE
Confidence 1 55666776766666543
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.3e-10 Score=94.63 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=76.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe-CCcchhh------hcCCceEEEEccCCCHHHHHHhhcC-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAME------SFGTYVESMAGDASNKKFLKTALRG------- 163 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR-~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~G------- 163 (209)
.++++|||||+|+||++++++|+++|++|.++.+ +.+.... ..+..+.++.+|++|++.+.++++.
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 4578999999999999999999999999999754 4443321 1245688999999999988887653
Q ss_pred ------CcEEEEcC-------------h-----------hH--HHHHHHhC--CCCEEEEecccccccCCCC
Q 028418 164 ------VRSIICPS-------------E-----------GF--ISNAGSLK--GVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 164 ------vDaVIh~a-------------~-----------g~--ll~AA~~a--GVkriV~vSS~~Vyg~~~~ 201 (209)
+|.|||++ + ++ +++++... +-.+||++||...+...++
T Consensus 86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~ 157 (255)
T 3icc_A 86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD 157 (255)
T ss_dssp HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTT
T ss_pred cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCC
Confidence 89999982 0 11 34444332 3468999999877655443
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.13 E-value=7.2e-10 Score=95.66 Aligned_cols=103 Identities=16% Similarity=0.162 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc---CCcEEEEcC--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPS-- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~a-- 171 (209)
...+++|||||++.||+.++++|.++|++|.+..|+.+.........+..+.+|++|++.++++++ .+|.+|+.+
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi 88 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI 88 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 358899999999999999999999999999999999887766666778999999999999988775 689999872
Q ss_pred --------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 --------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 --------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++...++.+ .+||++||.......+
T Consensus 89 ~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~ 142 (242)
T 4b79_A 89 SRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSA 142 (242)
T ss_dssp CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCS
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCC
Confidence 011 223334445 8999999987654443
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.2e-10 Score=97.58 Aligned_cols=99 Identities=13% Similarity=0.062 Sum_probs=67.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHh----hcCCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTA----LRGVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~A----L~GvDaVIh 169 (209)
|+++|||||+|+||++++++|+++|++|+++.|++++.... .+..+..+ |..+...+-+. +.++|+|||
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence 46899999999999999999999999999999987654321 12233333 54444333222 237999999
Q ss_pred cC--h-----------------------hH--HHH----HHHhCCCCEEEEecccccccCC
Q 028418 170 PS--E-----------------------GF--ISN----AGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a--~-----------------------g~--ll~----AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ . ++ +++ .+++.+..+||++||...+...
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 139 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW 139 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC
Confidence 82 0 11 223 3346678999999998776543
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=99.09 E-value=5.8e-10 Score=83.69 Aligned_cols=93 Identities=18% Similarity=0.146 Sum_probs=74.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHh-hcCCcEEEEcC--hh-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPS--EG- 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~g- 173 (209)
.++|+|+|+ |++|+++++.|.++|++|+++.|+++....... .+++++.+|..+++.+.++ ++++|.||++. ..
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 82 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV 82 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH
Confidence 368999987 999999999999999999999998876543321 2567889999999998866 78999999982 21
Q ss_pred --HHHHHHHhCCCCEEEEecc
Q 028418 174 --FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS 192 (209)
.+..+++..+++++|..++
T Consensus 83 ~~~~~~~~~~~~~~~ii~~~~ 103 (140)
T 1lss_A 83 NLMSSLLAKSYGINKTIARIS 103 (140)
T ss_dssp HHHHHHHHHHTTCCCEEEECS
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 2567788888888887654
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-10 Score=96.73 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHH---Hh---hcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLK---TA---LRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~---~A---L~GvDaVIh~ 170 (209)
.++++|||||+|+||++++++|.+ |+.|.++.|++++..... ..+++++.+|++|..... ++ +..+|.|||+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~ 82 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA 82 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence 357899999999999999999987 999999999886654322 246889999999885521 22 2378999998
Q ss_pred C-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 171 S-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 171 a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+ + ++ ++...++.+ .+||++||...+...+
T Consensus 83 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~ 141 (245)
T 3e9n_A 83 AAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHP 141 (245)
T ss_dssp C----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------
T ss_pred CCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCC
Confidence 2 0 11 223334445 8999999988776543
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.2e-09 Score=94.22 Aligned_cols=101 Identities=14% Similarity=0.223 Sum_probs=78.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--cCCceEEEEccCCCHHHHHHhhc-------CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (209)
++||||||++.||+.++++|.++|++|.+..|+.+..... ...++..+++|++|+++++++++ .+|.+|+.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN 82 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899999999999999999999999999999988665432 23568899999999999887763 78999987
Q ss_pred C------------------------hhH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 171 S------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 171 a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+ .++ ++..+++.+ .+||++||.......++
T Consensus 83 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~ 142 (247)
T 3ged_A 83 ACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPD 142 (247)
T ss_dssp CCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTT
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCC
Confidence 2 011 233344555 79999999877655443
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=99.08 E-value=1e-09 Score=85.57 Aligned_cols=91 Identities=18% Similarity=0.258 Sum_probs=71.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cc---hhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEcC--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RN---AMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS-- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~---a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a-- 171 (209)
+++|+|+|+ |.+|+++++.|.+.|++|+++.|++ ++ .......+++++.||.+|++.+.++ ++++|+||.+.
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 468999996 9999999999999999999999985 32 2233345689999999999999988 99999999882
Q ss_pred hh-H--HHHHHHhC-CCCEEEEe
Q 028418 172 EG-F--ISNAGSLK-GVQHVILL 190 (209)
Q Consensus 172 ~g-~--ll~AA~~a-GVkriV~v 190 (209)
.. + +...|++. +..++|-.
T Consensus 82 d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 82 DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEEE
Confidence 21 1 44556554 77777653
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=3.8e-09 Score=82.73 Aligned_cols=98 Identities=13% Similarity=0.125 Sum_probs=77.6
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHh-hcCCcEEEEcC-
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPS- 171 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a- 171 (209)
+..+.++|+|+|+ |.+|+.+++.|...|++|+++.|++++..... ..++.++.+|..+++.+.++ +.++|.||.+.
T Consensus 15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 3456789999996 99999999999999999999999988765544 34577889999999998887 88999999882
Q ss_pred -hh---HHHHHHHh-CCCCEEEEeccc
Q 028418 172 -EG---FISNAGSL-KGVQHVILLSQR 193 (209)
Q Consensus 172 -~g---~ll~AA~~-aGVkriV~vSS~ 193 (209)
.. .++..++. .+..++|.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 94 DDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 22 25566666 788888876654
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.1e-09 Score=102.85 Aligned_cols=98 Identities=20% Similarity=0.256 Sum_probs=76.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcc---hh------hhcCCceEEEEccCCCHHHHHHhhc------
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---AM------ESFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~---a~------~~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
++++|||||+|.||+++++.|.++|+ .|.++.|+... +. ...+..+.++.+|++|++++.++++
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 48999999999999999999999999 67777776422 11 1235678999999999999999986
Q ss_pred CCcEEEEcC--h-----------------------hH--HHHHHHhCCCCEEEEecccccc
Q 028418 163 GVRSIICPS--E-----------------------GF--ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 163 GvDaVIh~a--~-----------------------g~--ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.+|.|||++ . ++ +.+++......+||++||+...
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~ 379 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAV 379 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHH
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhc
Confidence 479999982 0 11 5667778889999999996543
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.01 E-value=3.2e-09 Score=91.81 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=83.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
....+++|||||++.||+.++++|.++|++|.+..|+.+++.+ ..+..+..+++|++|+++++++++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4567899999999999999999999999999999998865431 235668899999999999988764
Q ss_pred CCcEEEEcC-------------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 163 GVRSIICPS-------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a-------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|.+|+.+ .++ ++..+++.+-.+||++||.......+
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~ 152 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGF 152 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSS
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCC
Confidence 689999872 011 34455667778999999987654443
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.7e-09 Score=101.73 Aligned_cols=103 Identities=13% Similarity=0.114 Sum_probs=76.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE--EeCCcc-------------hh------hhcCCceEEEEccCCCHH
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL--VKDKRN-------------AM------ESFGTYVESMAGDASNKK 155 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL--vR~~~~-------------a~------~~~~~~vevv~GDl~D~~ 155 (209)
.+.+++|||||+|.||.++++.|.++|+++.++ .|++.. .. ...+..+.++.+|++|++
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 456799999999999999999999999995555 576422 11 123556899999999999
Q ss_pred HHHHhhcC------CcEEEEcC------------------------hhH--HHHHHHhCC-----CCEEEEecccccccC
Q 028418 156 FLKTALRG------VRSIICPS------------------------EGF--ISNAGSLKG-----VQHVILLSQRQRWHS 198 (209)
Q Consensus 156 sL~~AL~G------vDaVIh~a------------------------~g~--ll~AA~~aG-----VkriV~vSS~~Vyg~ 198 (209)
++.++++. +|.|||++ .|+ +.+++.... ..+||++||+..+..
T Consensus 329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g 408 (525)
T 3qp9_A 329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG 408 (525)
T ss_dssp HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence 99999875 59999982 011 445554443 899999999765543
Q ss_pred C
Q 028418 199 S 199 (209)
Q Consensus 199 ~ 199 (209)
.
T Consensus 409 ~ 409 (525)
T 3qp9_A 409 G 409 (525)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-09 Score=100.57 Aligned_cols=102 Identities=13% Similarity=0.031 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch--hhh-cCCceEEEEccCCCHHHHHHhhc-------C-Cc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MES-FGTYVESMAGDASNKKFLKTALR-------G-VR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a--~~~-~~~~vevv~GDl~D~~sL~~AL~-------G-vD 165 (209)
.+.+++|||||+|.||+++++.|.++|++|.++.|+.... ... ...+++++.+|++|++++.++++ + +|
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id 290 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD 290 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence 3577999999999999999999999999999999875322 111 11246789999999999988875 4 99
Q ss_pred EEEEcC------------------------hhH--HHHHHHhC----CCCEEEEecccccccC
Q 028418 166 SIICPS------------------------EGF--ISNAGSLK----GVQHVILLSQRQRWHS 198 (209)
Q Consensus 166 aVIh~a------------------------~g~--ll~AA~~a----GVkriV~vSS~~Vyg~ 198 (209)
.|||++ .++ +.+++... +..+||++||...+..
T Consensus 291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g 353 (454)
T 3u0b_A 291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAG 353 (454)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHC
T ss_pred EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCC
Confidence 999982 011 44555443 7789999999765433
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.95 E-value=1.6e-09 Score=91.49 Aligned_cols=74 Identities=12% Similarity=0.091 Sum_probs=62.9
Q ss_pred CCCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeCCcch-h---hhcCCceEEEEccCCCHHHHHHhhc--------
Q 028418 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR-------- 162 (209)
Q Consensus 97 ~~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~---~~~~~~vevv~GDl~D~~sL~~AL~-------- 162 (209)
..++++||||| +|+||++++++|+++|++|.++.|++++. . ...+..+.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 34678999999 99999999999999999999999987542 2 2234467899999999999998886
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
++|.|||+
T Consensus 85 ~~~iD~lv~n 94 (269)
T 2h7i_A 85 GNKLDGVVHS 94 (269)
T ss_dssp TCCEEEEEEC
T ss_pred CCCceEEEEC
Confidence 79999997
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.2e-09 Score=95.89 Aligned_cols=98 Identities=10% Similarity=0.069 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe---------CCcchhhh---c-CCceEEEEccCCCHHHHHHhh--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAMES---F-GTYVESMAGDASNKKFLKTAL-- 161 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR---------~~~~a~~~---~-~~~vevv~GDl~D~~sL~~AL-- 161 (209)
...+++|||||+|+||++++++|+++|++|++..| +.++.... + ..+. .+.+|+.|.+.+.+++
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~~ 85 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVKT 85 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHHH
Confidence 34679999999999999999999999999999754 44433211 1 1111 2458999998776654
Q ss_pred -----cCCcEEEEcC-------------h-----------hH--H----HHHHHhCCCCEEEEeccccc
Q 028418 162 -----RGVRSIICPS-------------E-----------GF--I----SNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 162 -----~GvDaVIh~a-------------~-----------g~--l----l~AA~~aGVkriV~vSS~~V 195 (209)
..+|.|||++ + ++ + +..+++.+..|||++||...
T Consensus 86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~ 154 (319)
T 1gz6_A 86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG 154 (319)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence 3789999982 0 11 2 23345678899999999643
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-08 Score=88.19 Aligned_cols=104 Identities=11% Similarity=0.131 Sum_probs=80.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-----hhcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-----~~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
+...+++|||||++.||+.++++|.++|.+|.+..|+.+... ...+..+.++.+|++|+++++++++ .
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 456789999999999999999999999999999999876532 1235678899999999998887764 6
Q ss_pred CcEEEEcC-----------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 164 VRSIICPS-----------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 164 vDaVIh~a-----------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|.+|+.+ .++ ++..+++.+ .+||++||.......+
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~ 148 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQG 148 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCS
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCC
Confidence 89999882 011 233344445 7999999987654443
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.90 E-value=5.9e-10 Score=92.81 Aligned_cols=100 Identities=12% Similarity=0.029 Sum_probs=67.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-E--eCCcchhhhcC--CceEEEEccCCCHHHHHHh----hcCCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-V--KDKRNAMESFG--TYVESMAGDASNKKFLKTA----LRGVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-v--R~~~~a~~~~~--~~vevv~GDl~D~~sL~~A----L~GvDaVIh 169 (209)
++++|||||+|+||++++++|+++|++|.++ . |++++...... .+.++. |..+...+-+. +.++|.|||
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~ 78 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIVS 78 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3689999999999999999999999999999 6 98765432211 233332 44443333222 237899999
Q ss_pred cC----h---h--------------------H--HHH----HHHhCCCCEEEEecccccccCCC
Q 028418 170 PS----E---G--------------------F--ISN----AGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 170 ~a----~---g--------------------~--ll~----AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
++ . + + +++ .+++.+..+||++||...+...+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~ 142 (244)
T 1zmo_A 79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLA 142 (244)
T ss_dssp CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT
T ss_pred CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCC
Confidence 82 2 1 0 223 33467789999999987765443
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.89 E-value=6.7e-09 Score=89.87 Aligned_cols=106 Identities=13% Similarity=0.061 Sum_probs=81.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
+...+++|||||++.||+.++++|.++|++|.+..|+.++..+ ..+..+..+++|++|+++++++++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 3567899999999999999999999999999999998765431 234568899999999999987764
Q ss_pred CCcEEEEcC------------------------hhH------HHHHHH-hCCCCEEEEecccccccCCCC
Q 028418 163 GVRSIICPS------------------------EGF------ISNAGS-LKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 GvDaVIh~a------------------------~g~------ll~AA~-~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+|.+|+.+ .+. ++..+. +.+-.+||++||.......++
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~ 155 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT 155 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC
Confidence 679999972 011 233333 346689999999877655443
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.88 E-value=8.6e-09 Score=82.22 Aligned_cols=93 Identities=12% Similarity=0.094 Sum_probs=73.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh--hcCCcEEEEcC--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA--LRGVRSIICPS-- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A--L~GvDaVIh~a-- 171 (209)
..+++|+|+| .|.+|+.+++.|.+. |++|+++.|++++.......+++++.+|.+|++.+.++ ++++|.||.+.
T Consensus 37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 3467899998 599999999999999 99999999998776544334678899999999999988 89999999872
Q ss_pred hh---HHHHHHHhCC-CCEEEEe
Q 028418 172 EG---FISNAGSLKG-VQHVILL 190 (209)
Q Consensus 172 ~g---~ll~AA~~aG-VkriV~v 190 (209)
.. .++..++..+ ..++|..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 116 HQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEEE
Confidence 11 2556667666 5555543
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.8e-08 Score=86.96 Aligned_cols=99 Identities=13% Similarity=0.139 Sum_probs=77.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVI 168 (209)
+...+++|||||++.||+.++++|.++|++|.+..|+..... ...-.+++|++|++.+.++++ ++|.+|
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV 83 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL----PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV 83 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS----CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC----CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 567889999999999999999999999999999999765432 123468999999998887764 689999
Q ss_pred EcC---------------h-----------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 169 CPS---------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 169 h~a---------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
+.+ + +. ++..+++.+-.+||++||......
T Consensus 84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~ 145 (261)
T 4h15_A 84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP 145 (261)
T ss_dssp ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC
Confidence 861 0 11 344456677789999999776543
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.4e-08 Score=83.48 Aligned_cols=91 Identities=19% Similarity=0.226 Sum_probs=73.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHh-hcCCcEEEEcC--h-hH
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPS--E-GF 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~-g~ 174 (209)
|+|+|+|+ |.+|+++++.|.++|++|+++.++++...... ..+++++.||.+|++.+.++ ++++|+||.+. . .+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 79 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN 79 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence 57999997 99999999999999999999999998765422 13578999999999999987 89999999872 1 11
Q ss_pred --HHHHHHh-CCCCEEEEec
Q 028418 175 --ISNAGSL-KGVQHVILLS 191 (209)
Q Consensus 175 --ll~AA~~-aGVkriV~vS 191 (209)
+...+++ .+..++|-..
T Consensus 80 ~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 80 LFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp HHHHHHHHHTSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCeEEEEE
Confidence 4455555 7888887543
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.82 E-value=9.2e-09 Score=89.90 Aligned_cols=74 Identities=14% Similarity=0.143 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||++.||+.++++|.++|++|.+..|+.++.. ..++..+..+++|++|++.++++++ .+|.
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 56789999999999999999999999999999999886543 3346678899999999999888764 6799
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
+|+.
T Consensus 107 LVNN 110 (273)
T 4fgs_A 107 LFVN 110 (273)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9987
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.6e-08 Score=86.24 Aligned_cols=104 Identities=13% Similarity=0.204 Sum_probs=79.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h---hhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M---ESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~---~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
...+++|||||++.||+.+++.|.++|++|.+..|+.... . ...+..+..+++|++|++.++++++ ++|.+|+.
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN 86 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN 86 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 5678999999999999999999999999999999986432 1 2345678899999999999888875 58999987
Q ss_pred C------------------------hhH------HHHHHHhCC-CCEEEEecccccccCCC
Q 028418 171 S------------------------EGF------ISNAGSLKG-VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 171 a------------------------~g~------ll~AA~~aG-VkriV~vSS~~Vyg~~~ 200 (209)
+ .++ ++..+++.+ -.+||++||.......+
T Consensus 87 AGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~ 147 (247)
T 4hp8_A 87 AGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI 147 (247)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS
T ss_pred CCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC
Confidence 2 011 233344444 57999999987655443
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.80 E-value=7.1e-08 Score=81.67 Aligned_cols=75 Identities=8% Similarity=0.006 Sum_probs=62.1
Q ss_pred cCCCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCHHHHHHhhc----
Q 028418 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
+...+++|||||+| -||+.++++|.++|++|.+..|+.+...+ .-+..+.++++|++|++++.++++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45678999999987 79999999999999999999998754321 123468899999999998887764
Q ss_pred ---CCcEEEEc
Q 028418 163 ---GVRSIICP 170 (209)
Q Consensus 163 ---GvDaVIh~ 170 (209)
.+|.+|+.
T Consensus 83 ~~G~iD~lvnn 93 (256)
T 4fs3_A 83 DVGNIDGVYHS 93 (256)
T ss_dssp HHCCCSEEEEC
T ss_pred HhCCCCEEEec
Confidence 68999987
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.79 E-value=2.6e-08 Score=88.58 Aligned_cols=91 Identities=18% Similarity=0.151 Sum_probs=72.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC---hh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---EG 173 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---~g 173 (209)
..+|+|||.|| |++|+.+++.|. +.++|.+.+|+.+++... ...+..+..|+.|+++|.++++++|.||++. .+
T Consensus 14 g~~mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~ 90 (365)
T 3abi_A 14 GRHMKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG 90 (365)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGH
T ss_pred CCccEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCccc
Confidence 44568999999 999999998764 578999999988776544 3457888999999999999999999999983 22
Q ss_pred -HHHHHHHhCCCCEEEEec
Q 028418 174 -FISNAGSLKGVQHVILLS 191 (209)
Q Consensus 174 -~ll~AA~~aGVkriV~vS 191 (209)
.++++|.++|+ |+|=+|
T Consensus 91 ~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 91 FKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp HHHHHHHHHHTC-EEEECC
T ss_pred chHHHHHHhcCc-ceEeee
Confidence 38899999995 566554
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1.5e-08 Score=84.03 Aligned_cols=90 Identities=13% Similarity=0.042 Sum_probs=72.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEcC--h-h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS--E-G 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~-g 173 (209)
.++.|+|.|+ |.+|+++++.|.++|+ |+++.|+++...... .+++++.||.+|++.|.++ ++++|+||.+. . .
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 84 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE 84 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH
Confidence 4568999998 9999999999999999 999999988765444 5689999999999999988 89999999872 2 1
Q ss_pred H--HHHHHHhCCCC-EEEEe
Q 028418 174 F--ISNAGSLKGVQ-HVILL 190 (209)
Q Consensus 174 ~--ll~AA~~aGVk-riV~v 190 (209)
+ +...|++.+.+ ++|-.
T Consensus 85 n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEE
Confidence 2 45667777776 66543
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1.9e-08 Score=93.08 Aligned_cols=71 Identities=10% Similarity=0.076 Sum_probs=61.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|+||| +|++|+++++.|++.|++|++..|+++++..... ..++.+.+|++|++++.++++++|+||++
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~ 75 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL 75 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence 46899998 8999999999999999999999998876644322 24778999999999999999999999998
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1.5e-08 Score=89.93 Aligned_cols=95 Identities=14% Similarity=0.112 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcch--hhhcCCceE-EEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--MESFGTYVE-SMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a--~~~~~~~ve-vv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
..++|+||||+||+|..++..|+.+| ++|++++++++.. ..+...... .+.+ +.+...+.+|++|+|.|||++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcCC
Confidence 45689999999999999999999999 8999998777521 111111111 1222 344667889999999999982
Q ss_pred ----h-------------hH--HHHHHHhCCCCEEEEeccc
Q 028418 172 ----E-------------GF--ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ----~-------------g~--ll~AA~~aGVkriV~vSS~ 193 (209)
. ++ +++++.+.+.+.+|+++|-
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 1 11 6778888899989999874
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1e-08 Score=88.16 Aligned_cols=75 Identities=12% Similarity=0.116 Sum_probs=63.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc---C--CceEEEEccCCCHHHHHHhhcCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~---~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~a 171 (209)
...+++|||||+|.+|++++..|+++|++|+++.|+++++.... . .+++++.+|++|++.+.++++.+|.|||++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a 196 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 196 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 34679999999999999999999999999999999876553221 1 136778899999999999999999999983
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.73 E-value=9.3e-08 Score=73.81 Aligned_cols=72 Identities=15% Similarity=0.217 Sum_probs=63.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
-+++|+|.|+ |.+|+.+++.|.++|++|+++.++++........++.++.||.+|++.|.++ +.++|+||.+
T Consensus 6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 3568999997 9999999999999999999999999877554445688999999999999876 6889999987
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.6e-08 Score=90.50 Aligned_cols=89 Identities=16% Similarity=0.124 Sum_probs=72.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC---CcEEEEEeCCcchhhhc---C----CceEEEEccCCCHHHHHHhhcC--CcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESF---G----TYVESMAGDASNKKFLKTALRG--VRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G---~~VraLvR~~~~a~~~~---~----~~vevv~GDl~D~~sL~~AL~G--vDa 166 (209)
|++|+|+|| |+||+.+++.|.+.+ .+|.+..|+++++.... + ..++.+..|++|++++.+++++ +|+
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 468999999 999999999999998 38999999987754321 1 2588999999999999999998 899
Q ss_pred EEEcC----hhHHHHHHHhCCCCEEE
Q 028418 167 IICPS----EGFISNAGSLKGVQHVI 188 (209)
Q Consensus 167 VIh~a----~g~ll~AA~~aGVkriV 188 (209)
||+++ ...++++|.++|+.-+.
T Consensus 80 Vin~ag~~~~~~v~~a~l~~g~~vvD 105 (405)
T 4ina_A 80 VLNIALPYQDLTIMEACLRTGVPYLD 105 (405)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEEE
T ss_pred EEECCCcccChHHHHHHHHhCCCEEE
Confidence 99983 22388999999987544
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.4e-08 Score=89.85 Aligned_cols=93 Identities=13% Similarity=0.075 Sum_probs=66.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeC----Ccchh----hhcCCceEEEEccCCCHHHHHHhhcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKD----KRNAM----ESFGTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~----~~~a~----~~~~~~vevv~GDl~D~~sL~~AL~G 163 (209)
.++|+||||+||||++++..|+.+++ +|++++++ .+++. .+......+ .+|+.....+.+|++|
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~~ 83 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFKD 83 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhCC
Confidence 46899999999999999999999885 79988877 33221 111110111 2466666678899999
Q ss_pred CcEEEEcC-----hh-------------H--HHHHHHhCC-CC-EEEEecc
Q 028418 164 VRSIICPS-----EG-------------F--ISNAGSLKG-VQ-HVILLSQ 192 (209)
Q Consensus 164 vDaVIh~a-----~g-------------~--ll~AA~~aG-Vk-riV~vSS 192 (209)
+|.|||++ .+ + +++++.+.+ .+ +||++|.
T Consensus 84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 99999982 11 1 677787774 77 8999986
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=6.8e-08 Score=84.95 Aligned_cols=91 Identities=9% Similarity=-0.015 Sum_probs=62.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEe--CCcchh-------h---hcCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAM-------E---SFGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR--~~~~a~-------~---~~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
++|+||||+||||++++..|+.+++ +++.+++ +++++. . ..+..+++..++ +++.++++|+|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence 5899999999999999999998885 5666666 433221 0 111123333221 24678999999
Q ss_pred EEEEcC-----h-------------h--HHHHHHHhCCCCEEEEeccccc
Q 028418 166 SIICPS-----E-------------G--FISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 166 aVIh~a-----~-------------g--~ll~AA~~aGVkriV~vSS~~V 195 (209)
.|||++ . + .+++++++.+ +++|+++|--+
T Consensus 77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 999992 1 1 1788888888 98999887433
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.63 E-value=3.4e-08 Score=94.17 Aligned_cols=100 Identities=11% Similarity=0.053 Sum_probs=67.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe---------CCcchhhh---c-CCceEEEEccCCCHHHHHHhhc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAMES---F-GTYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR---------~~~~a~~~---~-~~~vevv~GDl~D~~sL~~AL~ 162 (209)
...++++|||||+|.||++++++|+++|++|.++.| +.+.+... . ..+. .+.+|+.|.+++.++++
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~~~~~~ 94 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDGAKVIE 94 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGHHHHHC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHHHHHHH
Confidence 456789999999999999999999999999999987 43333211 1 1111 24589999998887775
Q ss_pred -------CCcEEEEcC-------------h-----------hH--HHH----HHHhCCCCEEEEecccccc
Q 028418 163 -------GVRSIICPS-------------E-----------GF--ISN----AGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 163 -------GvDaVIh~a-------------~-----------g~--ll~----AA~~aGVkriV~vSS~~Vy 196 (209)
.+|.|||++ + ++ +.+ .+++.+..+||++||...+
T Consensus 95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~ 165 (613)
T 3oml_A 95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI 165 (613)
T ss_dssp ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHH
T ss_pred HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence 579999982 0 11 233 3467788899999997654
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.57 E-value=8.9e-08 Score=89.25 Aligned_cols=74 Identities=16% Similarity=0.147 Sum_probs=61.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+..+++|+|+|| |++|+.+++.|++. +++|++..|+++++..... .+++++..|+.|.+.+.++++++|+||++
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 344678999998 99999999999998 7899999999877643321 24778899999999999999999999998
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=8.1e-07 Score=75.64 Aligned_cols=35 Identities=14% Similarity=-0.000 Sum_probs=32.2
Q ss_pred CCCeEEEEcCC--CHHHHHHHHHHHHCCCcEEEEEeC
Q 028418 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKD 132 (209)
Q Consensus 98 ~~~~ILVTGAT--GfIG~~VV~~Ll~~G~~VraLvR~ 132 (209)
.++++|||||+ |+||++++++|+++|++|.++.|+
T Consensus 7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~ 43 (297)
T 1d7o_A 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV 43 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence 45789999999 999999999999999999999865
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=4.3e-07 Score=83.27 Aligned_cols=86 Identities=14% Similarity=0.078 Sum_probs=70.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEcC--h-hH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS--E-GF 174 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~-g~ 174 (209)
++.|+|.|. |.+|+.|++.|.++|++|+++.++++........++.++.||.+|++.|.+| +..+|+||.+. . .+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n 82 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTN 82 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHH
Confidence 467999997 9999999999999999999999999876654445688999999999999998 88999999882 1 11
Q ss_pred --HHHHHHhCCCC
Q 028418 175 --ISNAGSLKGVQ 185 (209)
Q Consensus 175 --ll~AA~~aGVk 185 (209)
++..+++.+..
T Consensus 83 ~~i~~~ar~~~p~ 95 (413)
T 3l9w_A 83 LQLTEMVKEHFPH 95 (413)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCC
Confidence 55566666554
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.46 E-value=1.4e-07 Score=82.65 Aligned_cols=88 Identities=9% Similarity=0.171 Sum_probs=62.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEe--CCcchhh----h-----cCCceEEEEccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAME----S-----FGTYVESMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR--~~~~a~~----~-----~~~~vevv~GDl~D~~sL~~AL~GvDa 166 (209)
++|+||||+|++|++++..|+.+++ +++.+++ +++++.. + +...+.+..+ + .++++|+|.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~---~----~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG---G----YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC---C----GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeC---C----HHHhCCCCE
Confidence 5899999999999999999998886 5666666 4433211 0 1122333331 2 568999999
Q ss_pred EEEcC-----hh-------------H--HHHHHHhCCCCEEEEecccc
Q 028418 167 IICPS-----EG-------------F--ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 167 VIh~a-----~g-------------~--ll~AA~~aGVkriV~vSS~~ 194 (209)
|||++ .| + +++++++.+.+.+|+++|--
T Consensus 74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNP 121 (303)
T 1o6z_A 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNP 121 (303)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSS
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 99982 11 1 67888899999999998743
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.46 E-value=7.9e-07 Score=87.47 Aligned_cols=74 Identities=23% Similarity=0.381 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHH-HCCCc-EEEEEeCCc---chh------hhcCCceEEEEccCCCHHHHHHhhcC--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLI-VKRTR-IKALVKDKR---NAM------ESFGTYVESMAGDASNKKFLKTALRG-- 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll-~~G~~-VraLvR~~~---~a~------~~~~~~vevv~GDl~D~~sL~~AL~G-- 163 (209)
.+.+++|||||+|.||+.+++.|. ++|.+ |..+.|+.. .+. ...+..+.++.+|++|++++.++++.
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 356799999999999999999999 79985 888888842 221 12355688999999999999999864
Q ss_pred ----CcEEEEc
Q 028418 164 ----VRSIICP 170 (209)
Q Consensus 164 ----vDaVIh~ 170 (209)
+|.|||+
T Consensus 608 ~~~~id~lVnn 618 (795)
T 3slk_A 608 DEHPLTAVVHA 618 (795)
T ss_dssp TTSCEEEEEEC
T ss_pred HhCCCEEEEEC
Confidence 5899998
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=3.5e-07 Score=78.99 Aligned_cols=36 Identities=11% Similarity=0.040 Sum_probs=32.6
Q ss_pred CCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeCC
Q 028418 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK 133 (209)
Q Consensus 98 ~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~~ 133 (209)
.++++||||| +|+||++++++|+++|++|.++.|++
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~ 45 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPP 45 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHH
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEeccc
Confidence 4578999999 89999999999999999999998753
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=98.43 E-value=3.9e-07 Score=79.51 Aligned_cols=88 Identities=14% Similarity=0.083 Sum_probs=71.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEcC--h-hH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS--E-GF 174 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~-g~ 174 (209)
.+.|+|.|+ |.+|++++++|.++|+ |+++.++++... ....++.++.||.+|++.|.+| ++++|+||.+. + .+
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n 191 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET 191 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHH
Confidence 468999997 9999999999999999 999999998776 4445789999999999999998 89999999872 2 12
Q ss_pred --HHHHHHhCCCC-EEEE
Q 028418 175 --ISNAGSLKGVQ-HVIL 189 (209)
Q Consensus 175 --ll~AA~~aGVk-riV~ 189 (209)
+...+++.+.+ ++|-
T Consensus 192 ~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 192 IHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHCCCCeEEE
Confidence 44556776665 5543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.38 E-value=5.9e-07 Score=77.56 Aligned_cols=35 Identities=11% Similarity=0.024 Sum_probs=32.1
Q ss_pred CCCeEEEEcC--CCHHHHHHHHHHHHCCCcEEEEEeC
Q 028418 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD 132 (209)
Q Consensus 98 ~~~~ILVTGA--TGfIG~~VV~~Ll~~G~~VraLvR~ 132 (209)
.++++||||| +++||++++++|+++|++|.++.|+
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~ 44 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP 44 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence 4578999999 8999999999999999999999864
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.32 E-value=5.9e-07 Score=72.01 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=63.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHH---HHhh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL---KTAL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL---~~AL--~GvDaVIh~a~ 172 (209)
+.++||||||+|.||..+++.+...|++|.+++|++++.......+.+. ..|..+.+.. .+.. .++|.||++..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 5679999999999999999999999999999999876543222222332 2366665433 3333 26999998842
Q ss_pred hH----HHHHHHhCCCCEEEEecccc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS~~ 194 (209)
+. .++.++.. .++|.+++..
T Consensus 117 ~~~~~~~~~~l~~~--G~~v~~g~~~ 140 (198)
T 1pqw_A 117 GEAIQRGVQILAPG--GRFIELGKKD 140 (198)
T ss_dssp THHHHHHHHTEEEE--EEEEECSCGG
T ss_pred hHHHHHHHHHhccC--CEEEEEcCCC
Confidence 22 33333433 4899888755
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=7e-06 Score=75.74 Aligned_cols=73 Identities=10% Similarity=0.144 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCHHHHH--HHHHHHHCCCcEEEEEeCCcchh------------------hhcCCceEEEEccCCCHHHH
Q 028418 98 ARDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFL 157 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~--VV~~Ll~~G~~VraLvR~~~~a~------------------~~~~~~vevv~GDl~D~~sL 157 (209)
..+++|||||++.||+. ++++|.++|++|.++.|+..... ...+..+..+.+|++|++++
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v 138 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK 138 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence 45699999999999999 99999999999999998754311 12345688999999999988
Q ss_pred HHhhc-------CCcEEEEc
Q 028418 158 KTALR-------GVRSIICP 170 (209)
Q Consensus 158 ~~AL~-------GvDaVIh~ 170 (209)
.++++ .+|.+|+.
T Consensus 139 ~~~v~~i~~~~G~IDiLVnN 158 (418)
T 4eue_A 139 DKVIKYIKDEFGKIDLFVYS 158 (418)
T ss_dssp HHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEEC
Confidence 87764 57999885
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.27 E-value=1.6e-06 Score=75.49 Aligned_cols=72 Identities=11% Similarity=0.092 Sum_probs=52.8
Q ss_pred CCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCC---------cch---hhh------cCCceEEEEccCCCH--H-
Q 028418 99 RDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK---------RNA---MES------FGTYVESMAGDASNK--K- 155 (209)
Q Consensus 99 ~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~---------~~a---~~~------~~~~vevv~GDl~D~--~- 155 (209)
.+++|||||++ .||++++++|+++|++|.+..|++ ++. ... ....+.++..|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 56899999975 999999999999999999877654 111 111 112367888999877 6
Q ss_pred -----------------HHHHhh-------cCCcEEEEc
Q 028418 156 -----------------FLKTAL-------RGVRSIICP 170 (209)
Q Consensus 156 -----------------sL~~AL-------~GvDaVIh~ 170 (209)
++.+++ ..+|.+||+
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnn 120 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEEC
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEEC
Confidence 555554 368999997
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=3.8e-06 Score=89.67 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCCH-HHHHHHHHHHHCCCcEEEEE-eCCcchhh-------h---cCCceEEEEccCCCHHHHHHhhc--
Q 028418 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALV-KDKRNAME-------S---FGTYVESMAGDASNKKFLKTALR-- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGf-IG~~VV~~Ll~~G~~VraLv-R~~~~a~~-------~---~~~~vevv~GDl~D~~sL~~AL~-- 162 (209)
..++++|||||++. ||+++++.|+++|++|.++. |+..+... . .+..+.++.+|++|++++.++++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i 752 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 752 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence 34578999999998 99999999999999999984 66544321 1 14468899999999999988763
Q ss_pred -----------CCcEEEEc
Q 028418 163 -----------GVRSIICP 170 (209)
Q Consensus 163 -----------GvDaVIh~ 170 (209)
.+|.|||+
T Consensus 753 ~~~~~~~G~G~~LDiLVNN 771 (1887)
T 2uv8_A 753 YDTEKNGGLGWDLDAIIPF 771 (1887)
T ss_dssp HSCTTTTSCCCCCSEEEEC
T ss_pred HHhccccccCCCCeEEEEC
Confidence 48999998
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=7.7e-06 Score=89.15 Aligned_cols=73 Identities=14% Similarity=0.123 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchh-------h--hcCCceEEEEccCCCHHHHHHhhc-----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM-------E--SFGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~-------~--~~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
+.+++|||||+|.||+.+++.|.++|++ |.++.|+..+.. . ..+..+.++.+|++|++++.++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 5678999999999999999999999998 666778764321 1 124567889999999999887764
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
.+|.|||+
T Consensus 1963 g~id~lVnn 1971 (2512)
T 2vz8_A 1963 GPVGGVFNL 1971 (2512)
T ss_dssp SCEEEEEEC
T ss_pred CCCcEEEEC
Confidence 57999998
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.12 E-value=3.5e-06 Score=78.06 Aligned_cols=92 Identities=13% Similarity=0.133 Sum_probs=71.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHh-hcCCcEEEEcC--h-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPS--E- 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~- 172 (209)
..|+|+|.|+ |.+|++|++.|..+||+|+++.++++...... ..++.++.||.++++.|.+| ++.+|.+|.+. +
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De 80 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE 80 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence 4678999997 99999999999999999999999987765432 12578999999999999998 68899999772 2
Q ss_pred hH--HHHHHHh-CCCCEEEEe
Q 028418 173 GF--ISNAGSL-KGVQHVILL 190 (209)
Q Consensus 173 g~--ll~AA~~-aGVkriV~v 190 (209)
.+ ....|++ .+++++|-.
T Consensus 81 ~Nl~~~~~Ak~~~~~~~~iar 101 (461)
T 4g65_A 81 TNMAACQVAFTLFNTPNRIAR 101 (461)
T ss_dssp HHHHHHHHHHHHHCCSSEEEE
T ss_pred HHHHHHHHHHHhcCCccceeE
Confidence 22 2334555 377777654
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=2.8e-07 Score=74.67 Aligned_cols=70 Identities=11% Similarity=0.036 Sum_probs=50.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|+|+||+|++|+.+++.|+++|++|++..|++++....... +..+..+|+. ..++.++++++|.||++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~ 71 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLT 71 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEEC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEe
Confidence 4799999999999999999999999999999987665322110 0000001222 23567788999999998
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.06 E-value=9.4e-06 Score=77.45 Aligned_cols=100 Identities=9% Similarity=0.047 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhh---hcCCceEEEEccC-CCHHHHH-Hh---hcCCcEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME---SFGTYVESMAGDA-SNKKFLK-TA---LRGVRSI 167 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~---~~~~~vevv~GDl-~D~~sL~-~A---L~GvDaV 167 (209)
...+++|||||++.||+.++++|.++|++|.+..|+. +.... ..+..+..+..|+ .+.+.+- ++ +..+|.+
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL 399 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL 399 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence 4567899999999999999999999999999887643 22211 1234466677888 6655432 22 3478999
Q ss_pred EEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccc
Q 028418 168 ICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 168 Ih~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
|+.+ + |. ++...++.+-.+||++||....
T Consensus 400 VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~ 458 (604)
T 2et6_A 400 VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGI 458 (604)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence 9982 0 11 2344455666899999997543
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=8.3e-06 Score=72.93 Aligned_cols=87 Identities=18% Similarity=0.191 Sum_probs=55.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEe--CCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-hh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT---RIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR--~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~g 173 (209)
++|+|.||||.||+.+++.|++++| +++++.. +..+... +. +.++...|. |+ +++.++|+||.+. .+
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~~-g~~i~~~~~-~~----~~~~~~DvV~~a~g~~ 79 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FA-ESSLRVGDV-DS----FDFSSVGLAFFAAAAE 79 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ET-TEEEECEEG-GG----CCGGGCSEEEECSCHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-cC-CcceEEecC-CH----HHhcCCCEEEEcCCcH
Confidence 5799999999999999999997765 4566652 2211111 11 122222232 22 2367999999983 22
Q ss_pred H---HHHHHHhCCCCEEEEecccc
Q 028418 174 F---ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 174 ~---ll~AA~~aGVkriV~vSS~~ 194 (209)
. ++.++.++|++ +|.+|+..
T Consensus 80 ~s~~~a~~~~~aG~k-vId~Sa~~ 102 (340)
T 2hjs_A 80 VSRAHAERARAAGCS-VIDLSGAL 102 (340)
T ss_dssp HHHHHHHHHHHTTCE-EEETTCTT
T ss_pred HHHHHHHHHHHCCCE-EEEeCCCC
Confidence 2 67777889986 77777653
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.9e-05 Score=73.26 Aligned_cols=72 Identities=18% Similarity=0.214 Sum_probs=58.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEeCCcchh------------------hhcCCceEEEEccCCCHHHHHH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR~~~~a~------------------~~~~~~vevv~GDl~D~~sL~~ 159 (209)
.+++|||||++.||+.+++.|.+ +|++|.++.|+.+... ...+..+..+.+|++|++.+.+
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 140 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ 140 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 56999999999999999999999 9999999998765321 1234567889999999998776
Q ss_pred hh--------cCCcEEEEc
Q 028418 160 AL--------RGVRSIICP 170 (209)
Q Consensus 160 AL--------~GvDaVIh~ 170 (209)
++ -.+|.+|+.
T Consensus 141 ~v~~i~~~~~G~IDiLVNN 159 (422)
T 3s8m_A 141 VIELIKTEMGGQVDLVVYS 159 (422)
T ss_dssp HHHHHHHHSCSCEEEEEEC
T ss_pred HHHHHHHHcCCCCCEEEEc
Confidence 65 357999986
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1e-05 Score=86.33 Aligned_cols=74 Identities=12% Similarity=0.165 Sum_probs=59.6
Q ss_pred CCCCeEEEEcCCCH-HHHHHHHHHHHCCCcEEEEE-eCCcchh-------hhc---CCceEEEEccCCCHHHHHHhhc--
Q 028418 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALV-KDKRNAM-------ESF---GTYVESMAGDASNKKFLKTALR-- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGf-IG~~VV~~Ll~~G~~VraLv-R~~~~a~-------~~~---~~~vevv~GDl~D~~sL~~AL~-- 162 (209)
..++++|||||+|. ||+++++.|+++|++|.++. |+..... ..+ +..+.++.+|++|++.+.++++
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i 729 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI 729 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 34578999999999 99999999999999999885 5554321 111 4468899999999999988763
Q ss_pred ---------CCcEEEEc
Q 028418 163 ---------GVRSIICP 170 (209)
Q Consensus 163 ---------GvDaVIh~ 170 (209)
.+|+|||+
T Consensus 730 ~~~~~~~G~~IDiLVnN 746 (1878)
T 2uv9_A 730 YDTKNGLGWDLDYVVPF 746 (1878)
T ss_dssp HCSSSSCCCCCSEEEEC
T ss_pred HHhhcccCCCCcEEEeC
Confidence 48999998
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=1.9e-05 Score=73.06 Aligned_cols=72 Identities=17% Similarity=0.243 Sum_probs=59.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEeCCcchh------------------hhcCCceEEEEccCCCHHHHHH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR~~~~a~------------------~~~~~~vevv~GDl~D~~sL~~ 159 (209)
.+++|||||++.||+.+++.|.+ +|++|.++.|+.+... ...+..+..+.+|++|++.+.+
T Consensus 47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 126 (405)
T 3zu3_A 47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQL 126 (405)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 57899999999999999999999 9999999988764321 1224557889999999998887
Q ss_pred hhc-------CCcEEEEc
Q 028418 160 ALR-------GVRSIICP 170 (209)
Q Consensus 160 AL~-------GvDaVIh~ 170 (209)
+++ .+|.+|+.
T Consensus 127 ~v~~i~~~~G~IDiLVNN 144 (405)
T 3zu3_A 127 TIDAIKQDLGQVDQVIYS 144 (405)
T ss_dssp HHHHHHHHTSCEEEEEEC
T ss_pred HHHHHHHHcCCCCEEEEc
Confidence 764 57999986
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.8e-05 Score=68.14 Aligned_cols=70 Identities=14% Similarity=0.197 Sum_probs=52.3
Q ss_pred CCCeEEEEcC----------------CCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHH---
Q 028418 98 ARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK--- 158 (209)
Q Consensus 98 ~~~~ILVTGA----------------TGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~--- 158 (209)
.+++|||||| ||.+|..+++.|+.+|++|..+.|+..... ..+.+++++ |+.....+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~~~~~~~~--~v~s~~em~~~v 78 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-EPHPNLSIR--EITNTKDLLIEM 78 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CCCTTEEEE--ECCSHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-cCCCCeEEE--EHhHHHHHHHHH
Confidence 3679999999 999999999999999999999999764321 113356655 455554444
Q ss_pred -HhhcCCcEEEEc
Q 028418 159 -TALRGVRSIICP 170 (209)
Q Consensus 159 -~AL~GvDaVIh~ 170 (209)
+.+.++|.+|++
T Consensus 79 ~~~~~~~Dili~a 91 (232)
T 2gk4_A 79 QERVQDYQVLIHS 91 (232)
T ss_dssp HHHGGGCSEEEEC
T ss_pred HHhcCCCCEEEEc
Confidence 445689999998
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.97 E-value=6e-06 Score=74.56 Aligned_cols=87 Identities=14% Similarity=0.074 Sum_probs=57.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC------CcEEEEEeCCc--c-hhhhcC-----CceEEEEccCCCHHHHHHhhcCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR------TRIKALVKDKR--N-AMESFG-----TYVESMAGDASNKKFLKTALRGV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G------~~VraLvR~~~--~-a~~~~~-----~~vevv~GDl~D~~sL~~AL~Gv 164 (209)
+++|+|.||||.+|+.+++.|++++ .+++++.+... + .....+ ..+.+ .|+ ++ +++.++
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~~----~~~~~~ 81 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-EA----AVLGGH 81 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-CH----HHHTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-CH----HHhcCC
Confidence 4589999999999999999999877 47888875332 2 111111 11222 232 33 346799
Q ss_pred cEEEEcC-h---hHHHHHHHhCCCCEEEEecccc
Q 028418 165 RSIICPS-E---GFISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 165 DaVIh~a-~---g~ll~AA~~aGVkriV~vSS~~ 194 (209)
|+||++. . ..+++++ ++|+ ++|-+|+..
T Consensus 82 DvVf~alg~~~s~~~~~~~-~~G~-~vIDlSa~~ 113 (352)
T 2nqt_A 82 DAVFLALPHGHSAVLAQQL-SPET-LIIDCGADF 113 (352)
T ss_dssp SEEEECCTTSCCHHHHHHS-CTTS-EEEECSSTT
T ss_pred CEEEECCCCcchHHHHHHH-hCCC-EEEEECCCc
Confidence 9999982 2 2377788 8885 688888754
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.94 E-value=7.6e-06 Score=86.18 Aligned_cols=74 Identities=16% Similarity=0.217 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCCCH-HHHHHHHHHHHCCCcEEEEE-eCCcchh---hhc-------CCceEEEEccCCCHHHHHHhhc--
Q 028418 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALV-KDKRNAM---ESF-------GTYVESMAGDASNKKFLKTALR-- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGf-IG~~VV~~Ll~~G~~VraLv-R~~~~a~---~~~-------~~~vevv~GDl~D~~sL~~AL~-- 162 (209)
...+++|||||+|. ||++++++|+++|++|.++. |+.++.. ... +..+.++.+|++|++++.++++
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I 553 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 553 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 34578999999998 99999999999999999984 6554332 111 3457889999999999988763
Q ss_pred -----------CCcEEEEc
Q 028418 163 -----------GVRSIICP 170 (209)
Q Consensus 163 -----------GvDaVIh~ 170 (209)
.+|.|||+
T Consensus 554 ~e~~~~~GfG~~IDILVNN 572 (1688)
T 2pff_A 554 YDTEKNGGLGWDLDAIIPF 572 (1688)
T ss_dssp HSCTTSSSCCCCCCEEECC
T ss_pred HHhccccccCCCCeEEEEC
Confidence 48999998
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.3e-05 Score=70.02 Aligned_cols=94 Identities=14% Similarity=0.059 Sum_probs=62.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-----CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-----GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-----GvDaVIh~a 171 (209)
.+.++|||+||+|.||..+++.+...|++|.+++|++++.......+.+.+ .|+.+.+.+.++++ ++|.||.+.
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 246 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVF-IDFTKEKDIVGAVLKATDGGAHGVINVS 246 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEE-EETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceE-EecCccHhHHHHHHHHhCCCCCEEEECC
Confidence 456799999999999999999999999999999998876532211123322 37664333333332 799999883
Q ss_pred -hhHHHHH----HHhCCCCEEEEeccc
Q 028418 172 -EGFISNA----GSLKGVQHVILLSQR 193 (209)
Q Consensus 172 -~g~ll~A----A~~aGVkriV~vSS~ 193 (209)
....++. ++.. .++|.+++.
T Consensus 247 g~~~~~~~~~~~l~~~--G~iv~~g~~ 271 (347)
T 2hcy_A 247 VSEAAIEASTRYVRAN--GTTVLVGMP 271 (347)
T ss_dssp SCHHHHHHHTTSEEEE--EEEEECCCC
T ss_pred CcHHHHHHHHHHHhcC--CEEEEEeCC
Confidence 2122322 2223 478888764
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.89 E-value=4.4e-05 Score=68.12 Aligned_cols=87 Identities=11% Similarity=0.108 Sum_probs=56.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC---CcEEEEEe--CCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-h
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-E 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G---~~VraLvR--~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~ 172 (209)
+++|+|.||||.||+.+++.|.+++ .+++++.. +..+.....+ .++...|+ |+ +.+.++|.||.+. .
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~--~~i~~~~~-~~----~~~~~vDvVf~a~g~ 75 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNG--KTVRVQNV-EE----FDWSQVHIALFSAGG 75 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETT--EEEEEEEG-GG----CCGGGCSEEEECSCH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecC--ceeEEecC-Ch----HHhcCCCEEEECCCc
Confidence 5689999999999999999999873 56888873 2212111111 22222232 22 2457999999883 2
Q ss_pred hH---HHHHHHhCCCCEEEEeccc
Q 028418 173 GF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g~---ll~AA~~aGVkriV~vSS~ 193 (209)
+. .+.++.++|+ ++|-+|+.
T Consensus 76 ~~s~~~a~~~~~~G~-~vId~s~~ 98 (336)
T 2r00_A 76 ELSAKWAPIAAEAGV-VVIDNTSH 98 (336)
T ss_dssp HHHHHHHHHHHHTTC-EEEECSST
T ss_pred hHHHHHHHHHHHcCC-EEEEcCCc
Confidence 22 6677788897 57777775
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.87 E-value=6.7e-06 Score=70.98 Aligned_cols=93 Identities=8% Similarity=0.039 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHH---HHhh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL---KTAL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL---~~AL--~GvDaVIh~a~ 172 (209)
+.++||||||+|.||..+++.+...|++|.+++|++++.......+.+. ..|..+.+.. .+.. .++|.||.+.-
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g 218 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ-VINYREEDLVERLKEITGGKKVRVVYDSVG 218 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence 5679999999999999999999999999999999876543221111222 2366554433 3333 26899999832
Q ss_pred hH----HHHHHHhCCCCEEEEeccc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS~ 193 (209)
+. .+++.+.. .++|.+++.
T Consensus 219 ~~~~~~~~~~l~~~--G~iv~~g~~ 241 (327)
T 1qor_A 219 RDTWERSLDCLQRR--GLMVSFGNS 241 (327)
T ss_dssp GGGHHHHHHTEEEE--EEEEECCCT
T ss_pred hHHHHHHHHHhcCC--CEEEEEecC
Confidence 32 33333333 478888764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.87 E-value=5.3e-05 Score=72.27 Aligned_cols=98 Identities=12% Similarity=0.013 Sum_probs=63.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC---------cchhh---hc-CCceEEEEccCCCHHHHHHh----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAME---SF-GTYVESMAGDASNKKFLKTA---- 160 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~---------~~a~~---~~-~~~vevv~GDl~D~~sL~~A---- 160 (209)
..+++|||||++.||+.++++|.++|++|.+..|+. +.+.. .. ..+.+ +..|+.|.+.++++
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v~~~ 85 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIVETA 85 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHHHHH
Confidence 457899999999999999999999999999987754 22211 11 11112 23566666433222
Q ss_pred ---hcCCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccc
Q 028418 161 ---LRGVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 161 ---L~GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+..+|.+|+.+ .|. ++..+++.+-.+||++||....
T Consensus 86 ~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~ 154 (604)
T 2et6_A 86 VKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGL 154 (604)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence 34789999882 011 2344455566799999997543
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.86 E-value=2.3e-05 Score=70.19 Aligned_cols=88 Identities=8% Similarity=-0.003 Sum_probs=56.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
+++|.|.||||.||+.+++.|.++. .+++++.+..+..... .+ .+. ....+.+.+ .+.++|+||.+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~--~~~~~~~~~----~~~~vDvV~~a~g 77 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGR--TNLKFVPPE----KLEPADILVLALP 77 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTT--CCCBCBCGG----GCCCCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCc--ccccccchh----HhcCCCEEEEcCC
Confidence 4689999999999999999998765 4888887644322111 10 000 011123332 258999999982
Q ss_pred hhH---HHHHHHhCCCCEEEEeccc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
.+. ++.++.++|++ +|-+|+.
T Consensus 78 ~~~s~~~a~~~~~aG~~-VId~Sa~ 101 (345)
T 2ozp_A 78 HGVFAREFDRYSALAPV-LVDLSAD 101 (345)
T ss_dssp TTHHHHTHHHHHTTCSE-EEECSST
T ss_pred cHHHHHHHHHHHHCCCE-EEEcCcc
Confidence 222 56677788974 8888874
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=3.1e-05 Score=63.96 Aligned_cols=63 Identities=11% Similarity=0.159 Sum_probs=50.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|+|+| +|.+|+.+++.|...|++|++..|++++.......++.+. ++.++++++|.||.+
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVA 90 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEEC
Confidence 46899999 8999999999999999999999998876654433344432 356788999999987
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.1e-05 Score=70.05 Aligned_cols=92 Identities=12% Similarity=0.157 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--hcCCceEEEEccCCCHH---HHHHhh--cCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTAL--RGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh 169 (209)
.+.++||||||+|.||..+++.+...|++|.+++|++++... .++ .+. ..|..+.+ .+.+.. .++|.||.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g--~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~ 220 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLG--CHH-TINYSTQDFAEVVREITGGKGVDVVYD 220 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT--CSE-EEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CCE-EEECCCHHHHHHHHHHhCCCCCeEEEE
Confidence 356799999999999999999999999999999998755432 233 222 23565543 333333 37999999
Q ss_pred cC-hhH---HHHHHHhCCCCEEEEeccc
Q 028418 170 PS-EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 170 ~a-~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
++ ... .++..+..| ++|.++..
T Consensus 221 ~~g~~~~~~~~~~l~~~G--~iv~~g~~ 246 (333)
T 1wly_A 221 SIGKDTLQKSLDCLRPRG--MCAAYGHA 246 (333)
T ss_dssp CSCTTTHHHHHHTEEEEE--EEEECCCT
T ss_pred CCcHHHHHHHHHhhccCC--EEEEEecC
Confidence 83 222 333333333 78877654
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.6e-05 Score=69.26 Aligned_cols=94 Identities=12% Similarity=0.109 Sum_probs=63.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEcCh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPSE 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~a~ 172 (209)
+.++|||+||+|.||..+++.+...|++|.+++|++++.......+.+.+ .|..+.+ .+.++. .++|.||.+.-
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 244 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADET-VNYTHPDWPKEVRRLTGGKGADKVVDHTG 244 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEE-EETTSTTHHHHHHHHTTTTCEEEEEESSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEE-EcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence 56799999999999999999999999999999998765432211122222 3665543 344444 37899999821
Q ss_pred h----HHHHHHHhCCCCEEEEecccc
Q 028418 173 G----FISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 173 g----~ll~AA~~aGVkriV~vSS~~ 194 (209)
+ ..+++++..| ++|.+++..
T Consensus 245 ~~~~~~~~~~l~~~G--~~v~~g~~~ 268 (343)
T 2eih_A 245 ALYFEGVIKATANGG--RIAIAGASS 268 (343)
T ss_dssp SSSHHHHHHHEEEEE--EEEESSCCC
T ss_pred HHHHHHHHHhhccCC--EEEEEecCC
Confidence 2 2455555545 888887653
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.79 E-value=2e-05 Score=70.46 Aligned_cols=91 Identities=12% Similarity=0.147 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICPS-- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-- 171 (209)
.+.++|+|+|+ |.||+.+++.|...|++|.+..|++++... .++.. +..|..+.+.+.++++++|.||++.
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 34579999999 999999999999999999999998865432 23322 4567788899999999999999882
Q ss_pred hh--H-------HHHHHHhCCCCEEEEeccc
Q 028418 172 EG--F-------ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g--~-------ll~AA~~aGVkriV~vSS~ 193 (209)
.. + .++.++. | ..||.+|+.
T Consensus 240 ~~~~~~~li~~~~l~~mk~-g-g~iV~v~~~ 268 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKE-G-AVIVDVAVD 268 (369)
T ss_dssp ------CCSCHHHHTTSCT-T-CEEEECC--
T ss_pred CccccchhHHHHHHHhhcC-C-CEEEEEecC
Confidence 21 1 2333332 2 578888864
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=8.9e-05 Score=65.48 Aligned_cols=92 Identities=10% Similarity=0.068 Sum_probs=66.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhcCCcEEEEcC--h--
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS--E-- 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a--~-- 172 (209)
+.++|||+|+ |.||..+++.+...|.+|.++++++++..... ..+++. ..|..+.+.+.++..++|.||.+. .
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~g~~~~ 264 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTVSAVHP 264 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECCSSCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECCCcHHH
Confidence 6789999996 99999999999999999999998887653321 222332 246778888888888999999882 1
Q ss_pred -hHHHHHHHhCCCCEEEEeccc
Q 028418 173 -GFISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 -g~ll~AA~~aGVkriV~vSS~ 193 (209)
...+++.+..| ++|.+++.
T Consensus 265 ~~~~~~~l~~~G--~iv~~g~~ 284 (366)
T 1yqd_A 265 LLPLFGLLKSHG--KLILVGAP 284 (366)
T ss_dssp SHHHHHHEEEEE--EEEECCCC
T ss_pred HHHHHHHHhcCC--EEEEEccC
Confidence 12455554444 78888764
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=2.3e-05 Score=67.74 Aligned_cols=95 Identities=14% Similarity=0.067 Sum_probs=61.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-----cCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-----~GvDaVIh~a 171 (209)
.+.++||||||+|.||..+++.+...|++|.+++|++++.......+.+. ..|..+.+.+.+++ .++|.||+++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 222 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDA-AFNYKTVNSLEEALKKASPDGYDCYFDNV 222 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcE-EEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 35679999999999999999999999999999998876543221112222 24666622233322 2689999984
Q ss_pred hhHHHHH----HHhCCCCEEEEecccc
Q 028418 172 EGFISNA----GSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 ~g~ll~A----A~~aGVkriV~vSS~~ 194 (209)
-+..++. .+.. .++|.++...
T Consensus 223 g~~~~~~~~~~l~~~--G~~v~~g~~~ 247 (333)
T 1v3u_A 223 GGEFLNTVLSQMKDF--GKIAICGAIS 247 (333)
T ss_dssp CHHHHHHHHTTEEEE--EEEEECCCCC
T ss_pred ChHHHHHHHHHHhcC--CEEEEEeccc
Confidence 2222222 2222 4788877643
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=2e-05 Score=68.28 Aligned_cols=94 Identities=12% Similarity=0.072 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHH----HHHHhh-cCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKK----FLKTAL-RGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~----sL~~AL-~GvDaVIh~ 170 (209)
.+.++|||+||+|.||..+++.+...|++|.+++|++++..... ..+++.+ .|..+.+ .+.+.. .++|.||.+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDA-FNYKEESDLTAALKRCFPNGIDIYFEN 232 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEE-EETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceE-EecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence 35679999999999999999999999999999999876643221 1123222 2655432 333322 379999998
Q ss_pred ChhHHHHH----HHhCCCCEEEEeccc
Q 028418 171 SEGFISNA----GSLKGVQHVILLSQR 193 (209)
Q Consensus 171 a~g~ll~A----A~~aGVkriV~vSS~ 193 (209)
.-+..++. .+.. .++|.++..
T Consensus 233 ~g~~~~~~~~~~l~~~--G~~v~~G~~ 257 (345)
T 2j3h_A 233 VGGKMLDAVLVNMNMH--GRIAVCGMI 257 (345)
T ss_dssp SCHHHHHHHHTTEEEE--EEEEECCCG
T ss_pred CCHHHHHHHHHHHhcC--CEEEEEccc
Confidence 32222222 2222 478877654
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.73 E-value=5e-05 Score=68.40 Aligned_cols=87 Identities=11% Similarity=0.139 Sum_probs=57.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhh---h---cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAME---S---FGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~---~---~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
.+|+|.||||.||+.+++.|.++. .+++++.+..+.... . +...+ ..|+.-.+ .+.++++|+||.+.
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf~atp 91 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVSVK--DADFSTVDAVFCCLP 91 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC---CCCCBCGG--GCCGGGCSEEEECCC
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc---cccceecc--hhHhcCCCEEEEcCC
Confidence 589999999999999999998875 488888864322211 1 11111 13433222 44567999999983
Q ss_pred hhH---HHHHHHhCCCCEEEEeccc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
.++ .+.++ ++|+ ++|-+|+.
T Consensus 92 ~~~s~~~a~~~-~aG~-~VId~sa~ 114 (359)
T 1xyg_A 92 HGTTQEIIKEL-PTAL-KIVDLSAD 114 (359)
T ss_dssp TTTHHHHHHTS-CTTC-EEEECSST
T ss_pred chhHHHHHHHH-hCCC-EEEECCcc
Confidence 232 66667 7887 58877774
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00017 Score=61.80 Aligned_cols=69 Identities=10% Similarity=0.091 Sum_probs=53.5
Q ss_pred CCCCeEEEEcC----------------CCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh
Q 028418 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160 (209)
Q Consensus 97 ~~~~~ILVTGA----------------TGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A 160 (209)
...++|||||| ||.+|..++++|.++|++|.++.|+... . .+.+++ ..|+.+...+.++
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~--~~~g~~--~~dv~~~~~~~~~ 80 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P--TPPFVK--RVDVMTALEMEAA 80 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C--CCTTEE--EEECCSHHHHHHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c--cCCCCe--EEccCcHHHHHHH
Confidence 45789999999 7999999999999999999998876531 1 123344 4588887766555
Q ss_pred h----cCCcEEEEc
Q 028418 161 L----RGVRSIICP 170 (209)
Q Consensus 161 L----~GvDaVIh~ 170 (209)
+ .++|.+|++
T Consensus 81 v~~~~~~~Dili~~ 94 (226)
T 1u7z_A 81 VNASVQQQNIFIGC 94 (226)
T ss_dssp HHHHGGGCSEEEEC
T ss_pred HHHhcCCCCEEEEC
Confidence 4 579999998
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00016 Score=67.39 Aligned_cols=84 Identities=14% Similarity=0.168 Sum_probs=66.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEcC--h-hH-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS--E-GF- 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~-g~- 174 (209)
+.|+|.|+ |.+|+++++.|.++|++|+++.++++...... .++.||.+|++.|++| ++.+|+||.+. + .+
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~----~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni 423 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCNDH----VVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNI 423 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS----CEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHH
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhcC----CEEEeCCCCHHHHHhcCccccCEEEEECCCchHHH
Confidence 78999998 99999999999999999999999998765432 7899999999999977 57899999872 1 12
Q ss_pred -HHHHHHhCCCC-EEE
Q 028418 175 -ISNAGSLKGVQ-HVI 188 (209)
Q Consensus 175 -ll~AA~~aGVk-riV 188 (209)
+...|++.+++ ++|
T Consensus 424 ~~~~~ak~l~~~~~ii 439 (565)
T 4gx0_A 424 FLTLACRHLHSHIRIV 439 (565)
T ss_dssp HHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHCCCCEEE
Confidence 33445555555 444
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=1.5e-05 Score=71.29 Aligned_cols=92 Identities=17% Similarity=0.113 Sum_probs=59.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC--c-----EEEEEeCCc--ch----hhhcCCceEEEEccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT--R-----IKALVKDKR--NA----MESFGTYVESMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~--~-----VraLvR~~~--~a----~~~~~~~vevv~GDl~D~~sL~~AL~GvDa 166 (209)
++|+||||+|+||++++..|+..+. + ++.+++++. ++ ..+......+. .++.......++++|+|.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~~~~~~~~daDv 82 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATDKEEIAFKDLDV 82 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEESCHHHHTTTCSE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcCCcHHHhCCCCE
Confidence 5899999999999999999988775 5 888887642 21 11111000001 122223345788999999
Q ss_pred EEEcC-----hh---------------HHHHHHHhCCCC--EEEEecc
Q 028418 167 IICPS-----EG---------------FISNAGSLKGVQ--HVILLSQ 192 (209)
Q Consensus 167 VIh~a-----~g---------------~ll~AA~~aGVk--riV~vSS 192 (209)
||+++ .| .+++++++.+.+ +|+.+|-
T Consensus 83 VvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 83 AILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp EEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 99982 11 167788888876 5666663
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.69 E-value=8.3e-05 Score=66.43 Aligned_cols=90 Identities=14% Similarity=0.107 Sum_probs=55.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchh----hhcCCceE----EEEccC----CCHHHHHHhhc-CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM----ESFGTYVE----SMAGDA----SNKKFLKTALR-GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~----~~~~~~ve----vv~GDl----~D~~sL~~AL~-GvD 165 (209)
++|.|.||||.||+.+++.|.++. .+|+++.|+++.+. ...+...+ .-..|+ .|++ +.++ ++|
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D 85 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPK---HEEFEDVD 85 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTT---SGGGTTCC
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHH---HHhcCCCC
Confidence 479999999999999999988764 68888987543221 11111000 000111 1322 2346 999
Q ss_pred EEEEcC-hhH---HHHHHHhCCCCEEEEeccc
Q 028418 166 SIICPS-EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 166 aVIh~a-~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
+||.+. .+. ++.++.++|++ +|-.|+.
T Consensus 86 vV~~atp~~~~~~~a~~~~~aG~~-VId~s~~ 116 (354)
T 1ys4_A 86 IVFSALPSDLAKKFEPEFAKEGKL-IFSNASA 116 (354)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCE-EEECCST
T ss_pred EEEECCCchHHHHHHHHHHHCCCE-EEECCch
Confidence 999983 222 66677788876 7766654
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=4.1e-05 Score=67.58 Aligned_cols=95 Identities=16% Similarity=0.134 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh-cCCcEEEEcCh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL-RGVRSIICPSE 172 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL-~GvDaVIh~a~ 172 (209)
.+.++|||+||+|.||..+++.+...|++|.+++|++++.......+++.+ .|..+.+ .+.+.. .|+|.||.+.-
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRP-INYKTEPVGTVLKQEYPEGVDVVYESVG 240 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHCTTCEEEEEECSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEE-EecCChhHHHHHHHhcCCCCCEEEECCC
Confidence 456799999999999999999999999999999998765432211123222 2443322 222222 37999999832
Q ss_pred hH----HHHHHHhCCCCEEEEecccc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS~~ 194 (209)
+. .+++++..| ++|.+++..
T Consensus 241 ~~~~~~~~~~l~~~G--~iv~~g~~~ 264 (362)
T 2c0c_A 241 GAMFDLAVDALATKG--RLIVIGFIS 264 (362)
T ss_dssp THHHHHHHHHEEEEE--EEEECCCGG
T ss_pred HHHHHHHHHHHhcCC--EEEEEeCCC
Confidence 22 344444444 888887754
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00021 Score=61.47 Aligned_cols=94 Identities=11% Similarity=0.090 Sum_probs=63.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-----cCCcEEEEcC--
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICPS-- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-----~GvDaVIh~a-- 171 (209)
++|+|.||+|.+|+.+++.+.+. ++++++.+.............++ +..|++.|+.+.+.+ .|++.|+.+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 47999999999999999998865 89999888654433322222344 677899888776544 3888888651
Q ss_pred -hh---HHHHHHHhC-CCCEEEEeccccc
Q 028418 172 -EG---FISNAGSLK-GVQHVILLSQRQR 195 (209)
Q Consensus 172 -~g---~ll~AA~~a-GVkriV~vSS~~V 195 (209)
.. .+.++|++. ++ .+||.+..++
T Consensus 80 ~~e~~~~l~~aa~~~~~~-~vv~a~N~si 107 (245)
T 1p9l_A 80 TAERFQQVESWLVAKPNT-SVLIAPNFAI 107 (245)
T ss_dssp CHHHHHHHHHHHHTSTTC-EEEECSCCCH
T ss_pred CHHHHHHHHHHHHhCCCC-CEEEECCccH
Confidence 11 145556655 54 4666665443
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.63 E-value=6.6e-05 Score=66.10 Aligned_cols=93 Identities=14% Similarity=0.094 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHH---HHHhhc--CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF---LKTALR--GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~s---L~~AL~--GvDaVIh~a 171 (209)
.+.++|||+||+|.||..+++.+...|++|.+++|++++.......+.+. ..|..+.+. +.+... ++|.||.+.
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 247 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEML 247 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence 35679999999999999999999999999999999876543221112222 235655443 333333 799999984
Q ss_pred hhH----HHHHHHhCCCCEEEEecc
Q 028418 172 EGF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~----ll~AA~~aGVkriV~vSS 192 (209)
-+. .++..+.. .++|.++.
T Consensus 248 G~~~~~~~~~~l~~~--G~iv~~g~ 270 (351)
T 1yb5_A 248 ANVNLSKDLSLLSHG--GRVIVVGS 270 (351)
T ss_dssp HHHHHHHHHHHEEEE--EEEEECCC
T ss_pred ChHHHHHHHHhccCC--CEEEEEec
Confidence 222 23333333 47777664
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=6.2e-05 Score=65.12 Aligned_cols=95 Identities=13% Similarity=0.127 Sum_probs=62.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHh---h-cCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTA---L-RGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~A---L-~GvDaVIh~a 171 (209)
.+.++|||+||+|.||..+++.+...|++|.+++|++++.... ...+++. ..|..+.+..... . .++|.||.+.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHHHhcCCCceEEEECC
Confidence 3577999999999999999999999999999999988765433 2222322 2355554433322 2 3799999883
Q ss_pred hhHHH----HHHHhCCCCEEEEecccc
Q 028418 172 EGFIS----NAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 ~g~ll----~AA~~aGVkriV~vSS~~ 194 (209)
-+..+ +..+.. .++|.++...
T Consensus 227 g~~~~~~~~~~l~~~--G~iv~~G~~~ 251 (336)
T 4b7c_A 227 GGEILDTVLTRIAFK--ARIVLCGAIS 251 (336)
T ss_dssp CHHHHHHHHTTEEEE--EEEEECCCGG
T ss_pred CcchHHHHHHHHhhC--CEEEEEeecc
Confidence 22222 222222 4788877654
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=1.6e-05 Score=69.12 Aligned_cols=87 Identities=11% Similarity=0.123 Sum_probs=50.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEe-CCcchh-hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--hh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVK-DKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--EG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR-~~~~a~-~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a--~g 173 (209)
+++|+|+|+||++|+.+++.+.+ .+++++++++ ++++.. ...+.-..+-..++...+.+.+++.++|+||.++ ..
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~p~~ 84 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEG 84 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCHHH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCChHH
Confidence 36899999999999999998874 6889886664 332210 0000000000011111122345667889988652 11
Q ss_pred --HHHHHHHhCCCC
Q 028418 174 --FISNAGSLKGVQ 185 (209)
Q Consensus 174 --~ll~AA~~aGVk 185 (209)
..+.+|.++|+.
T Consensus 85 ~~~~~~~a~~~G~~ 98 (273)
T 1dih_A 85 TLNHLAFCRQHGKG 98 (273)
T ss_dssp HHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhCCCC
Confidence 256677777765
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.58 E-value=7.6e-05 Score=63.77 Aligned_cols=93 Identities=11% Similarity=0.068 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcChhH--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-- 174 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a~g~-- 174 (209)
.+.++|||+||+|.+|..+++.+...|.+|.+++|++++.......+++.+ .|..+.+.+.+.++++|.||. .-+.
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~-~~~~~~~~~~~~~~~~d~vid-~g~~~~ 201 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLE-VRGKEV 201 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEE-CSCTTH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEE-EECCcchhHHHHhcCceEEEE-CCHHHH
Confidence 457899999999999999999999999999999998776532211223322 355551334555689999998 5322
Q ss_pred --HHHHHHhCCCCEEEEeccc
Q 028418 175 --ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 --ll~AA~~aGVkriV~vSS~ 193 (209)
.+++.+.. .++|.++..
T Consensus 202 ~~~~~~l~~~--G~~v~~g~~ 220 (302)
T 1iz0_A 202 EESLGLLAHG--GRLVYIGAA 220 (302)
T ss_dssp HHHHTTEEEE--EEEEEC---
T ss_pred HHHHHhhccC--CEEEEEeCC
Confidence 22223333 377777653
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00041 Score=64.13 Aligned_cols=93 Identities=17% Similarity=0.252 Sum_probs=72.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCceEEEEccCCCHHHHHHh-hcCCcEEEEcC-
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTA-LRGVRSIICPS- 171 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a- 171 (209)
..+.++|+|.| .|.||.++++.| +++++|+++-++++++..+. -+++.++.||.+|++.|.++ +..+|+++.+.
T Consensus 232 ~~~~~~v~I~G-gG~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~ 309 (461)
T 4g65_A 232 EKPYRRIMIVG-GGNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTN 309 (461)
T ss_dssp GSCCCEEEEEC-CSHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred cccccEEEEEc-chHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEccc
Confidence 34556788877 689999999876 66799999999988765321 14678999999999999977 78999999882
Q ss_pred --hhH--HHHHHHhCCCCEEEEe
Q 028418 172 --EGF--ISNAGSLKGVQHVILL 190 (209)
Q Consensus 172 --~g~--ll~AA~~aGVkriV~v 190 (209)
+-+ ..-.|++.|++|+|-.
T Consensus 310 ~De~Ni~~~llAk~~gv~kvIa~ 332 (461)
T 4g65_A 310 EDETNIMSAMLAKRMGAKKVMVL 332 (461)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcHHHHHHHHHHHHcCCcccccc
Confidence 223 3345789999998864
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0004 Score=63.10 Aligned_cols=86 Identities=17% Similarity=0.206 Sum_probs=53.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCc---EEEEEeCCc--chhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-hh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~---VraLvR~~~--~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~g 173 (209)
.+|.|.||||++|+.+++.|.+++++ ++.+.-..+ +... +. +.+...-++.. +.+.++|.||.+. .+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~~-~~~~~~~~~~~-----~~~~~~Dvvf~a~~~~ 75 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FK-DQDITIEETTE-----TAFEGVDIALFSAGSS 75 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-ET-TEEEEEEECCT-----TTTTTCSEEEECSCHH
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-ec-CCCceEeeCCH-----HHhcCCCEEEECCChH
Confidence 58999999999999999988887664 444442111 1111 11 12333333321 2368999999873 22
Q ss_pred H---HHHHHHhCCCCEEEEeccc
Q 028418 174 F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 ~---ll~AA~~aGVkriV~vSS~ 193 (209)
. ++..+.++|+ ++|=+|+.
T Consensus 76 ~s~~~a~~~~~~G~-~vIDlSa~ 97 (366)
T 3pwk_A 76 TSAKYAPYAVKAGV-VVVDNTSY 97 (366)
T ss_dssp HHHHHHHHHHHTTC-EEEECSST
T ss_pred hHHHHHHHHHHCCC-EEEEcCCc
Confidence 2 5666678897 57777764
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=4.7e-05 Score=67.07 Aligned_cols=67 Identities=21% Similarity=0.259 Sum_probs=48.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh--hhcCC----ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGT----YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~--~~~~~----~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|+||+|++|..++..|+.++ ++|+++++++.+.. .+... .++...+ ...+++|++|+|.||++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~~~aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG----PEQLPDCLKGCDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES----GGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecC----CCCHHHHhCCCCEEEEC
Confidence 589999999999999999999888 78999998873221 11111 1221111 23578899999999998
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00043 Score=62.17 Aligned_cols=90 Identities=14% Similarity=0.057 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEeCC---cc---hhhh---cCC--ceEEEEccCCCHHHHHHhhcCCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDK---RN---AMES---FGT--YVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR~~---~~---a~~~---~~~--~vevv~GDl~D~~sL~~AL~GvD 165 (209)
+|++|.|.||||++|+.+++.|.+ ..+++.++.++. +. .... +.. ...+... .|++ +.++++|
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~D 77 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVD 77 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCS
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCC
Confidence 467899999999999999999888 567898887544 21 1111 111 1222211 0222 2238999
Q ss_pred EEEEc-ChhH---HHHHHHhCCCCEEEEeccc
Q 028418 166 SIICP-SEGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 166 aVIh~-a~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
.||.+ ..+. ++..+.++|++ +|=+|+.
T Consensus 78 vvf~a~p~~~s~~~~~~~~~~g~~-vIDlSa~ 108 (337)
T 3dr3_A 78 VVFLATAHEVSHDLAPQFLEAGCV-VFDLSGA 108 (337)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCE-EEECSST
T ss_pred EEEECCChHHHHHHHHHHHHCCCE-EEEcCCc
Confidence 99988 3332 56667788875 6667764
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00046 Score=62.46 Aligned_cols=88 Identities=15% Similarity=0.113 Sum_probs=54.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH-CCC---cEEEEEeCCcchhhh--cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV-KRT---RIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~-~G~---~VraLvR~~~~a~~~--~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
|++|.|.||||+||+.++++|++ +++ .++.+..+ +.-... +. +.++...|..|++. ++++|.||.+.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~-s~G~~v~~~~-g~~i~~~~~~~~~~----~~~~DvVf~a~g 74 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS-QLGQAAPSFG-GTTGTLQDAFDLEA----LKALDIIVTCQG 74 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-STTSBCCGGG-TCCCBCEETTCHHH----HHTCSEEEECSC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC-CCCCCccccC-CCceEEEecCChHH----hcCCCEEEECCC
Confidence 46899999999999999995555 444 44555543 211111 11 12344445556654 35999999883
Q ss_pred hhH---HHHHHHhCCCCE-EEEecc
Q 028418 172 EGF---ISNAGSLKGVQH-VILLSQ 192 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkr-iV~vSS 192 (209)
.+. ++..+.++|+++ +|=.|+
T Consensus 75 ~~~s~~~a~~~~~~G~k~vVID~ss 99 (367)
T 1t4b_A 75 GDYTNEIYPKLRESGWQGYWIDAAS 99 (367)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred chhHHHHHHHHHHCCCCEEEEcCCh
Confidence 222 667778889864 444444
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00035 Score=64.98 Aligned_cols=90 Identities=14% Similarity=0.125 Sum_probs=69.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCC-ceEEEEccCCCHHHHHHh-hcCCcEEEEcC-hh-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTA-LRGVRSIICPS-EG- 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~-~vevv~GDl~D~~sL~~A-L~GvDaVIh~a-~g- 173 (209)
.++.|+|.|+ |.+|+.+++.|.++|++|+++..+++........ ++.++.||.++++.|.+| ++.+++||.+. +.
T Consensus 126 ~~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t~~D~~ 204 (565)
T 4gx0_A 126 TRGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANLSDPD 204 (565)
T ss_dssp CCSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEECSCHHH
T ss_pred cCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEeCCcHH
Confidence 4568999996 7999999999999999999999998876554444 789999999999999987 57899998862 21
Q ss_pred H--HHHHHHhCCCCEEE
Q 028418 174 F--ISNAGSLKGVQHVI 188 (209)
Q Consensus 174 ~--ll~AA~~aGVkriV 188 (209)
+ ++..+++.+..++|
T Consensus 205 n~~~~~~ar~~~~~~ii 221 (565)
T 4gx0_A 205 NANLCLTVRSLCQTPII 221 (565)
T ss_dssp HHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHhcCceEE
Confidence 1 33345555444443
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=9e-05 Score=64.76 Aligned_cols=90 Identities=14% Similarity=0.173 Sum_probs=59.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhh---cCCceEEEEccCCCHHH---HHHhhc-CCcEEEEcC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASNKKF---LKTALR-GVRSIICPS 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~s---L~~AL~-GvDaVIh~a 171 (209)
++||||||+|.||..+++.+...|+ +|.+++|++++.... ++ ++. ..|..+.+. +.+... ++|.||.+.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g--~~~-~~d~~~~~~~~~~~~~~~~~~d~vi~~~ 238 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG--FDA-AINYKKDNVAEQLRESCPAGVDVYFDNV 238 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC--CSE-EEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC--Cce-EEecCchHHHHHHHHhcCCCCCEEEECC
Confidence 8999999999999999999999999 999999987654322 33 222 236655432 333322 699999984
Q ss_pred hhH----HHHHHHhCCCCEEEEecccc
Q 028418 172 EGF----ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 ~g~----ll~AA~~aGVkriV~vSS~~ 194 (209)
-+. .++.++.. .++|.++...
T Consensus 239 G~~~~~~~~~~l~~~--G~iv~~G~~~ 263 (357)
T 2zb4_A 239 GGNISDTVISQMNEN--SHIILCGQIS 263 (357)
T ss_dssp CHHHHHHHHHTEEEE--EEEEECCCGG
T ss_pred CHHHHHHHHHHhccC--cEEEEECCcc
Confidence 222 22333333 4788876543
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.48 E-value=6e-05 Score=63.53 Aligned_cols=71 Identities=7% Similarity=-0.077 Sum_probs=49.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEE--------ccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMA--------GDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~--------GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|+|.|+ |.+|+.++..|.++|++|.++.|++++.......++.+.. .++.+++.+.++++++|.||.+
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 478999996 9999999999999999999999988665432211233221 1222333444556699999988
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=7.5e-05 Score=65.56 Aligned_cols=91 Identities=16% Similarity=0.111 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--hcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKK---FLKTAL--RGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~ 170 (209)
+.++|||+||+|.||..+++.+...|++|.+++|++++... .++ .+. ..|..+.+ .+.++. .++|.||.+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g--~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 238 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLG--AAA-GFNYKKEDFSEATLKFTKGAGVNLILDC 238 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--CSE-EEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC--CcE-EEecCChHHHHHHHHHhcCCCceEEEEC
Confidence 46799999999999999999999999999999998765432 233 222 23555543 333333 379999998
Q ss_pred C-hhH---HHHHHHhCCCCEEEEeccc
Q 028418 171 S-EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 171 a-~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
+ ... .++..+.. .++|.++..
T Consensus 239 ~G~~~~~~~~~~l~~~--G~iv~~G~~ 263 (354)
T 2j8z_A 239 IGGSYWEKNVNCLALD--GRWVLYGLM 263 (354)
T ss_dssp SCGGGHHHHHHHEEEE--EEEEECCCT
T ss_pred CCchHHHHHHHhccCC--CEEEEEecc
Confidence 3 222 33333333 478877653
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00018 Score=64.03 Aligned_cols=86 Identities=17% Similarity=0.114 Sum_probs=53.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe--CCcchhh-h-cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-hhH
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNAME-S-FGTYVESMAGDASNKKFLKTALRGVRSIICPS-EGF 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR--~~~~a~~-~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~g~ 174 (209)
++|.|.||||.||+.+++.|.+++|++..+.. +.+.+.. . +. +.++...+. |++ . + ++|+||.+. .++
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~-g~~i~v~~~-~~~---~-~-~~DvV~~a~g~~~ 73 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFR-GEEIPVEPL-PEG---P-L-PVDLVLASAGGGI 73 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEET-TEEEEEEEC-CSS---C-C-CCSEEEECSHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEc-CceEEEEeC-Chh---h-c-CCCEEEECCCccc
Confidence 47999999999999999999988887665541 1111100 0 11 112222233 333 2 4 999999983 222
Q ss_pred ---HHHHHHhCCCCEEEEeccc
Q 028418 175 ---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS~ 193 (209)
.+....++|+ ++|-+|+.
T Consensus 74 s~~~a~~~~~~G~-~vId~s~~ 94 (331)
T 2yv3_A 74 SRAKALVWAEGGA-LVVDNSSA 94 (331)
T ss_dssp HHHHHHHHHHTTC-EEEECSSS
T ss_pred hHHHHHHHHHCCC-EEEECCCc
Confidence 5566677887 57777775
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.45 E-value=5.7e-05 Score=64.29 Aligned_cols=64 Identities=6% Similarity=0.022 Sum_probs=49.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.|+||.+|+.+++.|...|++|++..|++++.......++. .. +..++++++|.||.+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-----~~---~~~~~~~~aDvVi~a 74 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-----LT---DGDGWIDEADVVVLA 74 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-----CC---CSSGGGGTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-----cC---CHHHHhcCCCEEEEc
Confidence 46899999999999999999999999999999987665433212222 22 234678899999988
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00015 Score=63.19 Aligned_cols=93 Identities=11% Similarity=0.095 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhhcCCcEEEEcC-h
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTALRGVRSIICPS-E 172 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL~GvDaVIh~a-~ 172 (209)
.+.++|||+|| |.||..+++.+...|.+|.+++|++++.......+++.+ .|..+.+ .+.++..++|.||.+. .
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-~d~~~~~~~~~~~~~~~~~d~vid~~g~ 240 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLV-VNPLKEDAAKFMKEKVGGVHAAVVTAVS 240 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEE-ECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEE-ecCCCccHHHHHHHHhCCCCEEEECCCC
Confidence 45789999999 679999999999999999999988766432221223322 3655432 3344446899999883 2
Q ss_pred -hH---HHHHHHhCCCCEEEEeccc
Q 028418 173 -GF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 -g~---ll~AA~~aGVkriV~vSS~ 193 (209)
.. .+++.+..| ++|.+++.
T Consensus 241 ~~~~~~~~~~l~~~G--~~v~~g~~ 263 (339)
T 1rjw_A 241 KPAFQSAYNSIRRGG--ACVLVGLP 263 (339)
T ss_dssp HHHHHHHHHHEEEEE--EEEECCCC
T ss_pred HHHHHHHHHHhhcCC--EEEEeccc
Confidence 22 334444443 78877654
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00014 Score=63.35 Aligned_cols=92 Identities=14% Similarity=0.027 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEcC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPS 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~a 171 (209)
+.++|||+|| |.||..+++.+...|+ +|.+++|++++.......+++.+ .|..+.+ .+.++. +++|.||.+.
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vid~~ 244 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV-INPFEEDVVKEVMDITDGNGVDVFLEFS 244 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEE-ECTTTSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE-ECCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 6789999999 9999999999999999 99999998765432211122222 2444433 333333 2799999883
Q ss_pred -h-hH---HHHHHHhCCCCEEEEeccc
Q 028418 172 -E-GF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 -~-g~---ll~AA~~aGVkriV~vSS~ 193 (209)
. .. .++..+..| ++|.+++.
T Consensus 245 g~~~~~~~~~~~l~~~G--~iv~~g~~ 269 (348)
T 2d8a_A 245 GAPKALEQGLQAVTPAG--RVSLLGLY 269 (348)
T ss_dssp CCHHHHHHHHHHEEEEE--EEEECCCC
T ss_pred CCHHHHHHHHHHHhcCC--EEEEEccC
Confidence 2 22 344444434 78888764
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00032 Score=62.37 Aligned_cols=73 Identities=8% Similarity=0.079 Sum_probs=57.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeC---Ccchhhhc---C--CceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMESF---G--TYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~---~~~a~~~~---~--~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
...+++||+|| |.+|+.++..|.+.|. +|.+..|+ .+++.... . .+.++...++.+.+.+.+++..+|.|
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 35679999997 8999999999999998 89999999 55543221 1 12345556788888899999999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|.+
T Consensus 231 INa 233 (315)
T 3tnl_A 231 TNA 233 (315)
T ss_dssp EEC
T ss_pred EEC
Confidence 987
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0014 Score=57.53 Aligned_cols=69 Identities=12% Similarity=0.153 Sum_probs=55.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|++|||+|+ |.+|+.+++.|.+.|++|.++..++........ -+.+..|+.|.+.+.+.++++|.|+..
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~~~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVA--DEQIVAGFFDSERIEDLVKGSDVTTYD 69 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGS--SEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceEEECCCCCHHHHHHHHhcCCEEEec
Confidence 468999997 799999999999999999999876543222222 246778999999999999999998865
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0005 Score=61.45 Aligned_cols=89 Identities=10% Similarity=0.041 Sum_probs=55.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCC-cc---hhhhcCC---------ceEEEEccCCCHHHHHHhhcCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDK-RN---AMESFGT---------YVESMAGDASNKKFLKTALRGV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~-~~---a~~~~~~---------~vevv~GDl~D~~sL~~AL~Gv 164 (209)
+.+|.|.||||+||+.+++.|.+. ..+++++..+. .. ....++. ..++...|+ |++ .+.++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~----~~~~v 78 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYE----DHKDV 78 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGG----GGTTC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHH----HhcCC
Confidence 468999999999999999988765 35788886221 11 1111110 012222333 333 34799
Q ss_pred cEEEEcC-hhH---HHHHHHhCCCCEEEEeccc
Q 028418 165 RSIICPS-EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 165 DaVIh~a-~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
|+||.+. .+. ++.++.++|++ +|-.|+.
T Consensus 79 DvVf~atp~~~s~~~a~~~~~aG~~-VId~s~~ 110 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELVKNGKI-VVSNASP 110 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHHHTTCE-EEECSST
T ss_pred CEEEECCChHHHHHHHHHHHHCCCE-EEECCcc
Confidence 9999873 222 67778888976 7766664
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00012 Score=64.28 Aligned_cols=94 Identities=14% Similarity=0.103 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHH---HHHhh-cCCcEEEEcC-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF---LKTAL-RGVRSIICPS- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~s---L~~AL-~GvDaVIh~a- 171 (209)
.+.++|||+||+|.||..+++.+...|.+|.+++|++++.......+.+.+ .|..+.+. +.++. .++|.||.+.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-~~~~~~~~~~~~~~~~~~g~Dvvid~~g 244 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRG-INYRSEDFAAVIKAETGQGVDIILDMIG 244 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEE-EeCCchHHHHHHHHHhCCCceEEEECCC
Confidence 356799999999999999999999999999999998876542211112221 24444333 22222 3799999883
Q ss_pred hhH---HHHHHHhCCCCEEEEeccc
Q 028418 172 EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
... .++..+.. .++|.++..
T Consensus 245 ~~~~~~~~~~l~~~--G~iv~~g~~ 267 (353)
T 4dup_A 245 AAYFERNIASLAKD--GCLSIIAFL 267 (353)
T ss_dssp GGGHHHHHHTEEEE--EEEEECCCT
T ss_pred HHHHHHHHHHhccC--CEEEEEEec
Confidence 222 23333332 467776643
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00011 Score=65.50 Aligned_cols=69 Identities=17% Similarity=0.186 Sum_probs=53.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+.++|+|+|| |-+|+.+++.|...|.+|.++.|++++.... ....++.+ ..+.+.+.+.++++|.||.+
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee---eCCHHHHHHHHcCCCEEEEC
Confidence 3479999999 9999999999999999999999988765432 22222222 23566788889999999988
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00019 Score=62.13 Aligned_cols=94 Identities=15% Similarity=0.041 Sum_probs=61.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH---HHHHHhh--cCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~---~sL~~AL--~GvDaVIh~a 171 (209)
.+.++|||+||+|.||..+++.+...|.+|.+++|++++.......+.+. ..|..+. +.+.+.. .|+|.||.+.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 225 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEY-LINASKEDILRQVLKFTNGKGVDASFDSV 225 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE-EEeCCCchHHHHHHHHhCCCCceEEEECC
Confidence 46789999999999999999999999999999999876643221112222 1234433 3344444 3699999883
Q ss_pred hhH----HHHHHHhCCCCEEEEeccc
Q 028418 172 EGF----ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 ~g~----ll~AA~~aGVkriV~vSS~ 193 (209)
-+. .++..+.. .++|.++..
T Consensus 226 g~~~~~~~~~~l~~~--G~iv~~G~~ 249 (334)
T 3qwb_A 226 GKDTFEISLAALKRK--GVFVSFGNA 249 (334)
T ss_dssp GGGGHHHHHHHEEEE--EEEEECCCT
T ss_pred ChHHHHHHHHHhccC--CEEEEEcCC
Confidence 222 34444433 477777643
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00011 Score=63.43 Aligned_cols=94 Identities=7% Similarity=0.017 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~a 171 (209)
.+.++|||+||+|.||..+++.+...|.+|.+++|++++.......+.+. ..|..+.+ .+.+.. +++|.||.+.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 217 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE-TIDYSHEDVAKRVLELTDGKKCPVVYDGV 217 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEeCCCccHHHHHHHHhCCCCceEEEECC
Confidence 45789999999999999999999999999999999876653221111221 12444433 334444 3799999883
Q ss_pred -hhHH---HHHHHhCCCCEEEEeccc
Q 028418 172 -EGFI---SNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 172 -~g~l---l~AA~~aGVkriV~vSS~ 193 (209)
...+ ++..+.. .++|.++..
T Consensus 218 g~~~~~~~~~~l~~~--G~iv~~g~~ 241 (325)
T 3jyn_A 218 GQDTWLTSLDSVAPR--GLVVSFGNA 241 (325)
T ss_dssp CGGGHHHHHTTEEEE--EEEEECCCT
T ss_pred ChHHHHHHHHHhcCC--CEEEEEecC
Confidence 2222 2222222 477777654
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00053 Score=76.33 Aligned_cols=65 Identities=11% Similarity=0.130 Sum_probs=53.9
Q ss_pred CCCCeEEEEcCCCH-HHHHHHHHHHHCCCcEEEEEeCCcc-----hhh---h---cCCceEEEEccCCCHHHHHHhh
Q 028418 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALVKDKRN-----AME---S---FGTYVESMAGDASNKKFLKTAL 161 (209)
Q Consensus 97 ~~~~~ILVTGATGf-IG~~VV~~Ll~~G~~VraLvR~~~~-----a~~---~---~~~~vevv~GDl~D~~sL~~AL 161 (209)
...+++|||||++. ||+.+++.|+++|++|.+..|+.+. +.. . .+..+..+.+|++|++++.+++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Confidence 45789999999999 9999999999999999999998765 221 1 1334778999999999988774
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.30 E-value=3e-05 Score=59.63 Aligned_cols=64 Identities=6% Similarity=0.095 Sum_probs=49.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.++|+|.|+ |.+|+.+++.|...|++|.+..|+++++... ++ +++. .. +.+.++++++|.||.+
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~--~~~~--~~---~~~~~~~~~~Divi~a 87 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE--YEYV--LI---NDIDSLIKNNDVIITA 87 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT--CEEE--EC---SCHHHHHHTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC--CceE--ee---cCHHHHhcCCCEEEEe
Confidence 679999996 9999999999999999999999988765432 22 2222 12 3456788999999987
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0002 Score=62.21 Aligned_cols=95 Identities=15% Similarity=0.103 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh--cCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~a 171 (209)
.+.++|||+||+|.||..+++.+...|.+|.+++|++++.......+.+.+ .|..+.+ .+.+.. .|+|.||.+.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 221 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYV-IDTSTAPLYETVMELTNGIGADAAIDSI 221 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEE-EeCCcccHHHHHHHHhCCCCCcEEEECC
Confidence 456799999999999999999888899999999998876542211122222 2444433 333333 3799999883
Q ss_pred -hhHHHHHH--HhCCCCEEEEeccc
Q 028418 172 -EGFISNAG--SLKGVQHVILLSQR 193 (209)
Q Consensus 172 -~g~ll~AA--~~aGVkriV~vSS~ 193 (209)
...+.+++ .+.+ .++|.++..
T Consensus 222 g~~~~~~~~~~l~~~-G~iv~~G~~ 245 (340)
T 3gms_A 222 GGPDGNELAFSLRPN-GHFLTIGLL 245 (340)
T ss_dssp CHHHHHHHHHTEEEE-EEEEECCCT
T ss_pred CChhHHHHHHHhcCC-CEEEEEeec
Confidence 22222222 2222 578877654
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00025 Score=61.85 Aligned_cols=92 Identities=13% Similarity=0.153 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhh--hcCCceEEEEccCCCHHH---HHHhh--cCCcEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME--SFGTYVESMAGDASNKKF---LKTAL--RGVRSII 168 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~s---L~~AL--~GvDaVI 168 (209)
.+.++||||||+|.||..+++.+... |.+|.+++|++++... .++ .+. ..|..+.+. +.+.. .++|.||
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g--~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi 245 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAG--ADY-VINASMQDPLAEIRRITESKGVDAVI 245 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHT--CSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC--CCE-EecCCCccHHHHHHHHhcCCCceEEE
Confidence 35679999999999999999999988 9999999988765432 233 222 125555433 55555 3799999
Q ss_pred EcC-hh-H---HHHHHHhCCCCEEEEeccc
Q 028418 169 CPS-EG-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 169 h~a-~g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
.+. .. . .++..+.. .++|.++..
T Consensus 246 ~~~g~~~~~~~~~~~l~~~--G~iv~~g~~ 273 (347)
T 1jvb_A 246 DLNNSEKTLSVYPKALAKQ--GKYVMVGLF 273 (347)
T ss_dssp ESCCCHHHHTTGGGGEEEE--EEEEECCSS
T ss_pred ECCCCHHHHHHHHHHHhcC--CEEEEECCC
Confidence 983 22 2 22223333 378877654
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00022 Score=55.97 Aligned_cols=84 Identities=18% Similarity=-0.052 Sum_probs=56.0
Q ss_pred CCeEEEEcCC---CHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Chh
Q 028418 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG 173 (209)
Q Consensus 99 ~~~ILVTGAT---GfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g 173 (209)
.++|+|.|++ |.+|..+++.|++.|++ +..+++.+. .... ++.++ .++.++-..+|.++.+ ...
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~~i~--G~~~~-------~sl~el~~~vDlavi~vp~~ 81 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEELF--GEEAV-------ASLLDLKEPVDILDVFRPPS 81 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEET--TEECB-------SSGGGCCSCCSEEEECSCHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccCcCC--CEEec-------CCHHHCCCCCCEEEEEeCHH
Confidence 4589999999 89999999999999997 445577642 2221 22221 1233344579998877 221
Q ss_pred ---HHHHHHHhCCCCEEEEeccc
Q 028418 174 ---FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 ---~ll~AA~~aGVkriV~vSS~ 193 (209)
.+++.|.+.|++.++..++.
T Consensus 82 ~~~~v~~~~~~~gi~~i~~~~g~ 104 (140)
T 1iuk_A 82 ALMDHLPEVLALRPGLVWLQSGI 104 (140)
T ss_dssp HHTTTHHHHHHHCCSCEEECTTC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCc
Confidence 15677788899988765543
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0017 Score=58.53 Aligned_cols=87 Identities=15% Similarity=0.146 Sum_probs=54.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCc---EEEEEeCCcchhh-hcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~---VraLvR~~~~a~~-~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~ 174 (209)
.+|.|.||||++|+.+++.|.++.++ ++.+.-..+.-+. .+. +.+...-++.+ +.+.++|.||.+ ..+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~-~~~~~~~~~~~-----~~~~~~Dvvf~a~~~~~ 75 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFR-GQEIEVEDAET-----ADPSGLDIALFSAGSAM 75 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEET-TEEEEEEETTT-----SCCTTCSEEEECSCHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeec-CCceEEEeCCH-----HHhccCCEEEECCChHH
Confidence 57999999999999999988887554 5555522211110 121 12333333332 346899999987 3322
Q ss_pred ---HHHHHHhCCCCEEEEeccc
Q 028418 175 ---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS~ 193 (209)
++..+.++|+ ++|=+|+.
T Consensus 76 s~~~a~~~~~~G~-~vID~Sa~ 96 (344)
T 3tz6_A 76 SKVQAPRFAAAGV-TVIDNSSA 96 (344)
T ss_dssp HHHHHHHHHHTTC-EEEECSST
T ss_pred HHHHHHHHHhCCC-EEEECCCc
Confidence 5666678887 57777764
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00065 Score=61.65 Aligned_cols=72 Identities=10% Similarity=0.071 Sum_probs=57.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
-.|+++|+|.|+ |.+|+.+++.+.+.|++|.++..++........ -+.+.+|+.|++.+.+..+++|+|+.-
T Consensus 32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~a~~~D~V~~~ 103 (419)
T 4e4t_A 32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVA--DRHLRAAYDDEAALAELAGLCEAVSTE 103 (419)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHS--SEEECCCTTCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhC--CEEEECCcCCHHHHHHHHhcCCEEEEc
Confidence 446779999985 899999999999999999999766543322222 256789999999999999999998853
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00034 Score=61.04 Aligned_cols=92 Identities=18% Similarity=0.199 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--hcCCceEEEEccCCC-HHHHHHhhc--CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN-KKFLKTALR--GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D-~~sL~~AL~--GvDaVIh~a 171 (209)
.+.++|||+||+|.||..+++.+...|.+|.++++++++... .++. ..++.-+ .+ .+.+.++.. |+|.||.+.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga-~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA-DIVLPLE-EGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC-SEEEESS-TTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-cEEecCc-hhHHHHHHHHhCCCCceEEEECC
Confidence 357799999999999999999999999999999998876532 2332 1233333 22 223444443 699999883
Q ss_pred hh-H---HHHHHHhCCCCEEEEecc
Q 028418 172 EG-F---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g-~---ll~AA~~aGVkriV~vSS 192 (209)
-+ . .+++.+.. .++|.++.
T Consensus 236 g~~~~~~~~~~l~~~--G~iv~~G~ 258 (342)
T 4eye_A 236 GGPAFDDAVRTLASE--GRLLVVGF 258 (342)
T ss_dssp C--CHHHHHHTEEEE--EEEEEC--
T ss_pred chhHHHHHHHhhcCC--CEEEEEEc
Confidence 21 1 23333332 46776654
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0012 Score=61.03 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=58.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHH-HCCCcEEEEEeCCcchh------------------hhcCCceEEEEccCCCHHHHHH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll-~~G~~VraLvR~~~~a~------------------~~~~~~vevv~GDl~D~~sL~~ 159 (209)
.+++|||||+..+|......|. ..|..|.++.|+.+... ...+..+..+.+|+.|++.+++
T Consensus 50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~ 129 (401)
T 4ggo_A 50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQ 129 (401)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHH
Confidence 4699999999999999988887 67999999987654321 1234567899999999998888
Q ss_pred hhc-------CCcEEEEc
Q 028418 160 ALR-------GVRSIICP 170 (209)
Q Consensus 160 AL~-------GvDaVIh~ 170 (209)
+++ ++|.|||.
T Consensus 130 vi~~i~~~~G~IDiLVhS 147 (401)
T 4ggo_A 130 VIEEAKKKGIKFDLIVYS 147 (401)
T ss_dssp HHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHhcCCCCEEEEe
Confidence 764 68999998
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0018 Score=54.99 Aligned_cols=95 Identities=8% Similarity=-0.007 Sum_probs=66.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCC-------------------cchhh------hcCCc--eEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAME------SFGTY--VESM 147 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~-------------------~~a~~------~~~~~--vevv 147 (209)
.....+|+|.|+ |.+|+.+++.|...|. ++.+++++. .++.. ...+. ++.+
T Consensus 28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 345679999996 7899999999999997 788888876 33321 11233 4555
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcC--hh---HHHHHHHhCCCCEEEEeccc
Q 028418 148 AGDASNKKFLKTALRGVRSIICPS--EG---FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a--~g---~ll~AA~~aGVkriV~vSS~ 193 (209)
..+++ .+.+.+.++++|.||.+. .. .+.++|++.++. +|+.+..
T Consensus 107 ~~~~~-~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p-~i~~~~~ 155 (249)
T 1jw9_B 107 NALLD-DAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP-LVSGAAI 155 (249)
T ss_dssp CSCCC-HHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC-EEEEEEE
T ss_pred eccCC-HhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCC-EEEeeec
Confidence 66665 456778899999999883 11 266778888865 5555444
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00069 Score=59.03 Aligned_cols=89 Identities=17% Similarity=0.196 Sum_probs=59.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--cCCceEEEEccCCCHH---HHHHhh--cCCcEEEEcCh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKK---FLKTAL--RGVRSIICPSE 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--~~~~vevv~GDl~D~~---sL~~AL--~GvDaVIh~a~ 172 (209)
++|||+||+|.||...++.+...|.+|.++++++++.... ++.. +++ |..+.+ .+.++. +|+|.||.+.-
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~~~--~~~~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAA-HVL--NEKAPDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCS-EEE--ETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC-EEE--ECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence 6999999999999999999999999999999888765422 3321 222 444433 333333 38999998832
Q ss_pred h-H---HHHHHHhCCCCEEEEeccc
Q 028418 173 G-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 173 g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
+ . .+++.+.. .++|.++..
T Consensus 243 ~~~~~~~~~~l~~~--G~iv~~G~~ 265 (349)
T 3pi7_A 243 GPLASAIFNAMPKR--ARWIIYGRL 265 (349)
T ss_dssp HHHHHHHHHHSCTT--CEEEECCCS
T ss_pred ChhHHHHHhhhcCC--CEEEEEecc
Confidence 2 2 33333333 588888654
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00059 Score=53.57 Aligned_cols=82 Identities=7% Similarity=-0.018 Sum_probs=55.0
Q ss_pred CCeEEEEcCC---CHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Chh-
Q 028418 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG- 173 (209)
Q Consensus 99 ~~~ILVTGAT---GfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g- 173 (209)
..+|+|.||+ |.+|..+++.|++.|++| ...++... ... ++.+ .. ++.++...+|.++.+ ...
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v--~~Vnp~~~-~i~--G~~~-y~------sl~~l~~~vDlvvi~vp~~~ 89 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDV--YPVNPKYE-EVL--GRKC-YP------SVLDIPDKIEVVDLFVKPKL 89 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEE--EEECTTCS-EET--TEEC-BS------SGGGCSSCCSEEEECSCHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEE--EEECCCCC-eEC--Ceec-cC------CHHHcCCCCCEEEEEeCHHH
Confidence 4589999999 899999999999999974 44466532 222 2222 11 223334579998887 221
Q ss_pred --HHHHHHHhCCCCEEEEecc
Q 028418 174 --FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS 192 (209)
.+++.|.+.|++.+++.++
T Consensus 90 ~~~vv~~~~~~gi~~i~~~~g 110 (144)
T 2d59_A 90 TMEYVEQAIKKGAKVVWFQYN 110 (144)
T ss_dssp HHHHHHHHHHHTCSEEEECTT
T ss_pred HHHHHHHHHHcCCCEEEECCC
Confidence 2677788899998876554
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00071 Score=58.38 Aligned_cols=69 Identities=10% Similarity=0.045 Sum_probs=52.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++|+|.|+ |.||+.+++.|...|.+|.+..|++++.......+++.+ +...+.++++++|.||.+
T Consensus 154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPF-----HTDELKEHVKDIDICINT 222 (300)
T ss_dssp CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEE-----EGGGHHHHSTTCSEEEEC
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEE-----chhhHHHHhhCCCEEEEC
Confidence 456789999996 999999999999999999999998765432211234433 234678889999999976
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.001 Score=58.00 Aligned_cols=85 Identities=11% Similarity=0.044 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC--h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS--E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a--~ 172 (209)
+..+|+|.|+||.+|+.+++.|++.|+++++.+ +|.+. ...+ ++.+ +. ++.++++ .+|+++.+. .
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V-~p~~~g~~~~--G~~v----y~---sl~el~~~~~~D~viI~tP~~ 75 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGV-TPGKGGTTHL--GLPV----FN---TVREAVAATGATASVIYVPAP 75 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTTCEET--TEEE----ES---SHHHHHHHHCCCEEEECCCGG
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe-CCCcccceeC--Ceec----cC---CHHHHhhcCCCCEEEEecCHH
Confidence 456899999999999999999998899866555 44432 1112 2322 22 3455555 899998772 2
Q ss_pred h--HHHHHHHhCCCCEEEEecc
Q 028418 173 G--FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g--~ll~AA~~aGVkriV~vSS 192 (209)
. .+++.|.++|++-+|.++.
T Consensus 76 ~~~~~~~ea~~~Gi~~iVi~t~ 97 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLIITITE 97 (288)
T ss_dssp GHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHCCCCEEEEECC
Confidence 2 2677778889887676654
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0013 Score=59.16 Aligned_cols=69 Identities=12% Similarity=0.191 Sum_probs=55.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
+++|+|.|+ |.+|+.+++.+.+.|++|+++. ++.............+.+|+.|.+.+.+..+.+|+|+.
T Consensus 24 ~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 24 SRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 468999996 7999999999999999999999 65432222222224678999999999999999998764
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00081 Score=58.44 Aligned_cols=90 Identities=14% Similarity=0.078 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhh-cCCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL-RGVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL-~GvDaVIh~a- 171 (209)
+.++|||+|| |.+|..+++.+...|. +|.+++|++++....... .+. ..|..+.+ .+.++. .|+|.||.+.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~-v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR-LVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE-EECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh-ccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 6789999999 9999999999989999 999999887654322221 222 23444432 222222 3799999883
Q ss_pred h-hH---HHHHHHhCCCCEEEEecc
Q 028418 172 E-GF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~-g~---ll~AA~~aGVkriV~vSS 192 (209)
. .. .+++.+..| ++|.++.
T Consensus 241 ~~~~~~~~~~~l~~~G--~iv~~g~ 263 (343)
T 2dq4_A 241 NEAAIHQGLMALIPGG--EARILGI 263 (343)
T ss_dssp CHHHHHHHHHHEEEEE--EEEECCC
T ss_pred CHHHHHHHHHHHhcCC--EEEEEec
Confidence 2 22 344444444 7887765
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0046 Score=54.03 Aligned_cols=70 Identities=11% Similarity=0.092 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
++++|||+|+ |.+|+.+++.+.+.|++|.++..++........ -+++..|+.|++.+.++++ ++|+|+..
T Consensus 10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~--d~~~~~~~~d~~~l~~~~~~~~~d~v~~~ 81 (391)
T 1kjq_A 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHVA--HRSHVINMLDGDALRRVVELEKPHYIVPE 81 (391)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS--SEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchhhhc--cceEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 4679999987 799999999999999999999876643222221 2567789999999988885 89999875
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00047 Score=58.61 Aligned_cols=63 Identities=8% Similarity=-0.036 Sum_probs=47.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|+.+++.|.+.|++|.+..|++++.......++.. ..++.++++++|.||.+
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~~~~~~~~aDvvi~~ 64 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAER-------AATPCEVVESCPVTFAM 64 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEE
Confidence 6899998 599999999999999999999999988765433223322 12455667778888776
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0019 Score=57.37 Aligned_cols=70 Identities=13% Similarity=0.115 Sum_probs=56.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
.++++|+|.|+ |.+|+.+++.+.+.|++|++++.++........ -+.+.+|++|.+.+.+..+.+|+|..
T Consensus 10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVA--HEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGS--SEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhC--CEEEECCCCCHHHHHHHHHhCCccee
Confidence 46789999984 789999999999999999999876643222222 25788999999999999999998865
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0022 Score=58.44 Aligned_cols=87 Identities=14% Similarity=0.125 Sum_probs=52.7
Q ss_pred CeEEEEcCCCHHHHHHHH-HHHHCC---CcEEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Ch
Q 028418 100 DAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICP-SE 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~-~Ll~~G---~~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~ 172 (209)
++|.|.||||++|+.+++ .|.++. .+++.+.-+ +.... .+.. .+...-+..+++ .++++|.||.+ ..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~-~~~~~~~~~~~~----~~~~~Dvvf~a~~~ 74 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS-QIGVPAPNFGK-DAGMLHDAFDIE----SLKQLDAVITCQGG 74 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS-STTSBCCCSSS-CCCBCEETTCHH----HHTTCSEEEECSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc-ccCcCHHHhCC-CceEEEecCChh----HhccCCEEEECCCh
Confidence 479999999999999999 555544 356666522 11111 1221 122222344443 35899999988 33
Q ss_pred hH---HHHHHHhCCCC-EEEEecc
Q 028418 173 GF---ISNAGSLKGVQ-HVILLSQ 192 (209)
Q Consensus 173 g~---ll~AA~~aGVk-riV~vSS 192 (209)
+. ++..+.++|.+ ++|=.|+
T Consensus 75 ~~s~~~~~~~~~~G~k~~VID~ss 98 (370)
T 3pzr_A 75 SYTEKVYPALRQAGWKGYWIDAAS 98 (370)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCc
Confidence 32 56666788985 6665665
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0012 Score=56.81 Aligned_cols=36 Identities=14% Similarity=0.219 Sum_probs=32.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
+++|.|.||.|.+|+.++..|.+.|++|.+..|+++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 358999999999999999999999999999988764
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0018 Score=56.45 Aligned_cols=90 Identities=13% Similarity=0.077 Sum_probs=59.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--hcCCceEEEEccCCC----HHHHHHhh-----cCCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN----KKFLKTAL-----RGVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D----~~sL~~AL-----~GvD 165 (209)
.+.++|||+|| |-+|...++.+...|.+|.++++++++... .++.. .++ |..+ .+.+.+.. .++|
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~~--~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD-VTL--VVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS-EEE--ECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC-EEE--cCcccccHHHHHHHHhccccCCCCC
Confidence 46789999997 999999999888899999999888766432 23322 222 3332 44555555 4799
Q ss_pred EEEEcC-hh-H---HHHHHHhCCCCEEEEecc
Q 028418 166 SIICPS-EG-F---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 166 aVIh~a-~g-~---ll~AA~~aGVkriV~vSS 192 (209)
.||.+. .. + .+++.+.. .++|.++.
T Consensus 243 ~vid~~g~~~~~~~~~~~l~~~--G~iv~~G~ 272 (352)
T 1e3j_A 243 VTIDCSGNEKCITIGINITRTG--GTLMLVGM 272 (352)
T ss_dssp EEEECSCCHHHHHHHHHHSCTT--CEEEECSC
T ss_pred EEEECCCCHHHHHHHHHHHhcC--CEEEEEec
Confidence 999883 22 2 23333333 47888764
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00059 Score=59.06 Aligned_cols=67 Identities=7% Similarity=-0.009 Sum_probs=49.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...+++|.|.| .|.+|..+++.|.+.|++|++..|++++.......++.+ ..++.++++++|.||.+
T Consensus 18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~-------~~~~~~~~~~aDvvi~~ 84 (310)
T 3doj_A 18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV-------CESPAEVIKKCKYTIAM 84 (310)
T ss_dssp CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE-------CSSHHHHHHHCSEEEEC
T ss_pred cccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE-------cCCHHHHHHhCCEEEEE
Confidence 34467899997 699999999999999999999999988765433223322 12345566777887766
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00076 Score=59.05 Aligned_cols=90 Identities=11% Similarity=-0.006 Sum_probs=59.5
Q ss_pred CeEEEEcCCCHHHHHH-HHHH-HHCCCc-EEEEEeCCc---chhhhcCCceEEEEccCCCHH--HHHHhhcCCcEEEEcC
Q 028418 100 DAVLVTDGDSDIGQMV-ILSL-IVKRTR-IKALVKDKR---NAMESFGTYVESMAGDASNKK--FLKTALRGVRSIICPS 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~V-V~~L-l~~G~~-VraLvR~~~---~a~~~~~~~vevv~GDl~D~~--sL~~AL~GvDaVIh~a 171 (209)
++|||+|| |.||... ++.+ ...|.+ |.+++++++ +......-+++.+ |..+.+ .+.++-.|+|.||.+.
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~gg~Dvvid~~ 250 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVYEQMDFIYEAT 250 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHSCCEEEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhCCCCCEEEECC
Confidence 89999999 9999999 8877 778988 999999887 5443322345555 665432 2444312699999883
Q ss_pred --hhH---HHHHHHhCCCCEEEEecccc
Q 028418 172 --EGF---ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 --~g~---ll~AA~~aGVkriV~vSS~~ 194 (209)
..+ .++..+.. .++|.++...
T Consensus 251 g~~~~~~~~~~~l~~~--G~iv~~g~~~ 276 (357)
T 2b5w_A 251 GFPKHAIQSVQALAPN--GVGALLGVPS 276 (357)
T ss_dssp CCHHHHHHHHHHEEEE--EEEEECCCCC
T ss_pred CChHHHHHHHHHHhcC--CEEEEEeCCC
Confidence 222 33343433 3788876543
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00082 Score=59.55 Aligned_cols=93 Identities=11% Similarity=0.042 Sum_probs=62.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--hhH
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--EGF 174 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a--~g~ 174 (209)
.+.++|||+|| |-||...++.+...|.+|.++++++++.......+++. ..|..+.+.+.+...++|.||.+. ...
T Consensus 193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~~g~Dvvid~~g~~~~ 270 (369)
T 1uuf_A 193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE-VVNSRNADEMAAHLKSFDFILNTVAAPHN 270 (369)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE-EEETTCHHHHHTTTTCEEEEEECCSSCCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE-EeccccHHHHHHhhcCCCEEEECCCCHHH
Confidence 46789999998 88999999988889999999998887654221112322 235667766666667999999872 112
Q ss_pred ---HHHHHHhCCCCEEEEeccc
Q 028418 175 ---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS~ 193 (209)
.++..+.. .++|.++..
T Consensus 271 ~~~~~~~l~~~--G~iv~~G~~ 290 (369)
T 1uuf_A 271 LDDFTTLLKRD--GTMTLVGAP 290 (369)
T ss_dssp HHHHHTTEEEE--EEEEECCCC
T ss_pred HHHHHHHhccC--CEEEEeccC
Confidence 23333333 367776543
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00024 Score=60.91 Aligned_cols=70 Identities=9% Similarity=0.042 Sum_probs=49.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe--CCcchhhhcCCce------EEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNAMESFGTYV------ESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR--~~~~a~~~~~~~v------evv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.|.|+ |.+|+.++..|.++|++|.+..| ++++.......+. ++....+.+++++.++++++|.||.+
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEc
Confidence 47999986 99999999999999999999999 7765543322111 10000123333567788999999988
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0026 Score=58.08 Aligned_cols=88 Identities=14% Similarity=0.036 Sum_probs=54.0
Q ss_pred CCeEEEEcCCCHHHHHHHH-HHHHCC---CcEEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-
Q 028418 99 RDAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPS- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~-~Ll~~G---~~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a- 171 (209)
.++|.|.||||++|+.+++ .|.++. .+++.+.-+ +.... .+... +...-+..+++. +.++|.||.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~~-~~~v~~~~~~~~----~~~vDvvf~a~~ 77 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAKN-ETTLKDATSIDD----LKKCDVIITCQG 77 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCCS-CCBCEETTCHHH----HHTCSEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCCC-ceEEEeCCChhH----hcCCCEEEECCC
Confidence 4689999999999999999 555544 356666532 21111 12211 222224445443 57999999883
Q ss_pred hhH---HHHHHHhCCCC-EEEEecc
Q 028418 172 EGF---ISNAGSLKGVQ-HVILLSQ 192 (209)
Q Consensus 172 ~g~---ll~AA~~aGVk-riV~vSS 192 (209)
.+. ++..+.++|++ ++|=.|+
T Consensus 78 ~~~s~~~~~~~~~~G~k~~VID~ss 102 (377)
T 3uw3_A 78 GDYTNDVFPKLRAAGWNGYWIDAAS 102 (377)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred hHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 332 56667788985 6666665
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.001 Score=58.28 Aligned_cols=92 Identities=9% Similarity=0.017 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhhcCCcEEEEcC--hhH
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS--EGF 174 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a--~g~ 174 (209)
+.++|||+|+ |-||...++.+...|.+|.++++++++..... .-+++.+ .|..+.+.+.++..++|.||.+. ..+
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~g~D~vid~~g~~~~ 257 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY-VIGSDQAKMSELADSLDYVIDTVPVHHA 257 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE-EETTCHHHHHHSTTTEEEEEECCCSCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee-eccccHHHHHHhcCCCCEEEECCCChHH
Confidence 7789999996 99999999988889999999999887643221 2223222 35567777877778999999872 112
Q ss_pred ---HHHHHHhCCCCEEEEeccc
Q 028418 175 ---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 ---ll~AA~~aGVkriV~vSS~ 193 (209)
.++..+.. .++|.++..
T Consensus 258 ~~~~~~~l~~~--G~iv~~G~~ 277 (357)
T 2cf5_A 258 LEPYLSLLKLD--GKLILMGVI 277 (357)
T ss_dssp SHHHHTTEEEE--EEEEECSCC
T ss_pred HHHHHHHhccC--CEEEEeCCC
Confidence 33333333 467777653
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00084 Score=58.44 Aligned_cols=65 Identities=8% Similarity=-0.002 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+++|.|.|+ |.+|+.+++.|.+.|++|++..|++++.......++.+. .++.++++++|.||.+
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e~~~~aDvVi~~ 94 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH-------EQARAAARDADIVVSM 94 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE-------SSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee-------CCHHHHHhcCCEEEEE
Confidence 3568999965 999999999999999999999999887655433344331 2456778888988877
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00034 Score=61.04 Aligned_cols=69 Identities=16% Similarity=0.038 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++++|+|+ |.+|+.++..|.+.|+ +|++..|+++++..+ ++.... ++.+.+.+.+++.++|.||.+
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~ 211 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINT 211 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEEC
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEEC
Confidence 34679999998 8899999999999998 899999998776432 221110 122345678889999999988
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0014 Score=57.80 Aligned_cols=94 Identities=11% Similarity=0.025 Sum_probs=56.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh--hcCCcEEEEcC-hh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA--LRGVRSIICPS-EG 173 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A--L~GvDaVIh~a-~g 173 (209)
.+.++|||+||+|-||..+++.+...|.+|.+.++ +++......-+++.+ .|..+.+..++. ..|+|.||.+. ..
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~g~D~vid~~g~~ 259 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLGADDV-IDYKSGSVEEQLKSLKPFDFILDNVGGS 259 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTTCSEE-EETTSSCHHHHHHTSCCBSEEEESSCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcCCCEE-EECCchHHHHHHhhcCCCCEEEECCCCh
Confidence 35679999999999999999999999999998884 343322111123322 245444333322 25899999883 22
Q ss_pred -HHHHHHHh--CCCCEEEEecc
Q 028418 174 -FISNAGSL--KGVQHVILLSQ 192 (209)
Q Consensus 174 -~ll~AA~~--aGVkriV~vSS 192 (209)
..++.+.+ ..-.++|.++.
T Consensus 260 ~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 260 TETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp HHHHGGGGBCSSSCCEEEESCC
T ss_pred hhhhHHHHHhhcCCcEEEEeCC
Confidence 11222211 12257887764
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0015 Score=51.04 Aligned_cols=83 Identities=8% Similarity=0.154 Sum_probs=55.6
Q ss_pred CCeEEEEcCC---CHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Chh-
Q 028418 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG- 173 (209)
Q Consensus 99 ~~~ILVTGAT---GfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g- 173 (209)
..+|.|.|+| |.+|..+++.|++.|++|... ++... ... ++.++ +++.++.+.+|.|+.+ ...
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~v--np~~~-~i~--G~~~~-------~s~~el~~~vDlvii~vp~~~ 81 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPV--NPNYD-EIE--GLKCY-------RSVRELPKDVDVIVFVVPPKV 81 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--CTTCS-EET--TEECB-------SSGGGSCTTCCEEEECSCHHH
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEe--CCCCC-eEC--Ceeec-------CCHHHhCCCCCEEEEEeCHHH
Confidence 4579999998 899999999999999985554 44432 111 22221 2234445579999887 211
Q ss_pred --HHHHHHHhCCCCEEEEeccc
Q 028418 174 --FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS~ 193 (209)
.+++.|.+.|++.++..++.
T Consensus 82 v~~v~~~~~~~g~~~i~~~~~~ 103 (138)
T 1y81_A 82 GLQVAKEAVEAGFKKLWFQPGA 103 (138)
T ss_dssp HHHHHHHHHHTTCCEEEECTTS
T ss_pred HHHHHHHHHHcCCCEEEEcCcc
Confidence 25666777899988877653
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0005 Score=60.32 Aligned_cols=90 Identities=11% Similarity=0.087 Sum_probs=59.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--hcCCceEEEEccCCCH-HHHHHhhcCCcEEEEcC-h
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNK-KFLKTALRGVRSIICPS-E 172 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D~-~sL~~AL~GvDaVIh~a-~ 172 (209)
.+.++|||+|| |.||..+++.+...|.+|.++++++++... .++ ++.+ .|..+. +...+...++|.||.+. .
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lG--a~~v-~~~~~~~~~~~~~~~~~D~vid~~g~ 253 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMG--ADHY-IATLEEGDWGEKYFDTFDLIVVCASS 253 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHT--CSEE-EEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcC--CCEE-EcCcCchHHHHHhhcCCCEEEECCCC
Confidence 35789999999 999999999888899999999998876532 233 2222 244443 33343346899999883 2
Q ss_pred ---hH---HHHHHHhCCCCEEEEecc
Q 028418 173 ---GF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 ---g~---ll~AA~~aGVkriV~vSS 192 (209)
.. .+++.+.. .++|.++.
T Consensus 254 ~~~~~~~~~~~~l~~~--G~iv~~g~ 277 (360)
T 1piw_A 254 LTDIDFNIMPKAMKVG--GRIVSISI 277 (360)
T ss_dssp STTCCTTTGGGGEEEE--EEEEECCC
T ss_pred CcHHHHHHHHHHhcCC--CEEEEecC
Confidence 22 23333333 37777654
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0003 Score=59.85 Aligned_cols=64 Identities=6% Similarity=-0.074 Sum_probs=47.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| .|.+|+.+++.|.+.||+|++..|++++.......++.+ . .++.++++++|.||.+
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~---~~~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQ----A---SSPAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEE----C---SCHHHHHHHCSEEEEC
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----c---CCHHHHHHcCCEEEEE
Confidence 46899997 799999999999999999999999988765432222222 1 2345566677877776
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0013 Score=57.37 Aligned_cols=85 Identities=21% Similarity=0.196 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC--h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS--E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a--~ 172 (209)
+..+|+|.|+||..|+.+++.|++.|+++.+.+ +|... .... ++.++ +++.++.+ .+|.++.+. .
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~V-nP~~~g~~i~--G~~vy-------~sl~el~~~~~~Dv~Ii~vp~~ 75 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGV-TPGKGGMEVL--GVPVY-------DTVKEAVAHHEVDASIIFVPAP 75 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTTCEET--TEEEE-------SSHHHHHHHSCCSEEEECCCHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEE-CCCCCCceEC--CEEee-------CCHHHHhhcCCCCEEEEecCHH
Confidence 456899999999999999999999999966555 34321 1111 23321 12445555 789888762 2
Q ss_pred h--HHHHHHHhCCCCEEEEecc
Q 028418 173 G--FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g--~ll~AA~~aGVkriV~vSS 192 (209)
. .+++.|.++|++.+|.+++
T Consensus 76 ~~~~~~~ea~~~Gi~~vVi~t~ 97 (288)
T 1oi7_A 76 AAADAALEAAHAGIPLIVLITE 97 (288)
T ss_dssp HHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHHCCCCEEEEECC
Confidence 1 2677777888887776664
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00039 Score=54.72 Aligned_cols=82 Identities=10% Similarity=0.013 Sum_probs=53.0
Q ss_pred CCeEEEEcCC---CHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc--Ch
Q 028418 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP--SE 172 (209)
Q Consensus 99 ~~~ILVTGAT---GfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~--a~ 172 (209)
..+|.|.|++ |.+|..+++.|++.|++|.. .++.+. .... ++.+ ..++ .++...+|.|+.+ ..
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~--vnp~~~g~~i~--G~~~-~~sl------~el~~~~Dlvii~vp~~ 81 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIP--VSPKVAGKTLL--GQQG-YATL------ADVPEKVDMVDVFRNSE 81 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEE--ECSSSTTSEET--TEEC-CSST------TTCSSCCSEEECCSCST
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEE--eCCcccccccC--Ceec-cCCH------HHcCCCCCEEEEEeCHH
Confidence 3479999998 89999999999999998554 455442 1111 2222 1222 2334578998877 22
Q ss_pred h--HHHHHHHhCCCCEEEEec
Q 028418 173 G--FISNAGSLKGVQHVILLS 191 (209)
Q Consensus 173 g--~ll~AA~~aGVkriV~vS 191 (209)
. .+++.|.+.|++.++..+
T Consensus 82 ~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 82 AAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp HHHHHHHHHHHHTCCEEECCT
T ss_pred HHHHHHHHHHHcCCCEEEEcC
Confidence 1 255666678998877654
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0012 Score=56.81 Aligned_cols=69 Identities=14% Similarity=0.058 Sum_probs=52.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++|+|.| .|.||+.+++.|...|.+|.+..|++++.......+++++ +.+.+.++++++|.|+.+
T Consensus 152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPF-----HISKAAQELRDVDVCINT 220 (293)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEE-----EGGGHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeec-----ChhhHHHHhcCCCEEEEC
Confidence 35678999999 5999999999999999999999998765432211234433 234678889999999976
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00032 Score=63.03 Aligned_cols=70 Identities=13% Similarity=0.029 Sum_probs=55.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.++|+|+|+ |.||+.+++.|...|.+|.+..|++++.. ..++..+. .+..+...+.++++++|.||.+
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~---~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH---TRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE---EEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE---eccCCHHHHHHHHcCCCEEEEC
Confidence 46789999998 99999999999999999999999886643 22333222 2344567788999999999986
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0056 Score=54.71 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=55.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
+++|||+|+ |.+|+.+++.|.+.|++|.++..++........ -+.+..|+.|.+.+.++++ ++|+|+..
T Consensus 19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~~d~V~~~ 89 (433)
T 2dwc_A 19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPAMQVA--HRSYVGNMMDKDFLWSVVEREKPDAIIPE 89 (433)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHHHHHS--SEEEESCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhc--ceEEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 568999987 799999999999999999999876644222221 2567789999999988885 89999875
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00065 Score=59.18 Aligned_cols=67 Identities=13% Similarity=0.193 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.++|||+|| |.||...++.+...|.+|.++++++++......-+++.+. .+++.+.+ ++|.||.+
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~~---~~D~vid~ 241 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCKE---ELDFIIST 241 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCCS---CEEEEEEC
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHhc---CCCEEEEC
Confidence 46789999997 9999999998889999999999988775433222343333 45554433 99999987
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0043 Score=54.27 Aligned_cols=86 Identities=10% Similarity=0.084 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC--
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS-- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a-- 171 (209)
.++.+++|.|+||..|+.+++.|++.|+++.+.+ +|.+. ...+ ++.++ . ++.++.+ .+|.++.+.
T Consensus 11 ~~~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~V-nP~~~g~~i~--G~~vy----~---sl~el~~~~~~Dv~ii~vp~ 80 (294)
T 2yv1_A 11 DENTKAIVQGITGRQGSFHTKKMLECGTKIVGGV-TPGKGGQNVH--GVPVF----D---TVKEAVKETDANASVIFVPA 80 (294)
T ss_dssp CTTCCEEEETTTSHHHHHHHHHHHHTTCCEEEEE-CTTCTTCEET--TEEEE----S---SHHHHHHHHCCCEEEECCCH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHhCCCeEEEEe-CCCCCCceEC--CEeee----C---CHHHHhhcCCCCEEEEccCH
Confidence 3566789999999999999999999999955555 45432 1112 23332 2 3445555 789888762
Q ss_pred hh--HHHHHHHhCCCCEEEEecc
Q 028418 172 EG--FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g--~ll~AA~~aGVkriV~vSS 192 (209)
.. .+++.|.++|++.+|.+++
T Consensus 81 ~~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 81 PFAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHHHCCCCEEEEECC
Confidence 21 2667777888887776654
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0015 Score=58.62 Aligned_cols=74 Identities=12% Similarity=-0.063 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCC----------------------CH
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----------------------NK 154 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~----------------------D~ 154 (209)
.+.++|+|+|+ |-+|..+++.|...|.+|.+..|++.+......-+.+++..|.. ++
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 36789999996 99999999999999999999998876543221122333311221 23
Q ss_pred HHHHHhhcCCcEEEEcC
Q 028418 155 KFLKTALRGVRSIICPS 171 (209)
Q Consensus 155 ~sL~~AL~GvDaVIh~a 171 (209)
+.+.+.++++|.||++.
T Consensus 249 ~~l~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTA 265 (384)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHhCCCCEEEECC
Confidence 44888899999999873
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0011 Score=57.81 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=58.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH-HHHHHhh--cCCcEEEEcChh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSEG 173 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~-~sL~~AL--~GvDaVIh~a~g 173 (209)
.+.++|||+||+|.||..+++.+...|.+|.++ +++++.......+++.+. +-.+. +.+.+.. +|+|.||.+.-+
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g~ 226 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDLVYDTLGG 226 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSCT
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceEEEECCCc
Confidence 357799999999999999999999999999998 666554322111234333 22222 2333444 379999988322
Q ss_pred H----HHHHHHhCCCCEEEEeccc
Q 028418 174 F----ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 ~----ll~AA~~aGVkriV~vSS~ 193 (209)
. .++..+.. .++|.+...
T Consensus 227 ~~~~~~~~~l~~~--G~iv~~g~~ 248 (343)
T 3gaz_A 227 PVLDASFSAVKRF--GHVVSCLGW 248 (343)
T ss_dssp HHHHHHHHHEEEE--EEEEESCCC
T ss_pred HHHHHHHHHHhcC--CeEEEEccc
Confidence 2 23333332 467766543
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0005 Score=59.28 Aligned_cols=71 Identities=21% Similarity=0.328 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.++|||+||+|.+|...++.+...|.+|.+.+++.+.. ...++ ++. ..|..+.+.+.+.++++|.||.+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lG--a~~-~i~~~~~~~~~~~~~g~D~v~d~ 222 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALG--AEQ-CINYHEEDFLLAISTPVDAVIDL 222 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHT--CSE-EEETTTSCHHHHCCSCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcC--CCE-EEeCCCcchhhhhccCCCEEEEC
Confidence 4678999999999999999999999999999988544321 12233 222 23566655577888999999987
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0033 Score=56.63 Aligned_cols=95 Identities=12% Similarity=0.052 Sum_probs=60.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--cCCceEEEE--ccCCC----------------HHH
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMA--GDASN----------------KKF 156 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--~~~~vevv~--GDl~D----------------~~s 156 (209)
.+.++|||+||+|.||..+++.+...|.+|.++++++++.... ++...-+-. .|+.+ .+.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 4567999999999999999999999999999999877665322 332111111 12211 233
Q ss_pred HHHhh-cCCcEEEEcChhH----HHHHHHhCCCCEEEEeccc
Q 028418 157 LKTAL-RGVRSIICPSEGF----ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 157 L~~AL-~GvDaVIh~a~g~----ll~AA~~aGVkriV~vSS~ 193 (209)
+.+.. .|+|+||.+.-+. .++..+.. .++|.+++.
T Consensus 299 v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~--G~iv~~G~~ 338 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTGRVTFGLSVIVARRG--GTVVTCGSS 338 (447)
T ss_dssp HHHHHSSCCSEEEECSCHHHHHHHHHHSCTT--CEEEESCCT
T ss_pred HHHHhCCCceEEEECCCchHHHHHHHHHhcC--CEEEEEecC
Confidence 44444 3799999883222 23333332 588888754
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00069 Score=58.41 Aligned_cols=70 Identities=13% Similarity=0.031 Sum_probs=48.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCC-ceEEEEc------cCC-CHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAG------DAS-NKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~-~vevv~G------Dl~-D~~sL~~AL~GvDaVIh~ 170 (209)
++|+|.|+ |.+|+.++..|...|++|.++.|++++....... ++.+... .+. -..++.++++++|.||.+
T Consensus 5 mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 68999996 9999999999999999999999987665432111 1221110 010 112355678899999987
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00051 Score=60.39 Aligned_cols=91 Identities=18% Similarity=0.045 Sum_probs=58.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC---cchhhhcCCceEEEEccCCC--HHHHHHhhcCCcEEEEcC-h
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---RNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPS-E 172 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~---~~a~~~~~~~vevv~GDl~D--~~sL~~AL~GvDaVIh~a-~ 172 (209)
.++|||+|| |.||..+++.+...|.+|.+++|++ ++.......+++.+ | .+ .+.+.+.-.++|.||.+. .
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-SSNGYDKLKDSVGKFDVIIDATGA 256 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-hHHHHHHHHHhCCCCCEEEECCCC
Confidence 789999999 9999999999999999999999987 55432211234555 5 44 123332125899999883 2
Q ss_pred -hHH-HHHHHhC-CCCEEEEeccc
Q 028418 173 -GFI-SNAGSLK-GVQHVILLSQR 193 (209)
Q Consensus 173 -g~l-l~AA~~a-GVkriV~vSS~ 193 (209)
..+ -.+.... .-.++|.++..
T Consensus 257 ~~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 257 DVNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp CTHHHHHHGGGEEEEEEEEECSCC
T ss_pred hHHHHHHHHHHHhcCCEEEEEecC
Confidence 223 2222211 11478887654
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00084 Score=56.70 Aligned_cols=63 Identities=11% Similarity=-0.056 Sum_probs=47.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.|.| .|.+|+.+++.|...|++|.+..|++++.......++.+ ..+ +.++++++|.||.+
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~Dvvi~~ 63 (296)
T 2gf2_A 1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQV----VSS---PADVAEKADRIITM 63 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEE----CSS---HHHHHHHCSEEEEC
T ss_pred CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee----cCC---HHHHHhcCCEEEEe
Confidence 4789998 699999999999999999999999987765443333433 122 44566778998877
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00073 Score=57.21 Aligned_cols=64 Identities=8% Similarity=0.025 Sum_probs=47.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| .|.+|+.+++.|...|++|.+..|++++.......++.+ .. ++.++++++|.||.+
T Consensus 4 ~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~---~~~~~~~~~D~vi~~ 67 (301)
T 3cky_A 4 SIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA----CE---NNQKVAAASDIIFTS 67 (301)
T ss_dssp CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE----CS---SHHHHHHHCSEEEEC
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee----cC---CHHHHHhCCCEEEEE
Confidence 46899998 699999999999999999999989887654433323332 12 245566778988877
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00066 Score=59.22 Aligned_cols=82 Identities=10% Similarity=0.129 Sum_probs=51.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEE-EeCCcch-----hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKRNA-----MESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraL-vR~~~~a-----~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a 171 (209)
+++|.|+||+|.+|+.+++.+.+. ++++.+. +|++... ....+ ... ++.-.+.+.+++..+|+||.++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g--~~~---gv~v~~dl~~ll~~~DVVIDfT 81 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLG--KQT---GVALTDDIERVCAEADYLIDFT 81 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTT--CCC---SCBCBCCHHHHHHHCSEEEECS
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhC--CCC---CceecCCHHHHhcCCCEEEEcC
Confidence 468999999999999999998864 6788875 4553321 11111 000 1211234555666789998772
Q ss_pred -h-h--HHHHHHHhCCCC
Q 028418 172 -E-G--FISNAGSLKGVQ 185 (209)
Q Consensus 172 -~-g--~ll~AA~~aGVk 185 (209)
. . ..+..|.++|+.
T Consensus 82 ~p~a~~~~~~~al~~G~~ 99 (272)
T 4f3y_A 82 LPEGTLVHLDAALRHDVK 99 (272)
T ss_dssp CHHHHHHHHHHHHHHTCE
T ss_pred CHHHHHHHHHHHHHcCCC
Confidence 1 1 156677777865
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00084 Score=61.03 Aligned_cols=94 Identities=10% Similarity=0.038 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC-------------H-------HH
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-------------K-------KF 156 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D-------------~-------~s 156 (209)
.+.++|||+||+|-||...++.+...|.+|.++++++++.......+++.+ .|..+ + +.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAI-IDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEE-EETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEE-EecCcCcccccccccccchHHHHHHHHH
Confidence 457799999999999999999999999999999987766542211122222 12222 1 44
Q ss_pred HHHhh--cCCcEEEEcC-hhH---HHHHHHhCCCCEEEEeccc
Q 028418 157 LKTAL--RGVRSIICPS-EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 157 L~~AL--~GvDaVIh~a-~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
+.++. +|+|+||.+. ..+ .+++.+.. .++|.+++.
T Consensus 306 i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~--G~iv~~G~~ 346 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPGRETFGASVFVTRKG--GTITTCAST 346 (456)
T ss_dssp HHHHHTSCCEEEEEECSCHHHHHHHHHHEEEE--EEEEESCCT
T ss_pred HHHHhCCCCCcEEEEcCCchhHHHHHHHhhCC--cEEEEEecC
Confidence 55555 4799999883 222 23333333 467776543
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00056 Score=57.88 Aligned_cols=63 Identities=14% Similarity=0.051 Sum_probs=47.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
++|.|.| .|.+|+.+++.|...|++|.+..|++++.......++.+ ..+ +.++++++|.||.+
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~~ 68 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----AST---AKAIAEQCDVIITM 68 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CSS---HHHHHHHCSEEEEC
T ss_pred ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEEEEE
Confidence 5899999 699999999999999999999999887654332223332 223 45567788999887
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.001 Score=60.95 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccC------------------CCHHHHHH
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA------------------SNKKFLKT 159 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl------------------~D~~sL~~ 159 (209)
+..+|+|+|+ |-+|..+++.|...|.+|.++.|++.+.......+.+++..++ .+.+.+.+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 5679999998 9999999999999999999999998765433222345443221 13567889
Q ss_pred hhcCCcEEEEc
Q 028418 160 ALRGVRSIICP 170 (209)
Q Consensus 160 AL~GvDaVIh~ 170 (209)
+++++|.||.+
T Consensus 262 ~l~~aDIVI~t 272 (381)
T 3p2y_A 262 AITKFDIVITT 272 (381)
T ss_dssp HHTTCSEEEEC
T ss_pred HHhcCCEEEEC
Confidence 99999999976
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00028 Score=63.44 Aligned_cols=72 Identities=10% Similarity=-0.015 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhh----hcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~----~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.++++|.|+||+|+||+.++..|+.+| .+|++++++.+++.. +... . +...++.-...+.++++++|.||++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~-~-~~~~~i~~t~d~~~al~dADvVvit 83 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-G-FEGLNLTFTSDIKEALTDAKYIVSS 83 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH-C-CTTCCCEEESCHHHHHTTEEEEEEC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC-c-CCCCceEEcCCHHHHhCCCCEEEEc
Confidence 346799999999999999999999988 589999887654431 1100 0 0001111123467889999999998
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00024 Score=60.73 Aligned_cols=67 Identities=16% Similarity=0.094 Sum_probs=46.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..++++|+|+ |.+|+.++..|.+.|++|.+..|+++++... ++....+...|+ +.+.+ .++|.||++
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~ 187 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINA 187 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEEC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEEC
Confidence 4679999998 7899999999999999999999988765322 111001222232 22222 588999987
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0021 Score=59.33 Aligned_cols=72 Identities=10% Similarity=0.012 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEcc----------------CCC------HH
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGD----------------ASN------KK 155 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GD----------------l~D------~~ 155 (209)
+..+|+|+|+ |-+|..+++.|...|.+|.+.+|++.+.......+.+++..+ +++ ..
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 4579999999 999999999999999999999998876433221223443322 122 46
Q ss_pred HHHHhhcCCcEEEEc
Q 028418 156 FLKTALRGVRSIICP 170 (209)
Q Consensus 156 sL~~AL~GvDaVIh~ 170 (209)
.+.++++++|.||.+
T Consensus 268 ~l~e~l~~aDVVI~t 282 (405)
T 4dio_A 268 LVAEHIAKQDIVITT 282 (405)
T ss_dssp HHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCEEEEC
Confidence 899999999999987
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0013 Score=57.85 Aligned_cols=94 Identities=10% Similarity=0.084 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--hcCCceEEEEccCCC-HHHHHHhhc--CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASN-KKFLKTALR--GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D-~~sL~~AL~--GvDaVIh~a 171 (209)
.+.++|||+| +|.||...++.+...|.+|.++++++++... .++. ..++.-+-.| .+.+.+... |+|.||.+.
T Consensus 188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~ 265 (363)
T 3uog_A 188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA-DHGINRLEEDWVERVYALTGDRGADHILEIA 265 (363)
T ss_dssp CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC-SEEEETTTSCHHHHHHHHHTTCCEEEEEEET
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC-CEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 3567999999 8999999999999999999999988765432 2332 1233211112 233444443 799999872
Q ss_pred hh----HHHHHHHhCCCCEEEEecccc
Q 028418 172 EG----FISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 ~g----~ll~AA~~aGVkriV~vSS~~ 194 (209)
-+ ..+++.+.. .++|.++...
T Consensus 266 g~~~~~~~~~~l~~~--G~iv~~G~~~ 290 (363)
T 3uog_A 266 GGAGLGQSLKAVAPD--GRISVIGVLE 290 (363)
T ss_dssp TSSCHHHHHHHEEEE--EEEEEECCCS
T ss_pred ChHHHHHHHHHhhcC--CEEEEEecCC
Confidence 12 234444443 4788776543
|
| >2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.003 Score=55.36 Aligned_cols=86 Identities=17% Similarity=0.132 Sum_probs=56.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhc--C-CcEEEEcC-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--G-VRSIICPS- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~--G-vDaVIh~a- 171 (209)
.++.+++|.|+||..|+.+++.|++.|+++.+.+ +|.+. .... ++.++ . ++.++.+ + +|.++.+.
T Consensus 11 ~~~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~V-nP~~~g~~i~--G~~vy----~---sl~el~~~~~~~DvaIi~vp 80 (297)
T 2yv2_A 11 DSETRVLVQGITGREGSFHAKAMLEYGTKVVAGV-TPGKGGSEVH--GVPVY----D---SVKEALAEHPEINTSIVFVP 80 (297)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTTCEET--TEEEE----S---SHHHHHHHCTTCCEEEECCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHhCCCcEEEEe-CCCCCCceEC--CEeee----C---CHHHHhhcCCCCCEEEEecC
Confidence 3566789999999999999999999999955555 45432 1111 23332 2 2444454 5 89888762
Q ss_pred -hh--HHHHHHHhCCCCEEEEecc
Q 028418 172 -EG--FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 -~g--~ll~AA~~aGVkriV~vSS 192 (209)
.. .+++.|.++|++.+|.+++
T Consensus 81 ~~~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 81 APFAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEECC
Confidence 22 2677778889887776654
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0036 Score=54.97 Aligned_cols=94 Identities=12% Similarity=0.044 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC-----HHHHHHhh-cCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN-----KKFLKTAL-RGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D-----~~sL~~AL-~GvDaVIh 169 (209)
.+.++|||+|+ |-||...++.+...|. +|.++++++++.......+++.+ .|..+ .+.+.++. .++|.||.
T Consensus 191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid 268 (374)
T 1cdo_A 191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQVLSKMTNGGVDFSLE 268 (374)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHHHHHHhCCCCCEEEE
Confidence 35679999996 9999999998888998 79999888876543222223322 23332 12233333 27999998
Q ss_pred cC-h-hHH---HHHHHhCCCCEEEEeccc
Q 028418 170 PS-E-GFI---SNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 170 ~a-~-g~l---l~AA~~aGVkriV~vSS~ 193 (209)
+. . .++ +++.+.. -.++|.++..
T Consensus 269 ~~g~~~~~~~~~~~l~~~-~G~iv~~G~~ 296 (374)
T 1cdo_A 269 CVGNVGVMRNALESCLKG-WGVSVLVGWT 296 (374)
T ss_dssp CSCCHHHHHHHHHTBCTT-TCEEEECSCC
T ss_pred CCCCHHHHHHHHHHhhcC-CcEEEEEcCC
Confidence 83 2 222 2222222 1488887653
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0012 Score=56.86 Aligned_cols=63 Identities=5% Similarity=-0.140 Sum_probs=48.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| .|.+|+.+++.|.++||+|.+..|++++.......++.+ . .++.++++ +|.||.+
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~---~~~~~~~~-aDvvi~~ 77 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATL----A---DSVADVAA-ADLIHIT 77 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEE----C---SSHHHHTT-SSEEEEC
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEE----c---CCHHHHHh-CCEEEEE
Confidence 35799998 699999999999999999999999998765443333332 1 24556677 8888877
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0013 Score=57.39 Aligned_cols=66 Identities=9% Similarity=0.018 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..++++|+|+ |.+|+.++..|.+.|. +|.+..|+++++..... .+..+ ..+.+.++++++|.||.+
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~~~-----~~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NINKI-----NLSHAESHLDEFDIIINT 182 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hcccc-----cHhhHHHHhcCCCEEEEC
Confidence 4578999997 8999999999999998 89999999988765432 22222 345677788899999987
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0012 Score=56.81 Aligned_cols=89 Identities=10% Similarity=0.019 Sum_probs=53.6
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH--HHHHHhh-cCCcEEEEcC-hhH--
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK--KFLKTAL-RGVRSIICPS-EGF-- 174 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~--~sL~~AL-~GvDaVIh~a-~g~-- 174 (209)
+|||+||+|.+|...++.+...|.+|.++++++++.......+++.+ .|..+. +.+.+.. .++|.||.+. ...
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 230 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGGRTLA 230 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE-EECC---------CCSCCEEEEEECSTTTTHH
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEE-EecCCcHHHHHHHhcCCcccEEEECCcHHHHH
Confidence 89999999999999999999999999999998766432211223222 244443 2222222 3689999873 222
Q ss_pred -HHHHHHhCCCCEEEEecc
Q 028418 175 -ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 175 -ll~AA~~aGVkriV~vSS 192 (209)
.++.++.. .++|.++.
T Consensus 231 ~~~~~l~~~--G~~v~~G~ 247 (328)
T 1xa0_A 231 TVLSRMRYG--GAVAVSGL 247 (328)
T ss_dssp HHHHTEEEE--EEEEECSC
T ss_pred HHHHhhccC--CEEEEEee
Confidence 22222222 46777654
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0014 Score=57.06 Aligned_cols=70 Identities=13% Similarity=0.195 Sum_probs=52.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhc---C---CceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF---G---TYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~---~---~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
...+++||+|| |.+|+.++..|...|. +|.+..|+++++.... . ..+++...++ +.+.++++++|.||.
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVIn 200 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVVN 200 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEEE
Confidence 44679999998 8999999999999998 6999999987764321 1 1233434443 346677888999998
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 201 a 201 (283)
T 3jyo_A 201 A 201 (283)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0018 Score=56.39 Aligned_cols=92 Identities=10% Similarity=0.099 Sum_probs=57.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC--HHHHHHhh-cCCcEEEEcC-hh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTAL-RGVRSIICPS-EG 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D--~~sL~~AL-~GvDaVIh~a-~g 173 (209)
+.++|||+||+|.||...++.+...|.+|.++++++++.......+++.+ .|..+ .+.+.+.- +++|+||.+. ..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g~~ 228 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIV-LNHKESLLNQFKTQGIELVDYVFCTFNTD 228 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEE-ECTTSCHHHHHHHHTCCCEEEEEESSCHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEE-EECCccHHHHHHHhCCCCccEEEECCCch
Confidence 67899999999999999999999999999999987765432211122222 12322 22333331 3799999883 22
Q ss_pred H----HHHHHHhCCCCEEEEecc
Q 028418 174 F----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 174 ~----ll~AA~~aGVkriV~vSS 192 (209)
. .+++.+.. .++|.+..
T Consensus 229 ~~~~~~~~~l~~~--G~iv~~~~ 249 (346)
T 3fbg_A 229 MYYDDMIQLVKPR--GHIATIVA 249 (346)
T ss_dssp HHHHHHHHHEEEE--EEEEESSC
T ss_pred HHHHHHHHHhccC--CEEEEECC
Confidence 2 23333333 46766543
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0039 Score=54.81 Aligned_cols=94 Identities=10% Similarity=0.005 Sum_probs=57.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC-----HHHHHHhh-cCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN-----KKFLKTAL-RGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D-----~~sL~~AL-~GvDaVIh 169 (209)
.+.++|||+|+ |-||...++.+...|. +|.++++++++......-+++.+ .|..+ .+.+.++. .|+|.||.
T Consensus 194 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~Dvvid 271 (376)
T 1e3i_A 194 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDVITELTAGGVDYSLD 271 (376)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHHHHHHHHhCCCccEEEE
Confidence 35679999996 9999999998888998 79999888876543222223322 23332 12333333 37999998
Q ss_pred cC-h-hHHHHHHHhCC-C-CEEEEecc
Q 028418 170 PS-E-GFISNAGSLKG-V-QHVILLSQ 192 (209)
Q Consensus 170 ~a-~-g~ll~AA~~aG-V-kriV~vSS 192 (209)
+. . .++-++.+... - .++|.++.
T Consensus 272 ~~G~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 272 CAGTAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCCCHHHHHHHHHHhhcCCCEEEEECC
Confidence 83 2 22322222211 1 48887764
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0048 Score=54.34 Aligned_cols=95 Identities=12% Similarity=0.027 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCC----C-HHHHHHhhc-CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDAS----N-KKFLKTALR-GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~----D-~~sL~~AL~-GvDaVIh 169 (209)
.+.++|||+|| |.||...++.+...|. +|.++.+++++......-+++.+ .|.. + .+.+.++.. |+|+||.
T Consensus 192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~~~gg~D~vid 269 (378)
T 3uko_A 192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF-VNPKDHDKPIQEVIVDLTDGGVDYSFE 269 (378)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEE-EccccCchhHHHHHHHhcCCCCCEEEE
Confidence 45779999998 9999999998888998 89999988877653333333332 2332 1 233343332 7999998
Q ss_pred cC-h-hHHHHHHHhCC--CCEEEEeccc
Q 028418 170 PS-E-GFISNAGSLKG--VQHVILLSQR 193 (209)
Q Consensus 170 ~a-~-g~ll~AA~~aG--VkriV~vSS~ 193 (209)
+. . .++-.+.+... -.++|.++..
T Consensus 270 ~~g~~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 270 CIGNVSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp CSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCCCHHHHHHHHHHhhccCCEEEEEccc
Confidence 83 2 23333322222 2688887653
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0026 Score=56.47 Aligned_cols=73 Identities=10% Similarity=0.063 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeC---Ccchhhhc---C--CceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMESF---G--TYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~---~~~a~~~~---~--~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
...+++||+|| |.+|+.++..|.+.|. +|.+..|+ .+++..+. . .+..+...++.+.+.+.+++.++|.|
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 45679999998 8999999999999998 79999999 54443221 1 12334455677765567778889999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|.+
T Consensus 225 INa 227 (312)
T 3t4e_A 225 TNG 227 (312)
T ss_dssp EEC
T ss_pred EEC
Confidence 987
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0066 Score=53.65 Aligned_cols=70 Identities=10% Similarity=0.088 Sum_probs=55.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
.++++|+|.| .|.+|+++++.+.+.|++|.++..++........ -+.+..|+.|.+.+.+.++.+|+|..
T Consensus 12 ~~~k~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 12 LPGKTIGIIG-GGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVA--DIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CTTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTC--SEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhC--CceEecCcCCHHHHHHHHHhCCEeee
Confidence 4677999998 5679999999999999999999876643221111 24677899999999999999998854
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00052 Score=57.36 Aligned_cols=64 Identities=13% Similarity=0.106 Sum_probs=47.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.|+ |.+|+.+++.|...|++ |.+..|++++....... ++.+. . ++.++++++|.||.+
T Consensus 10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~----~---~~~~~~~~~Dvvi~a 75 (266)
T 3d1l_A 10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT----T---DLAEVNPYAKLYIVS 75 (266)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE----S---CGGGSCSCCSEEEEC
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee----C---CHHHHhcCCCEEEEe
Confidence 568999997 99999999999999999 88888887765432211 23321 2 234567899999988
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.00038 Score=63.32 Aligned_cols=70 Identities=9% Similarity=-0.051 Sum_probs=48.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEE-------------EccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv-------------~GDl~D~~sL~~AL~GvDa 166 (209)
|+|.|.| +|.+|..++..|.+.|++|.+++|++++..........+. .+.+.-..++.++++++|.
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv 79 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence 4799998 7999999999999999999999998876543322110000 0111112235567889999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
||.+
T Consensus 80 viia 83 (436)
T 1mv8_A 80 SFIC 83 (436)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9987
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0014 Score=56.16 Aligned_cols=64 Identities=3% Similarity=-0.064 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.++|.|.| .|.+|+.++..|...|++|.+..|++++.......++.+ ..+ +.++++++|.||.+
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~DvVi~a 93 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL----GRT---PAEVVSTCDITFAC 93 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE----CSC---HHHHHHHCSEEEEC
T ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE----cCC---HHHHHhcCCEEEEe
Confidence 46899999 599999999999999999999999887664332223332 122 44567788988877
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0045 Score=54.36 Aligned_cols=93 Identities=11% Similarity=0.038 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC-----HHHHHHhh-cCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN-----KKFLKTAL-RGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D-----~~sL~~AL-~GvDaVIh 169 (209)
.+.++|||+|+ |-||..+++.+...|. +|.++++++++.......+++.+ .|..+ .+.+.++. .++|.||.
T Consensus 190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid 267 (374)
T 2jhf_A 190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC-VNPQDYKKPIQEVLTEMSNGGVDFSFE 267 (374)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE-ecccccchhHHHHHHHHhCCCCcEEEE
Confidence 35679999995 9999999998888998 79999888876543221223322 23332 12333333 27999998
Q ss_pred cC-h-hHH---HHHHHhCCCCEEEEecc
Q 028418 170 PS-E-GFI---SNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 170 ~a-~-g~l---l~AA~~aGVkriV~vSS 192 (209)
+. . .++ +++.+.. -.++|.++.
T Consensus 268 ~~g~~~~~~~~~~~l~~~-~G~iv~~G~ 294 (374)
T 2jhf_A 268 VIGRLDTMVTALSCCQEA-YGVSVIVGV 294 (374)
T ss_dssp CSCCHHHHHHHHHHBCTT-TCEEEECSC
T ss_pred CCCCHHHHHHHHHHhhcC-CcEEEEecc
Confidence 83 2 222 3333332 147887764
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0019 Score=58.71 Aligned_cols=73 Identities=12% Similarity=0.055 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCC-------------CH-------HH
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-------------NK-------KF 156 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~-------------D~-------~s 156 (209)
.+..+|+|+|+ |-+|..+++.|...|.+|.+..|++.+.......+.+++..|.. +. +.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 45679999996 99999999999999999999999887643322123444422221 11 24
Q ss_pred HHHhhcCCcEEEEc
Q 028418 157 LKTALRGVRSIICP 170 (209)
Q Consensus 157 L~~AL~GvDaVIh~ 170 (209)
+.++++++|.||.+
T Consensus 249 l~e~~~~aDvVI~~ 262 (401)
T 1x13_A 249 FAAQAKEVDIIVTT 262 (401)
T ss_dssp HHHHHHHCSEEEEC
T ss_pred HHHHhCCCCEEEEC
Confidence 78888999999987
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00094 Score=57.77 Aligned_cols=65 Identities=15% Similarity=0.096 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+++|.|.| .|.+|+.+++.|++.|++|.+..|++++.......++.. ..++.++++++|.||.+
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-------~~~~~e~~~~aDvVi~~ 72 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHL-------CESVKAALSASPATIFV 72 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEE-------CSSHHHHHHHSSEEEEC
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-------cCCHHHHHhcCCEEEEE
Confidence 356899997 699999999999999999999999987664432222222 12345666777887776
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0012 Score=54.37 Aligned_cols=64 Identities=6% Similarity=-0.052 Sum_probs=46.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEE-EEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~Vra-LvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| +|.+|+.+++.|.+.|++|.+ ..|+++++..... .++.... .+ .++++++|.||.+
T Consensus 23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~----~~~~~~aDvVila 88 (220)
T 4huj_A 23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA---VE----LKDALQADVVILA 88 (220)
T ss_dssp SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CC----HHHHTTSSEEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc---Ch----HHHHhcCCEEEEe
Confidence 57899999 899999999999999999999 7788876643211 0122221 12 3457889999987
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0013 Score=55.05 Aligned_cols=70 Identities=7% Similarity=-0.016 Sum_probs=48.2
Q ss_pred cccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc--------------hhhhcCCceEEEEccCCCHHHHHH
Q 028418 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--------------AMESFGTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 94 ~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~--------------a~~~~~~~vevv~GDl~D~~sL~~ 159 (209)
+.....++|.|.| +|.+|+.+++.|++.|++|.+..|++++ ....... . + .....++.+
T Consensus 14 ~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~----~-~~~~~~~~e 86 (245)
T 3dtt_A 14 NLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-H----P-HVHLAAFAD 86 (245)
T ss_dssp -----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG-S----T-TCEEEEHHH
T ss_pred ccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-c----C-ceeccCHHH
Confidence 3456678999996 9999999999999999999999998876 2111110 0 0 011234567
Q ss_pred hhcCCcEEEEc
Q 028418 160 ALRGVRSIICP 170 (209)
Q Consensus 160 AL~GvDaVIh~ 170 (209)
+++++|.||.+
T Consensus 87 ~~~~aDvVila 97 (245)
T 3dtt_A 87 VAAGAELVVNA 97 (245)
T ss_dssp HHHHCSEEEEC
T ss_pred HHhcCCEEEEc
Confidence 88899999987
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0034 Score=55.04 Aligned_cols=95 Identities=14% Similarity=0.029 Sum_probs=57.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC-----HHHHHHhh-cCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN-----KKFLKTAL-RGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D-----~~sL~~AL-~GvDaVIh 169 (209)
.+.++|||+|+ |.||...++.+...|. +|.++++++++......-+++.+ .|..+ .+.+.++. .|+|.||.
T Consensus 189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~D~vid 266 (373)
T 2fzw_A 189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC-INPQDFSKPIQEVLIEMTDGGVDYSFE 266 (373)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE-eccccccccHHHHHHHHhCCCCCEEEE
Confidence 35679999996 9999999988888898 79999888876532211122222 23332 12333333 27999998
Q ss_pred cC-h-hHHHHHHHhCC-C-CEEEEeccc
Q 028418 170 PS-E-GFISNAGSLKG-V-QHVILLSQR 193 (209)
Q Consensus 170 ~a-~-g~ll~AA~~aG-V-kriV~vSS~ 193 (209)
+. . .++-++.+... - .++|.++..
T Consensus 267 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 294 (373)
T 2fzw_A 267 CIGNVKVMRAALEACHKGWGVSVVVGVA 294 (373)
T ss_dssp CSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCCcHHHHHHHHHhhccCCcEEEEEecC
Confidence 83 2 22222222212 1 488887643
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0018 Score=55.58 Aligned_cols=65 Identities=8% Similarity=-0.095 Sum_probs=46.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| .|.+|+.+++.|.+.|++|.+..|++++.......++..+.. ++.++++++|.||.+
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~------~~~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAA------SAREFAGVVDALVIL 71 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEES------SSTTTTTTCSEEEEC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccC------CHHHHHhcCCEEEEE
Confidence 46899996 699999999999999999999999987654332222222111 234566777777766
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0023 Score=56.15 Aligned_cols=93 Identities=15% Similarity=0.072 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhhhcCCceEEEEccCCCH--HHHHHhhc--CCcEEEEcC-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNK--KFLKTALR--GVRSIICPS- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~--~sL~~AL~--GvDaVIh~a- 171 (209)
+.++|||+|| |-+|...++.+... |.+|.++++++++......-+++.+ .|..+. +.+.+... |+|.||.+.
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~v~~~~~g~g~Dvvid~~G 263 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHV-VDARRDPVKQVMELTRGRGVNVAMDFVG 263 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEE-EETTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEE-EeccchHHHHHHHHhCCCCCcEEEECCC
Confidence 5679999999 99999999888888 9999999988766432221223222 245444 34444443 699999883
Q ss_pred hhH--HHHHHHhCCCCEEEEecc
Q 028418 172 EGF--ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~--ll~AA~~aGVkriV~vSS 192 (209)
... .++.+.+..-.++|.++.
T Consensus 264 ~~~~~~~~~~~~~~~G~~v~~g~ 286 (359)
T 1h2b_A 264 SQATVDYTPYLLGRMGRLIIVGY 286 (359)
T ss_dssp CHHHHHHGGGGEEEEEEEEECCC
T ss_pred CchHHHHHHHhhcCCCEEEEEeC
Confidence 221 333333222246777654
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00099 Score=55.44 Aligned_cols=64 Identities=9% Similarity=-0.003 Sum_probs=47.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| +|.+|+.+++.|...|++|.+..|++++....... ++.+ ..+ +.++++++|.||.+
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~Vi~~ 67 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AMS---HQDLIDQVDLVILG 67 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CSS---HHHHHHTCSEEEEC
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe----eCC---HHHHHhcCCEEEEE
Confidence 46899999 79999999999999999999998988765432110 1221 223 45667789999987
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0039 Score=58.82 Aligned_cols=90 Identities=12% Similarity=0.145 Sum_probs=62.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCC-C---cEEEEEeCCcch--hhhcCCceEEEEccC--CCH-HHHHHhhcCCcEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKR-T---RIKALVKDKRNA--MESFGTYVESMAGDA--SNK-KFLKTALRGVRSII 168 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G-~---~VraLvR~~~~a--~~~~~~~vevv~GDl--~D~-~sL~~AL~GvDaVI 168 (209)
..++|||.| .|.||+.+++.|.++. + +|.+..++.... ....+ +.+...++ .|. +.+.+++++.|.||
T Consensus 12 ~~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g--~~~~~~~Vdadnv~~~l~aLl~~~DvVI 88 (480)
T 2ph5_A 12 FKNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYG--VSFKLQQITPQNYLEVIGSTLEENDFLI 88 (480)
T ss_dssp CCSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHT--CEEEECCCCTTTHHHHTGGGCCTTCEEE
T ss_pred CCCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcC--CceeEEeccchhHHHHHHHHhcCCCEEE
Confidence 456899999 8999999999888754 4 677776554432 12223 45555555 444 34667888789999
Q ss_pred EcC----hhHHHHHHHhCCCCEEEEeccc
Q 028418 169 CPS----EGFISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 169 h~a----~g~ll~AA~~aGVkriV~vSS~ 193 (209)
+++ .-.++++|.++||- |+++.
T Consensus 89 N~s~~~~~l~Im~acleaGv~---YlDTa 114 (480)
T 2ph5_A 89 DVSIGISSLALIILCNQKGAL---YINAA 114 (480)
T ss_dssp ECCSSSCHHHHHHHHHHHTCE---EEESS
T ss_pred ECCccccCHHHHHHHHHcCCC---EEECC
Confidence 873 22489999999964 45554
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.01 Score=51.61 Aligned_cols=69 Identities=9% Similarity=0.027 Sum_probs=53.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEcc-CCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGD-ASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GD-l~D~~sL~~AL~GvDaVIh~ 170 (209)
|++|+|+| .|..|..++..+.+.|++|.++..++......+. -+++..| ..|.+.+....+++|+|+-.
T Consensus 1 MK~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~a--D~~~~~~~~~d~~~~~~~~~~~D~v~~~ 70 (363)
T 4ffl_A 1 MKTICLVG-GKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYA--DEFYCFDVIKEPEKLLELSKRVDAVLPV 70 (363)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTS--SEEEECCTTTCHHHHHHHHTSSSEEEEC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhC--CEEEECCCCcCHHHHHHHhcCCCEEEEC
Confidence 68999999 5799999999999999999999887754332222 2444445 46888888888999998754
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0036 Score=55.84 Aligned_cols=68 Identities=7% Similarity=0.180 Sum_probs=50.0
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh----hh-----cCCceEEEEccCCCHHHHHHhhcC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ES-----FGTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~----~~-----~~~~vevv~GDl~D~~sL~~AL~G 163 (209)
.+..+++|.|+|| |.+|+.++..|+..+. +++.++++++++. .+ +...+.+..+| .+++++
T Consensus 5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~ 76 (326)
T 3vku_A 5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKD 76 (326)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTT
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcC
Confidence 3566789999997 9999999999998887 8999988776443 11 11234555443 468999
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.||++
T Consensus 77 aDiVvi~ 83 (326)
T 3vku_A 77 ADLVVIT 83 (326)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9999998
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0035 Score=51.37 Aligned_cols=37 Identities=5% Similarity=0.073 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
...++|.|.| +|.+|+.++..|.++|++|.+..|+++
T Consensus 17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4467899999 799999999999999999999988765
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0048 Score=54.83 Aligned_cols=71 Identities=10% Similarity=0.063 Sum_probs=51.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC----HHHHHHhhc--CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN----KKFLKTALR--GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D----~~sL~~AL~--GvDaVIh 169 (209)
.+.++|||+|+ |-||...++.+...|. +|.++++++++......-+++++ |..+ .+.+.+... |+|.||.
T Consensus 184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI--DLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEE--ETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE--cCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 45789999997 9999999988888898 89999988876543333345543 4443 344555543 6999998
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 261 ~ 261 (398)
T 2dph_A 261 A 261 (398)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.001 Score=60.76 Aligned_cols=88 Identities=16% Similarity=0.135 Sum_probs=51.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcch----hhhcC-----------CceEEEEccCCCHHHHHHhhc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA----MESFG-----------TYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a----~~~~~-----------~~vevv~GDl~D~~sL~~AL~ 162 (209)
+.+|.|.||||++|+.+++.|.++- .++..+.-+.+.+ ...++ ....+.. +.+. +.+.
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~--~~~~----~~~~ 92 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQE--CKPE----GNFL 92 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEE--SSSC----TTGG
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEe--Cchh----hhcc
Confidence 4579999999999999999776643 4566554222211 11111 0111211 1111 1367
Q ss_pred CCcEEEEc-ChhH---HHHHHHhCCCCEEEEeccc
Q 028418 163 GVRSIICP-SEGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 163 GvDaVIh~-a~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
+||.||.+ ..+. ++..+.++|++ +|=+|+.
T Consensus 93 ~~Dvvf~alp~~~s~~~~~~~~~~G~~-VIDlSa~ 126 (381)
T 3hsk_A 93 ECDVVFSGLDADVAGDIEKSFVEAGLA-VVSNAKN 126 (381)
T ss_dssp GCSEEEECCCHHHHHHHHHHHHHTTCE-EEECCST
T ss_pred cCCEEEECCChhHHHHHHHHHHhCCCE-EEEcCCc
Confidence 99999998 3332 66667788876 6656654
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.00084 Score=60.73 Aligned_cols=66 Identities=20% Similarity=0.255 Sum_probs=51.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.++|+|.|+ |.+|+.+++.|...|. +|.+..|+++++.. .++ ++++ +.+.+.+++.++|.||.+
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g--~~~~-----~~~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--GEAV-----RFDELVDHLARSDVVVSA 234 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--CEEC-----CGGGHHHHHHTCSEEEEC
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--Ccee-----cHHhHHHHhcCCCEEEEc
Confidence 46789999998 9999999999999998 89999998876522 223 3322 234577888999999987
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.00093 Score=55.98 Aligned_cols=62 Identities=11% Similarity=-0.005 Sum_probs=44.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|++|.|.| .|.+|+.++..|.. |++|.+..|++++.......++... + +.++++++|.||.+
T Consensus 1 M~~i~iiG-~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~--~------~~~~~~~~D~vi~~ 62 (289)
T 2cvz_A 1 MEKVAFIG-LGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEA--V------PLERVAEARVIFTC 62 (289)
T ss_dssp -CCEEEEC-CSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEE--C------CGGGGGGCSEEEEC
T ss_pred CCeEEEEc-ccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCccc--C------HHHHHhCCCEEEEe
Confidence 36799998 49999999999999 9999999998876543221122221 1 34566788888877
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.002 Score=54.22 Aligned_cols=63 Identities=8% Similarity=-0.095 Sum_probs=45.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.| .|.+|+.+++.|...|++|.+.. ++++.......++.+ ..++.++++++|.||.+
T Consensus 3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~-------~~~~~~~~~~~D~vi~~ 65 (295)
T 1yb4_A 3 AMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVN-------VETARQVTEFADIIFIM 65 (295)
T ss_dssp -CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBC-------CSSHHHHHHTCSEEEEC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcc-------cCCHHHHHhcCCEEEEE
Confidence 46899998 69999999999999999999887 776654332222211 12345667788888877
|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.015 Score=48.16 Aligned_cols=77 Identities=17% Similarity=0.079 Sum_probs=48.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEE-EeCCcchhhhcCCceEEEEccCCCHHHHHHhh-cCCcEEEEcC-hhH--
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICPS-EGF-- 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraL-vR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-~GvDaVIh~a-~g~-- 174 (209)
++|.|.|+ |.+|+.+++.|...|++|.++ .|++ ++.. + +.|+ .+++ .++|+||.+. ...
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~~--------~---~~~~---~~l~~~~~DvVv~~~~~~~~~ 64 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRG-EHEK--------M---VRGI---DEFLQREMDVAVEAASQQAVK 64 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC-CCTT--------E---ESSH---HHHTTSCCSEEEECSCHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCc-chhh--------h---cCCH---HHHhcCCCCEEEECCCHHHHH
Confidence 47999997 999999999999899998654 4553 2211 1 2333 4445 6889888772 111
Q ss_pred -HHHHHHhCCCCEEEEeccc
Q 028418 175 -ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 -ll~AA~~aGVkriV~vSS~ 193 (209)
++..+.++| +++|-.|+.
T Consensus 65 ~~~~~~l~~G-~~vv~~~~~ 83 (236)
T 2dc1_A 65 DYAEKILKAG-IDLIVLSTG 83 (236)
T ss_dssp HHHHHHHHTT-CEEEESCGG
T ss_pred HHHHHHHHCC-CcEEEECcc
Confidence 334445555 345544443
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.015 Score=50.78 Aligned_cols=87 Identities=16% Similarity=0.138 Sum_probs=57.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh----hc------CCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME----SF------GTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~----~~------~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
+++|.|+|| |.+|..++..|...|+ +|+.++++++++.. .. .....+.. .+| + ++++++|.|
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~--t~d---~-~a~~~aD~V 74 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG--TNN---Y-ADTANSDVI 74 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE--ESC---G-GGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE--CCC---H-HHHCCCCEE
Confidence 368999999 9999999999999997 88888887765431 10 11122221 022 3 679999999
Q ss_pred EEcC-----hh---------------HHHHHHHhCCCCEEEEecc
Q 028418 168 ICPS-----EG---------------FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 168 Ih~a-----~g---------------~ll~AA~~aGVkriV~vSS 192 (209)
|.++ .| .+.+++.+...+.+|.+.|
T Consensus 75 i~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 75 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp EECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 9982 11 0445555666666666654
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0021 Score=55.64 Aligned_cols=92 Identities=11% Similarity=0.086 Sum_probs=58.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhhcCCcEEEEcC-h
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTALRGVRSIICPS-E 172 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL~GvDaVIh~a-~ 172 (209)
.+.++|||+|| |-||...++.+...|.+|.++++++++.......+++.+ .|..+.+ .+.+...++|.||.+. .
T Consensus 165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~g~~d~vid~~g~ 242 (340)
T 3s2e_A 165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVA-VNARDTDPAAWLQKEIGGAHGVLVTAVS 242 (340)
T ss_dssp CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHhCCCCCEEEEeCCC
Confidence 46789999997 889999999999999999999998876543222223222 2444433 3333334889999872 2
Q ss_pred hH----HHHHHHhCCCCEEEEecc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS 192 (209)
+. .++..+.. .++|.++.
T Consensus 243 ~~~~~~~~~~l~~~--G~iv~~G~ 264 (340)
T 3s2e_A 243 PKAFSQAIGMVRRG--GTIALNGL 264 (340)
T ss_dssp HHHHHHHHHHEEEE--EEEEECSC
T ss_pred HHHHHHHHHHhccC--CEEEEeCC
Confidence 22 23333333 46776654
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.004 Score=53.41 Aligned_cols=64 Identities=9% Similarity=0.081 Sum_probs=49.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+++|.|.|+ |.+|+.++..|+++|+ +|.+..|++++....... ++.+. .+..++++++|.||.+
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~-------~~~~~~~~~aDvVila 70 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT-------QDNRQGALNADVVVLA 70 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE-------SCHHHHHSSCSEEEEC
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe-------CChHHHHhcCCeEEEE
Confidence 468999988 9999999999999999 999999999876543221 34331 2345678999999987
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0062 Score=53.81 Aligned_cols=66 Identities=18% Similarity=0.122 Sum_probs=47.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhh----------cCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~----------~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
+++|.|+|| |.+|..++..|...|+ +|+..+++++++... ......+.. ...+.++++++|.|
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~~ea~~~aDiV 82 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTGADCV 82 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-----eCCHHHHhCCCCEE
Confidence 468999998 9999999999999998 999998988654320 111111111 12356689999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|.+
T Consensus 83 i~a 85 (331)
T 1pzg_A 83 IVT 85 (331)
T ss_dssp EEC
T ss_pred EEc
Confidence 987
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0052 Score=51.06 Aligned_cols=66 Identities=9% Similarity=0.028 Sum_probs=46.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--C-CceEE-EEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--G-TYVES-MAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~-~~vev-v~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.|.|+ |.+|+.++..|.++|++|.+..|++++..... + .+..+ ......+ .++++++|.||.+
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~d~vi~~ 70 (291)
T 1ks9_A 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND----PDFLATSDLLLVT 70 (291)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC----HHHHHTCSEEEEC
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC----ccccCCCCEEEEE
Confidence 47999998 99999999999999999999999887543221 1 01110 0011123 2466789999988
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0049 Score=52.80 Aligned_cols=65 Identities=15% Similarity=0.132 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.. +++|.|+ |.+|+.++..|+..|. +|.+..|+++++..+.. ....+ ..+.+.++++++|.||.+
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~-~~~~~-----~~~~~~~~~~~aDiVIna 173 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF-PVKIF-----SLDQLDEVVKKAKSLFNT 173 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS-SCEEE-----EGGGHHHHHHTCSEEEEC
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-HcccC-----CHHHHHhhhcCCCEEEEC
Confidence 34 8999997 9999999999999998 99999999988765432 22221 234567788999999986
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0076 Score=52.85 Aligned_cols=95 Identities=13% Similarity=0.058 Sum_probs=57.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC-----HHHHHHhh-cCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN-----KKFLKTAL-RGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D-----~~sL~~AL-~GvDaVIh 169 (209)
.+.++|||+|+ |.||...++.+...|. +|.++++++++.......+++.+ .|..+ .+.+.++. .|+|.||.
T Consensus 190 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~t~gg~Dvvid 267 (373)
T 1p0f_A 190 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATEC-LNPKDYDKPIYEVICEKTNGGVDYAVE 267 (373)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEE-EecccccchHHHHHHHHhCCCCCEEEE
Confidence 35679999996 9999999988888898 79999888776543222223322 23332 12333333 27999998
Q ss_pred cC-h-hHHHHHHHhC--CCCEEEEeccc
Q 028418 170 PS-E-GFISNAGSLK--GVQHVILLSQR 193 (209)
Q Consensus 170 ~a-~-g~ll~AA~~a--GVkriV~vSS~ 193 (209)
+. . .++-.+.+.. +-.++|.+...
T Consensus 268 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 295 (373)
T 1p0f_A 268 CAGRIETMMNALQSTYCGSGVTVVLGLA 295 (373)
T ss_dssp CSCCHHHHHHHHHTBCTTTCEEEECCCC
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEccC
Confidence 83 2 2332322221 21488877643
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0033 Score=56.76 Aligned_cols=87 Identities=16% Similarity=0.107 Sum_probs=52.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCc---chhhhcC-----------CceEEEEccCCCHHHHHHhhcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR---NAMESFG-----------TYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~---~a~~~~~-----------~~vevv~GDl~D~~sL~~AL~G 163 (209)
+.+|.|.||||++|+.+++.|.+.- .+++.+..+.+ +....++ ....+.. .+++ .+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~---~~~~----~~~~ 79 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKP---TDPK----LMDD 79 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEE---CCGG----GCTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEe---CCHH----HhcC
Confidence 3579999999999999999665532 46777764332 1111111 0111111 1222 3579
Q ss_pred CcEEEEc-Chh---HHHHHHHhCCCCEEEEeccc
Q 028418 164 VRSIICP-SEG---FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 164 vDaVIh~-a~g---~ll~AA~~aGVkriV~vSS~ 193 (209)
||.||.+ ..+ .++..+.++|++ +|=+|+.
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~~G~~-vIDlSa~ 112 (359)
T 4dpk_A 80 VDIIFSPLPQGAAGPVEEQFAKEGFP-VISNSPD 112 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHHTTCE-EEECSST
T ss_pred CCEEEECCChHHHHHHHHHHHHCCCE-EEEcCCC
Confidence 9999988 222 266667788975 6666664
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0033 Score=56.76 Aligned_cols=87 Identities=16% Similarity=0.107 Sum_probs=52.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCc---chhhhcC-----------CceEEEEccCCCHHHHHHhhcC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR---NAMESFG-----------TYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~---~a~~~~~-----------~~vevv~GDl~D~~sL~~AL~G 163 (209)
+.+|.|.||||++|+.+++.|.+.- .+++.+..+.+ +....++ ....+.. .+++ .+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~---~~~~----~~~~ 79 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKP---TDPK----LMDD 79 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEE---CCGG----GCTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEe---CCHH----HhcC
Confidence 3579999999999999999665532 46777764332 1111111 0111111 1222 3579
Q ss_pred CcEEEEc-Chh---HHHHHHHhCCCCEEEEeccc
Q 028418 164 VRSIICP-SEG---FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 164 vDaVIh~-a~g---~ll~AA~~aGVkriV~vSS~ 193 (209)
||.||.+ ..+ .++..+.++|++ +|=+|+.
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~~G~~-vIDlSa~ 112 (359)
T 4dpl_A 80 VDIIFSPLPQGAAGPVEEQFAKEGFP-VISNSPD 112 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHHTTCE-EEECSST
T ss_pred CCEEEECCChHHHHHHHHHHHHCCCE-EEEcCCC
Confidence 9999988 222 266667788975 6666664
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0046 Score=55.43 Aligned_cols=64 Identities=6% Similarity=-0.089 Sum_probs=47.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCC---cEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV---RSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~Gv---DaVIh~ 170 (209)
+++|.|.| .|.+|+.+++.|++.|++|.+..|++++.......++.+ ..++ .++++.+ |.||.+
T Consensus 22 ~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~---~e~~~~a~~~DvVi~~ 88 (358)
T 4e21_A 22 SMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG----ARSI---EEFCAKLVKPRVVWLM 88 (358)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC----CSSH---HHHHHHSCSSCEEEEC
T ss_pred CCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE----eCCH---HHHHhcCCCCCEEEEe
Confidence 46899998 799999999999999999999999987765443333321 2333 4444445 888877
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0052 Score=54.71 Aligned_cols=65 Identities=14% Similarity=0.111 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhh----h------cCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME----S------FGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~----~------~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
+.++|.|+|| |.+|+.++..|+..|+ +|++++++++++.. + .+..+.+..+| .++++++|
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aD 75 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDAD 75 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCC
Confidence 4679999996 9999999999999887 89999987765431 1 11234554444 35899999
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.||++
T Consensus 76 vVvi~ 80 (326)
T 3pqe_A 76 IVCIC 80 (326)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99998
|
| >2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.014 Score=51.47 Aligned_cols=83 Identities=10% Similarity=0.041 Sum_probs=56.4
Q ss_pred CeEEEE-cCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC--h-
Q 028418 100 DAVLVT-DGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS--E- 172 (209)
Q Consensus 100 ~~ILVT-GATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a--~- 172 (209)
++++|. |+||..|+.+++.|++.|+++...+ +|.+. .... ++.++ .++.++.+ .+|.++.+. .
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~V-nP~~~g~~i~--G~~vy-------~sl~el~~~~~vD~avI~vP~~~ 83 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEYGTNLVGGT-TPGKGGKTHL--GLPVF-------NTVKEAKEQTGATASVIYVPPPF 83 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCTTCEET--TEEEE-------SSHHHHHHHHCCCEEEECCCHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHCCCcEEEEe-CCCcCcceEC--Ceeee-------chHHHhhhcCCCCEEEEecCHHH
Confidence 455555 9999999999999999999966555 44432 1222 23333 13555555 899998872 1
Q ss_pred -hHHHHHHHhCCCCEEEEecc
Q 028418 173 -GFISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 173 -g~ll~AA~~aGVkriV~vSS 192 (209)
.-+++.|.+.|++.+|.++.
T Consensus 84 ~~~~~~e~i~~Gi~~iv~~t~ 104 (305)
T 2fp4_A 84 AAAAINEAIDAEVPLVVCITE 104 (305)
T ss_dssp HHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHHCCCCEEEEECC
Confidence 12677788899999777665
|
| >3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.031 Score=48.48 Aligned_cols=68 Identities=10% Similarity=-0.002 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchh--hhcCCceEEEEccCCCHHHHHHh-------hcCCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAM--ESFGTYVESMAGDASNKKFLKTA-------LRGVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~--~~~~~~vevv~GDl~D~~sL~~A-------L~GvDaV 167 (209)
++.+|.|.|+.|++|+..++.|...+.++++++ |+++++. ..+ +.+.+ ++|.+.+.+. -..+|+|
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~-~~~~~----~~~~~~ll~~~~~l~~~~~~vD~V 76 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFF-PEAEF----FTEPEAFEAYLEDLRDRGEGVDYL 76 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTC-TTCEE----ESCHHHHHHHHHHHHHTTCCCSEE
T ss_pred CceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhC-CCCce----eCCHHHHHHHhhhhcccCCCCcEE
Confidence 467999999999999999999998888888887 4444421 111 22333 3555555543 2679999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
+.+
T Consensus 77 ~I~ 79 (312)
T 3o9z_A 77 SIA 79 (312)
T ss_dssp EEC
T ss_pred EEC
Confidence 987
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.02 Score=48.58 Aligned_cols=98 Identities=13% Similarity=0.055 Sum_probs=63.8
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCC-------------------cchhh------hcCCce--EEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAME------SFGTYV--ESM 147 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~-------------------~~a~~------~~~~~v--evv 147 (209)
...+.+|+|.|+.| +|+.++..|...|. ++.+++++. .++.. ...+++ +.+
T Consensus 25 ~l~~~~VlvvG~Gg-lG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 25 KLLDSQVLIIGLGG-LGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHTCEEEEECCST-THHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhcCcEEEEccCH-HHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 34567999999855 99999999999997 566665432 11110 112333 444
Q ss_pred EccCCCHHHHHHhhcCCcEEEEcCh-----hHHHHHHHhCCCCEEEEecccccc
Q 028418 148 AGDASNKKFLKTALRGVRSIICPSE-----GFISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 148 ~GDl~D~~sL~~AL~GvDaVIh~a~-----g~ll~AA~~aGVkriV~vSS~~Vy 196 (209)
..++ +.+.+.+.++++|.||.+.. ..+.++|.+.++. +|+.+..+.+
T Consensus 104 ~~~~-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p-~i~~~~~g~~ 155 (251)
T 1zud_1 104 QQRL-TGEALKDAVARADVVLDCTDNMATRQEINAACVALNTP-LITASAVGFG 155 (251)
T ss_dssp CSCC-CHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCC-EEEEEEEBTE
T ss_pred eccC-CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCC-EEEEeccccc
Confidence 4444 44667888999999998731 1266778888865 6666654433
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0039 Score=53.36 Aligned_cols=39 Identities=10% Similarity=0.032 Sum_probs=34.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
++++|.|.|+ |.+|..++..|..+|++|++..|++++..
T Consensus 14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~ 52 (302)
T 1f0y_A 14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA 52 (302)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 4678999998 99999999999999999999999876543
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0015 Score=56.73 Aligned_cols=90 Identities=13% Similarity=0.172 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeCCcchhh--hcCCceEEEEccCCC-HHHHHHhhc--CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAME--SFGTYVESMAGDASN-KKFLKTALR--GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D-~~sL~~AL~--GvDaVIh~ 170 (209)
+.++|||+|| |.||...++.+... |.+|.++++++++... .++ ++.+ .|..+ .+.+.+... ++|.||.+
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~~~~~~g~g~D~vid~ 245 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELG--ADYV-SEMKDAESLINKLTDGLGASIAIDL 245 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHT--CSEE-ECHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhC--CCEE-eccccchHHHHHhhcCCCccEEEEC
Confidence 6789999999 99999999888888 9999999987765432 233 2222 23333 443444332 79999988
Q ss_pred C-hh-H---HHHHHHhCCCCEEEEeccc
Q 028418 171 S-EG-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 171 a-~g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
. .. . .++..+.. .++|.++..
T Consensus 246 ~g~~~~~~~~~~~l~~~--G~iv~~g~~ 271 (344)
T 2h6e_A 246 VGTEETTYNLGKLLAQE--GAIILVGME 271 (344)
T ss_dssp SCCHHHHHHHHHHEEEE--EEEEECCCC
T ss_pred CCChHHHHHHHHHhhcC--CEEEEeCCC
Confidence 3 22 2 33333333 477777643
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.012 Score=51.18 Aligned_cols=93 Identities=12% Similarity=0.016 Sum_probs=59.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhh------cCCcEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTAL------RGVRSI 167 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL------~GvDaV 167 (209)
.+.++|||+|| |.+|...++.+...|.+ |.+.++++++... .+...+-.+..|-.+.+.+.+.+ +|+|.|
T Consensus 178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 46789999998 99999999988899997 8888887765431 12323322333333444444333 379999
Q ss_pred EEcC--hhH---HHHHHHhCCCCEEEEecc
Q 028418 168 ICPS--EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 168 Ih~a--~g~---ll~AA~~aGVkriV~vSS 192 (209)
|.+. ..+ .++..+.. .++|.++.
T Consensus 257 id~~g~~~~~~~~~~~l~~~--G~iv~~G~ 284 (363)
T 3m6i_A 257 LECTGVESSIAAAIWAVKFG--GKVFVIGV 284 (363)
T ss_dssp EECSCCHHHHHHHHHHSCTT--CEEEECCC
T ss_pred EECCCChHHHHHHHHHhcCC--CEEEEEcc
Confidence 9883 222 23333333 57887764
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0083 Score=52.88 Aligned_cols=93 Identities=15% Similarity=-0.001 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhhc-CCcEEEEcC-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTALR-GVRSIICPS- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL~-GvDaVIh~a- 171 (209)
.+.++|||+||+|.+|...++.+...|.+|.+.+ ++++......-+++.+ .|..+.+ .+.++.. ++|.||.+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v-i~~~~~~~~~~v~~~t~g~~d~v~d~~g 240 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEV-FDYRAPNLAQTIRTYTKNNLRYALDCIT 240 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEE-EETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEE-EECCCchHHHHHHHHccCCccEEEECCC
Confidence 5678999999999999999999999999999887 4554432211223222 2444433 3444443 589999883
Q ss_pred h-hHH---HHHHHhCCCCEEEEecc
Q 028418 172 E-GFI---SNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~-g~l---l~AA~~aGVkriV~vSS 192 (209)
. .++ +++..+. -.++|.++.
T Consensus 241 ~~~~~~~~~~~l~~~-~G~iv~~g~ 264 (371)
T 3gqv_A 241 NVESTTFCFAAIGRA-GGHYVSLNP 264 (371)
T ss_dssp SHHHHHHHHHHSCTT-CEEEEESSC
T ss_pred chHHHHHHHHHhhcC-CCEEEEEec
Confidence 2 222 2222122 257888764
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0069 Score=53.37 Aligned_cols=66 Identities=12% Similarity=-0.036 Sum_probs=49.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++|.|.|. |.||+.+++.|...|++|.+..|++++.......+++.. ++.++++.+|.|+.+
T Consensus 152 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l~~aDvVi~~ 217 (330)
T 2gcg_A 152 GLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV--------STPELAAQSDFIVVA 217 (330)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC--------CHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC--------CHHHHHhhCCEEEEe
Confidence 355779999986 999999999999999999999988764432222223321 356778899999876
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0036 Score=55.87 Aligned_cols=70 Identities=13% Similarity=0.184 Sum_probs=49.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh--hcCCceEEEEccCCCH---HHHHHhhc--CCcEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNK---KFLKTALR--GVRSII 168 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~--~~~~~vevv~GDl~D~---~sL~~AL~--GvDaVI 168 (209)
.+.++|||+|| |.||...++.+...|. +|.++++++++... .++ ++.+ .|..+. +.+.++.. |+|.||
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~~i~~~t~g~g~D~vi 287 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELG--ADHV-IDPTKENFVEAVLDYTNGLGAKLFL 287 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHT--CSEE-ECTTTSCHHHHHHHHTTTCCCSEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC--CCEE-EcCCCCCHHHHHHHHhCCCCCCEEE
Confidence 46779999998 9999999998889999 88888887765432 233 3222 244333 33444443 699999
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
-+
T Consensus 288 d~ 289 (404)
T 3ip1_A 288 EA 289 (404)
T ss_dssp EC
T ss_pred EC
Confidence 88
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0034 Score=55.43 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=57.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
.+.++|||+|| |.+|...++.+...|. +|.++++++++... .++ ++.+ .|..+.+..+...+ |+|.
T Consensus 181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG--a~~v-i~~~~~~~~~~i~~~~~~~~gg~Dv 256 (370)
T 4ej6_A 181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVG--ATAT-VDPSAGDVVEAIAGPVGLVPGGVDV 256 (370)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHT--CSEE-ECTTSSCHHHHHHSTTSSSTTCEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC--CCEE-ECCCCcCHHHHHHhhhhccCCCCCE
Confidence 46789999998 9999999998899999 78888777765432 233 2222 24444443333332 7999
Q ss_pred EEEc-Chh-H---HHHHHHhCCCCEEEEeccc
Q 028418 167 IICP-SEG-F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 167 VIh~-a~g-~---ll~AA~~aGVkriV~vSS~ 193 (209)
||.+ ..+ + .+++++.. .++|.++..
T Consensus 257 vid~~G~~~~~~~~~~~l~~~--G~vv~~G~~ 286 (370)
T 4ej6_A 257 VIECAGVAETVKQSTRLAKAG--GTVVILGVL 286 (370)
T ss_dssp EEECSCCHHHHHHHHHHEEEE--EEEEECSCC
T ss_pred EEECCCCHHHHHHHHHHhccC--CEEEEEecc
Confidence 9987 322 2 23333333 467777643
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0025 Score=55.36 Aligned_cols=67 Identities=6% Similarity=-0.111 Sum_probs=46.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCC--cchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK--RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~--~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...+++|.|.|+ |.+|..+++.|++.|+ +|.+..|++ ++.......++.+ . .++.++++++|.||.+
T Consensus 21 ~~~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~----~---~~~~e~~~~aDvVi~~ 90 (312)
T 3qsg_A 21 QSNAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC----K---ASVAEVAGECDVIFSL 90 (312)
T ss_dssp ----CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE----C---SCHHHHHHHCSEEEEC
T ss_pred cCCCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE----e---CCHHHHHhcCCEEEEe
Confidence 334678999985 9999999999999999 999999974 4433222223332 1 2345677788999887
|
| >3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.01 Score=51.68 Aligned_cols=66 Identities=14% Similarity=0.169 Sum_probs=51.7
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+|||+|+ |.+|+.+++.|.+.|++|.++..++........ -+ +..|..|.+.+.+.+.++|.|+..
T Consensus 1 ~iliiG~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~a--~~-~~~~~~d~~~l~~~~~~~d~v~~~ 66 (369)
T 3aw8_A 1 MIGILGG-GQLGRMLALAGYPLGLSFRFLDPSPEACAGQVG--EL-VVGEFLDEGALLRFAEGLALVTYE 66 (369)
T ss_dssp CEEEECC-SHHHHHHHHHHTTBTCCEEEEESCTTCGGGGTS--EE-EECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCChHHHhh--ce-EecCCCCHHHHHHHHhCCCEEEEC
Confidence 5899995 799999999999999999999865433211222 12 678999999999988999998764
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0047 Score=55.27 Aligned_cols=68 Identities=12% Similarity=0.086 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH-HHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~-~sL~~AL~GvDaVIh~ 170 (209)
..++|.|.| .|.+|..+++.|.+.|++|.+..|+++........+++. ..+. +.+.+|.+++|.||.+
T Consensus 7 ~~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlVila 75 (341)
T 3ktd_A 7 ISRPVCILG-LGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDV----SADLEATLQRAAAEDALIVLA 75 (341)
T ss_dssp CSSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEEEEC
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee----eCCHHHHHHhcccCCCEEEEe
Confidence 356899998 799999999999999999999999887654332233422 2343 3455667789999987
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0096 Score=52.65 Aligned_cols=71 Identities=13% Similarity=0.022 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCC----HHHHHHhhc--CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN----KKFLKTALR--GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D----~~sL~~AL~--GvDaVIh 169 (209)
.+.++|||+|+ |-||...++.+...|. +|.++++++++......-+++++ |..+ .+.+.+... |+|.||.
T Consensus 184 ~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i--~~~~~~~~~~~v~~~t~g~g~Dvvid 260 (398)
T 1kol_A 184 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIAALLGEPEVDCAVD 260 (398)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEE--ETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEE--ccCCcchHHHHHHHHhCCCCCCEEEE
Confidence 46789999995 9999999988888998 68888887766443222234533 4433 334555543 7999998
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 261 ~ 261 (398)
T 1kol_A 261 A 261 (398)
T ss_dssp C
T ss_pred C
Confidence 8
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 209 | |||
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.89 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.8 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.8 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.79 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.77 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.77 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.75 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.74 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.74 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.73 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.72 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.7 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.7 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.7 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.7 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.7 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.69 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.68 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.67 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.67 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.66 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.66 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.65 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.65 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.64 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.61 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.53 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.5 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.41 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.17 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.15 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.14 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.14 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.13 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.13 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.13 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.12 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.1 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.09 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.09 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.08 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.08 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.08 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.08 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.07 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.07 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.05 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.04 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.04 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.04 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.04 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.02 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.01 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 99.01 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.01 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.99 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.98 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.98 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.97 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.96 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.94 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.91 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.91 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.9 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.9 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.86 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.85 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.82 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.82 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.81 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.79 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.78 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.77 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.72 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.7 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.7 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.69 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.69 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.68 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.63 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.6 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.6 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.52 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.51 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.5 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.48 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 98.33 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.28 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.23 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.22 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 98.13 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.08 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.06 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.06 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 98.03 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.96 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.94 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 97.94 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 97.92 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.88 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.88 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.75 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.73 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.66 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.65 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.6 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.56 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.46 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.44 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.44 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.42 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.37 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.35 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.34 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.28 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.28 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.23 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.19 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.15 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.15 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.11 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.08 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.05 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.01 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.95 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 96.93 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 96.85 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.82 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.79 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.77 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 96.75 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.75 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.73 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.72 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.61 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.56 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.54 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.5 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.37 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.35 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.31 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.3 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 96.28 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.26 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.25 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.22 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 96.21 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.18 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.17 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.15 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.13 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.09 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.05 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.0 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 95.98 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 95.98 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 95.97 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.95 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 95.92 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 95.9 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.9 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 95.89 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.8 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.8 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 95.79 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.66 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.64 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 95.55 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 95.42 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 95.36 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 95.28 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.27 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 95.12 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 95.09 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 94.95 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 94.95 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 94.93 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.91 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 94.86 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 94.83 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 94.66 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 94.61 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.36 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.34 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 94.22 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 94.06 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 93.73 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 93.55 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 93.52 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 93.48 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 93.42 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 93.39 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 93.34 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.34 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 93.24 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 93.13 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.03 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 93.01 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 92.99 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 92.91 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 92.81 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 92.81 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 92.71 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 92.43 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.28 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 92.28 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 92.27 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 92.04 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 92.0 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 91.73 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 91.53 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 91.51 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 91.49 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 91.19 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 90.99 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 90.72 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 90.69 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 90.64 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 90.57 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 90.53 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 90.41 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 89.87 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 89.8 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 89.7 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 89.62 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 89.3 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 89.12 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 89.04 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 89.04 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 88.98 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 88.8 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 88.73 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 88.53 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 88.47 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 88.38 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 88.37 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 88.06 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 87.96 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 87.96 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 87.24 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 87.06 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 86.89 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 86.76 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 86.74 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 86.47 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 86.01 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 85.95 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 85.9 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 85.65 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 85.36 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 85.2 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 85.18 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 85.02 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 84.46 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.37 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 83.74 | |
| d1sc6a2 | 132 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 83.49 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 83.01 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 83.0 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 82.97 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 82.96 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 82.84 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 82.75 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 82.32 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 82.1 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 82.02 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.78 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 81.47 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 81.11 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 81.06 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 80.92 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 80.6 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 80.3 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 80.13 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 80.09 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=9.7e-23 Score=164.91 Aligned_cols=104 Identities=15% Similarity=0.181 Sum_probs=93.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C-----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S----- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a----- 171 (209)
.+++||||||||+||++|+++|+++||+|++++|++++.......+++++.+|++|++++.++++|+|+|||+ .
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~ 81 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence 4789999999999999999999999999999999998876666678999999999999999999999999998 1
Q ss_pred -------hh--HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 -------EG--FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 -------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+ .++++|++++|+|||++||.+++.+...
T Consensus 82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~ 120 (205)
T d1hdoa_ 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK 120 (205)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC
T ss_pred hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc
Confidence 12 2899999999999999999998877654
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=1.1e-19 Score=155.77 Aligned_cols=102 Identities=20% Similarity=0.226 Sum_probs=86.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-------hhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-------~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
|+|||||||||||++|++.|+++||+|++++|-.... ......+++++++|++|.+.+.++++ ++|+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 6899999999999999999999999999998633211 12234579999999999999999998 89999998
Q ss_pred C--------------------hhH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 171 S--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+ .|+ ++++|++.+++||||+||..+|+....
T Consensus 81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~ 133 (338)
T d1udca_ 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPK 133 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCS
T ss_pred CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccc
Confidence 3 122 899999999999999999999976654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.80 E-value=2.9e-19 Score=153.49 Aligned_cols=109 Identities=14% Similarity=0.034 Sum_probs=89.7
Q ss_pred CCccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 91 ~~~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|.-|-. .+|+|||||||||||++|+++|+++||+|++++|.............++..+|+.|.+.+.++++++|+|||+
T Consensus 8 ~~~~~~-~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~ 86 (363)
T d2c5aa1 8 EQYWPS-ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNL 86 (363)
T ss_dssp CCSCTT-SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred cCcCCC-CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeec
Confidence 444533 5778999999999999999999999999999987654432222345789999999999999999999999998
Q ss_pred C---------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 171 S---------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 171 a---------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+ .++ ++++|++.+++||||+||..+|+...
T Consensus 87 a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~ 139 (363)
T d2c5aa1 87 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFK 139 (363)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGG
T ss_pred ccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccc
Confidence 2 112 78999999999999999999998654
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.79 E-value=1.5e-19 Score=155.05 Aligned_cols=101 Identities=17% Similarity=0.140 Sum_probs=85.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-------hhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-------a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~ 170 (209)
++|||||||||||+||+++|+++||+|++++|-... .......+++++.+|++|++.+.++++ ++|+|||+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 689999999999999999999999999999853321 112234678999999999999999987 88999998
Q ss_pred C--------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 171 S--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+ .++ ++++|++.+++||||+||..||+...
T Consensus 82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~ 133 (347)
T d1z45a2 82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDAT 133 (347)
T ss_dssp CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGG
T ss_pred cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcc
Confidence 2 011 78999999999999999999998654
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=6.9e-19 Score=144.75 Aligned_cols=104 Identities=15% Similarity=0.161 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (209)
.+++|||||||||||++|+++|+++|+ +|++++|++.+........+++..+|+.+.+.+.++++|+|+|||++
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~~ 92 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 92 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccccc
Confidence 346899999999999999999999994 89999998866544445678999999999999999999999999982
Q ss_pred -------------hh--HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 -------------EG--FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 -------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+ .++++|++.++++|||+|+.+++..+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~ 137 (232)
T d2bkaa1 93 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNF 137 (232)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS
T ss_pred cccchhhhhhhcccccceeeecccccCccccccCCccccccCccc
Confidence 01 1788999999999999999999987765
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=6.3e-19 Score=152.87 Aligned_cols=102 Identities=16% Similarity=0.157 Sum_probs=81.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hh------hhcCCceEEEEccCCCHHHHHHhhcCC--cE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AM------ESFGTYVESMAGDASNKKFLKTALRGV--RS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~------~~~~~~vevv~GDl~D~~sL~~AL~Gv--Da 166 (209)
+.+||||||||||++|+++|+++||+|++++|.+.. .. .....+++++++|++|.+.+.++++++ |+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 678999999999999999999999999999985431 11 122357899999999999999999976 99
Q ss_pred EEEcC--------------------hhH--HHHHHHhCCCC---EEEEecccccccCCCC
Q 028418 167 IICPS--------------------EGF--ISNAGSLKGVQ---HVILLSQRQRWHSSSN 201 (209)
Q Consensus 167 VIh~a--------------------~g~--ll~AA~~aGVk---riV~vSS~~Vyg~~~~ 201 (209)
|||++ .|+ ++++|++.+++ ||||+||..|||....
T Consensus 82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~ 141 (357)
T d1db3a_ 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQE 141 (357)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCS
T ss_pred EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCC
Confidence 99992 122 78999987765 7999999999987543
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.75 E-value=2.9e-18 Score=143.20 Aligned_cols=99 Identities=15% Similarity=0.058 Sum_probs=79.8
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC--cchh---h-hcCCceEEEEccCCCHHHHHHhhcCC--cEEEEcC-
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK--RNAM---E-SFGTYVESMAGDASNKKFLKTALRGV--RSIICPS- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~--~~a~---~-~~~~~vevv~GDl~D~~sL~~AL~Gv--DaVIh~a- 171 (209)
+|||||||||||+||+++|+++||+|++++|-. .... . ....+++++.+|++|++.+.++++++ |+|||++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 799999999999999999999999999987422 1111 1 12357899999999999999999886 9999992
Q ss_pred -------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.|+ ++++|.+.+++++|+.||.+++...
T Consensus 82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~ 130 (338)
T d1orra_ 82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGD 130 (338)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTT
T ss_pred cccccccccChHHHHHHHHHHHHHHHHhhhccccccccccccccccccc
Confidence 122 7899999999988888887665444
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.74 E-value=3.1e-18 Score=147.06 Aligned_cols=100 Identities=14% Similarity=0.197 Sum_probs=82.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
++++|||||||||||++|+++|+++||+|++++|+.++.... ......++.+|+.|++.+.+++.++|+|+|
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~ 89 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence 368999999999999999999999999999999987654321 122345688999999999999999999999
Q ss_pred cC-----------------hhH--HHHHHHhC-CCCEEEEeccccccc
Q 028418 170 PS-----------------EGF--ISNAGSLK-GVQHVILLSQRQRWH 197 (209)
Q Consensus 170 ~a-----------------~g~--ll~AA~~a-GVkriV~vSS~~Vyg 197 (209)
++ .|+ ++++|.+. ++++|||+||..++.
T Consensus 90 ~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~ 137 (342)
T d1y1pa1 90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSAL 137 (342)
T ss_dssp CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTC
T ss_pred hcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeec
Confidence 82 122 78888775 799999999987543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=9.1e-18 Score=142.29 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=80.6
Q ss_pred CeE-EEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-----h-------hhcCCceEEEEccCCCHHHHHHhhcC--C
Q 028418 100 DAV-LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----M-------ESFGTYVESMAGDASNKKFLKTALRG--V 164 (209)
Q Consensus 100 ~~I-LVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-----~-------~~~~~~vevv~GDl~D~~sL~~AL~G--v 164 (209)
++| ||||||||||+||+++|+++||+|++++|.+... . .....+++++.+|++|++.+..++.+ .
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 478 9999999999999999999999999999965421 1 11124589999999999999999964 5
Q ss_pred cEEEEc-C-------------------hhH--HHHHHHhCCCC---EEEEecccccccCCCC
Q 028418 165 RSIICP-S-------------------EGF--ISNAGSLKGVQ---HVILLSQRQRWHSSSN 201 (209)
Q Consensus 165 DaVIh~-a-------------------~g~--ll~AA~~aGVk---riV~vSS~~Vyg~~~~ 201 (209)
+.|+|+ + .|+ ++++|+++++. +|||+||..|||....
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~ 142 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQE 142 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSS
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCC
Confidence 688877 2 122 68899988774 8999999999987543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.73 E-value=1.2e-17 Score=142.92 Aligned_cols=102 Identities=13% Similarity=0.138 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCH-HHHHHhhcCCcEEEEcC--
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNK-KFLKTALRGVRSIICPS-- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~-~sL~~AL~GvDaVIh~a-- 171 (209)
.+++|||||||||||++|+++|+++||+|++++|++++... ....+++++++|++|+ +.+..++.+++++++..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~ 81 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 81 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence 57899999999999999999999999999999999876432 2235799999999885 56788999999999871
Q ss_pred ------h--hHHHHHHHhCCCCEEEEecccccccCC
Q 028418 172 ------E--GFISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 ------~--g~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
. -.+++||+++|++|+|+.||.......
T Consensus 82 ~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~ 117 (350)
T d1xgka_ 82 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY 117 (350)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGT
T ss_pred ccchhhhhhhHHHHHHHHhCCCceEEEeeccccccC
Confidence 1 128999999999999999987654433
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.72 E-value=2.4e-17 Score=135.41 Aligned_cols=102 Identities=16% Similarity=0.062 Sum_probs=86.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh--------hhcCCceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--------ESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~--------~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
.+++|||||||||||++|+++|+++||+|++++|++.... .....+++++.+|++|++.+.+++++++++|+
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~ 81 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 81 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence 4678999999999999999999999999999999875421 12346799999999999999999999999998
Q ss_pred cC---------hh--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 170 PS---------EG--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a---------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+. .+ .++++|.+++..++|+.||.+++...
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~ 122 (312)
T d1qyda_ 82 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI 122 (312)
T ss_dssp CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS
T ss_pred hhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC
Confidence 71 12 27888999999999999998776554
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.70 E-value=7.1e-17 Score=137.61 Aligned_cols=104 Identities=17% Similarity=0.170 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-------h----hhcCCceEEEEccCCCHHHHHHhhcCCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------M----ESFGTYVESMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-------~----~~~~~~vevv~GDl~D~~sL~~AL~GvDa 166 (209)
..++|||||||||||++|+++|+++||+|++++|..... . ......++++.+|+.|...+.....+.+.
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~ 94 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 94 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence 456899999999999999999999999999998733210 0 11124689999999999999999999999
Q ss_pred EEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 167 IICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 167 VIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
|+|++ .|+ ++++|+++++++|||+||..+||..+.
T Consensus 95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~ 151 (341)
T d1sb8a_ 95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPG 151 (341)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCC
T ss_pred cccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCC
Confidence 99982 122 889999999999999999999987654
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=3.2e-18 Score=145.84 Aligned_cols=96 Identities=15% Similarity=0.187 Sum_probs=73.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-----CCceEEEEccCCCHHHHHHhhcCCcEEEEcC--
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRGVRSIICPS-- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-----~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-- 171 (209)
+++|||||||||||++|+++|+++|++|++++|......... ...+++...|+ +..++.++|+|||++
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~~~~~d~VihlAa~ 75 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-----VEPLYIEVDQIYHLASP 75 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT-----TSCCCCCCSEEEECCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH-----HHHHHcCCCEEEECccc
Confidence 579999999999999999999999999999987332211111 12355555555 455678999999982
Q ss_pred ------------------hhH--HHHHHHhCCCCEEEEecccccccCCC
Q 028418 172 ------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 172 ------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.++ ++++|++.++ |+||+||..||+...
T Consensus 76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~ 123 (312)
T d2b69a1 76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPE 123 (312)
T ss_dssp CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCS
T ss_pred CCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCC
Confidence 022 7899999997 799999999998753
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.70 E-value=5e-17 Score=131.71 Aligned_cols=102 Identities=17% Similarity=0.125 Sum_probs=86.8
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---------hhcCCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---------ESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---------~~~~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
.+++|||||||||||++|+++|+++||+|++++|++.... .....+++++.+|+.+...+.+++++++.||
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 4789999999999999999999999999999999875432 1224568999999999999999999999999
Q ss_pred EcC-----hh--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 169 CPS-----EG--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 169 h~a-----~g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
|+. .+ .++++++.++++++++.|+.......
T Consensus 82 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~ 119 (307)
T d1qyca_ 82 STVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDN 119 (307)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTS
T ss_pred ecccccccchhhHHHHHHHHhccccceeeecccccccc
Confidence 982 22 38899999999999999997665544
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.70 E-value=5e-17 Score=139.10 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=83.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc-------chhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-------NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~-------~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+|+|||||||||||++|+++|+++|++|++++++.. ........+++++.+|++|++.+..++.+++.|+|+
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~ 80 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY 80 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence 3789999999999999999999999999988887531 112234567999999999999999999999999998
Q ss_pred C--------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 171 S--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+ .|+ ++++|+..+ .++|++||..+|+..
T Consensus 81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~ 130 (346)
T d1oc2a_ 81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDL 130 (346)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCB
T ss_pred hhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEeccc
Confidence 2 122 788888888 478999999999754
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=3.5e-17 Score=139.50 Aligned_cols=102 Identities=20% Similarity=0.206 Sum_probs=83.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc------h-------hhhcCCceEEEEccCCCHHHHHHhhcCCc-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------A-------MESFGTYVESMAGDASNKKFLKTALRGVR- 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~------a-------~~~~~~~vevv~GDl~D~~sL~~AL~GvD- 165 (209)
++|||||||||||++|+++|+++||+|++++|-... . ......+++++++|++|.+.+.+++.+.+
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 82 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence 589999999999999999999999999999752111 0 11234678999999999999999998765
Q ss_pred -EEEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 166 -SIICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 166 -aVIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.++|++ .++ ++++|++.+|++|||+||..+|+....
T Consensus 83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~ 141 (346)
T d1ek6a_ 83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQY 141 (346)
T ss_dssp EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSS
T ss_pred ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeecccc
Confidence 677872 122 789999999999999999999987654
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.69 E-value=4.2e-17 Score=141.98 Aligned_cols=101 Identities=11% Similarity=0.060 Sum_probs=81.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh------hh-cCCceEEEEccCCCHHHHHHhhcC--CcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ES-FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~------~~-~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~ 170 (209)
|+|||||||||||++|+++|+++||+|++.+++..... .. ...+++++.+|++|+..+.+++++ +|+|||+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 68999999999999999999999999888776543221 11 125799999999999999999974 7999999
Q ss_pred C--------------------hhH--HHHHHHhCC---------CCEEEEecccccccCCC
Q 028418 171 S--------------------EGF--ISNAGSLKG---------VQHVILLSQRQRWHSSS 200 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~aG---------VkriV~vSS~~Vyg~~~ 200 (209)
+ .|+ ++++|++.+ ++||||+||..|||...
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~ 141 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLP 141 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCC
T ss_pred ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCc
Confidence 3 112 678887764 56999999999998664
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.68 E-value=1.2e-16 Score=124.79 Aligned_cols=101 Identities=21% Similarity=0.358 Sum_probs=85.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCc--EEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~--VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (209)
.++||||||||||||++|+++|+++||+ |++++|++++... ...+++++.+|++|++.+.++++++|+|||++
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~ 80 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-IGGEADVFIGDITDADSINPAFQGIDALVILTSAVP 80 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-TTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-ccCCcEEEEeeeccccccccccccceeeEEEEeecc
Confidence 5889999999999999999999999976 6667788876543 34578999999999999999999999999982
Q ss_pred -----------------------------hhH--HHHHHHhCCCCEEEEecccccccCC
Q 028418 172 -----------------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 -----------------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.++ ++..+...++++..+.|+..++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 139 (252)
T d2q46a1 81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD 139 (252)
T ss_dssp EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT
T ss_pred ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCC
Confidence 011 5677888999999999998877554
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=1.5e-16 Score=134.94 Aligned_cols=101 Identities=14% Similarity=0.023 Sum_probs=80.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHH-HhhcCCcEEEEcC-----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES-FGTYVESMAGDASNKKFLK-TALRGVRSIICPS----- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~-~AL~GvDaVIh~a----- 171 (209)
|+|||||||||||++|+++|+++|+ +|+++++........ ..++++++++|++|.+.+. .+++++|+|||++
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~ 80 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence 6899999999999999999999994 899998765443322 2467999999998876655 4888999999982
Q ss_pred ---------------hhH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 ---------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 ---------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.|+ ++++|.+.+++. +|.||..+|+....
T Consensus 81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~-~~~ss~~~~~~~~~ 126 (342)
T d2blla1 81 IEYTRNPLRVFELDFEENLRIIRYCVKYRKRI-IFPSTSEVYGMCSD 126 (342)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEE-EEECCGGGGBTCCC
T ss_pred cccccCCccccccccccccccccccccccccc-cccccccccccccc
Confidence 122 788999988754 68899998887644
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.67 E-value=8e-17 Score=139.77 Aligned_cols=101 Identities=20% Similarity=0.237 Sum_probs=78.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE---e----------CC---cch-------hhhcCCceEEEEccCCCHH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV---K----------DK---RNA-------MESFGTYVESMAGDASNKK 155 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv---R----------~~---~~a-------~~~~~~~vevv~GDl~D~~ 155 (209)
+|+|||||||||||++|+++|+++||+|++++ | +. ... ....+.+++++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 47999999999999999999999999999985 1 00 000 0122457899999999999
Q ss_pred HHHHhhcCC--cEEEEcC-----------------------hhH--HHHHHHhCCCC-EEEEecccccccCC
Q 028418 156 FLKTALRGV--RSIICPS-----------------------EGF--ISNAGSLKGVQ-HVILLSQRQRWHSS 199 (209)
Q Consensus 156 sL~~AL~Gv--DaVIh~a-----------------------~g~--ll~AA~~aGVk-riV~vSS~~Vyg~~ 199 (209)
.+.++++++ |+|||++ .|+ ++++|++.+++ ++|+.||..+|+..
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~ 152 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTP 152 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCC
T ss_pred HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccc
Confidence 999999865 9999983 012 78889887776 56777777777654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=1.3e-16 Score=133.60 Aligned_cols=89 Identities=9% Similarity=0.100 Sum_probs=74.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC-----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS----- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a----- 171 (209)
+++|||||||||||++|+++|+++|+.|+++.+.. ..|+.|++.+.+.+++ +|.|||++
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~ 67 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG 67 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------hccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence 57999999999999999999999999998765322 1479999999998864 79999982
Q ss_pred ----------------hhH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 ----------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 ----------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.++ ++++|++.+++||||+||.+||+....
T Consensus 68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~ 115 (315)
T d1e6ua_ 68 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAK 115 (315)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCC
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCC
Confidence 122 789999999999999999999986543
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.66 E-value=4.8e-16 Score=134.62 Aligned_cols=103 Identities=17% Similarity=0.246 Sum_probs=81.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEe---CC------cch--------------hhhcCCceEEEEccCCCH
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVK---DK------RNA--------------MESFGTYVESMAGDASNK 154 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR---~~------~~a--------------~~~~~~~vevv~GDl~D~ 154 (209)
.|+|||||||||||+||+++|++ .||+|+++++ .. +.. ......+++++.+|++|+
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 47999999999999999999996 7999999973 10 000 011124588999999999
Q ss_pred HHHHHhhc---CCcEEEEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 155 KFLKTALR---GVRSIICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 155 ~sL~~AL~---GvDaVIh~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+.+.++++ ++|+|||++ .++ ++++|++.++++++++|+..+|+....
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~ 153 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTM 153 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccc
Confidence 99999985 789999993 011 788999999999999999999876544
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.65 E-value=2.6e-16 Score=133.36 Aligned_cols=103 Identities=16% Similarity=0.132 Sum_probs=78.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhcC--CcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~ 170 (209)
.+++|||||||||||++|+++|+++||+|++++|+..+.... ....++++.+|++|++.+.+++++ .++|+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 358999999999999999999999999999999987654321 235699999999999999999985 4899998
Q ss_pred C--------------------hhH--HHHHHHhCCC-CEEEEecccccccCCC
Q 028418 171 S--------------------EGF--ISNAGSLKGV-QHVILLSQRQRWHSSS 200 (209)
Q Consensus 171 a--------------------~g~--ll~AA~~aGV-kriV~vSS~~Vyg~~~ 200 (209)
+ .++ ++++|++.+. +.+++.|+..++....
T Consensus 87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~ 139 (356)
T d1rkxa_ 87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKE 139 (356)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCC
T ss_pred hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccc
Confidence 2 011 6888877654 5555555555554433
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.65 E-value=2.7e-16 Score=133.24 Aligned_cols=102 Identities=22% Similarity=0.230 Sum_probs=82.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEe------C---Ccc--hh-hhcCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK------D---KRN--AM-ESFGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR------~---~~~--a~-~~~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
|+|||||||||||++|+++|+++||+|.+..| . ... .. ......++++.+|..+...+.......|.|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 80 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence 68999999999999999999999987654332 1 111 11 112356899999999999999999999999
Q ss_pred EEcC--------------------hhH--HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 168 ICPS--------------------EGF--ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 168 Ih~a--------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+|++ .++ ++++|.+.++++|||+||..+|+....
T Consensus 81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~ 136 (322)
T d1r6da_ 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDS 136 (322)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSS
T ss_pred EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCC
Confidence 9982 122 789999999999999999999987654
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.64 E-value=8.8e-16 Score=128.55 Aligned_cols=102 Identities=16% Similarity=0.119 Sum_probs=79.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-----hh-cCCceEEEEccCCCHHHHHHhhcC--CcEEEEcC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ES-FGTYVESMAGDASNKKFLKTALRG--VRSIICPS 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-----~~-~~~~vevv~GDl~D~~sL~~AL~G--vDaVIh~a 171 (209)
++|||||||||||++|+++|+++||+|++++|...... .. ..++++++.+|++|+..+.+++.. .+.++|++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 58999999999999999999999999999998764321 11 235689999999999999998875 45666662
Q ss_pred --------------------hhH--HHHHHHhCCCC-EEEEecccccccCCCC
Q 028418 172 --------------------EGF--ISNAGSLKGVQ-HVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 --------------------~g~--ll~AA~~aGVk-riV~vSS~~Vyg~~~~ 201 (209)
.|+ ++++|++.+++ +||+.||..+|+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~ 133 (321)
T d1rpna_ 81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQA 133 (321)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSS
T ss_pred ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccC
Confidence 122 78899888865 7777788888766544
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.61 E-value=8.3e-16 Score=129.34 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=77.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-----hh-------hhcCCceEEEEccCCCHHHHHHhhc--CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AM-------ESFGTYVESMAGDASNKKFLKTALR--GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-----a~-------~~~~~~vevv~GDl~D~~sL~~AL~--Gv 164 (209)
++++||||||||||+||+++|+++||+|++++|.... .. ......++++.+|+++.+.+.++++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 4789999999999999999999999999999995431 11 1112457899999999999999986 56
Q ss_pred cEEEEcC--------------------hhH--HHHHHHh-----CCCCEEEEecccccccCCC
Q 028418 165 RSIICPS--------------------EGF--ISNAGSL-----KGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a--------------------~g~--ll~AA~~-----aGVkriV~vSS~~Vyg~~~ 200 (209)
|+|||++ .++ ++++++. ....++++.||..+++...
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~ 143 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP 143 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC
Confidence 9999983 011 5566654 3455788888887776654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.53 E-value=2.5e-14 Score=114.44 Aligned_cols=95 Identities=14% Similarity=0.150 Sum_probs=70.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-cCCcEEEEc-C----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICP-S---- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-~GvDaVIh~-a---- 171 (209)
++|||||||||||++|+++|+++|+ +|.+++|++.... +.+ ..+..|...+.+.+ .++|+|||+ +
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~----~~~---~~~~~d~~~~~~~~~~~~d~vi~~~g~~~~ 75 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH----PRL---DNPVGPLAELLPQLDGSIDTAFCCLGTTIK 75 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC----TTE---ECCBSCHHHHGGGCCSCCSEEEECCCCCHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc----ccc---cccccchhhhhhccccchheeeeeeeeecc
Confidence 6999999999999999999999998 5666666553321 223 33444555555444 468999998 1
Q ss_pred -------------hh--HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 -------------EG--FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 -------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+ .++++|++.+++|+||+|+.+++.....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~ 120 (212)
T d2a35a1 76 EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSI 120 (212)
T ss_dssp HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSS
T ss_pred ccccccccccchhhhhhhccccccccccccccccccccccccccc
Confidence 01 1789999999999999999999876654
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.50 E-value=8.8e-15 Score=119.37 Aligned_cols=89 Identities=21% Similarity=0.246 Sum_probs=68.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCC--cEEEEcC------
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPS------ 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~Gv--DaVIh~a------ 171 (209)
|+|||||||||||++|+++|.++|+.| ++.++... +.+|++|++.+.++++++ |+|||++
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~-----------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~ 68 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE-----------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS-----------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc-----------ccCcCCCHHHHHHHHHHcCCCEEEEeccccccc
Confidence 689999999999999999999988755 44433221 347999999999999865 9999983
Q ss_pred --------------hh--HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 --------------EG--FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 --------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+ .++++|++.++ +++++||..+|+....
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~ 113 (298)
T d1n2sa_ 69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGD 113 (298)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTT
T ss_pred ccccCccccccccccccccchhhhhcccc-ccccccccccccCCCC
Confidence 01 16788888875 6888888888765543
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.41 E-value=1.7e-13 Score=111.53 Aligned_cols=86 Identities=13% Similarity=0.149 Sum_probs=68.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC---h--
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---E-- 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a---~-- 172 (209)
|+|||||||||||++|+++|+++||+|+++.|+. .|+.|++.+.++++ ..|.|||++ .
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~ 66 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTAVD 66 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeeccccccc
Confidence 6899999999999999999999999999998753 48999999999998 459999992 0
Q ss_pred ---------------h--HHHHHHHhCCCCEEEEecccccccCCCC
Q 028418 173 ---------------G--FISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 173 ---------------g--~ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
. .+.+++ .....++++.||..+|+....
T Consensus 67 ~~~~~~~~~~~~n~~~~~~~~~~~-~~~~~~~~~~ss~~v~~~~~~ 111 (281)
T d1vl0a_ 67 KCEEQYDLAYKINAIGPKNLAAAA-YSVGAEIVQISTDYVFDGEAK 111 (281)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHH-HHHTCEEEEEEEGGGSCSCCS
T ss_pred cccccchhhccccccccccccccc-ccccccccccccceeeecccc
Confidence 0 023334 344577888888888876643
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.17 E-value=2.1e-11 Score=99.11 Aligned_cols=99 Identities=14% Similarity=0.063 Sum_probs=58.9
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc--chhhhcCCc-eEEE-EccCCCHHHHHHhhcCCcEEEEcC----
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR--NAMESFGTY-VESM-AGDASNKKFLKTALRGVRSIICPS---- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~--~a~~~~~~~-vevv-~GDl~D~~sL~~AL~GvDaVIh~a---- 171 (209)
+|||||||||||++|+++|+++|+ +|+++.+-.. +........ ..+. ..|+.+.......+..+++|+|++
T Consensus 1 ~ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~~ 80 (307)
T d1eq2a_ 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSS 80 (307)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCC
T ss_pred CEEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhccccc
Confidence 599999999999999999999995 6888753221 111111111 1111 122222222223446789999982
Q ss_pred --------------hh--HHHHHHHhCCCCEEEEecccccccCC
Q 028418 172 --------------EG--FISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 172 --------------~g--~ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+ .++++++..+++.+++.|+...++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~ 124 (307)
T d1eq2a_ 81 TTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRT 124 (307)
T ss_dssp TTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc
Confidence 01 16788899999755555544444443
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.15 E-value=1.5e-10 Score=97.46 Aligned_cols=104 Identities=12% Similarity=0.122 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||++.||+.++++|+++|++|.+..|+.++.. ..++..+.++++|++|++.++++++ .+|.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 82 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence 56789999999999999999999999999999999887653 2344568899999999999988763 6899
Q ss_pred EEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|+++ .+. ++..+++.+-.+||++||.......+
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~ 146 (254)
T d1hdca_ 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA 146 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred EEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccccc
Confidence 99982 011 34445667778999999987765443
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.14 E-value=1.6e-10 Score=96.67 Aligned_cols=104 Identities=12% Similarity=0.049 Sum_probs=80.9
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh~ 170 (209)
..+++|||||++.||+.++++|+++|++|.+..|+++..+.....+..+++.|++|+++++++++ .+|.+|+.
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn 83 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNN 83 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEe
Confidence 56899999999999999999999999999999998865432222246788999999998887764 68999997
Q ss_pred C------------------------hhH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 171 S------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 171 a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+ .+. ++..+++.+-.+||++||...+...++
T Consensus 84 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~ 144 (248)
T d2d1ya1 84 AAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE 144 (248)
T ss_dssp CCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT
T ss_pred CcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccc
Confidence 2 011 344566777789999999887655443
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.14 E-value=1.7e-10 Score=96.56 Aligned_cols=103 Identities=12% Similarity=0.167 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
..+++|||||++.||+.++++|+++|++|.+..|++++.+ ..++..+.++.+|++|+++++++++ .+|.+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil 84 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 84 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence 4689999999999999999999999999999999887654 2334568899999999999887763 68999
Q ss_pred EEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 168 ICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 168 Ih~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|+++ .+. ++..+++.+-.+||++||.......+
T Consensus 85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~ 147 (244)
T d1nffa_ 85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV 147 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT
T ss_pred EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc
Confidence 9982 011 23445666678999999987765443
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.13 E-value=2.4e-10 Score=95.58 Aligned_cols=103 Identities=16% Similarity=0.225 Sum_probs=82.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
+..++++|||||++.||+.++++|.++|++|.+..|++++... ..+..+..+.+|++|++.+.++++
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g 83 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG 83 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 4567899999999999999999999999999999999876431 234568899999999999888763
Q ss_pred CCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccC
Q 028418 163 GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+|.+|+++ .+. ++..+++.+-.+||++||......
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~ 149 (244)
T d1yb1a_ 84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS 149 (244)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC
T ss_pred CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC
Confidence 689999982 011 455567888899999999876543
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.13 E-value=1.8e-10 Score=96.19 Aligned_cols=104 Identities=18% Similarity=0.231 Sum_probs=82.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
....+.+|||||++.||+.++++|.++|++|.+..|+.+++.. ..+..+..+.+|++|++.+.++++
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 86 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 86 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4457899999999999999999999999999999998865432 234568899999999999887764
Q ss_pred CCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 163 GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 163 GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
.+|.+|+.+ .+. ++..+++.+-.+||++||.......
T Consensus 87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~ 153 (251)
T d2c07a1 87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN 153 (251)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC
T ss_pred CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC
Confidence 789999872 011 3444566777899999998765443
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.13 E-value=8.8e-11 Score=97.85 Aligned_cols=104 Identities=13% Similarity=0.168 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||++.||+.++++|+++|++|.+..|+++++. +.++..+..+.+|++|+++++++++ .+|.
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI 81 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence 45789999999999999999999999999999999887654 2335567889999999998887764 6899
Q ss_pred EEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|+.+ .+. ++..+++.+-.+||++||.......+
T Consensus 82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~ 145 (243)
T d1q7ba_ 82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG 145 (243)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC
Confidence 99882 011 34445666778999999987654443
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.12 E-value=4.8e-10 Score=93.36 Aligned_cols=104 Identities=14% Similarity=0.145 Sum_probs=82.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh----hhcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~----~~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
...+++|||||++.||+.+++.|.++|++|.+..|++.+.. +..+..+..+++|++|+++++++++ .+|
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD 82 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 82 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 45789999999999999999999999999999999875421 2345678899999999999988763 789
Q ss_pred EEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|+.+ + +. ++..+++.+-.+||++||.......+
T Consensus 83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~ 147 (247)
T d2ew8a1 83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE 147 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS
T ss_pred EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCc
Confidence 999982 0 11 34556777788999999987765444
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.10 E-value=4.7e-10 Score=93.73 Aligned_cols=100 Identities=16% Similarity=0.133 Sum_probs=79.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...+++|||||++.||+.++++|+++|++|.+..|+.++.. ...+..+..+.+|++|++.++++++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 82 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999999999999999886542 2235568889999999998888763
Q ss_pred CCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccc
Q 028418 163 GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 163 GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.+|.+|+++ .+. ++..+++.+-.+||++||....
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~ 146 (251)
T d1vl8a_ 83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVE 146 (251)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhc
Confidence 689999982 011 3455667787899999987653
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=5.9e-10 Score=93.30 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=81.0
Q ss_pred ccccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhc--
Q 028418 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR-- 162 (209)
Q Consensus 93 ~~~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~-- 162 (209)
+|+....+++|||||++.||+++++.|.++|++|.+..|++++..+. .+..+..+++|++|++++.++++
T Consensus 4 ~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~ 83 (257)
T d1xg5a_ 4 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI 83 (257)
T ss_dssp TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999988654321 12357889999999998887653
Q ss_pred -----CCcEEEEcC------------------------hhH------HHHHHHhCC--CCEEEEecccccccC
Q 028418 163 -----GVRSIICPS------------------------EGF------ISNAGSLKG--VQHVILLSQRQRWHS 198 (209)
Q Consensus 163 -----GvDaVIh~a------------------------~g~------ll~AA~~aG--VkriV~vSS~~Vyg~ 198 (209)
++|.+||++ .+. ++...++.+ -.+||++||.+.+..
T Consensus 84 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~ 156 (257)
T d1xg5a_ 84 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV 156 (257)
T ss_dssp HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred HHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC
Confidence 689999982 011 233334443 479999999876543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.09 E-value=3.4e-10 Score=93.27 Aligned_cols=101 Identities=16% Similarity=0.220 Sum_probs=76.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcc---hh------hhcCCceEEEEccCCCHHHHHHhhc-----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN---AM------ESFGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~---a~------~~~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
|..+||||||+|.||+.++++|+++|++ |..+.|+... +. ...+..+.++.+|++|++.+.++++
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 4569999999999999999999999996 6666676422 11 1234568999999999999998875
Q ss_pred -CCcEEEEcC------------------------hhH--HHHHHHhCCCCEEEEecccccccC
Q 028418 163 -GVRSIICPS------------------------EGF--ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 -GvDaVIh~a------------------------~g~--ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+|.|||++ .+. +.+++...+..+||++||+.....
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g 150 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFG 150 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTC
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccC
Confidence 367889882 011 455667778899999999765433
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.08 E-value=5e-10 Score=92.97 Aligned_cols=98 Identities=15% Similarity=0.192 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
...+++|||||++.||+.++++|+++|++|.+..|+.+... .+..+++|++|+++++++++ .+|.+|+
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVn 79 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS 79 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-----CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEe
Confidence 45789999999999999999999999999999999887643 35678999999999887763 6899998
Q ss_pred cC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 170 PS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ + +. ++...++.+-.+||++||.......
T Consensus 80 nAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~ 139 (237)
T d1uzma1 80 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI 139 (237)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----
T ss_pred eecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC
Confidence 72 0 11 3455677888899999998776443
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.08 E-value=4.4e-10 Score=93.78 Aligned_cols=104 Identities=12% Similarity=0.168 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
...+++|||||++.||+.++++|.++|++|.+..|+++..... .+..+.++.+|++|++++.++++ ++
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence 3568999999999999999999999999999999988654321 23568999999999998887764 68
Q ss_pred cEEEEcC------------------------hhH------HHHHHHhCCCC-EEEEecccccccCCC
Q 028418 165 RSIICPS------------------------EGF------ISNAGSLKGVQ-HVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a------------------------~g~------ll~AA~~aGVk-riV~vSS~~Vyg~~~ 200 (209)
|.+|+++ .++ ++..+++.+-. +||++||.......+
T Consensus 84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~ 150 (251)
T d1zk4a1 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP 150 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT
T ss_pred eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC
Confidence 9999982 011 23445666665 899999987654443
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.08 E-value=5.3e-10 Score=92.96 Aligned_cols=105 Identities=15% Similarity=0.113 Sum_probs=80.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--cCCceEEEEccCCCHHHHHHhhc---CCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR---GVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~a 171 (209)
...+++|||||++.||+.++++|.++|++|.+..|+.++..+. ...+++.+..|++|++.++++++ .+|.+|+++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnA 82 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 82 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECC
Confidence 4678999999999999999999999999999999988765422 12468899999999999999986 579999982
Q ss_pred -------------h-----------hH--HHH----HH-HhCCCCEEEEecccccccCCCC
Q 028418 172 -------------E-----------GF--ISN----AG-SLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 -------------~-----------g~--ll~----AA-~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+ +. +.+ .. ++.+-.+||++||.......++
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~ 143 (242)
T d1cyda_ 83 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN 143 (242)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT
T ss_pred ccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc
Confidence 0 11 222 22 2345579999999877655543
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.08 E-value=4.2e-10 Score=94.02 Aligned_cols=104 Identities=12% Similarity=0.146 Sum_probs=80.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
.++++|||||++.||+.++++|+++|++|.+..|+.++.. ..++..+..+.+|++|++++.++++ .+|.+
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil 83 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL 83 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 4679999999999999999999999999999999886654 3346678899999999999988764 68999
Q ss_pred EEcC------------------------hhH--HHH----H-HHhCCCCEEEEecccccccCCCC
Q 028418 168 ICPS------------------------EGF--ISN----A-GSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 168 Ih~a------------------------~g~--ll~----A-A~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
|+.+ .+. +.+ . .++..-.+||++||.......++
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~ 148 (256)
T d1k2wa_ 84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL 148 (256)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT
T ss_pred EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc
Confidence 9982 011 222 2 23344579999999877654443
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=6.2e-10 Score=92.52 Aligned_cols=106 Identities=17% Similarity=0.132 Sum_probs=82.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--cCCceEEEEccCCCHHHHHHhhc---CCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--~~~~vevv~GDl~D~~sL~~AL~---GvDaVIh~ 170 (209)
...++++|||||++.||+.++++|+++|++|.+..|+.++..+. ...+++.+..|++|++.++++++ .+|.+|+.
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn 83 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence 35678999999999999999999999999999999988765422 12468899999999999998885 67999987
Q ss_pred C-------------h-----------hH------HHHH-HHhCCCCEEEEecccccccCCCC
Q 028418 171 S-------------E-----------GF------ISNA-GSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 171 a-------------~-----------g~------ll~A-A~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+ + +. ++.. .++.+-.+||++||.......++
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~ 145 (244)
T d1pr9a_ 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN 145 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT
T ss_pred cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc
Confidence 2 0 11 2332 23456689999999877655443
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.07 E-value=4.6e-10 Score=93.98 Aligned_cols=104 Identities=15% Similarity=0.161 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
..+++|||||++.||+.++++|.++|++|.+..|++++... ..+..+..+.+|++|+++++++++ .+
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999998865431 234568899999999998887763 68
Q ss_pred cEEEEcC-------------------------hhH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 165 RSIICPS-------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 165 DaVIh~a-------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
|.+|+.+ .+. ++..+++.+-.+||++||.......++
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~ 151 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN 151 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc
Confidence 9999872 011 234455667789999999876655443
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.05 E-value=9.1e-10 Score=92.24 Aligned_cols=104 Identities=15% Similarity=0.128 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc--------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------- 162 (209)
...+++|||||++.||+.++++|+++|++|.+..|+.++..+ ..+..+.++++|++|++.++++++
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~ 85 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 85 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence 457899999999999999999999999999999998876532 224567889999999998887652
Q ss_pred CCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 163 GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|.+|+.+ .++ ++...++.+-.+||++||.......+
T Consensus 86 ~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~ 153 (259)
T d2ae2a_ 86 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP 153 (259)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT
T ss_pred CceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccc
Confidence 379999982 011 23445667778999999987655443
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=4.3e-10 Score=94.21 Aligned_cols=103 Identities=17% Similarity=0.091 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--cCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
...+++|||||++.||+.+++.|+++|++|.+..|+.+..... ...++.++.+|++|++.++++++ .+|.+
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil 83 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 83 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 3578999999999999999999999999999999988765422 22468899999999999888764 68999
Q ss_pred EEcC-------------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 168 ICPS-------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 168 Ih~a-------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|+.+ .+. ++..+++.+ .+||++||.......+
T Consensus 84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~ 146 (250)
T d1ydea1 84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQA 146 (250)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCT
T ss_pred EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCccccccccccccc
Confidence 9982 011 233445555 7999999987654443
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.04 E-value=5.6e-10 Score=93.13 Aligned_cols=104 Identities=14% Similarity=0.115 Sum_probs=81.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hh-------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AM-------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~-------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
..+++|||||++.||+.++++|+++|++|.+..|+... .+ ...+..+.++.+|++|+++++++++
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999997532 21 1234568899999999999988874
Q ss_pred CCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 163 GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+|.+|+.+ .+. ++..+++.+-.+||++||.......++
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~ 151 (260)
T d1x1ta1 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN 151 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCC
Confidence 689999982 011 345566777789999999877655443
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.04 E-value=9.7e-10 Score=92.41 Aligned_cols=105 Identities=11% Similarity=0.165 Sum_probs=80.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h------hhcCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~------~~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
+...+++|||||++.||+.++++|.++|++|.+..|+.+.. . ...+..+..+++|++|+++++++++
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999987532 1 1234568899999999999888764
Q ss_pred -CCcEEEEcC------------------------hhH------HHHHHHhCCC-CEEEEecccccccCCC
Q 028418 163 -GVRSIICPS------------------------EGF------ISNAGSLKGV-QHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 -GvDaVIh~a------------------------~g~------ll~AA~~aGV-kriV~vSS~~Vyg~~~ 200 (209)
.+|.+|+.+ .+. ++..+++.+- .+||++||.......+
T Consensus 84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~ 153 (261)
T d1geea_ 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP 153 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT
T ss_pred CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc
Confidence 689999982 011 3444555555 4589999987654443
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.04 E-value=6.9e-10 Score=92.94 Aligned_cols=106 Identities=10% Similarity=0.130 Sum_probs=82.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhh-------c
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTAL-------R 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL-------~ 162 (209)
....+++|||||++.||+.++++|.++|++|.+..|+.++..+ ..+..+..+++|++|++.+.+++ .
T Consensus 8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g 87 (255)
T d1fmca_ 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3567899999999999999999999999999999998865432 23456889999999999887765 3
Q ss_pred CCcEEEEcC-----------------------hhH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 163 GVRSIICPS-----------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 GvDaVIh~a-----------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+|.+|+++ .+. ++...++.+-.+||++||.......++
T Consensus 88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~ 155 (255)
T d1fmca_ 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN 155 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT
T ss_pred CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc
Confidence 689999982 011 334456667779999999877655443
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.02 E-value=9.3e-10 Score=91.44 Aligned_cols=102 Identities=17% Similarity=0.164 Sum_probs=79.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhc-------CCcEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~-------GvDaVIh 169 (209)
..+++|||||++.||+.++++|+++|++|.+..|+.++..+. ...+++.+.+|++|+++++++++ .+|.+|+
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 83 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence 468999999999999999999999999999999988765432 12357889999999999988763 6899999
Q ss_pred cC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 170 PS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 170 ~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
++ + +. ++...++.+-.+++.+||....+.+
T Consensus 84 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~ 143 (242)
T d1ulsa_ 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL 143 (242)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT
T ss_pred CCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCC
Confidence 72 0 11 3444567787888888886554433
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.01 E-value=1.4e-09 Score=91.05 Aligned_cols=105 Identities=17% Similarity=0.182 Sum_probs=81.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||++.||+.++++|+++|++|.+..|+++++.+ ..+..+.++.+|++|++.++++++ |
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g 83 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 83 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 357899999999999999999999999999999999865432 234567889999999998877652 3
Q ss_pred -CcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 164 -VRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 164 -vDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+|.+|+++ + +. ++...++.+..+||++||.......++
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~ 152 (258)
T d1ae1a_ 84 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS 152 (258)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT
T ss_pred CcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 68888862 0 11 234456778899999999887665544
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.01 E-value=6.5e-10 Score=83.92 Aligned_cols=89 Identities=19% Similarity=0.144 Sum_probs=72.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHh-hcCCcEEEEcC--h-hH
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPS--E-GF 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~A-L~GvDaVIh~a--~-g~ 174 (209)
|+|+|.|+ |.+|+++++.|.++|++|+++.++++....... .++.++.||.+|++.|.++ ++.+|+++.+. + .+
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~~N 79 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 79 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHHHH
Confidence 68999998 999999999999999999999999987653321 2578999999999999999 68999999872 2 22
Q ss_pred --HHHHHHhCCCCEEEE
Q 028418 175 --ISNAGSLKGVQHVIL 189 (209)
Q Consensus 175 --ll~AA~~aGVkriV~ 189 (209)
+...++..+++++|-
T Consensus 80 ~~~~~~~k~~~~~~iI~ 96 (132)
T d1lssa_ 80 LMSSLLAKSYGINKTIA 96 (132)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCceEEE
Confidence 344567888888774
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.01 E-value=7.6e-10 Score=92.57 Aligned_cols=103 Identities=16% Similarity=0.171 Sum_probs=80.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
...+++|||||++.||+.++++|+++|++|.+..|++++.. ..++....++.+|++|++.++++++ .+|.
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 83 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence 45689999999999999999999999999999999886543 3345668889999999998887764 6799
Q ss_pred EEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 167 IICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 167 VIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+|+++ .+. ++..+++.+ .+||++||.......+
T Consensus 84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~ 146 (253)
T d1hxha_ 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE 146 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT
T ss_pred EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCcc
Confidence 99982 011 334455556 8999999987765443
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.00 E-value=1.5e-09 Score=90.92 Aligned_cols=104 Identities=7% Similarity=0.101 Sum_probs=80.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---c--CCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~--~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
...+++|||||++.||+.++++|+++|++|.+..|+.++.++. + ...+.++.+|++|+++++++++ .+
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 83 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 4578999999999999999999999999999999988654321 1 2347889999999999988874 68
Q ss_pred cEEEEcC---------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 165 RSIICPS---------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 165 DaVIh~a---------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
|.+|+++ + +. ++..+++.+-.++|++||...+....
T Consensus 84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~ 151 (268)
T d2bgka1 84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE 151 (268)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT
T ss_pred ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc
Confidence 9999872 0 11 34455677888999999977654433
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.00 E-value=2.1e-09 Score=90.02 Aligned_cols=103 Identities=13% Similarity=0.165 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--------hcCCceEEEEccCCCHHHHHHhh-------c
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--------SFGTYVESMAGDASNKKFLKTAL-------R 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--------~~~~~vevv~GDl~D~~sL~~AL-------~ 162 (209)
..+++|||||++.||+.+++.|+++|++|.+..|+.++... ..+..+..+++|++|++++++++ .
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 46799999999999999999999999999999998865421 11345788999999999988776 3
Q ss_pred CCcEEEEcC-------------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 163 GVRSIICPS-------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a-------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|.+|+.+ .+. ++..+++.+-.+||++||.......+
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~ 151 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG 151 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC
Confidence 689999872 011 23445666778999999987654433
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.00 E-value=1e-09 Score=92.03 Aligned_cols=103 Identities=20% Similarity=0.189 Sum_probs=75.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
...+++|||||++.||+.++++|+++|++|.+..|+.++..+ ..+..+..+.+|++|++.+.++++ |
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 85 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 85 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence 357899999999999999999999999999999998866432 123468899999999998877652 4
Q ss_pred -CcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 164 -VRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 164 -vDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
+|.+|+++ .++ ++..+++.+-.+||++||.......
T Consensus 86 ~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~ 152 (259)
T d1xq1a_ 86 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA 152 (259)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------
T ss_pred CcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc
Confidence 79999872 011 3344566778899999997765443
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.00 E-value=2.1e-09 Score=89.45 Aligned_cols=102 Identities=17% Similarity=0.181 Sum_probs=77.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvDa 166 (209)
+.+|||||++.||+.++++|.++|++|.+..|++++... ..+..+..+.+|++|++++.++++ ++|.
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 457999999999999999999999999999998876532 234568889999999999887763 6899
Q ss_pred EEEcC------------------------hhH------HHHHHHhC-CCCEEEEecccccccCCCC
Q 028418 167 IICPS------------------------EGF------ISNAGSLK-GVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 167 VIh~a------------------------~g~------ll~AA~~a-GVkriV~vSS~~Vyg~~~~ 201 (209)
+|+.+ .+. ++....+. .-.+||++||.......++
T Consensus 82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~ 147 (255)
T d1gega_ 82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE 147 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT
T ss_pred EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc
Confidence 99872 011 22333333 4578999999876654443
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=1.3e-09 Score=90.79 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=78.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh----h----cCCceEEEEccCCCHHHHHHhhc-------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S----FGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~----~----~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
.++++|||||++.||+.++++|.++|++|.+..|+.++..+ . .+..+..+.+|++|++.++++++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999998865321 1 12457889999999999888764
Q ss_pred CCcEEEEcC----------------hhH------HHHHHHhCC---CCEEEEecccccccCCCC
Q 028418 163 GVRSIICPS----------------EGF------ISNAGSLKG---VQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 GvDaVIh~a----------------~g~------ll~AA~~aG---VkriV~vSS~~Vyg~~~~ 201 (209)
.+|.+|+.+ .+. ++..+++.+ -.+||++||.......++
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~ 145 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ 145 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC
Confidence 689999982 011 234443332 267999999876554433
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.98 E-value=1.5e-09 Score=90.06 Aligned_cols=102 Identities=10% Similarity=0.184 Sum_probs=78.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCc-------EEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc----
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTR-------IKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~-------VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
..||||||++.||+.++++|.++|++ |....|+.++... ..+..+.++.+|++|++.+.++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999998 7788888765432 124567889999999998887764
Q ss_pred ---CCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 163 ---GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 ---GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+|.+|+.+ .+. ++..+++.+-.+||++||...+...++
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~ 153 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH 153 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCC
Confidence 689999882 011 345566777789999999877655543
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.98 E-value=3.1e-10 Score=90.89 Aligned_cols=75 Identities=12% Similarity=0.109 Sum_probs=65.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-----CCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-----~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+...++||||||+|.||+.++++|+++|++|.++.|+.++..... ...+++...|+.|++.+.+++.++|.|||+
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~ 99 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA 99 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence 557889999999999999999999999999999999987654221 133577889999999999999999999998
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.97 E-value=2.2e-09 Score=89.25 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=79.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
++.+|||||++.||+.++++|.++|++|.+..|++++..+ ..+..+..+++|++|+++++++++ .+|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999999999999999999998765432 234568899999999999988764 689
Q ss_pred EEEEcC-------------h-----------hH--HHHHH------HhCCCCEEEEecccccccCCCC
Q 028418 166 SIICPS-------------E-----------GF--ISNAG------SLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 166 aVIh~a-------------~-----------g~--ll~AA------~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+|+++ + +. +.+++ ++.+-.+||++||.......++
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~ 149 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH 149 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc
Confidence 999882 0 11 33333 3456689999999876554443
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.96 E-value=1.6e-09 Score=90.07 Aligned_cols=101 Identities=17% Similarity=0.229 Sum_probs=77.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchh------hhcCCceEEEEccCCCHHHHHHhhc-------CCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAM------ESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~------~~~~~~vevv~GDl~D~~sL~~AL~-------GvD 165 (209)
+.||||||++.||+.++++|+++|++|.+..++. +..+ ...+.++..+.+|++|++.++++++ .+|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5799999999999999999999999998876544 3322 2235668899999999999988764 689
Q ss_pred EEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 166 SIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 166 aVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
.+|+.+ .+. ++..+++.+-.+||++||.......+
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~ 146 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI 146 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCC
Confidence 999982 011 34455666778999999987654443
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.94 E-value=2.6e-09 Score=90.06 Aligned_cols=73 Identities=23% Similarity=0.363 Sum_probs=63.0
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
..+++|||||++.||+.++++|.++|++|.+..|++++..+ .++..+..+.+|++|++.++++++ .+|.+
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil 83 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL 83 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence 46899999999999999999999999999999999876532 345668899999999998888763 78999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|+.
T Consensus 84 vnn 86 (276)
T d1bdba_ 84 IPN 86 (276)
T ss_dssp ECC
T ss_pred ccc
Confidence 987
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.91 E-value=3.6e-09 Score=90.55 Aligned_cols=101 Identities=9% Similarity=0.121 Sum_probs=77.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-----------hcCCceEEEEccCCCHHHHHHhhc---
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----------SFGTYVESMAGDASNKKFLKTALR--- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-----------~~~~~vevv~GDl~D~~sL~~AL~--- 162 (209)
...+++|||||++.||+.++++|+++|++|.+..|+.++... ..+..+..+.+|++|++++.++++
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 467899999999999999999999999999999998765421 123468889999999999887763
Q ss_pred ----CCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEeccccccc
Q 028418 163 ----GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 163 ----GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
.+|.+|+.+ .+. ++..+++.+-.+||.+|+....+
T Consensus 90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~ 158 (297)
T d1yxma1 90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG 158 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC
T ss_pred HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc
Confidence 689999982 011 23344566778899887755443
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.91 E-value=6.4e-09 Score=85.43 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=78.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC-HHHHHHhhcCCcEEEEcC-----
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPS----- 171 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D-~~sL~~AL~GvDaVIh~a----- 171 (209)
..+++|||||++.||+.++++|+++|++|.+..|+.+...+. ..+++..|+++ .+.+.+.+..+|.+|+.+
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~ 79 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---GHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKA 79 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---CSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---CCcEEEcchHHHHHHHHHHhCCCcEEEecccccCC
Confidence 467999999999999999999999999999999988765432 35788999976 456667778899999982
Q ss_pred --------h-----------hH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 --------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 --------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+ +. ++..+++.+-.+||++||........+
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~ 134 (234)
T d1o5ia_ 80 GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN 134 (234)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT
T ss_pred cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccc
Confidence 0 11 344556778889999999876655443
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.90 E-value=4.9e-09 Score=86.25 Aligned_cols=72 Identities=13% Similarity=0.203 Sum_probs=60.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHH---CCCcEEEEEeCCcchhhh-----cCCceEEEEccCCCHHHHHHhhc--------
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------- 162 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~---~G~~VraLvR~~~~a~~~-----~~~~vevv~GDl~D~~sL~~AL~-------- 162 (209)
|++||||||++.||+.++++|++ +|++|.+..|+++++... .+.++.++.+|++|+++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 68999999999999999999974 799999999998775422 24578999999999998876643
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
.+|.+|+.
T Consensus 82 ~~iDiLvnN 90 (248)
T d1snya_ 82 QGLNVLFNN 90 (248)
T ss_dssp GCCSEEEEC
T ss_pred CCcceEEee
Confidence 47999987
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.90 E-value=4.2e-09 Score=88.61 Aligned_cols=101 Identities=9% Similarity=0.098 Sum_probs=77.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh------c---CCceEEEEccCCCHHHHHHhhc------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F---GTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~------~---~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
..+++|||||++.||+.++++|+++|++|.+..|+.++.... . ...+..+.+|++|++.+.++++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999987654311 1 1357899999999998887764
Q ss_pred -CCcEEEEcC---------------h-----------hH------HHHHHHhCCCCEEEEecccccccC
Q 028418 163 -GVRSIICPS---------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHS 198 (209)
Q Consensus 163 -GvDaVIh~a---------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~ 198 (209)
.+|.+|+.+ + +. ++..+++.+-.+||++||.+....
T Consensus 83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~ 151 (274)
T d1xhla_ 83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA 151 (274)
T ss_dssp SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC
T ss_pred CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc
Confidence 679999871 0 11 233455677788888888665443
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.86 E-value=6.9e-09 Score=77.51 Aligned_cols=91 Identities=9% Similarity=0.046 Sum_probs=73.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc-C--hhH-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP-S--EGF- 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~-a--~g~- 174 (209)
++++|.|+ |.+|+++++.|.++|++|+++..+++........+..++.||.+|++.|.+| +..+|+||.+ . ...
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~ 79 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAS 79 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHHhH
Confidence 46888877 9999999999999999999999999887766666678999999999999998 8899999887 2 222
Q ss_pred --HHHHHHhCCCCEEEEec
Q 028418 175 --ISNAGSLKGVQHVILLS 191 (209)
Q Consensus 175 --ll~AA~~aGVkriV~vS 191 (209)
+..+++..+..+++-..
T Consensus 80 ~~~~~~~~~~~~~~iiar~ 98 (134)
T d2hmva1 80 TLTTLLLKELDIPNIWVKA 98 (134)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCcEEeec
Confidence 33445677888776543
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.85 E-value=1.2e-08 Score=84.83 Aligned_cols=75 Identities=16% Similarity=0.352 Sum_probs=64.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
+...+++|||||++.||+.++++|+++|++|.+..|+.++.. ...+..+..+++|++|++++.++++
T Consensus 6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 85 (260)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 456789999999999999999999999999999999987643 2235678899999999999888774
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
.+|.+|++
T Consensus 86 g~iDilVnn 94 (260)
T d1h5qa_ 86 GPISGLIAN 94 (260)
T ss_dssp CSEEEEEEC
T ss_pred CCCcEeccc
Confidence 68999987
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.82 E-value=9.6e-09 Score=85.64 Aligned_cols=74 Identities=12% Similarity=0.160 Sum_probs=62.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---------cCCceEEEEccCCCHHHHHHhhc-----
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALR----- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---------~~~~vevv~GDl~D~~sL~~AL~----- 162 (209)
...+.+|||||++.||+.++++|+++|++|.+..|+.++..+. ...++..+.+|++|++.++++++
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 82 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999987654321 12348899999999999888774
Q ss_pred --CCcEEEEc
Q 028418 163 --GVRSIICP 170 (209)
Q Consensus 163 --GvDaVIh~ 170 (209)
.+|.+|++
T Consensus 83 ~g~iDilvnn 92 (264)
T d1spxa_ 83 FGKLDILVNN 92 (264)
T ss_dssp HSCCCEEEEC
T ss_pred hCCCCEeecc
Confidence 68999987
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.82 E-value=9.8e-09 Score=86.09 Aligned_cols=73 Identities=11% Similarity=0.188 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh----h--c---CCceEEEEccCCCHHHHHHhhc------
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S--F---GTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~----~--~---~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
..+++|||||++.||+.++++|.++|++|.+..|+.++..+ . . ...+..+++|++|+++++++++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999998865431 1 1 1347899999999998887764
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
.+|.+|+.
T Consensus 84 g~iDilvnn 92 (272)
T d1xkqa_ 84 GKIDVLVNN 92 (272)
T ss_dssp SCCCEEEEC
T ss_pred CCceEEEeC
Confidence 68999987
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.81 E-value=1.6e-08 Score=84.57 Aligned_cols=75 Identities=11% Similarity=0.133 Sum_probs=63.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-------hhcCCceEEEEccCCCHHHHHHhh-------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTAL------- 161 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-------~~~~~~vevv~GDl~D~~sL~~AL------- 161 (209)
...++++|||||||.||+.++++|+++|++|.+..|+.++.. ...+..+.++.+|++|++++.+++
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 101 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 101 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence 566789999999999999999999999999999999886532 123456889999999999987765
Q ss_pred cCCcEEEEc
Q 028418 162 RGVRSIICP 170 (209)
Q Consensus 162 ~GvDaVIh~ 170 (209)
.++|.+|++
T Consensus 102 g~iDilvnn 110 (294)
T d1w6ua_ 102 GHPNIVINN 110 (294)
T ss_dssp CSCSEEEEC
T ss_pred cccchhhhh
Confidence 378999998
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.79 E-value=1.5e-08 Score=85.69 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=75.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE---eCCcchh---------hhcCCceEEEEccCCCHHHHHHhhc----
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV---KDKRNAM---------ESFGTYVESMAGDASNKKFLKTALR---- 162 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv---R~~~~a~---------~~~~~~vevv~GDl~D~~sL~~AL~---- 162 (209)
++.||||||++.||+.++++|.++|.+|..+. |+.+... ...+..+..+.+|++|++++.++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 56789999999999999999999998866554 4433221 1124568999999999999998874
Q ss_pred -CCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 163 -GVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 163 -GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
.+|.+++.+ .|. ++..+++.+-.+||++||.......++
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~ 151 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF 151 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCC
Confidence 478888872 011 345567778899999999876554433
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.78 E-value=5.2e-08 Score=81.16 Aligned_cols=105 Identities=11% Similarity=0.055 Sum_probs=76.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh------hc-CCceEEEEccCC-CHHHHHHhh-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SF-GTYVESMAGDAS-NKKFLKTAL------- 161 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~------~~-~~~vevv~GDl~-D~~sL~~AL------- 161 (209)
...++||||||++.||..++++|+++|++|.++.|+.++... .. ..++.++..|++ +.+.+.+++
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 82 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999999998765321 11 246888999998 555565554
Q ss_pred cCCcEEEEcC----------------hhH------HHHHHHhC---CCCEEEEecccccccCCCC
Q 028418 162 RGVRSIICPS----------------EGF------ISNAGSLK---GVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 162 ~GvDaVIh~a----------------~g~------ll~AA~~a---GVkriV~vSS~~Vyg~~~~ 201 (209)
..+|.+|+.+ .++ ++..+.+. .-.+||++||...+....+
T Consensus 83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~ 147 (254)
T d1sbya1 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ 147 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT
T ss_pred CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC
Confidence 4789999982 111 33344332 4578999999887655443
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=3.2e-08 Score=81.93 Aligned_cols=99 Identities=12% Similarity=0.096 Sum_probs=77.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHHHHHHhh---cCCcEEEEcC-
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTAL---RGVRSIICPS- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~sL~~AL---~GvDaVIh~a- 171 (209)
...+++|||||++.||+.+++.|+++|++|.+..|++++..+.. ..+++....|+.+.+.++... .++|.+||++
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag 83 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence 46789999999999999999999999999999999986654322 245889999999988777665 4789999982
Q ss_pred ------------h-----------hH------HHHHHHhCCCCEEEEeccccc
Q 028418 172 ------------E-----------GF------ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 172 ------------~-----------g~------ll~AA~~aGVkriV~vSS~~V 195 (209)
+ ++ ++....+.+-.+||++||...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~ 136 (245)
T d2ag5a1 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS 136 (245)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT
T ss_pred ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh
Confidence 0 11 234456667789999998644
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.72 E-value=2e-08 Score=82.97 Aligned_cols=73 Identities=15% Similarity=0.221 Sum_probs=63.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhc-------CCcEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~-------GvDaV 167 (209)
..+++|||||++.||+.++++|+++|++|.+..|+.++.. ...+..+.++++|++|++.++++++ .+|.+
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL 83 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 83 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence 5689999999999999999999999999999999887653 2345668889999999999977664 68999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|+.
T Consensus 84 inn 86 (241)
T d2a4ka1 84 AHF 86 (241)
T ss_dssp EEG
T ss_pred ccc
Confidence 997
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=6.5e-08 Score=80.55 Aligned_cols=103 Identities=13% Similarity=0.143 Sum_probs=77.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-------hcCCceEEEEccCCCHHHHHHhh-------c
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTAL-------R 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-------~~~~~vevv~GDl~D~~sL~~AL-------~ 162 (209)
..++++||||||+.||+.++++|+++|++|.+..|+.++..+ ..+..+..+..|+.+........ .
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 667899999999999999999999999999999999875432 23455788999999988776654 3
Q ss_pred CCcEEEEcC-------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCC
Q 028418 163 GVRSIICPS-------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSS 200 (209)
Q Consensus 163 GvDaVIh~a-------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~ 200 (209)
+.|.+++.+ + +. ++..+++.+ .+||++||.+.+...+
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~-G~ii~isS~~~~~~~p 158 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYP 158 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSCCT
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC-CcceEeccchhcCCCC
Confidence 678888761 0 11 233444433 7999999987654443
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.70 E-value=7.9e-08 Score=79.99 Aligned_cols=75 Identities=9% Similarity=0.113 Sum_probs=62.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h------hhcCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~------~~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
....+++|||||++.||+.++++|+++|++|.+..|+.+.. . ...+..+.++++|++|++.+.+.++
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 94 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 94 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence 35578999999999999999999999999999998876432 1 1234568899999999998887764
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
++|.+++.
T Consensus 95 g~idilV~n 103 (272)
T d1g0oa_ 95 GKLDIVCSN 103 (272)
T ss_dssp SCCCEEEEC
T ss_pred CCCCccccc
Confidence 67999987
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.69 E-value=7.6e-09 Score=86.30 Aligned_cols=71 Identities=17% Similarity=0.183 Sum_probs=59.2
Q ss_pred CeE-EEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchhh------hcCCceEEEEccCCCHHHHHHhhc-------CC
Q 028418 100 DAV-LVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAME------SFGTYVESMAGDASNKKFLKTALR-------GV 164 (209)
Q Consensus 100 ~~I-LVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~~------~~~~~vevv~GDl~D~~sL~~AL~-------Gv 164 (209)
++| |||||++.||..++++|+++ |+.|.+..|+.++.+. ..+..++++++|++|.++++++++ .+
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i 82 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 82 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 455 89999999999999999986 8999999999876532 224568999999999999887653 68
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.+|+.
T Consensus 83 DiLVnN 88 (275)
T d1wmaa1 83 DVLVNN 88 (275)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 999987
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.69 E-value=2.3e-08 Score=82.17 Aligned_cols=72 Identities=24% Similarity=0.287 Sum_probs=60.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhh---hcCCceEEEEccCCCHHHHHHhhc---------CC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR---------GV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~---~~~~~vevv~GDl~D~~sL~~AL~---------Gv 164 (209)
.++||||||++.||..++++|+++|+ .|.+..|+.++..+ ..+.++.++..|++|.++++++++ ++
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 37999999999999999999999996 57777898876543 234678999999999998887753 48
Q ss_pred cEEEEc
Q 028418 165 RSIICP 170 (209)
Q Consensus 165 DaVIh~ 170 (209)
|.+|++
T Consensus 83 dilinn 88 (250)
T d1yo6a1 83 SLLINN 88 (250)
T ss_dssp CEEEEC
T ss_pred EEEEEc
Confidence 999988
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.68 E-value=3.1e-09 Score=88.29 Aligned_cols=102 Identities=10% Similarity=0.009 Sum_probs=72.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-------cCCcEEEEcC-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICPS- 171 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-------~GvDaVIh~a- 171 (209)
.++|||||++.||+.++++|.++|++|.+..|+.+...+.......+.+.|++|.+.+++++ -.+|.+|+.+
T Consensus 1 ~TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg 80 (252)
T d1zmta1 1 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI 80 (252)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 37899999999999999999999999999999876654322112234466777766655544 3789999861
Q ss_pred -------------h-----------hH------HHHHHHhCCCCEEEEecccccccCCCC
Q 028418 172 -------------E-----------GF------ISNAGSLKGVQHVILLSQRQRWHSSSN 201 (209)
Q Consensus 172 -------------~-----------g~------ll~AA~~aGVkriV~vSS~~Vyg~~~~ 201 (209)
+ +. ++..+++.+-.+||++||.......++
T Consensus 81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~ 140 (252)
T d1zmta1 81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE 140 (252)
T ss_dssp CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccc
Confidence 0 10 234456667789999999887655443
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.63 E-value=4.8e-08 Score=80.68 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=53.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHH---CCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTAL 161 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~---~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL 161 (209)
..++.++||||++.||+.++++|.+ +|++|.+..|+.++.... .+..+..+.+|++|++.+.+++
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~ 79 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLL 79 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence 4567899999999999999999974 799999999988765321 1235788999999999988776
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.60 E-value=3.6e-08 Score=84.45 Aligned_cols=103 Identities=8% Similarity=0.021 Sum_probs=73.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch---------hh---hcCCceEEEEccCCCHHHHHHhh---
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---------ME---SFGTYVESMAGDASNKKFLKTAL--- 161 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a---------~~---~~~~~vevv~GDl~D~~sL~~AL--- 161 (209)
...+++|||||++.||+.++++|.++|++|.+..|+.+.. .. ........+..|+.|.+.+++++
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 84 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA 84 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence 4567999999999999999999999999999987754321 11 11122345678888887766554
Q ss_pred ----cCCcEEEEcC------------------------hhH------HHHHHHhCCCCEEEEecccccccCC
Q 028418 162 ----RGVRSIICPS------------------------EGF------ISNAGSLKGVQHVILLSQRQRWHSS 199 (209)
Q Consensus 162 ----~GvDaVIh~a------------------------~g~------ll~AA~~aGVkriV~vSS~~Vyg~~ 199 (209)
..+|.+|+.+ .+. ++..+++.+-.|||++||.......
T Consensus 85 ~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~ 156 (302)
T d1gz6a_ 85 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN 156 (302)
T ss_dssp HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred HHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC
Confidence 3789999982 011 3455667777899999997765433
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.60 E-value=4.7e-08 Score=80.99 Aligned_cols=74 Identities=15% Similarity=0.178 Sum_probs=61.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-h------hhcCCceEEEEccCCCHHHHHHhhc-------
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-M------ESFGTYVESMAGDASNKKFLKTALR------- 162 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~------~~~~~~vevv~GDl~D~~sL~~AL~------- 162 (209)
...+++|||||++.||.++++.|+++|++|.+..|+.++. . ...+..+..+.+|++|++.+.++++
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 83 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999999887765442 1 1235568899999999999888764
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|++|+.
T Consensus 84 ~idilinn 91 (259)
T d1ja9a_ 84 GLDFVMSN 91 (259)
T ss_dssp CEEEEECC
T ss_pred CCcEEEec
Confidence 68999988
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.52 E-value=1.4e-07 Score=76.81 Aligned_cols=67 Identities=12% Similarity=0.183 Sum_probs=50.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-------h--cCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-------L--RGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-------L--~GvDaVIh~ 170 (209)
.+||||||++.||+.++++|+++|++|.++.|++.... .....+.+|..+.+..... + ..+|.+|++
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linn 78 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV 78 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence 47999999999999999999999999999999876432 1223456677665544432 2 247999997
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.51 E-value=1.5e-07 Score=77.30 Aligned_cols=75 Identities=11% Similarity=0.081 Sum_probs=59.7
Q ss_pred cCCCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCcchh-----hhcCCceEEEEccCCCHHHHHHhhc------
Q 028418 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALR------ 162 (209)
Q Consensus 96 ~~~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~~a~-----~~~~~~vevv~GDl~D~~sL~~AL~------ 162 (209)
+...+++|||||+| .||+.++++|+++|++|.+..|+.+... ........++++|++|++.++++++
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence 35678999999998 6999999999999999987777654321 1122456789999999998888764
Q ss_pred -CCcEEEEc
Q 028418 163 -GVRSIICP 170 (209)
Q Consensus 163 -GvDaVIh~ 170 (209)
++|.+||+
T Consensus 85 g~iDilVnn 93 (256)
T d1ulua_ 85 GGLDYLVHA 93 (256)
T ss_dssp SSEEEEEEC
T ss_pred CCceEEEec
Confidence 68999987
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.50 E-value=7.4e-07 Score=72.42 Aligned_cols=74 Identities=18% Similarity=0.148 Sum_probs=59.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhh-------cCCcE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL-------~GvDa 166 (209)
..++.+|||||++.||+.++++|.++|++|.+..|+.++.. ..+.........|+.+...+++.. ...|.
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 82 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence 45789999999999999999999999999999999987654 234566788999999988766554 34576
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
+++.
T Consensus 83 ~~~~ 86 (248)
T d2o23a1 83 AVNC 86 (248)
T ss_dssp EEEC
T ss_pred cccc
Confidence 6654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.48 E-value=2.7e-07 Score=75.29 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=49.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-------hc--CCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-------LR--GVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-------L~--GvDaVIh 169 (209)
.++||||||+|.||+.++++|+++|++|.++.|+..... .....+..|..+.+..+.. +. .+|.+|+
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lIn 77 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC 77 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 579999999999999999999999999999988665422 1123445555555544322 22 4799998
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 78 n 78 (236)
T d1dhra_ 78 V 78 (236)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=98.33 E-value=3.2e-06 Score=64.27 Aligned_cols=71 Identities=20% Similarity=0.336 Sum_probs=60.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch----hhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a----~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
++.|+|.|. |.+|+.++++|.++|++|+++..++++. ......++.++.||.+|++.|.+| ++.+++||.+
T Consensus 3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~ 78 (153)
T d1id1a_ 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEc
Confidence 567999998 8999999999999999999999988642 334456799999999999999877 5789999987
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.28 E-value=1.3e-06 Score=65.68 Aligned_cols=71 Identities=10% Similarity=0.076 Sum_probs=59.7
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.++|||.|| |++|+++++.|.++||+|.+..|+.+++..... ........+..+...+.+.+...|.++.+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~ 74 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISL 74 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEee
Confidence 578999987 999999999999999999999999988764322 33556667888888899999999999876
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.23 E-value=1.8e-06 Score=70.67 Aligned_cols=73 Identities=10% Similarity=-0.018 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCcchh-----hhcCCceEEEEccCCCHHHHHHhh-------cC
Q 028418 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTAL-------RG 163 (209)
Q Consensus 98 ~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~~a~-----~~~~~~vevv~GDl~D~~sL~~AL-------~G 163 (209)
..+++|||||+| .||..++++|+++|++|.+..|+.+... ........++..|+++.+.+.+++ ..
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~ 83 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 83 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence 468999999988 6999999999999999999999864221 112345778999999999888776 36
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.+|++
T Consensus 84 id~lV~n 90 (274)
T d2pd4a1 84 LDFIVHS 90 (274)
T ss_dssp EEEEEEC
T ss_pred CCeEEee
Confidence 7999987
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.22 E-value=1e-06 Score=71.66 Aligned_cols=73 Identities=11% Similarity=0.089 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCCH--HHHHHHHHHHHCCCcEEEEEeCCcch----hhhcCCceEEEEccCCCHHHHHHhh----------
Q 028418 98 ARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTAL---------- 161 (209)
Q Consensus 98 ~~~~ILVTGATGf--IG~~VV~~Ll~~G~~VraLvR~~~~a----~~~~~~~vevv~GDl~D~~sL~~AL---------- 161 (209)
..+++|||||+|. ||+.++++|.++|++|....|+.++. .+.++..+..+++|+++++++.+++
T Consensus 5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~ 84 (268)
T d2h7ma1 5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 84 (268)
T ss_dssp TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccC
Confidence 4679999998764 99999999999999999999988654 2334556788999999997665553
Q ss_pred cCCcEEEEc
Q 028418 162 RGVRSIICP 170 (209)
Q Consensus 162 ~GvDaVIh~ 170 (209)
..+|.++++
T Consensus 85 ~~ld~~i~~ 93 (268)
T d2h7ma1 85 NKLDGVVHS 93 (268)
T ss_dssp CCEEEEEEC
T ss_pred CCcceeeec
Confidence 235888887
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.13 E-value=2.5e-06 Score=67.87 Aligned_cols=56 Identities=23% Similarity=0.358 Sum_probs=48.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL 161 (209)
+++|||||++.||+.++++|.++|++|.+..|+.+.. ......+|+.+......+.
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~------~~~~~~~d~~~~~~~~~~~ 57 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE------DLIYVEGDVTREEDVRRAV 57 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS------SSEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc------cceEeeccccchhhhHHHH
Confidence 6899999999999999999999999999999987653 2456789999988777665
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.08 E-value=1.2e-06 Score=65.17 Aligned_cols=38 Identities=18% Similarity=0.204 Sum_probs=35.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
|||.|+||+|.+|+.+++.|.++||+|.+..|+++++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~ 38 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE 38 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 68999999999999999999999999999999987754
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.06 E-value=1e-05 Score=62.94 Aligned_cols=94 Identities=13% Similarity=0.063 Sum_probs=56.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC----CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-hh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G----~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~g 173 (209)
|++|.|.||||++|+.+++.|+++. .+++++.++...........-+...-+..+. .++.++|.||++. .+
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~----~~~~~~DivF~a~~~~ 76 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL----EALKALDIIVTCQGGD 76 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCH----HHHHTCSEEEECSCHH
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccch----hhhhcCcEEEEecCch
Confidence 5689999999999999999888753 3566666544332211101112222233443 3578999999983 22
Q ss_pred H---HHHHHHhCCCCEEEEeccccccc
Q 028418 174 F---ISNAGSLKGVQHVILLSQRQRWH 197 (209)
Q Consensus 174 ~---ll~AA~~aGVkriV~vSS~~Vyg 197 (209)
. +...+.++|.+-+| ++..+.|+
T Consensus 77 ~s~~~~~~~~~~g~~~~V-ID~Ss~fR 102 (146)
T d1t4ba1 77 YTNEIYPKLRESGWQGYW-IDAASSLR 102 (146)
T ss_dssp HHHHHHHHHHHTTCCCEE-EECSSTTT
T ss_pred HHHHhhHHHHhcCCCeec-ccCCcccc
Confidence 2 66667778865333 34444443
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.06 E-value=8.5e-06 Score=65.43 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=47.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh--------cCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--------RGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL--------~GvDaVIh~ 170 (209)
|+.||||||++.||+.++++|.++|++|.++.|+.++. ..|+.+......+. ..+|.+++.
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~ 69 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------IADLSTAEGRKQAIADVLAKCSKGMDGLVLC 69 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-----------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEEc
Confidence 57899999999999999999999999999999876532 34566665544432 357999886
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=98.03 E-value=8.3e-07 Score=66.94 Aligned_cols=66 Identities=11% Similarity=0.080 Sum_probs=47.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--CCc--eEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTY--VESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~~~--vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|+|.|+ |.+|+.+...|.+.||+|.++.|++++..... ... .........+ .+++..+|.||++
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~iii~ 70 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND----PDFLATSDLLLVT 70 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC----HHHHHTCSEEEEC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccch----hhhhcccceEEEe
Confidence 78999999 99999999999999999999999987654211 111 1111111123 3456789999988
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.96 E-value=8.9e-06 Score=66.26 Aligned_cols=72 Identities=7% Similarity=-0.034 Sum_probs=53.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh--------hhcCCceEE-----------------EEccCCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--------ESFGTYVES-----------------MAGDASN 153 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~--------~~~~~~vev-----------------v~GDl~D 153 (209)
++.+|||||++.||+.++++|.++|++|.+..|+.+... ...+..+.. ...|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 567899999999999999999999999999887654321 111222333 3456888
Q ss_pred HHHHHHhh-------cCCcEEEEc
Q 028418 154 KKFLKTAL-------RGVRSIICP 170 (209)
Q Consensus 154 ~~sL~~AL-------~GvDaVIh~ 170 (209)
++.+++++ -.+|.+|++
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnn 105 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNN 105 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEec
Confidence 88887765 478999987
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.94 E-value=3e-05 Score=60.50 Aligned_cols=89 Identities=15% Similarity=0.141 Sum_probs=54.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-C---cEEEEEeCCcchhhh-cCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Chh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR-T---RIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG 173 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G-~---~VraLvR~~~~a~~~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g 173 (209)
|+|.|.||||++|+.+++.|+++. | +++.+..+...-+.. +.. -+...-+..|. ..++++|.||.+ ..+
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~-~~~~~~~~~~~----~~~~~~DvvF~alp~~ 75 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGK-DAGMLHDAFDI----ESLKQLDAVITCQGGS 75 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSS-CCCBCEETTCH----HHHTTCSEEEECSCHH
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCC-cceeeecccch----hhhccccEEEEecCch
Confidence 589999999999999999888754 3 455555332211111 111 11122233343 346899999998 333
Q ss_pred H---HHHHHHhCCCC-EEEEeccc
Q 028418 174 F---ISNAGSLKGVQ-HVILLSQR 193 (209)
Q Consensus 174 ~---ll~AA~~aGVk-riV~vSS~ 193 (209)
. +.....++|.+ .+|=+|+.
T Consensus 76 ~s~~~~~~l~~~g~~~~VIDlSsd 99 (147)
T d1mb4a1 76 YTEKVYPALRQAGWKGYWIDAAST 99 (147)
T ss_dssp HHHHHHHHHHHTTCCSEEEESSST
T ss_pred HHHHHhHHHHHcCCceEEEeCCcc
Confidence 2 66777888876 45555653
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=97.94 E-value=8.8e-06 Score=65.81 Aligned_cols=73 Identities=10% Similarity=0.044 Sum_probs=57.6
Q ss_pred CCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCCcchhh-----hcCCceEEEEccCCCHHHHHHhhc-------C
Q 028418 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAME-----SFGTYVESMAGDASNKKFLKTALR-------G 163 (209)
Q Consensus 98 ~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~~~a~~-----~~~~~vevv~GDl~D~~sL~~AL~-------G 163 (209)
.++++|||||+| .||+.+++.|+++|++|.+..|+.+.... ........+..|+.+..+..+.+. .
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 83 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence 578999999999 79999999999999999999998653321 112346788999999888777763 4
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
.|.++|.
T Consensus 84 ~d~~v~~ 90 (258)
T d1qsga_ 84 FDGFVHS 90 (258)
T ss_dssp EEEEEEC
T ss_pred cceEEEe
Confidence 5788876
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=97.92 E-value=1.2e-05 Score=64.81 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=52.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--------hcCCceEEEEccCCC----HHHHHH-------h
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--------SFGTYVESMAGDASN----KKFLKT-------A 160 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--------~~~~~vevv~GDl~D----~~sL~~-------A 160 (209)
++.|||||++.||+.++++|+++|++|....|+.++..+ ..+..+..+..|+.+ .+.+.+ .
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999998765321 123445566666644 333322 3
Q ss_pred hcCCcEEEEc
Q 028418 161 LRGVRSIICP 170 (209)
Q Consensus 161 L~GvDaVIh~ 170 (209)
+.++|.+|+.
T Consensus 82 ~g~iDilvnn 91 (266)
T d1mxha_ 82 FGRCDVLVNN 91 (266)
T ss_dssp HSCCCEEEEC
T ss_pred hCCCCEEEEC
Confidence 3478999987
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.88 E-value=8.3e-06 Score=63.43 Aligned_cols=74 Identities=14% Similarity=0.091 Sum_probs=55.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
-.+.++|||+||+|-+|...++.+...|.+|.+.++++++......-+++.+. |..+...-....+|+|.||-+
T Consensus 25 ~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i-~~~~~~~~~~~~~g~D~v~d~ 98 (171)
T d1iz0a2 25 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAA-TYAEVPERAKAWGGLDLVLEV 98 (171)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEE-EGGGHHHHHHHTTSEEEEEEC
T ss_pred CCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceee-ehhhhhhhhhccccccccccc
Confidence 35788999999999999999999999999999999988765433222343332 455544444556799999987
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.88 E-value=1e-05 Score=62.44 Aligned_cols=93 Identities=13% Similarity=0.108 Sum_probs=62.1
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh---h--cCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA---L--RGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A---L--~GvDaVIh~a 171 (209)
.+.++|||+||+|.+|...++.+...|.+|.++++++++.......+++.+ .|..+++..++. . +++|.||.+.
T Consensus 27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~ 105 (174)
T d1yb5a2 27 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEML 105 (174)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccc-cccccccHHHHhhhhhccCCceEEeecc
Confidence 467799999999999999999999999999999988765433222223222 266666544433 2 3689999873
Q ss_pred hhH----HHHHHHhCCCCEEEEecc
Q 028418 172 EGF----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~----ll~AA~~aGVkriV~vSS 192 (209)
-+. .+++.+.. .++|.+..
T Consensus 106 g~~~~~~~~~~l~~~--G~iv~~G~ 128 (174)
T d1yb5a2 106 ANVNLSKDLSLLSHG--GRVIVVGS 128 (174)
T ss_dssp HHHHHHHHHHHEEEE--EEEEECCC
T ss_pred cHHHHHHHHhccCCC--CEEEEEec
Confidence 232 33333333 57777643
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.75 E-value=1.6e-05 Score=61.21 Aligned_cols=95 Identities=16% Similarity=0.145 Sum_probs=63.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHH---Hhh--cCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK---TAL--RGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~---~AL--~GvDaVIh~a 171 (209)
.+.++|||+||+|.+|...++.+...|.+|.+.++++++.......+++.+ .|..+++..+ +.. +|+|.||.+.
T Consensus 24 ~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~ 102 (183)
T d1pqwa_ 24 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSL 102 (183)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCCEEEEECCCCCcccccchhhccccccceeeeccccccccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEecc
Confidence 356799999999999999999999999999999998776543333344433 3455554333 333 4799999883
Q ss_pred hh-H---HHHHHHhCCCCEEEEecccc
Q 028418 172 EG-F---ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 172 ~g-~---ll~AA~~aGVkriV~vSS~~ 194 (209)
-+ + .+++++.. .|+|.+...+
T Consensus 103 g~~~~~~~~~~l~~~--G~~v~~G~~~ 127 (183)
T d1pqwa_ 103 AGEAIQRGVQILAPG--GRFIELGKKD 127 (183)
T ss_dssp CTHHHHHHHHTEEEE--EEEEECSCGG
T ss_pred cchHHHHHHHHhcCC--CEEEEEccCC
Confidence 22 2 33333333 5788775443
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.73 E-value=1.1e-05 Score=62.74 Aligned_cols=98 Identities=8% Similarity=0.015 Sum_probs=62.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceE-EE-EccCCCHHHHHHhh--cCCcEEEEcCh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVE-SM-AGDASNKKFLKTAL--RGVRSIICPSE 172 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~ve-vv-~GDl~D~~sL~~AL--~GvDaVIh~a~ 172 (209)
.+.++|||+||+|.+|...++.....|.+|.+++|++++.......+.+ ++ .-|-...+.+.+.. +|+|.||.+.-
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG 107 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 107 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence 4678999999999999999999999999999999988765432222232 22 23333334443333 57999998832
Q ss_pred hH----HHHHHHhCCCCEEEEecccccc
Q 028418 173 GF----ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 173 g~----ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+. .+++++.. .++|.+...+.+
T Consensus 108 ~~~~~~~~~~l~~~--G~~v~~G~~~~~ 133 (182)
T d1v3va2 108 GEFLNTVLSQMKDF--GKIAICGAISVY 133 (182)
T ss_dssp HHHHHHHGGGEEEE--EEEEECCCGGGT
T ss_pred chhhhhhhhhccCC--CeEEeecceeec
Confidence 22 22223333 366665554443
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.66 E-value=3.8e-05 Score=56.73 Aligned_cols=67 Identities=19% Similarity=0.275 Sum_probs=56.5
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHh-hcCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~A-L~GvDaVIh~ 170 (209)
-|+|.|. |.+|+.+++.| ++++|.++..+++........++.++.||.+|++.|.+| +..++++|.+
T Consensus 2 HivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~ 69 (129)
T d2fy8a1 2 HVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVN 69 (129)
T ss_dssp CEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEEC
T ss_pred EEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEe
Confidence 3678875 88999999998 578899999988877655556789999999999999987 5789999987
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.65 E-value=5.6e-05 Score=57.35 Aligned_cols=71 Identities=15% Similarity=0.052 Sum_probs=50.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc--C------CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--G------TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~--~------~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.++|.|.|| |.+|..++..|.++||+|.+.+|++++..... + +..+...........+.++++++|.||.+
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 478999998 99999999999999999999999886543221 1 11111111111123467899999999988
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.60 E-value=1.6e-05 Score=61.06 Aligned_cols=73 Identities=8% Similarity=0.096 Sum_probs=52.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHH---Hhh--cCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK---TAL--RGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~---~AL--~GvDaVIh~ 170 (209)
.+.++|||+||+|.+|..+++.+...|.+|.+.++++++.+.....+++.+ .|..+++..+ ++. +++|+||.+
T Consensus 27 ~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~ 104 (179)
T d1qora2 27 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEITGGKKVRVVYDS 104 (179)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeC
Confidence 457799999999999999999999999999999999876543322223322 2566654433 333 357999887
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.56 E-value=5.1e-05 Score=57.80 Aligned_cols=63 Identities=11% Similarity=0.077 Sum_probs=45.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCc-eEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~-vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.|.|+ |.+|+.+++.|.++||+|.+..|+++........+ +.... ++ .++++.+|.||.+
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~---~~----~~~~~~~DiIila 64 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAG---QD----LSLLQTAKIIFLC 64 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEE---SC----GGGGTTCSEEEEC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceee---ee----ccccccccccccc
Confidence 68999976 99999999999999999999999876544322212 11111 11 2478899999877
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.46 E-value=5.7e-05 Score=58.02 Aligned_cols=74 Identities=9% Similarity=0.043 Sum_probs=53.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..+.++|||.|+ |.+|...++.+...|.+|.++++++++......-+++.+.-...+.+..++...+.|.||.+
T Consensus 25 ~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~ 98 (168)
T d1piwa2 25 CGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVC 98 (168)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred cCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEE
Confidence 456789999997 99999999888889999999999887754322212333222223445566667889999987
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.44 E-value=0.00041 Score=51.17 Aligned_cols=84 Identities=11% Similarity=0.048 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcC---h
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---E 172 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a---~ 172 (209)
...+|.|.| .|.+|+.++....+.|++|++++.++........ -+++++|+.|.+.+.+... .+|+|-.=. .
T Consensus 10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va--~~~i~~~~~d~~~l~~~~~~~~~DviT~E~EnI~ 86 (111)
T d1kjqa2 10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVA--HRSHVINMLDGDALRRVVELEKPHYIVPEIEAIA 86 (111)
T ss_dssp TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS--SEEEECCTTCHHHHHHHHHHHCCSEEEECSSCSC
T ss_pred CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcC--CeEEECCCCCHHHHHHHHHhhCCceEEEEecCcC
Confidence 345799999 8999999999999999999999987754333222 3788999999999988764 678885432 1
Q ss_pred hHHHHHHHhCCC
Q 028418 173 GFISNAGSLKGV 184 (209)
Q Consensus 173 g~ll~AA~~aGV 184 (209)
-..++.+.+.|+
T Consensus 87 ~~~L~~le~~g~ 98 (111)
T d1kjqa2 87 TDMLIQLEEEGL 98 (111)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC
Confidence 225666555554
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.44 E-value=0.00056 Score=47.91 Aligned_cols=83 Identities=11% Similarity=0.101 Sum_probs=61.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--- 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a--- 171 (209)
...++|+|.|. |-.|..+++.|.++|++|.+.+.+.... ...+...+.+..+... . ..+.++|.||.. .
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~d~vi~SPGi~~ 76 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLN-D----EWLMAADLIVASPGIAL 76 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCC-H----HHHHHCSEEEECTTSCT
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccc-h----hhhccCCEEEECCCCCC
Confidence 45678999998 8899999999999999999999765432 3334455667666643 2 235678999876 2
Q ss_pred hhHHHHHHHhCCCC
Q 028418 172 EGFISNAGSLKGVQ 185 (209)
Q Consensus 172 ~g~ll~AA~~aGVk 185 (209)
...+++.|++.|++
T Consensus 77 ~~~~~~~a~~~gi~ 90 (93)
T d2jfga1 77 AHPSLSAAADAGIE 90 (93)
T ss_dssp TSHHHHHHHHTTCE
T ss_pred CCHHHHHHHHcCCC
Confidence 23488889999976
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.42 E-value=0.00025 Score=54.48 Aligned_cols=92 Identities=16% Similarity=0.167 Sum_probs=61.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh--hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-----
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS----- 171 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~--~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a----- 171 (209)
+|.|+||+|++|++++..|..++. +++.++.++.+.. .......-.-.-.........++++++|.||.++
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~~ 81 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRK 81 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCCC
Confidence 799999999999999998888874 5777777665432 1111110010111223566788999999999882
Q ss_pred hh---------------HHHHHHHhCCCCEEEEecc
Q 028418 172 EG---------------FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g---------------~ll~AA~~aGVkriV~vSS 192 (209)
.+ .+++++++.+.+-+|.+-|
T Consensus 82 ~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 82 PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 11 1567777888777777655
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.37 E-value=0.00018 Score=54.99 Aligned_cols=88 Identities=16% Similarity=0.108 Sum_probs=52.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC---cEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH-
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGF- 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~---~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~- 174 (209)
++|.|.||||++|+.+++.|.+++| +++.+..+....+......-+...-++ + ...+.++|.+|.+ ..+.
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~---~--~~~~~~~d~vf~a~p~~~s 77 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDV---D--SFDFSSVGLAFFAAAAEVS 77 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEG---G--GCCGGGCSEEEECSCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccc---h--hhhhccceEEEecCCcchh
Confidence 6899999999999999998876654 677666433322211101112222222 1 2346789999987 3332
Q ss_pred --HHHHHHhCCCCEEEEeccc
Q 028418 175 --ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 --ll~AA~~aGVkriV~vSS~ 193 (209)
+...+.++|. ++|=.|+.
T Consensus 78 ~~~~~~~~~~g~-~VID~Ss~ 97 (144)
T d2hjsa1 78 RAHAERARAAGC-SVIDLSGA 97 (144)
T ss_dssp HHHHHHHHHTTC-EEEETTCT
T ss_pred hhhccccccCCc-eEEeechh
Confidence 5555667774 56666654
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.35 E-value=5.7e-05 Score=59.23 Aligned_cols=90 Identities=14% Similarity=0.089 Sum_probs=52.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEe-CCc-ch----hhh---cCCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVK-DKR-NA----MES---FGTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR-~~~-~a----~~~---~~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
|++|.|.||||++|+.+++.|..+ ..++..+.- ... .+ ... +........-+..+ ......++|.||
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dvvf 77 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSD---VRDFSADVDVVF 77 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESC---GGGTCTTCCEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchh---hhhhhcccceee
Confidence 578999999999999999988886 677776653 211 11 111 00001111111111 233467899999
Q ss_pred Ec-ChhH---HHHHHHhCCCCEEEEecc
Q 028418 169 CP-SEGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 169 h~-a~g~---ll~AA~~aGVkriV~vSS 192 (209)
.+ ..+. ++....+.+ .++|=+|+
T Consensus 78 ~alp~~~s~~~~~~~~~~~-~~vIDlSa 104 (179)
T d2g17a1 78 LATAHEVSHDLAPQFLQAG-CVVFDLSG 104 (179)
T ss_dssp ECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred ccccchhHHHHhhhhhhcC-ceeecccc
Confidence 88 3332 555556666 44666665
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.00019 Score=54.82 Aligned_cols=71 Identities=14% Similarity=0.158 Sum_probs=55.8
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
-.+.++|||.|+ |-||...++.+...|.+++++++++++... .++ .+. ..|..+++......+++|.||.+
T Consensus 28 ~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lG--ad~-~i~~~~~~~~~~~~~~~D~vid~ 100 (168)
T d1uufa2 28 AGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALG--ADE-VVNSRNADEMAAHLKSFDFILNT 100 (168)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHT--CSE-EEETTCHHHHHTTTTCEEEEEEC
T ss_pred CCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccC--CcE-EEECchhhHHHHhcCCCceeeee
Confidence 456789999986 899999998888999999999987776432 233 222 24678888888888999999987
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.28 E-value=0.0002 Score=53.75 Aligned_cols=42 Identities=12% Similarity=0.188 Sum_probs=37.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
+..+++|+|.|+.|.+|+.+++.|.++||+|.+..|++....
T Consensus 6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~ 47 (152)
T d2pv7a2 6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA 47 (152)
T ss_dssp CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence 345779999999999999999999999999999999886554
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.28 E-value=0.0007 Score=51.88 Aligned_cols=87 Identities=10% Similarity=0.189 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh---------hhcCCceEEEEccCCCHHHHHHhhcCCcE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM---------ESFGTYVESMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~---------~~~~~~vevv~GDl~D~~sL~~AL~GvDa 166 (209)
.+++|.|.|+ |++|+.++..|..++ .+|+.+++++++++ ..+.....++.+|+ ++++++|.
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adi 75 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADL 75 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccE
Confidence 3679999996 999999999999887 68999998875432 11223345666664 46899999
Q ss_pred EEEcC-----hh---------------HHHHHHHhCCCCEEEEecc
Q 028418 167 IICPS-----EG---------------FISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 167 VIh~a-----~g---------------~ll~AA~~aGVkriV~vSS 192 (209)
||.++ .+ .+++...+.+.+-+|.+-|
T Consensus 76 vvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 99882 11 1455666777777776655
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.23 E-value=0.00021 Score=53.91 Aligned_cols=63 Identities=8% Similarity=0.014 Sum_probs=46.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.|.| .|.+|+.+++.|+++||+|.+..|++++.......++.+. ++..++++.+|.||.+
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~e~~~~~diIi~~ 63 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-------ETSEEDVYSCPVVISA 63 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-------ECCHHHHHTSSEEEEC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccccc-------ccHHHHHhhcCeEEEE
Confidence 5788995 5999999999999999999998877765543322222221 1245788999999987
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.19 E-value=0.00069 Score=51.22 Aligned_cols=93 Identities=15% Similarity=0.090 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh--hcCCceEEEE-ccCCCHHHHHHhh-----cCCcEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME--SFGTYVESMA-GDASNKKFLKTAL-----RGVRSII 168 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~--~~~~~vevv~-GDl~D~~sL~~AL-----~GvDaVI 168 (209)
.+.++|||+| +|.||...++.+...|.+|.++++++++... .++....++. -.-.+...+.+.+ .++|.||
T Consensus 25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vi 103 (170)
T d1e3ja2 25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI 103 (170)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceee
Confidence 4667999997 6999999999999999999999998876542 2333322221 1223444444443 4789999
Q ss_pred EcC--hhH---HHHHHHhCCCCEEEEecc
Q 028418 169 CPS--EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 169 h~a--~g~---ll~AA~~aGVkriV~vSS 192 (209)
.+. ..+ .++.++.. .++|+++.
T Consensus 104 d~~g~~~~~~~a~~~~~~~--G~iv~~G~ 130 (170)
T d1e3ja2 104 DCSGNEKCITIGINITRTG--GTLMLVGM 130 (170)
T ss_dssp ECSCCHHHHHHHHHHSCTT--CEEEECSC
T ss_pred ecCCChHHHHHHHHHHhcC--CceEEEec
Confidence 882 222 34444444 47777763
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.15 E-value=0.00017 Score=57.48 Aligned_cols=91 Identities=14% Similarity=0.105 Sum_probs=51.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-Chh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG 173 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g 173 (209)
|.+|.|.||||++|+.+++.|.+. ..++..+..+...-+ ...+....-......+++ +...++|.||.+ ..+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~---~~~~~~dvvf~a~p~~ 77 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPE---KVSKNCDVLFTALPAG 77 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHH---HHHHHCSEEEECCSTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHh---HhccccceEEEccccH
Confidence 568999999999999999988764 467777763332211 111111111112223443 345689999988 334
Q ss_pred HHHHHHH-hCCCCEEEEeccc
Q 028418 174 FISNAGS-LKGVQHVILLSQR 193 (209)
Q Consensus 174 ~ll~AA~-~aGVkriV~vSS~ 193 (209)
.-.+.+. ..+ .++|=+|+-
T Consensus 78 ~s~~~~~~~~~-~~VIDlSad 97 (176)
T d1vkna1 78 ASYDLVRELKG-VKIIDLGAD 97 (176)
T ss_dssp HHHHHHTTCCS-CEEEESSST
T ss_pred HHHHHHHhhcc-ceEEecCcc
Confidence 3222222 234 356655653
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.15 E-value=0.00023 Score=56.13 Aligned_cols=93 Identities=13% Similarity=0.063 Sum_probs=56.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCH-HHHHHhh--cCCcEEEEcChh-
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSEG- 173 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~-~sL~~AL--~GvDaVIh~a~g- 173 (209)
+.++|||+||+|-+|...++.+...|.+|.+.++++++.......+.+.+. |..+. +...+.+ +|+|+||-+.-+
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi-~~~~~~~~~~~~~~~~gvD~vid~vgg~ 109 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVL-AREDVMAERIRPLDKQRWAAAVDPVGGR 109 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEE-ECC---------CCSCCEEEEEECSTTT
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceee-ecchhHHHHHHHhhccCcCEEEEcCCch
Confidence 356899999999999999998889999999999988776433222232221 22221 1222233 478999987222
Q ss_pred H---HHHHHHhCCCCEEEEeccc
Q 028418 174 F---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 ~---ll~AA~~aGVkriV~vSS~ 193 (209)
+ .++..+.. .|+|.+...
T Consensus 110 ~~~~~l~~l~~~--Griv~~G~~ 130 (176)
T d1xa0a2 110 TLATVLSRMRYG--GAVAVSGLT 130 (176)
T ss_dssp THHHHHHTEEEE--EEEEECSCC
T ss_pred hHHHHHHHhCCC--ceEEEeecc
Confidence 2 22222222 467766654
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.00022 Score=49.86 Aligned_cols=41 Identities=12% Similarity=0.158 Sum_probs=36.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
.+.++|||+||+|-+|...++.+...|++|.+.++++++.+
T Consensus 30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~ 70 (77)
T d1o8ca2 30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE 70 (77)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence 35668999999999999999988999999999999887754
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.08 E-value=0.0027 Score=48.56 Aligned_cols=67 Identities=9% Similarity=0.087 Sum_probs=46.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcc--hh----h------hcCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--AM----E------SFGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~--a~----~------~~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
|+|.|+||+|.+|+.++..|..++ .++..+++++.. ++ . .....+++...--.| .++++++|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d----~~~l~~aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN----LRIIDESD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC----GGGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch----HHHhccce
Confidence 689999999999999999998888 488888877532 11 1 112234443222222 35899999
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.||.+
T Consensus 77 vVVit 81 (145)
T d1hyea1 77 VVIIT 81 (145)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99998
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.05 E-value=0.00019 Score=55.98 Aligned_cols=69 Identities=14% Similarity=0.158 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-----cCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-----~GvDaVIh~ 170 (209)
..+|||+||+|-+|...++.....|.+|.+.+|++++.......+++.+. |. .+...+.+ +++|.||-+
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi-~~--~~~~~~~~~~~~~~gvd~vid~ 97 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVI-SR--EDVYDGTLKALSKQQWQGAVDP 97 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEE-EH--HHHCSSCCCSSCCCCEEEEEES
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceE-ec--cchhchhhhcccCCCceEEEec
Confidence 44799999999999999988889999999999998876533222233321 21 11111222 478988877
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.01 E-value=0.00019 Score=54.78 Aligned_cols=63 Identities=13% Similarity=0.026 Sum_probs=45.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.|.| .|.+|+.+++.|+++||+|.+..|++++.......+... . .+..++++.+|.||.+
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~----~---~~~~e~~~~~d~ii~~ 63 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----A---STAKAIAEQCDVIITM 63 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----C---SSHHHHHHHCSEEEEC
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh----c---ccHHHHHhCCCeEEEE
Confidence 5788886 599999999999999999999999988765443322322 1 1234556667777665
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.0027 Score=48.14 Aligned_cols=92 Identities=12% Similarity=0.039 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHhh-----cCCcEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTAL-----RGVRSII 168 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~AL-----~GvDaVI 168 (209)
.+.++|||.|+ |.+|...+..+...|. +|.+..+++++... .++. -+++.-+-.++....+.+ .++|.||
T Consensus 25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga-~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi 102 (171)
T d1pl8a2 25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-DLVLQISKESPQEIARKVEGQLGCKPEVTI 102 (171)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-SEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCC-cccccccccccccccccccccCCCCceEEE
Confidence 46779999987 9999999999999998 68888888876542 2332 234444556666555554 3789999
Q ss_pred EcC--hhH---HHHHHHhCCCCEEEEecc
Q 028418 169 CPS--EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 169 h~a--~g~---ll~AA~~aGVkriV~vSS 192 (209)
-+. ..+ .++.++.. .++|+++.
T Consensus 103 d~~G~~~~~~~a~~~~~~g--G~iv~~G~ 129 (171)
T d1pl8a2 103 ECTGAEASIQAGIYATRSG--GTLVLVGL 129 (171)
T ss_dssp ECSCCHHHHHHHHHHSCTT--CEEEECSC
T ss_pred eccCCchhHHHHHHHhcCC--CEEEEEec
Confidence 872 222 23333333 47777663
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=96.93 E-value=0.00017 Score=55.92 Aligned_cols=69 Identities=17% Similarity=0.144 Sum_probs=53.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCC-ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~-~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
....++|||.|| |-+|+.+++.|..+|. ++.+..|+.+++..+... +.++ .+-+.+.+++..+|.||.+
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-----~~~~~~~~~l~~~Divi~a 91 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-----VRFDELVDHLARSDVVVSA 91 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-----CCGGGHHHHHHTCSEEEEC
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-----ccchhHHHHhccCCEEEEe
Confidence 456779999998 9999999999999997 588888888776543211 1222 3446788899999999998
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=96.85 E-value=0.0005 Score=55.96 Aligned_cols=38 Identities=13% Similarity=-0.010 Sum_probs=34.2
Q ss_pred cCCCCeEEEEcCCC--HHHHHHHHHHHHCCCcEEEEEeCC
Q 028418 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK 133 (209)
Q Consensus 96 ~~~~~~ILVTGATG--fIG~~VV~~Ll~~G~~VraLvR~~ 133 (209)
+...+++|||||+| -||+.++++|.++|.+|.+..|++
T Consensus 5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~ 44 (297)
T d1d7oa_ 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP 44 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence 46678999999988 799999999999999999888864
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.82 E-value=0.0014 Score=50.20 Aligned_cols=91 Identities=10% Similarity=0.039 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh--hcCCceEEEEccCCCHHHHHHh----h--cCCcEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTA----L--RGVRSI 167 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~--~~~~~vevv~GDl~D~~sL~~A----L--~GvDaV 167 (209)
.+.++|||+|| |-||...++.+...|. +|.+..+++++... .++.. .++.-.=.+.....+. . .|+|.|
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~~i~~~~~~~g~Dvv 104 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD-LTLNRRETSVEERRKAIMDITHGRGADFI 104 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS-EEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCCEEEEECC-Cccchhheecccccccccccccccccccccccccccce-EEEeccccchHHHHHHHHHhhCCCCceEE
Confidence 46789999997 9999999999999997 78999988876542 23321 2332222333333222 2 378999
Q ss_pred EEcC--hhH---HHHHHHhCCCCEEEEec
Q 028418 168 ICPS--EGF---ISNAGSLKGVQHVILLS 191 (209)
Q Consensus 168 Ih~a--~g~---ll~AA~~aGVkriV~vS 191 (209)
|-+. ..+ .++.++.. .++|++.
T Consensus 105 id~vG~~~~~~~a~~~l~~~--G~iv~~G 131 (182)
T d1vj0a2 105 LEATGDSRALLEGSELLRRG--GFYSVAG 131 (182)
T ss_dssp EECSSCTTHHHHHHHHEEEE--EEEEECC
T ss_pred eecCCchhHHHHHHHHhcCC--CEEEEEe
Confidence 9872 222 23333332 4666664
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.79 E-value=0.0013 Score=50.11 Aligned_cols=67 Identities=15% Similarity=0.198 Sum_probs=49.2
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh----h------hcCCceEEEEccCCCHHHHHHhhcC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----E------SFGTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~----~------~~~~~vevv~GDl~D~~sL~~AL~G 163 (209)
+..+.+|.|+|| |++|++++..|+.++. +++.++++++++. . .....+.+..+|+ +++++
T Consensus 3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~d 74 (148)
T d1ldna1 3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRD 74 (148)
T ss_dssp TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTT
T ss_pred CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhcc
Confidence 345679999997 9999999999998875 7888888776532 1 1123345555553 57999
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.||.+
T Consensus 75 aDvvvit 81 (148)
T d1ldna1 75 ADLVVIC 81 (148)
T ss_dssp CSEEEEC
T ss_pred ceeEEEe
Confidence 9999987
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.77 E-value=0.0074 Score=43.14 Aligned_cols=88 Identities=10% Similarity=0.072 Sum_probs=64.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh-h-cCCceEEEEccCCCHHHHHHhhcCCcEEEEcC-h
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-S-FGTYVESMAGDASNKKFLKTALRGVRSIICPS-E 172 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~-~-~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a-~ 172 (209)
+...++|||.| .|.+|..-++.|++.|.+|++......+... . ...++++....+.+.+ +.+++.|+.+. .
T Consensus 9 ~l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~d-----l~~~~lv~~at~d 82 (113)
T d1pjqa1 9 QLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETL-----LDSCWLAIAATDD 82 (113)
T ss_dssp CCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGG-----GTTCSEEEECCSC
T ss_pred EeCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHH-----hCCCcEEeecCCC
Confidence 55678999998 4889999999999999999999876654432 1 2346888888877543 78899999872 1
Q ss_pred ----hHHHHHHHhCCCCEEEEec
Q 028418 173 ----GFISNAGSLKGVQHVILLS 191 (209)
Q Consensus 173 ----g~ll~AA~~aGVkriV~vS 191 (209)
..+...|++.|+ +|.+.
T Consensus 83 ~~~n~~i~~~a~~~~i--lVNv~ 103 (113)
T d1pjqa1 83 DTVNQRVSDAAESRRI--FCNVV 103 (113)
T ss_dssp HHHHHHHHHHHHHTTC--EEEET
T ss_pred HHHHHHHHHHHHHcCC--EEEeC
Confidence 127778888775 45543
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.75 E-value=0.00092 Score=51.16 Aligned_cols=86 Identities=20% Similarity=0.194 Sum_probs=46.9
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCc---EEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhH-
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP-SEGF- 174 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~---VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~- 174 (209)
+|.|.||||++|+.+++.|.++.++ +..+. +.+.+..... ..-....-+..+ ..+.++|.+|.+ ..+.
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~-s~~s~G~~~~~~~~~~~~~~~~~-----~~~~~~d~~f~~~~~~~s 76 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLA-SARSAGKSLKFKDQDITIEETTE-----TAFEGVDIALFSAGSSTS 76 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEE-CGGGTTCEEEETTEEEEEEECCT-----TTTTTCSEEEECSCHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEec-ccccccccccccCCcccccccch-----hhhhhhhhhhhccCccch
Confidence 7999999999999999988776543 33333 2222211110 111122222222 345678988887 3332
Q ss_pred --HHHHHHhCCCCEEEEeccc
Q 028418 175 --ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 175 --ll~AA~~aGVkriV~vSS~ 193 (209)
++..+.+.|+ ++|=+|+.
T Consensus 77 ~~~~~~~~~~~~-~VIDlSsd 96 (154)
T d2gz1a1 77 AKYAPYAVKAGV-VVVDNTSY 96 (154)
T ss_dssp HHHHHHHHHTTC-EEEECSST
T ss_pred hhHHhhhccccc-eehhcChh
Confidence 4444455563 45555553
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.75 E-value=0.0013 Score=49.44 Aligned_cols=62 Identities=16% Similarity=0.095 Sum_probs=43.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.+.|+ |.+|+++++.|++.| ++|.+..|++++...+.. .++... -|. ++++.+|.||.+
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~-------~~v~~~Div~la 64 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATL-------PELHSDDVLILA 64 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSC-------CCCCTTSEEEEC
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-ccc-------ccccccceEEEe
Confidence 57999977 999999999999887 999999999876543321 124332 121 135667777766
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.73 E-value=0.0046 Score=46.79 Aligned_cols=64 Identities=17% Similarity=0.289 Sum_probs=43.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh----hh-----cCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ES-----FGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~----~~-----~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
+++|.|+|| |++|+.++-.|+.++. +++.++++++++. .+ +.....+..+| .++++++|.|
T Consensus 1 r~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adiv 72 (142)
T d1y6ja1 1 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVI 72 (142)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceE
Confidence 468999997 9999999999998875 7999998876542 11 11223333333 3579999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
+.+
T Consensus 73 vit 75 (142)
T d1y6ja1 73 VVT 75 (142)
T ss_dssp EEC
T ss_pred EEe
Confidence 987
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.72 E-value=0.0028 Score=47.57 Aligned_cols=67 Identities=12% Similarity=-0.015 Sum_probs=47.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-----CCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-----GVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-----GvDaVIh~ 170 (209)
|+|.|.|++|..|+.|.+.+.++++++.+..-.... .... ..+ |.-|++.|+.+.+.++ ++-.|+-+
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-~~~~--~~D-VvIDFS~p~~~~~~l~~~~~~~~p~ViGT 72 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-EELD--SPD-VVIDFSSPEALPKTVDLCKKYRAGLVLGT 72 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-EECS--CCS-EEEECSCGGGHHHHHHHHHHHTCEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-HHhc--cCC-EEEEecCHHHHHHHHHHHHhcCCCEEEEc
Confidence 589999999999999999899999998876532211 1111 123 3569999988777664 55555554
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.61 E-value=0.00093 Score=50.59 Aligned_cols=93 Identities=11% Similarity=0.133 Sum_probs=56.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh--hcCCceEEEEccCCCH-HHHHHhh--cCCcEEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAGDASNK-KFLKTAL--RGVRSIIC 169 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~--~~~~~vevv~GDl~D~-~sL~~AL--~GvDaVIh 169 (209)
..+.++|||+|++|-+|...+..+...|. +|.+..+++++... .++.. +++..+-.|+ +.+.+.. .++|.||.
T Consensus 25 ~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~vid 103 (170)
T d1jvba2 25 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD-YVINASMQDPLAEIRRITESKGVDAVID 103 (170)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCc-eeeccCCcCHHHHHHHHhhcccchhhhc
Confidence 45677999999999999999988888884 77788777765432 23321 3343333332 2223332 36899998
Q ss_pred cC-hhHH----HHHHHhCCCCEEEEec
Q 028418 170 PS-EGFI----SNAGSLKGVQHVILLS 191 (209)
Q Consensus 170 ~a-~g~l----l~AA~~aGVkriV~vS 191 (209)
+. .... +++++.. .++|.++
T Consensus 104 ~~g~~~~~~~a~~~l~~~--G~iv~~G 128 (170)
T d1jvba2 104 LNNSEKTLSVYPKALAKQ--GKYVMVG 128 (170)
T ss_dssp SCCCHHHHTTGGGGEEEE--EEEEECC
T ss_pred ccccchHHHhhhhhcccC--CEEEEec
Confidence 83 2222 2233333 4677665
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.56 E-value=0.0032 Score=47.25 Aligned_cols=72 Identities=8% Similarity=0.113 Sum_probs=48.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce-EEEEccCCCH---HHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNK---KFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v-evv~GDl~D~---~sL~~AL~GvDaVIh~ 170 (209)
..+.++|||.|+ |.||...+..+...|.+|.++++++++......-+. +++ |..+. +.+.+...|.+.+|.+
T Consensus 25 ~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i--~~~~~~~~~~~~~~~~g~~~~i~~ 100 (166)
T d1llua2 25 ARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTV--NARQEDPVEAIQRDIGGAHGVLVT 100 (166)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEE--ETTTSCHHHHHHHHHSSEEEEEEC
T ss_pred CCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccc--cccchhHHHHHHHhhcCCcccccc
Confidence 356789999986 999999999888999999999998876543222222 333 33333 3344445666666655
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.54 E-value=0.0012 Score=50.29 Aligned_cols=39 Identities=5% Similarity=-0.010 Sum_probs=33.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhh
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME 138 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~ 138 (209)
|++|.|.| .|.+|+.+++.|+++||+|.+..|++++...
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~ 39 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDG 39 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhh
Confidence 46788985 6999999999999999999999998876543
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.50 E-value=0.0062 Score=47.02 Aligned_cols=73 Identities=8% Similarity=0.032 Sum_probs=57.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhh------cC--CceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES------FG--TYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~------~~--~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
...++|||.|+ |..|+.++..|...|. ++....|++++.... +. ....+...++.+.+.+.+.+..+|.|
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 45679999998 7789999999999986 677778887654321 11 12346678899999999999999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|.+
T Consensus 95 IN~ 97 (182)
T d1vi2a1 95 TNG 97 (182)
T ss_dssp EEC
T ss_pred ccc
Confidence 988
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.37 E-value=0.0059 Score=45.76 Aligned_cols=64 Identities=9% Similarity=0.005 Sum_probs=46.2
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhh----------hcCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~----------~~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
|+|.|+|| |.+|+.++..|+.++ .+++.+++++.++.. .+.....+... .| .++++++|.|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~----~~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND----YADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CC----HHHhcCCeEE
Confidence 58999997 999999999999887 589999888865421 11223344322 22 3578999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
+.+
T Consensus 74 vit 76 (142)
T d1guza1 74 IIT 76 (142)
T ss_dssp EEC
T ss_pred EEE
Confidence 988
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.35 E-value=0.0042 Score=47.43 Aligned_cols=66 Identities=15% Similarity=0.190 Sum_probs=42.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC---CCcEEEEEeCCcch---hhhcC----CceEEEEccCCCHHHHHHhhcCCcEEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK---RTRIKALVKDKRNA---MESFG----TYVESMAGDASNKKFLKTALRGVRSIIC 169 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~---G~~VraLvR~~~~a---~~~~~----~~vevv~GDl~D~~sL~~AL~GvDaVIh 169 (209)
|+|.|+||+|++|++++..|..+ ..+++.++.++... ..+.. .....+. .-.+ .++++++|.||.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~-~~~~----~~~~~~aDvvvi 75 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFS-GEDA----TPALEGADVVLI 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEEC-SSCC----HHHHTTCSEEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEE-cCCC----ccccCCCCEEEE
Confidence 68999999999999999877532 47888887654221 11111 1122221 1122 347999999999
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 76 t 76 (145)
T d2cmda1 76 S 76 (145)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.31 E-value=0.0094 Score=45.97 Aligned_cols=94 Identities=13% Similarity=0.092 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchh--hhcCCceEEEEccCCC--HHHHHHhh--cCCcEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM--ESFGTYVESMAGDASN--KKFLKTAL--RGVRSIIC 169 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~--~~~~~~vevv~GDl~D--~~sL~~AL--~GvDaVIh 169 (209)
.+.++|||.|+ |.||...+..+...|.. |.+..+++++.. +.++. .+++...-.| ...+.+.+ .|+|+||-
T Consensus 27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga-~~~i~~~~~~~~~~~~~~~~~~~G~d~vie 104 (174)
T d1e3ia2 27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA-TDCLNPRELDKPVQDVITELTAGGVDYSLD 104 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC-SEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCC-CcccCCccchhhhhhhHhhhhcCCCcEEEE
Confidence 46779999985 99999999999999974 667777776643 23332 2333222122 22233333 58999998
Q ss_pred c-C-hhHHHHHHHh--CCCCEEEEecc
Q 028418 170 P-S-EGFISNAGSL--KGVQHVILLSQ 192 (209)
Q Consensus 170 ~-a-~g~ll~AA~~--aGVkriV~vSS 192 (209)
+ . ..++-++..- .+-.++|.+..
T Consensus 105 ~~G~~~~~~~a~~~~~~g~G~~v~vG~ 131 (174)
T d1e3ia2 105 CAGTAQTLKAAVDCTVLGWGSCTVVGA 131 (174)
T ss_dssp SSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred ecccchHHHHHHHHhhcCCeEEEecCC
Confidence 8 2 3333333322 22247777653
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.30 E-value=0.0018 Score=50.71 Aligned_cols=92 Identities=9% Similarity=-0.041 Sum_probs=57.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEcChh-H--
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEG-F-- 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~a~g-~-- 174 (209)
.+|||+||+|-+|...++.+...|.+|.+++|++++.......+.+.+. |..+.+. .+.+. ..|.||.+.-+ +
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~vi-~~~~~~~-~~~l~~~~~~~vvD~Vgg~~~~ 110 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVL-PRDEFAE-SRPLEKQVWAGAIDTVGDKVLA 110 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEEE-EGGGSSS-CCSSCCCCEEEEEESSCHHHHH
T ss_pred CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcccccc-ccccHHH-HHHHHhhcCCeeEEEcchHHHH
Confidence 4899999999999999998899999999999998876533222343332 3333222 23332 34777776322 2
Q ss_pred -HHHHHHhCCCCEEEEeccccc
Q 028418 175 -ISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 175 -ll~AA~~aGVkriV~vSS~~V 195 (209)
.++..+.. .|||.++..+-
T Consensus 111 ~~l~~l~~~--Griv~~G~~~~ 130 (177)
T d1o89a2 111 KVLAQMNYG--GCVAACGLAGG 130 (177)
T ss_dssp HHHHTEEEE--EEEEECCCTTC
T ss_pred HHHHHhccc--cceEeecccCC
Confidence 23333333 47777765543
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=96.28 E-value=0.0072 Score=46.16 Aligned_cols=41 Identities=12% Similarity=0.105 Sum_probs=35.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
....++|||.|| |..++.++..|.+.|.+|.++.|+++++.
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~ 55 (170)
T d1nyta1 15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAE 55 (170)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHH
T ss_pred CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHH
Confidence 345679999997 77899999999999999999999988765
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.26 E-value=0.0064 Score=46.88 Aligned_cols=96 Identities=13% Similarity=0.101 Sum_probs=62.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhh--hcCCceEEEE-ccCCC-HHHHHHhh--cCCcEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAME--SFGTYVESMA-GDASN-KKFLKTAL--RGVRSII 168 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~--~~~~~vevv~-GDl~D-~~sL~~AL--~GvDaVI 168 (209)
-.+.++|+|+|+ |-+|...+..+...| .+|.++++++++.+. .++.. +++. -|-.+ ...+.+.. .|+|.||
T Consensus 27 ~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~-~~in~~~~~~~~~~~~~~~~g~G~d~vi 104 (176)
T d1d1ta2 27 VKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGAT-ECISPKDSTKPISEVLSEMTGNNVGYTF 104 (176)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCS-EEECGGGCSSCHHHHHHHHHTSCCCEEE
T ss_pred CCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCc-EEECccccchHHHHHHHHhccccceEEE
Confidence 356779999986 999999999999999 579999998887643 23322 2221 22222 33344444 5799999
Q ss_pred Ec-C-hhHHHHHHHhC--CCCEEEEeccc
Q 028418 169 CP-S-EGFISNAGSLK--GVQHVILLSQR 193 (209)
Q Consensus 169 h~-a-~g~ll~AA~~a--GVkriV~vSS~ 193 (209)
-+ . ..++.+++... +-.++|+++..
T Consensus 105 ~~~g~~~~~~~a~~~~~~~~G~~v~vG~~ 133 (176)
T d1d1ta2 105 EVIGHLETMIDALASCHMNYGTSVVVGVP 133 (176)
T ss_dssp ECSCCHHHHHHHHTTSCTTTCEEEECSCC
T ss_pred EeCCchHHHHHHHHHhhcCCeEEEEEEcc
Confidence 87 2 33444444332 33588887643
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.25 E-value=0.0065 Score=46.25 Aligned_cols=63 Identities=8% Similarity=0.184 Sum_probs=45.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCC--cchh----h-----hcCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK--RNAM----E-----SFGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~--~~a~----~-----~~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
+|.|+||+|++|+.++..|+.++. ++..++.+. ..+. . .+.....+..+|. +.++|+|.|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~-------~~~~~aDiV 74 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY-------EDTAGSDVV 74 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG-------GGGTTCSEE
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH-------HHhhhcCEE
Confidence 799999999999999999999875 677776433 2221 1 1334455555553 358999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
+.+
T Consensus 75 vit 77 (142)
T d1o6za1 75 VIT 77 (142)
T ss_dssp EEC
T ss_pred EEe
Confidence 988
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.22 E-value=0.0033 Score=47.76 Aligned_cols=74 Identities=15% Similarity=0.062 Sum_probs=47.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCCceE-EE-EccCCC-HHHHHHhh--cCCcEEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVE-SM-AGDASN-KKFLKTAL--RGVRSIIC 169 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~~ve-vv-~GDl~D-~~sL~~AL--~GvDaVIh 169 (209)
-.+.++|||.|| |-+|...+.++...| .+|.+..+++++.......+.+ .+ ..+-.| ...+.+.. .|+|.||-
T Consensus 26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid 104 (176)
T d2jhfa2 26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFE 104 (176)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEe
Confidence 456789999999 558989998898887 5788888888765433222232 22 223222 22333333 48999998
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 105 ~ 105 (176)
T d2jhfa2 105 V 105 (176)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=96.21 E-value=0.0086 Score=46.93 Aligned_cols=65 Identities=14% Similarity=0.075 Sum_probs=40.8
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCCcc--hh----hhcC---Cce-EEEEccCCCHHHHHHhhcC
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AM----ESFG---TYV-ESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~~~--a~----~~~~---~~v-evv~GDl~D~~sL~~AL~G 163 (209)
+|.||||+|.||++++..|..... .++.+..+... +. .... +.. .++..+ ...+++++
T Consensus 26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~-----~~~~~~~~ 100 (175)
T d7mdha1 26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGI-----DPYEVFED 100 (175)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES-----CHHHHTTT
T ss_pred EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccc-----cchhhccC
Confidence 799999999999999998876431 44555444321 11 1111 111 222222 24689999
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.||.+
T Consensus 101 aDvVvi~ 107 (175)
T d7mdha1 101 VDWALLI 107 (175)
T ss_dssp CSEEEEC
T ss_pred CceEEEe
Confidence 9999998
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.18 E-value=0.00078 Score=52.96 Aligned_cols=71 Identities=14% Similarity=0.192 Sum_probs=41.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+.+|.|.||||++|+.+++.|.+. ..++..+.-+..... ...+ .. ....+..........+.++|.||.+
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~Dvvf~a 78 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFP-HL-ITQDLPNLVAVKDADFSNVDAVFCC 78 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCG-GG-TTSCCCCCBCGGGCCGGGCSEEEEC
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccc-cc-cccccccchhhhhhhhcccceeeec
Confidence 4668999999999999999988764 356666652222111 1111 00 0011122222334456789999987
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.17 E-value=0.0045 Score=46.05 Aligned_cols=74 Identities=11% Similarity=0.119 Sum_probs=50.9
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCC-C-HHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-N-KKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~-D-~~sL~~AL~GvDaVIh~ 170 (209)
..|.++|||.|+ |-||...++.+...|.+|.+.++++++......-+++.+...-. | ...+.+...+.+.+|.+
T Consensus 25 ~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 100 (168)
T d1rjwa2 25 AKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVT 100 (168)
T ss_dssp CCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEee
Confidence 346789999976 88999999999999999999998887654322223444432222 2 34466666787777765
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.15 E-value=0.0022 Score=49.27 Aligned_cols=70 Identities=16% Similarity=0.155 Sum_probs=50.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCce--EEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV--ESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~v--evv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+..|.|.|- |.+|..+++.|+++||+|.+..|++++...+...+. ....+ ....+.+.+++..+|.+|.+
T Consensus 2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~-a~~~~~~~~~~~~~~~ii~~ 73 (176)
T d2pgda2 2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLG-AHSLEEMVSKLKKPRRIILL 73 (176)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEE-CSSHHHHHHHBCSSCEEEEC
T ss_pred CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccc-hhhhhhhhhhhcccceEEEe
Confidence 346788885 999999999999999999999999987654321111 00111 45667778888888888766
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.13 E-value=0.0067 Score=45.96 Aligned_cols=69 Identities=12% Similarity=0.146 Sum_probs=46.9
Q ss_pred eEEEEcCCCHHHHHHHHHHHH-CCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh-----cCCcEEEEc
Q 028418 101 AVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICP 170 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~-~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL-----~GvDaVIh~ 170 (209)
+|.|+||+|..|+.|++.+.+ .++++.+..-..+........+.+ +.-|++.|+.+.+.+ .|+-.|+-+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~D-vvIDFS~p~~~~~~~~~~~~~~~~~ViGT 75 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGT 75 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCS-EEEECCCTTTHHHHHHHHHHTTCEEEECC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCC-EEEEcccHHHHHHHHHHHHhcCCCEEEec
Confidence 689999999999999998765 567877766333333222222333 456899988776665 366666654
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.09 E-value=0.001 Score=51.74 Aligned_cols=70 Identities=10% Similarity=0.063 Sum_probs=44.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchhh---hcCCceEEEEccCCCHH---HHHHhh-cCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAME---SFGTYVESMAGDASNKK---FLKTAL-RGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~~---~~~~~vevv~GDl~D~~---sL~~AL-~GvDaVIh~ 170 (209)
.++|||+||+|-||+..++.+...|.++++.+ +++++... .++. ..++ |..+++ .+.++. +|+|+||-+
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga-d~vi--~~~~~~~~~~~~~~~~~GvDvv~D~ 107 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF-DAAV--NYKTGNVAEQLREACPGGVDVYFDN 107 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC-SEEE--ETTSSCHHHHHHHHCTTCEEEEEES
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc-eEEe--eccchhHHHHHHHHhccCceEEEec
Confidence 46899999999999999998888998766654 44333321 2232 2233 444433 233332 489999988
Q ss_pred C
Q 028418 171 S 171 (209)
Q Consensus 171 a 171 (209)
.
T Consensus 108 v 108 (187)
T d1vj1a2 108 V 108 (187)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.05 E-value=0.0064 Score=46.95 Aligned_cols=70 Identities=9% Similarity=0.050 Sum_probs=48.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc--hhhhcC----C--ceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFG----T--YVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~--a~~~~~----~--~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.|.|| |..|..++..|.++|++|+...|+.++ ...... + ....-..++.-...+.++++++|.||.+
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a 78 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence 68999986 999999999999999999999985432 211100 0 0111111223356789999999999987
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.00 E-value=0.0066 Score=45.65 Aligned_cols=63 Identities=21% Similarity=0.307 Sum_probs=46.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhh---------hcCCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~---------~~~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
++|.|.|| |.+|+.++..|+.++ .+++.++++++++.. .+.....+..+| .++++|+|.|+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-------YADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-------GGGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc-------HHHhcCCCEEE
Confidence 58999997 999999998888776 578888877755421 122334555444 35799999999
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
.+
T Consensus 73 it 74 (140)
T d1a5za1 73 VA 74 (140)
T ss_dssp EC
T ss_pred Ee
Confidence 88
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=95.98 E-value=0.0053 Score=47.27 Aligned_cols=73 Identities=16% Similarity=0.188 Sum_probs=49.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh--hcCCceEEEEc-cCCCHHHHHHhh--cCCcEEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME--SFGTYVESMAG-DASNKKFLKTAL--RGVRSIIC 169 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~--~~~~~vevv~G-Dl~D~~sL~~AL--~GvDaVIh 169 (209)
-.+.++|||.|+ |-||...++.+...|. +|.+.++++++... .++. .+++.- |-...+.+.+.. +|+|+||-
T Consensus 25 ~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa-~~~i~~~~~~~~~~v~~~t~g~G~D~vid 102 (174)
T d1jqba2 25 IEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA-TDILNYKNGHIEDQVMKLTNGKGVDRVIM 102 (174)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTC-SEEECGGGSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCc-cccccccchhHHHHHHHHhhccCcceEEE
Confidence 456789999986 9999999988888996 68888887765432 2332 233322 212234455555 36999998
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 103 ~ 103 (174)
T d1jqba2 103 A 103 (174)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=95.98 E-value=0.0068 Score=46.15 Aligned_cols=63 Identities=13% Similarity=0.151 Sum_probs=45.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchh----h------hcCCceEEEEccCCCHHHHHHhhcCCcEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM----E------SFGTYVESMAGDASNKKFLKTALRGVRSI 167 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~----~------~~~~~vevv~GDl~D~~sL~~AL~GvDaV 167 (209)
++|.|+|| |++|+.++..|+.+| .+++.+++++.++. . .+.....+..+| .++++++|.|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d-------~~~l~~adiV 73 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND-------WAALADADVV 73 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC-------GGGGTTCSEE
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC-------HHHhccccEE
Confidence 68999995 999999999999877 47888877776532 1 122334555554 2568999999
Q ss_pred EEc
Q 028418 168 ICP 170 (209)
Q Consensus 168 Ih~ 170 (209)
|.+
T Consensus 74 Vit 76 (146)
T d1hyha1 74 IST 76 (146)
T ss_dssp EEC
T ss_pred EEe
Confidence 987
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=95.97 E-value=0.011 Score=45.85 Aligned_cols=68 Identities=10% Similarity=0.108 Sum_probs=48.2
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh----hh-----c-CCceEEEEccCCCHHHHHHhhc
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----ES-----F-GTYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~----~~-----~-~~~vevv~GDl~D~~sL~~AL~ 162 (209)
...++++|.|.|+ |.+|+.++..|..+|. ++..++++++.+. .+ + ........+| .+.++
T Consensus 16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d-------~~~~~ 87 (160)
T d1i0za1 16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD-------YSVTA 87 (160)
T ss_dssp CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS-------GGGGT
T ss_pred ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc-------hhhcc
Confidence 4556789999996 9999999999999986 7888887765542 11 1 1222222333 24699
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|.|+++
T Consensus 88 ~adiVVit 95 (160)
T d1i0za1 88 NSKIVVVT 95 (160)
T ss_dssp TCSEEEEC
T ss_pred cccEEEEe
Confidence 99999998
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.95 E-value=0.0036 Score=47.10 Aligned_cols=73 Identities=19% Similarity=0.175 Sum_probs=44.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchh--hhcCCceEEEEc-c-CCCHHHHHHhh--cCCcEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM--ESFGTYVESMAG-D-ASNKKFLKTAL--RGVRSII 168 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~--~~~~~~vevv~G-D-l~D~~sL~~AL--~GvDaVI 168 (209)
-.|.++|||.|+ |.+|...+..+...|.. |.+..+++++.. ..++. .+++.- + -.+.....+.. .|+|.||
T Consensus 26 ~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa-~~~i~~~~~~~~~~~~~~~~~~~g~D~vi 103 (176)
T d2fzwa2 26 LEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA-TECINPQDFSKPIQEVLIEMTDGGVDYSF 103 (176)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC-SEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCC-cEEEeCCchhhHHHHHHHHHcCCCCcEee
Confidence 356789999998 56899999888888965 555556665543 23332 223321 1 12222222222 5899999
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
.+
T Consensus 104 d~ 105 (176)
T d2fzwa2 104 EC 105 (176)
T ss_dssp EC
T ss_pred ec
Confidence 87
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.92 E-value=0.0048 Score=46.51 Aligned_cols=63 Identities=11% Similarity=0.008 Sum_probs=46.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|+|.+. |+|.+|+.+++.|++.+++|.+..|++++...... .++.+ .. +..++++.+|.||.+
T Consensus 1 MkIg~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~----~~---~~~~~~~~~dvIila 64 (152)
T d2ahra2 1 MKIGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AM---SHQDLIDQVDLVILG 64 (152)
T ss_dssp CEEEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CS---SHHHHHHTCSEEEEC
T ss_pred CEEEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee----ec---hhhhhhhccceeeee
Confidence 578888 58999999999999999999999998876643211 11222 12 356678899999887
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=95.90 E-value=0.012 Score=44.92 Aligned_cols=68 Identities=16% Similarity=0.122 Sum_probs=45.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhh----------cCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~----------~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
+.+++|.|.|| |.+|+.++..|..++. ++..++.++..+... .+...... +. ...+++++++|
T Consensus 5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~----~~~~~~~~~ad 78 (154)
T d1pzga1 5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-AE----YSYEAALTGAD 78 (154)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-EE----CSHHHHHTTCS
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-cc----CchhhhhcCCC
Confidence 35679999998 9999999988877774 788877777654211 11111111 11 12467899999
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.|+.+
T Consensus 79 iVvit 83 (154)
T d1pzga1 79 CVIVT 83 (154)
T ss_dssp EEEEC
T ss_pred eEEEe
Confidence 99987
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.90 E-value=0.0055 Score=45.93 Aligned_cols=37 Identities=16% Similarity=0.068 Sum_probs=29.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcch
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNA 136 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a 136 (209)
|++|+|.| .|.+|..+++.|.+.|+ +|.+.+|+++..
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~ 39 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESI 39 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHH
Confidence 56799997 59999999999999997 456666665443
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=95.89 E-value=0.029 Score=45.27 Aligned_cols=70 Identities=9% Similarity=0.117 Sum_probs=50.7
Q ss_pred cCCCCeEEEEcC----------------CCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHH
Q 028418 96 EEARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159 (209)
Q Consensus 96 ~~~~~~ILVTGA----------------TGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~ 159 (209)
+..+++||||+| ||.+|..|++.+..+|++|.++.-..... .+.++.++. +...+.+.+
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~---~p~~~~~~~--~~t~~~m~~ 77 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP---TPPFVKRVD--VMTALEMEA 77 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC---CCTTEEEEE--CCSHHHHHH
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC---cccccccce--ehhhHHHHH
Confidence 455778888875 89999999999999999999998654421 234555554 344444444
Q ss_pred h----hcCCcEEEEc
Q 028418 160 A----LRGVRSIICP 170 (209)
Q Consensus 160 A----L~GvDaVIh~ 170 (209)
+ +..+|++|++
T Consensus 78 ~~~~~~~~~D~~i~a 92 (223)
T d1u7za_ 78 AVNASVQQQNIFIGC 92 (223)
T ss_dssp HHHHHGGGCSEEEEC
T ss_pred HHHhhhccceeEeee
Confidence 4 4689999998
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.80 E-value=0.015 Score=44.33 Aligned_cols=67 Identities=10% Similarity=0.123 Sum_probs=45.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEeCCcchhh----------hcCCceEEEEccCCCHHHHHHhhcCCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTALRGVR 165 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~----------~~~~~vevv~GDl~D~~sL~~AL~GvD 165 (209)
.|+.+|.|.|| |.+|++++..|..++ .+++.++++++.+.. .......+...+ + .++++++|
T Consensus 1 ap~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~ad 73 (150)
T d1t2da1 1 APKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGAD 73 (150)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCS
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCc
Confidence 47889999996 999999998777766 467777777765421 112223333222 1 36789999
Q ss_pred EEEEc
Q 028418 166 SIICP 170 (209)
Q Consensus 166 aVIh~ 170 (209)
.|+.+
T Consensus 74 vvvit 78 (150)
T d1t2da1 74 VVIVT 78 (150)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99988
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.80 E-value=0.012 Score=45.62 Aligned_cols=68 Identities=15% Similarity=0.168 Sum_probs=47.6
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchh----h------hcCCceEEEEccCCCHHHHHHhhc
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAM----E------SFGTYVESMAGDASNKKFLKTALR 162 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~----~------~~~~~vevv~GDl~D~~sL~~AL~ 162 (209)
..-.+.+|.|+|| |.+|+.++..|..++. +++.++++++++. . ..+........|+ ++++
T Consensus 15 ~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~ 86 (159)
T d2ldxa1 15 DKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSA 86 (159)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGT
T ss_pred ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhc
Confidence 3456679999996 9999999999998875 7888887765542 1 1112222333332 4689
Q ss_pred CCcEEEEc
Q 028418 163 GVRSIICP 170 (209)
Q Consensus 163 GvDaVIh~ 170 (209)
++|.||.+
T Consensus 87 ~adivvit 94 (159)
T d2ldxa1 87 NSKLVIIT 94 (159)
T ss_dssp TEEEEEEC
T ss_pred cccEEEEe
Confidence 99999987
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=95.79 E-value=0.0014 Score=51.14 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=27.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEE
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV 130 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLv 130 (209)
...+|.|.||+|.+|+.|++.+.+. +.++.+..
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~ 36 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAAL 36 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 4568999999999999999988874 67776665
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.66 E-value=0.021 Score=43.68 Aligned_cols=96 Identities=13% Similarity=0.009 Sum_probs=57.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceE-EEEccCCC--HHHHHHhh--cCCcEEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVE-SMAGDASN--KKFLKTAL--RGVRSIIC 169 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~ve-vv~GDl~D--~~sL~~AL--~GvDaVIh 169 (209)
..+.++|||.|+ |-+|...+..+...|. +|.+.++++++.+....-+++ ++.-.-.| .+...+.. .|+|.||-
T Consensus 25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid 103 (174)
T d1p0fa2 25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVE 103 (174)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEE
Confidence 467789999996 9999999999988886 677777888765422222233 33211122 12222333 48999998
Q ss_pred cC--hhHHHHHHHh--CCCCEEEEecc
Q 028418 170 PS--EGFISNAGSL--KGVQHVILLSQ 192 (209)
Q Consensus 170 ~a--~g~ll~AA~~--aGVkriV~vSS 192 (209)
+. ..++.+++.. .+-.++|.+..
T Consensus 104 ~~g~~~~~~~~~~~~~~~~G~~v~vG~ 130 (174)
T d1p0fa2 104 CAGRIETMMNALQSTYCGSGVTVVLGL 130 (174)
T ss_dssp CSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred cCCCchHHHHHHHHHHHhcCceEEEEE
Confidence 72 2333444332 23356776553
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.64 E-value=0.039 Score=41.25 Aligned_cols=64 Identities=14% Similarity=0.054 Sum_probs=44.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhh----------hcCCceEEE-EccCCCHHHHHHhhcCCcE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME----------SFGTYVESM-AGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~----------~~~~~vevv-~GDl~D~~sL~~AL~GvDa 166 (209)
|++|.|+|| |.+|+.++..|..++. ++..++.+++.+.. ..+....+. ..| .++++++|.
T Consensus 1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d-------~~~~~~adv 72 (142)
T d1uxja1 1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN-------YADTANSDV 72 (142)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-------GGGGTTCSE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCc-------HHHhcCCCE
Confidence 569999997 9999999988887764 78888877765321 112222333 233 346899999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
||.+
T Consensus 73 vvit 76 (142)
T d1uxja1 73 IVVT 76 (142)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9988
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=95.55 E-value=0.018 Score=43.66 Aligned_cols=64 Identities=14% Similarity=0.135 Sum_probs=45.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCCcchhh---------hcCCceEEEEccCCCHHHHHHhhcCCcEEE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAME---------SFGTYVESMAGDASNKKFLKTALRGVRSII 168 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~~~a~~---------~~~~~vevv~GDl~D~~sL~~AL~GvDaVI 168 (209)
.+|.|+|| |++|++++..|..++. +++.+++++.+++. .+.....+...+ | .++++++|.|+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~----~~~~~daDvVV 74 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--D----PEICRDADMVV 74 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--C----GGGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--C----HHHhhCCcEEE
Confidence 37999997 9999999999998885 78888887755421 122223343322 2 24799999999
Q ss_pred Ec
Q 028418 169 CP 170 (209)
Q Consensus 169 h~ 170 (209)
.+
T Consensus 75 it 76 (143)
T d1llda1 75 IT 76 (143)
T ss_dssp EC
T ss_pred Ee
Confidence 98
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.42 E-value=0.014 Score=43.50 Aligned_cols=82 Identities=15% Similarity=0.142 Sum_probs=55.3
Q ss_pred CeEEEEcCC---CHHHHHHHHHHHHCC-CcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C-hh
Q 028418 100 DAVLVTDGD---SDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S-EG 173 (209)
Q Consensus 100 ~~ILVTGAT---GfIG~~VV~~Ll~~G-~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a-~g 173 (209)
++|.|.||+ +..|..+.+.|++.+ ++|..+- |... +.++ +. ..-++.| .-..+|.++.+ . ..
T Consensus 9 ksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVn--P~~~-~i~G--~~-~y~sl~d------lp~~vDlvvi~vp~~~ 76 (129)
T d2csua1 9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVN--IKEE-EVQG--VK-AYKSVKD------IPDEIDLAIIVVPKRF 76 (129)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEEC--SSCS-EETT--EE-CBSSTTS------CSSCCSEEEECSCHHH
T ss_pred CeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEec--cCcc-ccCC--eE-eecchhh------cCCCCceEEEecChHH
Confidence 589999999 999999999988766 5777663 4321 1222 11 2223332 23468998887 2 22
Q ss_pred --HHHHHHHhCCCCEEEEeccc
Q 028418 174 --FISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 174 --~ll~AA~~aGVkriV~vSS~ 193 (209)
.+++.|.+.|++.+|.+|+.
T Consensus 77 ~~~~~~~~~~~g~~~~vi~s~G 98 (129)
T d2csua1 77 VKDTLIQCGEKGVKGVVIITAG 98 (129)
T ss_dssp HHHHHHHHHHHTCCEEEECCCS
T ss_pred hHHHHHHHHHcCCCEEEEeccc
Confidence 27888889999999998874
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.36 E-value=0.0031 Score=49.52 Aligned_cols=70 Identities=10% Similarity=-0.023 Sum_probs=47.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEE-------------ccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMA-------------GDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~-------------GDl~D~~sL~~AL~GvDa 166 (209)
|+|.|. |.|++|..++..|.++||+|.+++.++++..........+.. +.+.-...+.++++.+|.
T Consensus 1 MkI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~ 79 (202)
T d1mv8a2 1 MRISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (202)
T ss_dssp CEEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence 679999 689999999999999999999999877654432211110000 001112235678889999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
+|.+
T Consensus 80 i~i~ 83 (202)
T d1mv8a2 80 SFIC 83 (202)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9987
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.28 E-value=0.016 Score=43.77 Aligned_cols=82 Identities=9% Similarity=0.031 Sum_probs=54.1
Q ss_pred CCeEEEEcCC---CHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C---
Q 028418 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--- 171 (209)
Q Consensus 99 ~~~ILVTGAT---GfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a--- 171 (209)
.++|+|.||+ +..|..+++.|++.||+|..+ +|... ..++ ..+ .- ++.+.-..+|.|+.+ .
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pV--nP~~~-~i~G--~~~-~~------sl~dlp~~iD~v~i~vp~~~ 86 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--NPKYE-EVLG--RKC-YP------SVLDIPDKIEVVDLFVKPKL 86 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--CTTCS-EETT--EEC-BS------SGGGCSSCCSEEEECSCHHH
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEE--CCccc-ccCC--Ccc-cc------cccccCccceEEEEEeCHHH
Confidence 4689999999 889999999999999987666 34321 2222 111 11 223334457888776 2
Q ss_pred hhHHHHHHHhCCCCEEEEecc
Q 028418 172 EGFISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~ll~AA~~aGVkriV~vSS 192 (209)
...+++.|.+.|++.+++.+.
T Consensus 87 ~~~~~~e~~~~g~k~v~~~~G 107 (139)
T d2d59a1 87 TMEYVEQAIKKGAKVVWFQYN 107 (139)
T ss_dssp HHHHHHHHHHHTCSEEEECTT
T ss_pred HHHHHHHHHHhCCCEEEEecc
Confidence 223677778888887776544
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.27 E-value=0.017 Score=45.30 Aligned_cols=73 Identities=10% Similarity=-0.024 Sum_probs=47.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCceEEEEccCCCHH---HHHHhhc--CCcEEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTALR--GVRSIIC 169 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~vevv~GDl~D~~---sL~~AL~--GvDaVIh 169 (209)
-.+.++|||.|| |-+|...+..+...|. +|.+..+++++......-+++.+. |..+.+ .+.+... |+|.+|.
T Consensus 23 v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid 100 (195)
T d1kola2 23 VGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVD 100 (195)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEE
Confidence 356789999986 9999888887777776 677777777665432222345443 333332 3344433 6899997
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 101 ~ 101 (195)
T d1kola2 101 A 101 (195)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.12 E-value=0.0082 Score=45.50 Aligned_cols=67 Identities=12% Similarity=0.120 Sum_probs=40.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC----c---EEEEEeCC--cchhh-------hcCCceEEEEccCCCHHHHHHhhcC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT----R---IKALVKDK--RNAME-------SFGTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~----~---VraLvR~~--~~a~~-------~~~~~vevv~GDl~D~~sL~~AL~G 163 (209)
++|.|+||+|++|++++..|...+. + ...+.-+. .+... ........+... ....+++++
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 80 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFKD 80 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhccc
Confidence 3899999999999999998887653 1 22222111 11110 111222233322 233689999
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.||.+
T Consensus 81 advViit 87 (154)
T d1y7ta1 81 ADYALLV 87 (154)
T ss_dssp CSEEEEC
T ss_pred ccEEEee
Confidence 9999998
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.09 E-value=0.064 Score=40.21 Aligned_cols=63 Identities=13% Similarity=0.206 Sum_probs=44.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCcchhh----------hcCCceEEEE-ccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----------SFGTYVESMA-GDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~~a~~----------~~~~~vevv~-GDl~D~~sL~~AL~GvDa 166 (209)
|+|.|.|| |++|++++..|..++ .++..++++++.+.. .++....+.. .| .++++++|.
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d-------~~~~~~adi 72 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-------YSLLKGSEI 72 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-------GGGGTTCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCC-------HHHhccccE
Confidence 68999997 999999999888777 468888877765421 1222233332 23 248999999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
||.+
T Consensus 73 Vvit 76 (142)
T d1ojua1 73 IVVT 76 (142)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9988
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.95 E-value=0.016 Score=43.88 Aligned_cols=67 Identities=13% Similarity=0.004 Sum_probs=39.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-------cEEEEEeCCcc--hhhh-------cCCceEEEEccCCCHHHHHHhhcC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRN--AMES-------FGTYVESMAGDASNKKFLKTALRG 163 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-------~VraLvR~~~~--a~~~-------~~~~vevv~GDl~D~~sL~~AL~G 163 (209)
++|.|+||+|++|++++..|...+. +++.+..+... +... .......+..- ....+++++
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 79 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT----DKEEIAFKD 79 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE----SCHHHHTTT
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccC----cccccccCC
Confidence 3899999999999999998876442 23333333321 1110 11112222211 123678999
Q ss_pred CcEEEEc
Q 028418 164 VRSIICP 170 (209)
Q Consensus 164 vDaVIh~ 170 (209)
+|.||.+
T Consensus 80 ~dvVVit 86 (154)
T d5mdha1 80 LDVAILV 86 (154)
T ss_dssp CSEEEEC
T ss_pred ceEEEEe
Confidence 9999998
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=94.95 E-value=0.088 Score=39.35 Aligned_cols=84 Identities=14% Similarity=0.178 Sum_probs=57.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEE--EEcC---
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSI--ICPS--- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaV--Ih~a--- 171 (209)
..+|||-|-||..|+.-++++++.|-+|++-+...+.-.... ++-++ +++++|++ ++|+= |.+.
T Consensus 6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~~--giPVf-------~sV~eAv~~~~~~~SvIfVPp~~a 76 (119)
T d2nu7a1 6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHL--GLPVF-------NTVREAVAATGATASVIYVPAPFC 76 (119)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEET--TEEEE-------SSHHHHHHHHCCCEEEECCCGGGH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCcccC--CCchh-------hHHHHHHHHhCCCeEEEeccHHHH
Confidence 458999999999999999999999999999995443322222 23222 24555554 66653 3332
Q ss_pred hhHHHHHHHhCCCCEEEEecc
Q 028418 172 EGFISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~ll~AA~~aGVkriV~vSS 192 (209)
...+++|. ++|++.+|.++-
T Consensus 77 ~dA~~EAi-~agI~~iV~ITE 96 (119)
T d2nu7a1 77 KDSILEAI-DAGIKLIITITE 96 (119)
T ss_dssp HHHHHHHH-HTTCSEEEECCC
T ss_pred HHHHHHHH-HCCCCEEEEecC
Confidence 23356664 789999998764
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=94.93 E-value=0.022 Score=43.25 Aligned_cols=32 Identities=9% Similarity=0.130 Sum_probs=25.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEe
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVK 131 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR 131 (209)
+.+|.|.| +|++|+.+++.|.+. +.+++++..
T Consensus 3 kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~ 35 (170)
T d1f06a1 3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFS 35 (170)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEe
Confidence 34789998 599999999988764 678887774
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.91 E-value=0.0035 Score=49.34 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=48.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh--------cCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~--------~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
|++|.|.| +|.-|..++..|.+.||+|+...|+++..... +-+++++ .-++.=...+.+|++++|.||.+
T Consensus 7 m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iiia 84 (189)
T d1n1ea2 7 LNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILFV 84 (189)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEEC
T ss_pred eceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEEc
Confidence 45799998 48899999999999999999999988654311 0112211 01111123478899999999987
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=94.86 E-value=0.026 Score=42.47 Aligned_cols=92 Identities=13% Similarity=0.082 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhh--cCCceEEEEccCCCHHHHHHhh--cCCcEEEEcC
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTAL--RGVRSIICPS 171 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~--~~~~vevv~GDl~D~~sL~~AL--~GvDaVIh~a 171 (209)
.|.++|||.|+ |.+|...+..+...|. .|.+..+++++.... ++ ..+++.-+=.+.+.+.+.. +|+|.||-+.
T Consensus 31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~g~d~vid~~ 108 (172)
T d1h2ba2 31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLG-ADHVVDARRDPVKQVMELTRGRGVNVAMDFV 108 (172)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTT-CSEEEETTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcc-cceeecCcccHHHHHHHhhCCCCceEEEEec
Confidence 46789999986 9999999988877775 556666766554322 22 2355544433344445544 3689999873
Q ss_pred -hhHHHHHHH---hCCCCEEEEec
Q 028418 172 -EGFISNAGS---LKGVQHVILLS 191 (209)
Q Consensus 172 -~g~ll~AA~---~aGVkriV~vS 191 (209)
....++.+. +.+ .|+|.+.
T Consensus 109 g~~~~~~~a~~~l~~~-G~iv~~G 131 (172)
T d1h2ba2 109 GSQATVDYTPYLLGRM-GRLIIVG 131 (172)
T ss_dssp CCHHHHHHGGGGEEEE-EEEEECC
T ss_pred CcchHHHHHHHHHhCC-CEEEEEe
Confidence 222233322 222 4777654
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=94.83 E-value=0.0089 Score=47.26 Aligned_cols=68 Identities=18% Similarity=0.203 Sum_probs=56.0
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.-+|+|.|| |-.|..-++.++..|.+|+++++++++.+ ..++..++.. ..+++.+.++++.+|.||.+
T Consensus 32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~a 102 (168)
T d1pjca1 32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA 102 (168)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEe
Confidence 458999985 99999999999999999999998887654 3334445554 57889999999999999987
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.66 E-value=0.012 Score=46.16 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=32.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
++|.|.|| |.+|+.++..+..+||+|++.+++++.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDI 39 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHH
Confidence 58999999 999999999999999999999998864
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.61 E-value=0.043 Score=39.94 Aligned_cols=80 Identities=10% Similarity=0.217 Sum_probs=53.3
Q ss_pred CeEEEEcCC---CHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C-h--
Q 028418 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S-E-- 172 (209)
Q Consensus 100 ~~ILVTGAT---GfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a-~-- 172 (209)
++|.|.||+ +..|..+++.|++.||+|..+ +|... ..++ ..++ .++.+.-..+|.++.+ . .
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pV--nP~~~-~i~G--~~~y-------~sl~~lp~~~D~vvi~vp~~~~ 69 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPV--NPNYD-EIEG--LKCY-------RSVRELPKDVDVIVFVVPPKVG 69 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--CTTCS-EETT--EECB-------SSGGGSCTTCCEEEECSCHHHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEE--ccccc-cccC--cccc-------ccchhccccceEEEEEeCHHHH
Confidence 589999998 779999999999999987766 34321 1222 1111 1233344467888776 2 2
Q ss_pred hHHHHHHHhCCCCEEEEec
Q 028418 173 GFISNAGSLKGVQHVILLS 191 (209)
Q Consensus 173 g~ll~AA~~aGVkriV~vS 191 (209)
..+++.|.+.|++.+++-+
T Consensus 70 ~~~l~~~~~~g~k~v~~~~ 88 (116)
T d1y81a1 70 LQVAKEAVEAGFKKLWFQP 88 (116)
T ss_dssp HHHHHHHHHTTCCEEEECT
T ss_pred HHHHHHHHhcCCceEEecc
Confidence 2267788889999877654
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=94.36 E-value=0.046 Score=42.77 Aligned_cols=91 Identities=10% Similarity=0.075 Sum_probs=52.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEEeC-Ccchhh-hcCCceEEE----------EccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKD-KRNAME-SFGTYVESM----------AGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLvR~-~~~a~~-~~~~~vevv----------~GDl~D~~sL~~AL~GvDa 166 (209)
-+|.|-| .|.||+.++|.|.++ +.+|+++... +..... ++..+.... ...+.-...+..++.++|.
T Consensus 2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDi 80 (178)
T d1b7go1 2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDI 80 (178)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSE
T ss_pred eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCE
Confidence 4789998 899999999999986 4788888642 221111 110010000 0111122245666789999
Q ss_pred EEEcC-hhH---HHHHHHhCCCCEEEEecc
Q 028418 167 IICPS-EGF---ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 167 VIh~a-~g~---ll~AA~~aGVkriV~vSS 192 (209)
||-|. ... -++...++| +|+|+.++
T Consensus 81 ViecTG~f~~~e~a~~hl~~G-~KvIi~~~ 109 (178)
T d1b7go1 81 VVDTTPNGVGAQYKPIYLQLQ-RNAIFQGG 109 (178)
T ss_dssp EEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred EEECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence 99873 221 344445678 56676543
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.34 E-value=0.014 Score=45.39 Aligned_cols=38 Identities=13% Similarity=0.010 Sum_probs=33.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a 136 (209)
.-++|.|.|| |.+|+.++..++.+|++|++.+++++..
T Consensus 3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l 40 (186)
T d1wdka3 3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGI 40 (186)
T ss_dssp CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 3467999999 9999999999999999999999988643
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=94.22 E-value=0.086 Score=39.72 Aligned_cols=91 Identities=10% Similarity=0.130 Sum_probs=54.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEE-eCCcchh--hhcCCceEEEEccCCCHHHHH---Hhh-cCCcEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAM--ESFGTYVESMAGDASNKKFLK---TAL-RGVRSII 168 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLv-R~~~~a~--~~~~~~vevv~GDl~D~~sL~---~AL-~GvDaVI 168 (209)
..+.++|||.|+ |.||...+..+...|.++...+ +++.+.. +.++. .+++ |..+++..+ +.. .|+|.||
T Consensus 26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga-~~~i--~~~~~~~~~~i~~~t~gg~D~vi 101 (174)
T d1f8fa2 26 VTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-THVI--NSKTQDPVAAIKEITDGGVNFAL 101 (174)
T ss_dssp CCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-SEEE--ETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC-eEEE--eCCCcCHHHHHHHHcCCCCcEEE
Confidence 457889999997 9999999988888888766554 4554433 23332 2444 344433333 222 2589999
Q ss_pred Ec-C-hhHH---HHHHHhCCCCEEEEecc
Q 028418 169 CP-S-EGFI---SNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 169 h~-a-~g~l---l~AA~~aGVkriV~vSS 192 (209)
-+ . ..++ ++..+.. .++++++.
T Consensus 102 d~~G~~~~~~~~~~~~~~~--G~i~~~G~ 128 (174)
T d1f8fa2 102 ESTGSPEILKQGVDALGIL--GKIAVVGA 128 (174)
T ss_dssp ECSCCHHHHHHHHHTEEEE--EEEEECCC
T ss_pred EcCCcHHHHHHHHhcccCc--eEEEEEee
Confidence 87 2 2222 2223333 36777654
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=94.06 E-value=0.06 Score=40.08 Aligned_cols=64 Identities=11% Similarity=0.052 Sum_probs=38.8
Q ss_pred CCeEEEEcCCCHHHHH-HHHHHHH-CCCcEEEEE-eCCcchhhhcC-CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 99 RDAVLVTDGDSDIGQM-VILSLIV-KRTRIKALV-KDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~-VV~~Ll~-~G~~VraLv-R~~~~a~~~~~-~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+.+|.|.| +|.+|+. .++.|.. .+.+++++. ++++++..... .++.+ +++ +.+.++.+|+|+.+
T Consensus 1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~----~~~---~~~l~~~~D~V~I~ 68 (164)
T d1tlta1 1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY----ADS---LSSLAASCDAVFVH 68 (164)
T ss_dssp CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB----CSS---HHHHHTTCSEEEEC
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc----ccc---chhhhhhccccccc
Confidence 35799999 5999975 4555554 367888777 55655432211 11221 233 34445789999877
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=93.73 E-value=0.029 Score=43.08 Aligned_cols=39 Identities=13% Similarity=0.204 Sum_probs=32.7
Q ss_pred CCCCeEEE-EcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 97 EARDAVLV-TDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 97 ~~~~~ILV-TGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
.|..+++| +||+|.+|...++.....|.+|.+++|+++.
T Consensus 27 ~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~ 66 (189)
T d1gu7a2 27 TPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 66 (189)
T ss_dssp CTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc
Confidence 34556666 6999999999999888899999999987754
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.55 E-value=0.042 Score=44.29 Aligned_cols=101 Identities=11% Similarity=0.148 Sum_probs=64.4
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcc-hhhhcCCceEEEEccC-------------------CC
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN-AMESFGTYVESMAGDA-------------------SN 153 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~-a~~~~~~~vevv~GDl-------------------~D 153 (209)
.+..+.+|.|.|- |.-|.+++..|.+.+.+ |..+.-|... ..........+..|.- .+
T Consensus 11 ~~~~~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~ 89 (209)
T d2vapa1 11 LQQTKAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKES 89 (209)
T ss_dssp HHTTCCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHT
T ss_pred HhccCCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCcchhcccccccccccccccchHHHHHHHHHH
Confidence 4566778999885 55788999999988753 6655544322 1111111222332222 23
Q ss_pred HHHHHHhhcCCcEEEEcC-----hhH-----HHHHHHhCCCCEEEEecccccc
Q 028418 154 KKFLKTALRGVRSIICPS-----EGF-----ISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 154 ~~sL~~AL~GvDaVIh~a-----~g~-----ll~AA~~aGVkriV~vSS~~Vy 196 (209)
.+.+.++++|+|.||.++ .|+ +.+.|++.|+.-+-+++..-.+
T Consensus 90 ~~~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g~lvv~ivtlPF~~ 142 (209)
T d2vapa1 90 AEEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVTLPFVM 142 (209)
T ss_dssp HHHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECCGG
T ss_pred HHHHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcCCcEEEEEecchhh
Confidence 458889999999999872 222 7889999998777777665444
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.52 E-value=0.27 Score=37.14 Aligned_cols=84 Identities=12% Similarity=0.077 Sum_probs=57.6
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc-----C
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP-----S 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~-----a 171 (209)
..+|+|-|=||..|+.-+++.++.|-+|++-+...+.-.... ++-++ +++.+|.+ |+|+=+.. +
T Consensus 15 ~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~~~--giPVf-------~tV~eA~~~~~~daSvIfVPp~~a 85 (130)
T d1euca1 15 NTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHL--GLPVF-------NTVKEAKEQTGATASVIYVPPPFA 85 (130)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET--TEEEE-------SSHHHHHHHHCCCEEEECCCHHHH
T ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCcccc--Cccch-------hhHHHHHHhcCCcEEEEecCHHHH
Confidence 458999999999999999999999999999995444322222 23221 24566654 67764333 1
Q ss_pred hhHHHHHHHhCCCCEEEEecc
Q 028418 172 EGFISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~ll~AA~~aGVkriV~vSS 192 (209)
...++||+ ++|++-||.++-
T Consensus 86 ~dAi~EAi-~agI~liV~ITE 105 (130)
T d1euca1 86 AAAINEAI-DAEVPLVVCITE 105 (130)
T ss_dssp HHHHHHHH-HTTCSEEEECCC
T ss_pred HHHHHHHH-hCCCCEEEEecC
Confidence 33356654 689999888764
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=93.48 E-value=0.028 Score=42.50 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=32.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
|+|.|.| .|.+|..+++.|+++||+|.+..|+++++.
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~ 38 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSE 38 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence 5688885 899999999999999999999999887764
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=93.42 E-value=0.062 Score=41.80 Aligned_cols=59 Identities=20% Similarity=0.272 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..++|.|.| .|.||+.+++.|..-|.+|.+..|++..... .-.+++.+.++.+|.|+++
T Consensus 41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~-------------~~~~~l~ell~~sDiv~~~ 99 (181)
T d1qp8a1 41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPW-------------RFTNSLEEALREARAAVCA 99 (181)
T ss_dssp TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSS-------------CCBSCSHHHHTTCSEEEEC
T ss_pred cCceEEEec-cccccccceeeeeccccccccccccccccce-------------eeeechhhhhhccchhhcc
Confidence 457899998 5779999999999999999999887654221 1112578899999998865
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=93.39 E-value=0.095 Score=40.22 Aligned_cols=67 Identities=7% Similarity=0.017 Sum_probs=43.8
Q ss_pred CCCeEEEEcCCCHHHHH--HHHHHHHC----CCcEEEEEeCCcchhh----------hcCCceEEEEccCCCHHHHHHhh
Q 028418 98 ARDAVLVTDGDSDIGQM--VILSLIVK----RTRIKALVKDKRNAME----------SFGTYVESMAGDASNKKFLKTAL 161 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~--VV~~Ll~~----G~~VraLvR~~~~a~~----------~~~~~vevv~GDl~D~~sL~~AL 161 (209)
|.++|.|.|| |.+|.. ++..|+.. +.+++.+++++++++. .++...++... + ...+|+
T Consensus 1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--t---d~~eaL 74 (171)
T d1obba1 1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--M---NLDDVI 74 (171)
T ss_dssp CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--S---CHHHHH
T ss_pred CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--C---Chhhcc
Confidence 6789999997 877754 33344432 4689999998876431 12223333221 2 357799
Q ss_pred cCCcEEEEc
Q 028418 162 RGVRSIICP 170 (209)
Q Consensus 162 ~GvDaVIh~ 170 (209)
+|+|.|+..
T Consensus 75 ~dad~Vv~~ 83 (171)
T d1obba1 75 IDADFVINT 83 (171)
T ss_dssp TTCSEEEEC
T ss_pred cCCCeEeee
Confidence 999999987
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=93.34 E-value=0.3 Score=36.36 Aligned_cols=84 Identities=23% Similarity=0.235 Sum_probs=56.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc--CCcEEEEc--C---
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP--S--- 171 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~--GvDaVIh~--a--- 171 (209)
..+|+|-|=||..|+.-+++.++.|-+|++-+...+.-.... ++-++ +++++|++ ++|+=+.. .
T Consensus 7 ~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~~--giPVf-------~tV~eAv~~~~~d~SvIfVPp~~a 77 (121)
T d1oi7a1 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVL--GVPVY-------DTVKEAVAHHEVDASIIFVPAPAA 77 (121)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET--TEEEE-------SSHHHHHHHSCCSEEEECCCHHHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEEE--CCchH-------hhHHHHHHhcCCeEEEEeeCHHHH
Confidence 348999999999999999999999999999995444322221 23221 24455553 67764333 1
Q ss_pred hhHHHHHHHhCCCCEEEEecc
Q 028418 172 EGFISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 172 ~g~ll~AA~~aGVkriV~vSS 192 (209)
...+++|. ++|++.+|.++-
T Consensus 78 ~dAi~EAi-~agI~liv~ITE 97 (121)
T d1oi7a1 78 ADAALEAA-HAGIPLIVLITE 97 (121)
T ss_dssp HHHHHHHH-HTTCSEEEECCS
T ss_pred HHHHHHHH-hCCCcEEEEecC
Confidence 23355554 779999888764
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.34 E-value=0.1 Score=40.32 Aligned_cols=92 Identities=16% Similarity=0.118 Sum_probs=53.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEe-CCcch-hhhcCCceEEEEccC-----------CCHHHHHHhhcCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVK-DKRNA-MESFGTYVESMAGDA-----------SNKKFLKTALRGVR 165 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR-~~~~a-~~~~~~~vevv~GDl-----------~D~~sL~~AL~GvD 165 (209)
.+|.|-| .|.||+.++|.|+++. .+|+++.. ++... ..+...+...+..+. .....+..++.++|
T Consensus 3 irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD 81 (172)
T d2czca2 3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD 81 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCC
Confidence 4789888 5999999999998754 67777763 22211 111112233333322 22234555678999
Q ss_pred EEEEcC-hhH---HHHHHHhCCCCEEEEeccc
Q 028418 166 SIICPS-EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 166 aVIh~a-~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
.|+-|+ ... -++.-.++|+| .|++|+.
T Consensus 82 vViEcTG~f~~~~~~~~hl~~G~k-~Vi~s~~ 112 (172)
T d2czca2 82 IIVDATPGGIGAKNKPLYEKAGVK-AIFQGGE 112 (172)
T ss_dssp EEEECCSTTHHHHHHHHHHHHTCE-EEECTTS
T ss_pred EEEECCCCCCCHHHHHHHHHcCCC-EEEECCC
Confidence 999873 211 23444578975 5556654
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=93.24 E-value=0.045 Score=40.93 Aligned_cols=34 Identities=26% Similarity=0.163 Sum_probs=30.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
|+|+|.|| |..|-..+..|.++|++|.++-+++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~ 34 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR 34 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 57999998 99999999999999999999987654
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=93.13 E-value=0.047 Score=45.38 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=30.4
Q ss_pred CCeEEEEc--CCCHHHHHHHHHHHHCCCcEEEEEeCC
Q 028418 99 RDAVLVTD--GDSDIGQMVILSLIVKRTRIKALVKDK 133 (209)
Q Consensus 99 ~~~ILVTG--ATGfIG~~VV~~Ll~~G~~VraLvR~~ 133 (209)
.+..|||| ++.-||+.++++|.++|.+|....|+.
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~ 38 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP 38 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence 46899999 556899999999999999999887654
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.03 E-value=0.11 Score=37.53 Aligned_cols=37 Identities=11% Similarity=0.139 Sum_probs=31.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a 136 (209)
.++|+|.| .|++|-.++..|.++|.+|..+.|.+...
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~l 66 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRLM 66 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccccc
Confidence 46777776 59999999999999999999999887653
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.01 E-value=0.07 Score=41.62 Aligned_cols=65 Identities=17% Similarity=0.075 Sum_probs=51.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++++|.| .|.||+-+++.|...|.+|.+...+|-++.+..-.+.++. .+.+++.-+|.+|.+
T Consensus 22 l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~--------~~~~a~~~adivvta 86 (163)
T d1li4a1 22 IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVT--------TMDEACQEGNIFVTT 86 (163)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEee--------ehhhhhhhccEEEec
Confidence 4567788876 8999999999999999999999999876654433334442 467889999998877
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=92.99 E-value=0.033 Score=42.36 Aligned_cols=39 Identities=10% Similarity=0.243 Sum_probs=33.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchh
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM 137 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~ 137 (209)
..++|||.|| |..++.++..|...|. +|.++.|+++++.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~ 55 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQ 55 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHH
Confidence 3568999998 7899999999999996 7999999988764
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=92.91 E-value=0.09 Score=40.09 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=46.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhh---cC--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~---~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
..+.++|||.|| |..++.++..|.+.+.+|.++.|+.+++... +. ..+..+.-|- ..+..+|.||.+
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-------~~~~~~diiIN~ 86 (171)
T d1p77a1 15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-------IPLQTYDLVINA 86 (171)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-------CCCSCCSEEEEC
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc-------ccccccceeeec
Confidence 345678999987 6679999999999889999999998776532 22 1233333331 135678888877
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=92.81 E-value=0.088 Score=39.55 Aligned_cols=35 Identities=26% Similarity=0.282 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~ 133 (209)
.+++|+|.|| |..|-..+..|.++|++|.++.|+.
T Consensus 5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4568999985 9999999999999999999999864
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=92.81 E-value=0.19 Score=34.99 Aligned_cols=80 Identities=5% Similarity=-0.131 Sum_probs=55.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh-hhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C--hh-H
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--EG-F 174 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~-~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a--~g-~ 174 (209)
++|-++|-.|-==+.|++.|+++|++|.+-++...+.. .+...++.+..+ .+++ -++++|.||.. + .. .
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~g--h~~~----~i~~~d~vV~SsAI~~~np 75 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVP--HSAD----NWYDPDLVIKTPAVRDDNP 75 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESS--CCTT----SCCCCSEEEECTTCCTTCH
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEee--eccc----ccCCCCEEEEecCcCCCCH
Confidence 67888877665445788999999999999998775432 333355776655 2222 24789999887 2 22 3
Q ss_pred HHHHHHhCCCC
Q 028418 175 ISNAGSLKGVQ 185 (209)
Q Consensus 175 ll~AA~~aGVk 185 (209)
.+.+|++.|++
T Consensus 76 el~~A~~~gIp 86 (89)
T d1j6ua1 76 EIVRARMERVP 86 (89)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 78899999985
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=92.71 E-value=0.11 Score=41.29 Aligned_cols=70 Identities=13% Similarity=-0.061 Sum_probs=50.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEcc----------------------CCCHHHH
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGD----------------------ASNKKFL 157 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GD----------------------l~D~~sL 157 (209)
-+|+|.|| |-.|.+-++..+..|.+|++++.++...++....+..++.-+ ...++.+
T Consensus 30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~l 108 (183)
T d1l7da1 30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV 108 (183)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHH
T ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHHH
Confidence 47899985 899999999999999999999988876543221112222111 1235678
Q ss_pred HHhhcCCcEEEEc
Q 028418 158 KTALRGVRSIICP 170 (209)
Q Consensus 158 ~~AL~GvDaVIh~ 170 (209)
.++++.+|.||.+
T Consensus 109 ~~~l~~aDlVI~t 121 (183)
T d1l7da1 109 LKELVKTDIAITT 121 (183)
T ss_dssp HHHHTTCSEEEEC
T ss_pred HHHHHhhhhheee
Confidence 8889999999987
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.43 E-value=0.069 Score=39.40 Aligned_cols=36 Identities=14% Similarity=0.346 Sum_probs=32.0
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~ 132 (209)
+...++|||.|| |.+|..-++.|++.|.+|+++...
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356789999999 999999999999999999999743
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=92.28 E-value=0.41 Score=36.74 Aligned_cols=93 Identities=13% Similarity=0.093 Sum_probs=52.9
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCC-CcEEEEEe-CCcch-hhhcCCceEEEEcc-----------CCCHHHHHHhhcCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVK-DKRNA-MESFGTYVESMAGD-----------ASNKKFLKTALRGV 164 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G-~~VraLvR-~~~~a-~~~~~~~vevv~GD-----------l~D~~sL~~AL~Gv 164 (209)
|.+|.|-| -|.||+.++|.|.+++ .+|+++.. ++... ..+...+....... +.-...+..++.++
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v 79 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence 45788887 7999999999988765 67777663 22211 11111112222211 11112455667899
Q ss_pred cEEEEcC-hhH---HHHHHHhCCCCEEEEeccc
Q 028418 165 RSIICPS-EGF---ISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 165 DaVIh~a-~g~---ll~AA~~aGVkriV~vSS~ 193 (209)
|.||-|. ... -++.-.++|+ ++|++|+.
T Consensus 80 DvViEcTG~f~~~~~~~~hl~~G~-K~vi~~~~ 111 (171)
T d1cf2o1 80 DIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGE 111 (171)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTC-EEEECTTS
T ss_pred CEEEEccCCCCCHHHHHHHHHcCC-CEEEECCC
Confidence 9999773 221 2333456786 56666554
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=92.28 E-value=0.31 Score=36.92 Aligned_cols=89 Identities=17% Similarity=0.089 Sum_probs=50.2
Q ss_pred CCeEEEEcCCCHHHHHH-HHHHHH-CCCcEEEEE-eCCcchh--hhcCCceEEEEccCCCHHHHHHh--hcCCcEEEEc-
Q 028418 99 RDAVLVTDGDSDIGQMV-ILSLIV-KRTRIKALV-KDKRNAM--ESFGTYVESMAGDASNKKFLKTA--LRGVRSIICP- 170 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~V-V~~Ll~-~G~~VraLv-R~~~~a~--~~~~~~vevv~GDl~D~~sL~~A--L~GvDaVIh~- 170 (209)
+.+|.|.| ||.||+.+ ++.|.. ...++++++ |+++... .....++.+.. ...+.+.+. +.++|.||.+
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~---~~~d~l~~~~~~~~iDiVf~AT 79 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY---AGVEGLIKLPEFADIDFVFDAT 79 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES---SHHHHHHHSGGGGGEEEEEECS
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc---cceeeeeecccccccCEEEEcC
Confidence 46899999 99999864 455443 346788886 5654321 11112344432 233444443 4689999986
Q ss_pred ChhH-----HHHHHHhCCCCEEEEecc
Q 028418 171 SEGF-----ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 171 a~g~-----ll~AA~~aGVkriV~vSS 192 (209)
..+. .+-.+.++| .++|=.|+
T Consensus 80 pag~h~~~~~~~~aa~~G-~~VID~s~ 105 (157)
T d1nvmb1 80 SASAHVQNEALLRQAKPG-IRLIDLTP 105 (157)
T ss_dssp CHHHHHHHHHHHHHHCTT-CEEEECST
T ss_pred CchhHHHhHHHHHHHHcC-CEEEEccc
Confidence 2222 222234556 45666666
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=92.27 E-value=0.0055 Score=45.31 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-ChhHHHHHHHhC--C
Q 028418 107 GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGFISNAGSLK--G 183 (209)
Q Consensus 107 ATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a~g~ll~AA~~a--G 183 (209)
|+|.+|+++++.|.+.++.+.+..|+++++..+...+.. ... ++.++++.+|.||.+ ....+.+.+.+- .
T Consensus 6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~----~~~---~~~~~~~~~DiVil~v~d~~i~~v~~~l~~~ 78 (153)
T d2i76a2 6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG----KAA---TLEKHPELNGVVFVIVPDRYIKTVANHLNLG 78 (153)
T ss_dssp SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC----CCC---SSCCCCC---CEEECSCTTTHHHHHTTTCCS
T ss_pred eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc----ccc---chhhhhccCcEEEEeccchhhhHHHhhhccc
Confidence 589999999987766444445778988876543221111 111 234678889999987 333333333222 2
Q ss_pred CCEEEEecc
Q 028418 184 VQHVILLSQ 192 (209)
Q Consensus 184 VkriV~vSS 192 (209)
-+-+|.+|+
T Consensus 79 ~~ivi~~s~ 87 (153)
T d2i76a2 79 DAVLVHCSG 87 (153)
T ss_dssp SCCEEECCS
T ss_pred ceeeeeccc
Confidence 234555554
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=92.04 E-value=0.67 Score=32.18 Aligned_cols=83 Identities=7% Similarity=-0.033 Sum_probs=56.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch-hhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc-C--h
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S--E 172 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a-~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~-a--~ 172 (209)
...++|.+.|-.|--=+.|++.|.++|++|..-++...+. ..+...++++..+.-. +-+.++|.||.. + .
T Consensus 6 ~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~------~~i~~~d~vV~S~AI~~ 79 (96)
T d1p3da1 6 RRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE------EHIEGASVVVVSSAIKD 79 (96)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG------GGGTTCSEEEECTTSCT
T ss_pred hhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCcc------ccCCCCCEEEECCCcCC
Confidence 3456788887655333668899999999999999876443 2333456777665542 235788998876 2 2
Q ss_pred h-HHHHHHHhCCCC
Q 028418 173 G-FISNAGSLKGVQ 185 (209)
Q Consensus 173 g-~ll~AA~~aGVk 185 (209)
. .-+.+|++.|++
T Consensus 80 ~npel~~A~~~gip 93 (96)
T d1p3da1 80 DNPELVTSKQKRIP 93 (96)
T ss_dssp TCHHHHHHHHTTCC
T ss_pred CCHHHHHHHHcCCC
Confidence 2 367788998886
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=92.00 E-value=0.19 Score=36.48 Aligned_cols=89 Identities=4% Similarity=-0.042 Sum_probs=56.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHH-HCCCcEEEEEeCC-cchhhhcCCceEEEEccCCCHHHHHHhhc-CCcEEEEcC--h--
Q 028418 100 DAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDK-RNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPS--E-- 172 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll-~~G~~VraLvR~~-~~a~~~~~~~vevv~GDl~D~~sL~~AL~-GvDaVIh~a--~-- 172 (209)
.+|+|.| +|.+|+.+++.|. ..+++++++.-+. ++..... .++.+.. ++.+.+..+ .++.++.+. .
T Consensus 4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I-~Gi~V~~-----~~~l~~~~~~~i~iai~~i~~~~~ 76 (126)
T d2dt5a2 4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGRPV-RGGVIEH-----VDLLPQRVPGRIEIALLTVPREAA 76 (126)
T ss_dssp EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE-TTEEEEE-----GGGHHHHSTTTCCEEEECSCHHHH
T ss_pred ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE-CCEEEec-----HHHHHHHHhhcccEEEEeCCHHHH
Confidence 3788887 5999999998774 4578999998644 3322222 2455542 234555443 455555442 1
Q ss_pred hHHHHHHHhCCCCEEEEeccccc
Q 028418 173 GFISNAGSLKGVQHVILLSQRQR 195 (209)
Q Consensus 173 g~ll~AA~~aGVkriV~vSS~~V 195 (209)
--+++.+.+.||+.|.-++....
T Consensus 77 ~~I~d~l~~~gIk~I~~f~~~~l 99 (126)
T d2dt5a2 77 QKAADLLVAAGIKGILNFAPVVL 99 (126)
T ss_dssp HHHHHHHHHHTCCEEEECSSSCC
T ss_pred HHHHHHHHHcCCCEEeecCceee
Confidence 12888889999998888766544
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=91.73 E-value=0.1 Score=41.22 Aligned_cols=63 Identities=13% Similarity=0.031 Sum_probs=45.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++|.|.| .|.||+.+++.|..-|.+|.+..+...+..... .....++.+.++.+|.|+.+
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~----------~~~~~~l~~~l~~sDii~~~ 103 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEKK----------GYYVDSLDDLYKQADVISLH 103 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHT----------TCBCSCHHHHHHHCSEEEEC
T ss_pred ccCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccccc----------eeeecccccccccccccccc
Confidence 3457899987 799999999999999999998876554322211 11234578888889988754
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.53 E-value=0.083 Score=40.96 Aligned_cols=64 Identities=19% Similarity=-0.001 Sum_probs=45.3
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...+++.|.| .|.||+.+++.|..-|.+|.+..|...+..... ..+++ .+++++++.+|.|+.+
T Consensus 42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~-~~~~~--------~~l~ell~~sDiv~~~ 105 (184)
T d1ygya1 42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ-LGIEL--------LSLDDLLARADFISVH 105 (184)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH-HTCEE--------CCHHHHHHHCSEEEEC
T ss_pred ccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhh-cCcee--------ccHHHHHhhCCEEEEc
Confidence 3456777777 799999999999998999988877655432211 11222 3577889999998754
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=91.51 E-value=0.13 Score=39.36 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
..++|+|.|| |..|..++..|.++|++|+++-|+++.
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~~ 39 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQP 39 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 3568999985 999999999999999999999987654
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=91.49 E-value=0.14 Score=37.93 Aligned_cols=74 Identities=14% Similarity=0.029 Sum_probs=45.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchhhhcCCce-EEEEc-cCCC-HHHHHHhh--cCCcEEEE
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAG-DASN-KKFLKTAL--RGVRSIIC 169 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~~~~~~~v-evv~G-Dl~D-~~sL~~AL--~GvDaVIh 169 (209)
-.+.++|+|.|+ |-+|...+.++...+. +|.+.++++++.+....-++ +++.- +-.+ ...+.+.. .|+|.||-
T Consensus 26 ~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid 104 (175)
T d1cdoa2 26 VEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLE 104 (175)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeee
Confidence 456789999997 4577777777777765 67788887776543322223 33321 1111 23344443 48999998
Q ss_pred c
Q 028418 170 P 170 (209)
Q Consensus 170 ~ 170 (209)
+
T Consensus 105 ~ 105 (175)
T d1cdoa2 105 C 105 (175)
T ss_dssp C
T ss_pred e
Confidence 7
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=91.19 E-value=0.89 Score=34.33 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=27.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKD 132 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~ 132 (209)
++|.|.|+||-||.....-+.+. .++|.+++=+
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~ 37 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN 37 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence 68999999999999988777554 5889999843
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=90.99 E-value=0.12 Score=40.66 Aligned_cols=62 Identities=15% Similarity=0.024 Sum_probs=44.7
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++|.|.| .|.||+.+++.|..-|.+|.+..+.+..... ..+++ .++.+.++.+|.|+.+
T Consensus 43 l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~~~~~--------~~l~~l~~~~D~v~~~ 104 (199)
T d1dxya1 43 LGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH---PDFDY--------VSLEDLFKQSDVIDLH 104 (199)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC---TTCEE--------CCHHHHHHHCSEEEEC
T ss_pred ccceeeeeee-cccccccccccccccceeeeccCCccchhhh---cchhH--------HHHHHHHHhcccceee
Confidence 3456888876 7999999999999999999998876544321 11222 2467788889988754
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.72 E-value=0.16 Score=37.34 Aligned_cols=37 Identities=8% Similarity=-0.080 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN 135 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~ 135 (209)
..++|+|.|| |..|-..+..|.++|+ +|.++.|++..
T Consensus 3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~ 40 (196)
T d1gtea4 3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV 40 (196)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence 3568999985 9999999999999998 59999987643
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=90.69 E-value=0.17 Score=39.07 Aligned_cols=66 Identities=8% Similarity=-0.102 Sum_probs=46.6
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++|.|.| .|.||+.|++.|..-|.+|.+..|...+.......+ +....++.+.++.+|.|+.+
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-------~~~~~~l~~~l~~sD~v~~~ 107 (188)
T d2naca1 42 LEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN-------LTWHATREDMYPVCDVVTLN 107 (188)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHGGGCSEEEEC
T ss_pred ccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccccc-------ccccCCHHHHHHhccchhhc
Confidence 3456788877 899999999999999999999988654332111111 22235677889999998654
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=90.64 E-value=0.24 Score=36.02 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=32.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a 136 (209)
.++|+|.| .|++|-.++..|.+.|.+|..+.|.+...
T Consensus 35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~l 71 (133)
T d1q1ra2 35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARVL 71 (133)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccccc
Confidence 46888886 69999999999999999999999877653
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=90.57 E-value=0.21 Score=35.05 Aligned_cols=35 Identities=14% Similarity=0.070 Sum_probs=30.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
++++|.| .|++|-.++..|.+.|.+|.++.|.+.-
T Consensus 23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGEI 57 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CeEEEEC-CCccceeeeeeecccccEEEEEEeccee
Confidence 4788887 5999999999999999999999987764
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=90.53 E-value=0.13 Score=39.46 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=28.2
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHC--CCcEEEEEeC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKD 132 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~--G~~VraLvR~ 132 (209)
|++|.|.|+||.||...+.-+.+. .++|.+++=+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 568999999999999998877664 5789999843
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=90.41 E-value=0.29 Score=34.78 Aligned_cols=38 Identities=11% Similarity=-0.048 Sum_probs=32.3
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
..| ++++|.| .|+||-.++..|...|.+|+.+.|...-
T Consensus 20 ~~p-~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~l 57 (119)
T d3lada2 20 NVP-GKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDKF 57 (119)
T ss_dssp SCC-SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred cCC-CeEEEEC-CChHHHHHHHHHHHcCCceEEEEeeccc
Confidence 344 5788887 5999999999999999999999987654
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=89.87 E-value=0.14 Score=40.05 Aligned_cols=66 Identities=11% Similarity=-0.052 Sum_probs=46.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
+...++|.|.| .|.||+.+++.|..-|.+|.+..+.......... + +....++.+.++.+|.|+.+
T Consensus 46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-~-------~~~~~~l~~ll~~sD~i~~~ 111 (193)
T d1mx3a1 46 RIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERAL-G-------LQRVSTLQDLLFHSDCVTLH 111 (193)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHH-T-------CEECSSHHHHHHHCSEEEEC
T ss_pred eeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhhh-c-------cccccchhhccccCCEEEEe
Confidence 35677899985 7999999999999999999998875543221110 1 11223677888889988654
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=89.80 E-value=0.17 Score=37.38 Aligned_cols=81 Identities=16% Similarity=-0.035 Sum_probs=48.0
Q ss_pred CeEEEEcCC---CHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEcC--h--
Q 028418 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--E-- 172 (209)
Q Consensus 100 ~~ILVTGAT---GfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~a--~-- 172 (209)
++|.|.||| +..|..+++.|++.||++..+-=++. .....+ .. +..+ +.+.-..+|.|+.+. .
T Consensus 14 ksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~-~~~i~g--~~-~~~~------l~~i~~~iD~v~v~~p~~~v 83 (136)
T d1iuka_ 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQ-GEELFG--EE-AVAS------LLDLKEPVDILDVFRPPSAL 83 (136)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGT-TSEETT--EE-CBSS------GGGCCSCCSEEEECSCHHHH
T ss_pred CeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccc-cceeec--ee-cccc------hhhccCCCceEEEeccHHHH
Confidence 489999998 67999999999999999876642211 111111 11 1111 122223567776662 1
Q ss_pred hHHHHHHHhCCCCEEEEe
Q 028418 173 GFISNAGSLKGVQHVILL 190 (209)
Q Consensus 173 g~ll~AA~~aGVkriV~v 190 (209)
..+++.|.+.|++.+++.
T Consensus 84 ~~~v~~~~~~g~k~i~~q 101 (136)
T d1iuka_ 84 MDHLPEVLALRPGLVWLQ 101 (136)
T ss_dssp TTTHHHHHHHCCSCEEEC
T ss_pred HHHHHHHHhhCCCeEEEe
Confidence 125666666777766553
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=89.70 E-value=0.21 Score=35.68 Aligned_cols=35 Identities=9% Similarity=0.007 Sum_probs=30.6
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
++|+|.| .|+||-.++..|...|.+|+.+.|.+..
T Consensus 23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~i 57 (117)
T d1onfa2 23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFARGNRI 57 (117)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CEEEEEC-CchHHHHHHHHHHhccccceeeehhccc
Confidence 5788887 5999999999999999999999987653
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.62 E-value=0.29 Score=35.64 Aligned_cols=41 Identities=5% Similarity=0.019 Sum_probs=33.8
Q ss_pred cCCCCeEEEEc-CCCHHHHHHHHHHHHCCCcEEEEEeCCcch
Q 028418 96 EEARDAVLVTD-GDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (209)
Q Consensus 96 ~~~~~~ILVTG-ATGfIG~~VV~~Ll~~G~~VraLvR~~~~a 136 (209)
..+.+.++|.+ +.||||..++..|.++|++|..+.|.+...
T Consensus 36 ~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~ 77 (156)
T d1djqa2 36 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLAN 77 (156)
T ss_dssp SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTT
T ss_pred cccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccc
Confidence 55666777663 569999999999999999999999877544
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=89.30 E-value=0.24 Score=35.20 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=29.4
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
++++|.| .|++|-.++..|.+.|++|..+.|.+.
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence 4677766 599999999999999999999988664
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=89.12 E-value=0.26 Score=33.80 Aligned_cols=52 Identities=12% Similarity=0.049 Sum_probs=38.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 153 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D 153 (209)
+++|.|.| +|.+|+.++.+....|++|++++-++.... +....+++..++.+
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa--~~~a~dvIT~e~E~ 52 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPAA--VPFQQSVITAEIER 52 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGGG--SCGGGSEEEESSSC
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCcc--cccccceEEEeecc
Confidence 36788887 699999999999999999999986554332 22224566666654
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=89.04 E-value=0.28 Score=34.29 Aligned_cols=39 Identities=18% Similarity=0.059 Sum_probs=32.6
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
..+.++|+|.| .|+||-.++..|...|.+|..+.|.+..
T Consensus 19 ~~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~~ 57 (121)
T d1mo9a2 19 YEPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEPL 57 (121)
T ss_dssp SCCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred hCCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccchh
Confidence 34556887776 6999999999999999999999987654
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.04 E-value=0.89 Score=33.80 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=40.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHC-CCcEEEEE-eCCcchhh---hcC--CceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALV-KDKRNAME---SFG--TYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~-G~~VraLv-R~~~~a~~---~~~--~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.+|.|.| .|.+|+..++.|... +.+|+++. ++++++.. .++ ....+ +.|.+.+-+ -..+|+|+.+
T Consensus 2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~-~~~iD~v~I~ 73 (184)
T d1ydwa1 2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI----HGSYESLLE-DPEIDALYVP 73 (184)
T ss_dssp EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESSHHHHHH-CTTCCEEEEC
T ss_pred eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee----cCcHHHhhh-ccccceeeec
Confidence 4799999 588999999888764 67888775 55554422 121 22222 244444332 2468998876
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=88.98 E-value=0.14 Score=38.93 Aligned_cols=36 Identities=8% Similarity=0.048 Sum_probs=29.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
|+|.|.| .|++|..++. ++++|++|.+++-++++..
T Consensus 1 MkI~ViG-lG~vGl~~a~-~~a~g~~V~g~Din~~~v~ 36 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGV-LLSLQNEVTIVDILPSKVD 36 (196)
T ss_dssp CEEEEEC-CSHHHHHHHH-HHTTTSEEEEECSCHHHHH
T ss_pred CEEEEEC-CChhHHHHHH-HHHCCCcEEEEECCHHHHH
Confidence 6899996 8999999875 5578999999987776543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=88.80 E-value=0.29 Score=34.52 Aligned_cols=35 Identities=11% Similarity=-0.064 Sum_probs=30.3
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
++|+|.| .|++|-.++..|.+.|++|..+.|.+..
T Consensus 22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEEC-CChhhHHHHHHhhccccEEEEEeecchh
Confidence 4677776 5999999999999999999999987654
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=88.73 E-value=0.28 Score=37.71 Aligned_cols=62 Identities=8% Similarity=0.002 Sum_probs=44.9
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++|+|. |.|.||+.+++.|..-|.+|.+..+....... ....+ ..+.+.++.+|.|+++
T Consensus 42 l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~---~~~~~--------~~l~ell~~sDii~i~ 103 (188)
T d1sc6a1 42 ARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENKLPLG---NATQV--------QHLSDLLNMSDVVSLH 103 (188)
T ss_dssp STTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCT---TCEEC--------SCHHHHHHHCSEEEEC
T ss_pred ccceEEEEe-ecccchhhhhhhcccccceEeeccccccchhh---hhhhh--------hhHHHHHhhccceeec
Confidence 445688888 68999999999999999999999875543221 11111 3577888889998754
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.53 E-value=0.3 Score=34.86 Aligned_cols=39 Identities=8% Similarity=-0.009 Sum_probs=32.7
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a 136 (209)
..| ++++|.| .|+||-.++..|...|.+|..+.|.+...
T Consensus 21 ~~p-~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~~l 59 (122)
T d1v59a2 21 EIP-KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQIG 59 (122)
T ss_dssp SCC-SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred cCC-CeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccccc
Confidence 344 4788887 59999999999999999999999877653
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=88.47 E-value=0.26 Score=38.41 Aligned_cols=66 Identities=11% Similarity=-0.024 Sum_probs=45.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...+++.|.| .|.||+.+++.|..-|.+|.+..+............ ....+++.++++.+|.|+.+
T Consensus 45 l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-------~~~~~~l~~ll~~sD~v~l~ 110 (191)
T d1gdha1 45 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ-------ATFHDSLDSLLSVSQFFSLN 110 (191)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHHHHCSEEEEC
T ss_pred ecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhccc-------ccccCCHHHHHhhCCeEEec
Confidence 3467888886 799999999999999999999887554332111100 11224578888899988644
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.38 E-value=0.3 Score=34.84 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=28.5
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
|+|.| +|..|...+..|.++|++|.++-+++.
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~ 39 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQDH 39 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 77887 799999999999999999999988763
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=88.37 E-value=0.61 Score=33.13 Aligned_cols=36 Identities=14% Similarity=0.120 Sum_probs=30.8
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
.++|+|.| .|++|-.++..|.+.|.+|.++.|.+..
T Consensus 30 ~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~~ 65 (123)
T d1nhpa2 30 VNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDRP 65 (123)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCcc
Confidence 45777775 6899999999999999999999887654
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.06 E-value=0.34 Score=34.59 Aligned_cols=35 Identities=6% Similarity=0.087 Sum_probs=30.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
++++|.|| |+||-.++..|.+.|.+|..+.|.+.-
T Consensus 23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~~ 57 (125)
T d3grsa2 23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDKV 57 (125)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecccc
Confidence 57888875 899999999999999999999997654
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.96 E-value=0.38 Score=34.41 Aligned_cols=35 Identities=14% Similarity=-0.000 Sum_probs=29.5
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~ 132 (209)
..|+ +++|.| .|+||-.++..|.+.|.+|..+.|+
T Consensus 18 ~~P~-~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 18 YCPG-KTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp SCCC-SEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCC-eEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 3443 677777 5999999999999999999999875
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=87.96 E-value=0.29 Score=37.69 Aligned_cols=31 Identities=13% Similarity=0.148 Sum_probs=28.1
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~ 133 (209)
|+|.| .|.+|..++..|.++|++|.++.|+.
T Consensus 7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 88887 59999999999999999999999864
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=87.24 E-value=0.45 Score=34.39 Aligned_cols=35 Identities=14% Similarity=0.078 Sum_probs=29.1
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
+++|+|.| .|++|-.++..|.+.|.+|.++.+.++
T Consensus 3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 3 NDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGDA 37 (185)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecCc
Confidence 45787776 699999999999999999888876554
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=87.06 E-value=0.66 Score=35.67 Aligned_cols=39 Identities=5% Similarity=0.100 Sum_probs=33.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
....++|+|.|| |..|-..+..|.++||+|.++.+++..
T Consensus 40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~ 78 (179)
T d1ps9a3 40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI 78 (179)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence 444678999985 999999999999999999999987643
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=86.89 E-value=0.43 Score=39.07 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
+++|+|.| +|.-|...+..|.++|++|.++-++...
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~i 37 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDHI 37 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence 57899998 5999999999999999999999876653
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=86.76 E-value=0.22 Score=37.61 Aligned_cols=39 Identities=10% Similarity=0.113 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~ 137 (209)
...++|||.|| |.+++.++..|...| +|.++.|+++++.
T Consensus 16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~ 54 (177)
T d1nvta1 16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAE 54 (177)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHH
Confidence 45678999987 568999999997766 8999999988764
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=86.74 E-value=0.29 Score=38.62 Aligned_cols=66 Identities=11% Similarity=-0.017 Sum_probs=45.4
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhc-CCcEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICP 170 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~-GvDaVIh~ 170 (209)
....++|+|-| -|.+|+++++.|.+.|.+|.+...++.........+.+.+. + .+.+. .||.++-|
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~-----~---~~~~~~~~DI~iPc 90 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVA-----L---EDVLSTPCDVFAPC 90 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECC-----G---GGGGGCCCSEEEEC
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccC-----c---cccccccceeeecc
Confidence 45678999997 89999999999999999999887766554333222333321 1 23343 67877655
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=86.47 E-value=0.45 Score=34.87 Aligned_cols=34 Identities=12% Similarity=0.149 Sum_probs=29.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
++|+|.| +|.-|-..+..|.++|++|.++-+++.
T Consensus 2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~~ 35 (373)
T d1seza1 2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEGK 35 (373)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 6899997 599999999999999999999987654
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=86.01 E-value=0.99 Score=31.17 Aligned_cols=39 Identities=13% Similarity=-0.031 Sum_probs=30.7
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
++...++|||.|+ |.-|.-++..|....-+|..+.|++.
T Consensus 28 ~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 28 ELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred hhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 4566789999985 69999999999887777776666554
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=85.95 E-value=0.5 Score=33.45 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=28.8
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR 134 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~ 134 (209)
++|+|.|| |..|-..+..|.++|+ +|.++-+++.
T Consensus 1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~ 35 (347)
T d1b5qa1 1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH 35 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 46889884 9999999999999996 7999987654
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=85.90 E-value=0.58 Score=36.28 Aligned_cols=65 Identities=14% Similarity=0.040 Sum_probs=53.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhhcCCcEEEEc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
...++++|.| =|.+|+-+++.|...|.+|.+.-.||-++.+..-.+.+++ .+++|++-.|.+|.+
T Consensus 21 laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~--------~~~~a~~~aDi~vTa 85 (163)
T d1v8ba1 21 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVV--------TLDEIVDKGDFFITC 85 (163)
T ss_dssp CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEEC--------CHHHHTTTCSEEEEC
T ss_pred ecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccC--------chhHccccCcEEEEc
Confidence 3456777776 6999999999999999999999999988766655556653 467899999999987
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=85.36 E-value=5 Score=30.88 Aligned_cols=99 Identities=9% Similarity=-0.010 Sum_probs=61.1
Q ss_pred cCCCCeEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcchh-------------------------hhcCCceEEEEc
Q 028418 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM-------------------------ESFGTYVESMAG 149 (209)
Q Consensus 96 ~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~a~-------------------------~~~~~~vevv~G 149 (209)
...+.+|||.| .|.+|++++..|...|.. +++++.+.-... ....+.+++..-
T Consensus 27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~ 105 (247)
T d1jw9b_ 27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 105 (247)
T ss_dssp HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence 34567999999 566999999999999985 555442221100 111234444433
Q ss_pred cC-CCHHHHHHhhcCCcEEEEcChh-----HHHHHHHhCCCCEEEEecccccc
Q 028418 150 DA-SNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQRQRW 196 (209)
Q Consensus 150 Dl-~D~~sL~~AL~GvDaVIh~a~g-----~ll~AA~~aGVkriV~vSS~~Vy 196 (209)
+. .+.......+...|.||.+... .+-++|.+.++. +|+.+..+.+
T Consensus 106 ~~~~~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip-~i~g~~~~~~ 157 (247)
T d1jw9b_ 106 NALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP-LVSGAAIRME 157 (247)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC-EEEEEEEBTE
T ss_pred hhhhhhccccccccccceeeeccchhhhhhhHHHHHHHhCCC-cccccccccc
Confidence 33 3455566778899999987321 256678888876 5555444433
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=85.20 E-value=0.49 Score=38.94 Aligned_cols=90 Identities=9% Similarity=-0.047 Sum_probs=59.6
Q ss_pred CCeEE-EEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh------hhc-CCceEEEEccCCCHH-HHHHhhcCCcEEEE
Q 028418 99 RDAVL-VTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ESF-GTYVESMAGDASNKK-FLKTALRGVRSIIC 169 (209)
Q Consensus 99 ~~~IL-VTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~------~~~-~~~vevv~GDl~D~~-sL~~AL~GvDaVIh 169 (209)
.++|| .-.|+|.++-.+ ..++.+|.++--+++... ... -.+++++.+|..+.- .........|+||.
T Consensus 213 ~~~vlDLycG~G~fsl~L----a~~~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vil 288 (358)
T d1uwva2 213 EDRVLDLFCGMGNFTLPL----ATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL 288 (358)
T ss_dssp TCEEEEESCTTTTTHHHH----HTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE
T ss_pred CceEEEecccccccchhc----cccccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEe
Confidence 34555 778999998654 456789999987664332 111 246899999987633 22233455788876
Q ss_pred c----ChhHHHHHHHhCCCCEEEEecc
Q 028418 170 P----SEGFISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 170 ~----a~g~ll~AA~~aGVkriV~vSS 192 (209)
- ..+.++++..+.++++|||+|-
T Consensus 289 DPPR~G~~~~~~~l~~~~~~~ivYVSC 315 (358)
T d1uwva2 289 DPARAGAAGVMQQIIKLEPIRIVYVSC 315 (358)
T ss_dssp CCCTTCCHHHHHHHHHHCCSEEEEEES
T ss_pred CCCCccHHHHHHHHHHcCCCEEEEEeC
Confidence 4 1223677777778999999995
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=85.18 E-value=0.5 Score=33.34 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=27.4
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCC--cEEEEEeCC
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK 133 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~--~VraLvR~~ 133 (209)
.++|+|.|| |++|-.++..|.+.++ +|+++.+++
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 578999985 9999999999999886 566665554
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=85.02 E-value=0.81 Score=35.14 Aligned_cols=39 Identities=13% Similarity=0.195 Sum_probs=33.2
Q ss_pred ccCCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 95 ~~~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
.....++|+|.|| |..|-..+..|.++|++|+++.++.+
T Consensus 45 ~~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 45 QTKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CCSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 3456678999985 99999999999999999999987664
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=84.46 E-value=2.9 Score=30.69 Aligned_cols=87 Identities=13% Similarity=0.122 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCC----------HHHHHHHHHHHHCCCcEEEEEeCCcchhhhcCCceEEEEccCCCHHHHHHhh--cCCc
Q 028418 98 ARDAVLVTDGDS----------DIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVR 165 (209)
Q Consensus 98 ~~~~ILVTGATG----------fIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~~~~vevv~GDl~D~~sL~~AL--~GvD 165 (209)
..++|||.|+.. +-+.+.+++|.+.|+++..+--||+.....+.. .+-+...=...+.+.+.+ +..|
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~-aD~lYfeplt~e~v~~Ii~~E~p~ 81 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDT-SDRLYFEPVTLEDVLEIVRIEKPK 81 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTS-SSEEECCCCSHHHHHHHHHHHCCS
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhh-cCceEEccCCHHHHHHHHHHhCCC
Confidence 467999999954 678999999999999999998888765433221 233444445666777665 4789
Q ss_pred EEEEcChh-H---HHHHHHhCCCC
Q 028418 166 SIICPSEG-F---ISNAGSLKGVQ 185 (209)
Q Consensus 166 aVIh~a~g-~---ll~AA~~aGVk 185 (209)
.|+..--| + +.....+.||+
T Consensus 82 ~ii~~~GGQtalnla~~L~~~gv~ 105 (121)
T d1a9xa4 82 GVIVQYGGQTPLKLARALEAAGVP 105 (121)
T ss_dssp EEECSSSTHHHHTTHHHHHHTTCC
T ss_pred EEEeehhhhhHHHHHHHHHHcCCc
Confidence 99876211 2 33334566765
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=84.37 E-value=1.2 Score=33.97 Aligned_cols=87 Identities=22% Similarity=0.193 Sum_probs=56.3
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hh---------cCCce------------EEEEccCCCHHH
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES---------FGTYV------------ESMAGDASNKKF 156 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~---------~~~~v------------evv~GDl~D~~s 156 (209)
+|.|- |=|.||+.+.|.|.+++.+|+++. ++.... .+ +...+ .+..-.-.||+.
T Consensus 2 kigIN-GfGRIGR~~~R~l~~~~i~iv~IN-d~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~ 79 (168)
T d2g82a1 2 KVGIN-GFGRIGRQVFRILHSRGVEVALIN-DLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE 79 (168)
T ss_dssp EEEEE-CCSHHHHHHHHHHHHHTCCEEEEE-CSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred EEEEE-CCcHHHHHHHHHHhcCCCEEEEEC-CCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHH
Confidence 45554 479999999999999999998887 333221 11 11111 123344567777
Q ss_pred HHHhhcCCcEEEEcC----hhHHHHHHHhCCCCEEEE
Q 028418 157 LKTALRGVRSIICPS----EGFISNAGSLKGVQHVIL 189 (209)
Q Consensus 157 L~~AL~GvDaVIh~a----~g~ll~AA~~aGVkriV~ 189 (209)
+.=.-.|+|.|+-+. ....++.-.++|++|+|.
T Consensus 80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkVii 116 (168)
T d2g82a1 80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVII 116 (168)
T ss_dssp CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEE
T ss_pred CcccccCCceeEeccccccchHHhhhhhccccceeee
Confidence 776667899999772 112344445679999997
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=83.74 E-value=0.65 Score=36.35 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=28.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 133 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~ 133 (209)
+.|+|.|| |-+|..++..|.++|. +|.++.|+.
T Consensus 2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 46899985 8999999999999995 699998874
|
| >d1sc6a2 c.23.12.1 (A:7-107,A:296-326) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: Formate/glycerate dehydrogenases, substrate-binding domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=83.49 E-value=1.4 Score=32.19 Aligned_cols=28 Identities=18% Similarity=0.159 Sum_probs=20.2
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIK 127 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~Vr 127 (209)
..+++||||.. +-...++.|.++|+.++
T Consensus 2 k~kmKILv~d~---i~~~a~~~L~~~g~~~v 29 (132)
T d1sc6a2 2 KDKIKFLLVEG---VHQKALESLRAAGYTNI 29 (132)
T ss_dssp CSSCCEEECSC---CCHHHHHHHHHTTCCCE
T ss_pred CCCCEEEEECC---CCHHHHHHHHhCCCEEE
Confidence 45789999985 44555677888887654
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=83.01 E-value=0.67 Score=35.05 Aligned_cols=36 Identities=14% Similarity=0.159 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
..++|+|.|| |..|-..+..|.++|++|.++-+++.
T Consensus 29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~ 64 (370)
T d2iida1 29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER 64 (370)
T ss_dssp SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3458999985 89999999999999999999987654
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=83.00 E-value=1.4 Score=34.10 Aligned_cols=69 Identities=14% Similarity=0.190 Sum_probs=43.5
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc-hhhhc---------CCceEEE-EccCCCHHHHHHhhc--CCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESF---------GTYVESM-AGDASNKKFLKTALR--GVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~-a~~~~---------~~~vevv-~GDl~D~~sL~~AL~--GvDa 166 (209)
|+|+|.|. +..|..+++.|+++|++|.+++-.+.+ ....+ ..++.+. ..++.+++.++ .++ .+|.
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~-~i~~~~~Dl 78 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVE-RIAQLSPDV 78 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHH-HHHHTCCSE
T ss_pred CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhh-hhhhhcccc
Confidence 67888855 557999999999999999887732221 11100 1234443 35677766544 343 6788
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
+|+.
T Consensus 79 ii~~ 82 (203)
T d2blna2 79 IFSF 82 (203)
T ss_dssp EEEE
T ss_pred eeee
Confidence 8876
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=82.97 E-value=0.64 Score=34.84 Aligned_cols=65 Identities=9% Similarity=0.069 Sum_probs=39.9
Q ss_pred CeEEEEcCCCHHHHHHHHH-HHH-C----CCcEEEEEeCCcchhhh-------cCCceEEEEccCCCHHHHHHhhcCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILS-LIV-K----RTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRGVRS 166 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~-Ll~-~----G~~VraLvR~~~~a~~~-------~~~~vevv~GDl~D~~sL~~AL~GvDa 166 (209)
|+|.|.|| |.+|....-. |+. . ..+++.++.+++++... ......+... ++ ..++++|+|.
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t--~~---~~~~l~~aDv 74 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS--DT---FEGAVVDAKY 74 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC--SS---HHHHHTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe--cC---cccccCCCCE
Confidence 58999998 5466555433 322 1 35899998888765311 1222333321 22 3679999999
Q ss_pred EEEc
Q 028418 167 IICP 170 (209)
Q Consensus 167 VIh~ 170 (209)
||.+
T Consensus 75 VVit 78 (162)
T d1up7a1 75 VIFQ 78 (162)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9998
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.96 E-value=1 Score=33.16 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCc
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~ 134 (209)
....+|+|.| +|.-|-..+..|.++|++|.++-++..
T Consensus 3 ~~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~r 39 (449)
T d2dw4a2 3 KKTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARDR 39 (449)
T ss_dssp SCCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 3456799998 499999999999999999999976543
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=82.84 E-value=3 Score=32.51 Aligned_cols=93 Identities=13% Similarity=0.200 Sum_probs=57.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCc-EEEEEeCCcc-hhhhcCCceEEEEccC-------------------CCHHHHHH
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRN-AMESFGTYVESMAGDA-------------------SNKKFLKT 159 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~-VraLvR~~~~-a~~~~~~~vevv~GDl-------------------~D~~sL~~ 159 (209)
+|.|.|- |.-|..++..|.+.+.+ |..+.-|... ..........+..|.- .+.+.+.+
T Consensus 2 kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I~~ 80 (194)
T d1w5fa1 2 KIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKIRE 80 (194)
T ss_dssp CEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHHHH
T ss_pred eEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCCcceEEecccccCCCcccccCchhhHhHHHHHHHHHHH
Confidence 6777774 55788999999887743 5444433321 1121122223333321 23567888
Q ss_pred hhcCCcEEEEcC-----hhH-----HHHHHHhCCCCEEEEecccc
Q 028418 160 ALRGVRSIICPS-----EGF-----ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 160 AL~GvDaVIh~a-----~g~-----ll~AA~~aGVkriV~vSS~~ 194 (209)
+++++|.||.++ .|+ +.+.|++.++--+-+++..-
T Consensus 81 ~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g~lvv~ivtlPF 125 (194)
T d1w5fa1 81 VLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVAIVTTPF 125 (194)
T ss_dssp HTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEEECC
T ss_pred HhcCCCeEEEEEecCCCcccchHHHHHHHHHHcCCceEEEEeech
Confidence 899999999882 222 78899999986666665543
|
| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.75 E-value=0.56 Score=34.61 Aligned_cols=95 Identities=11% Similarity=0.041 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC-cchhhhcCCceE-----EEEccCCCHHHHHHhhc------CCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMESFGTYVE-----SMAGDASNKKFLKTALR------GVR 165 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~-~~a~~~~~~~ve-----vv~GDl~D~~sL~~AL~------GvD 165 (209)
..++|.|.+.+|..|..++..+-..|.++-.+.-.. ++....+++... -+.++ .+++.+.++++ ++|
T Consensus 2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~-~~~~~~~~~l~~~~~d~~vd 80 (163)
T d2csua3 2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIAS-ARGEDYYRTAKLLLQDPNVD 80 (163)
T ss_dssp SSSEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTT-CCHHHHHHHHHHHHHSTTCS
T ss_pred CCCeEEEEECChHHHHHHHHHHHHcCCccCCCCHHHHHHHHHhCCCcccCCCcccccCC-CCHHHHHHHHHHHHcCCCcC
Confidence 357899999999999999999999998886554211 112222332221 12233 45666777664 789
Q ss_pred EEEEc----C-h--------hHHHHHHHhCCCCEEEEeccc
Q 028418 166 SIICP----S-E--------GFISNAGSLKGVQHVILLSQR 193 (209)
Q Consensus 166 aVIh~----a-~--------g~ll~AA~~aGVkriV~vSS~ 193 (209)
+|+.. . . ..+++++++.+-++-|+.+.+
T Consensus 81 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpv~~~~~ 121 (163)
T d2csua3 81 MLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFM 121 (163)
T ss_dssp EEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEE
T ss_pred EEEEeeccCCcccccHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 87643 1 1 115666777666665655544
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=82.32 E-value=0.74 Score=35.54 Aligned_cols=31 Identities=13% Similarity=0.097 Sum_probs=27.4
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCC
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~ 133 (209)
|+|.| .|.+|..++..|.++|++|.++.|..
T Consensus 6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 67776 59999999999999999999999754
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=82.10 E-value=0.52 Score=33.54 Aligned_cols=36 Identities=8% Similarity=-0.054 Sum_probs=31.1
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcch
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a 136 (209)
++++|.| .|+||-.++..|.+.|.+|+++.|++...
T Consensus 26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~l 61 (123)
T d1dxla2 26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEIV 61 (123)
T ss_dssp SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccccC
Confidence 4677776 59999999999999999999999887653
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=82.02 E-value=0.67 Score=36.18 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=22.7
Q ss_pred CeEEEEcC-C-CHH--HHHHHHHHHHCCCcEEEEEeC
Q 028418 100 DAVLVTDG-D-SDI--GQMVILSLIVKRTRIKALVKD 132 (209)
Q Consensus 100 ~~ILVTGA-T-GfI--G~~VV~~Ll~~G~~VraLvR~ 132 (209)
++|||++| | |++ ...|+++|.++||+|..+...
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 47787764 3 333 223778888999999988743
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=81.78 E-value=2.7 Score=32.14 Aligned_cols=90 Identities=14% Similarity=0.084 Sum_probs=54.1
Q ss_pred eEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchh---hh---------cCCce------------EEEEccCCCHHH
Q 028418 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES---------FGTYV------------ESMAGDASNKKF 156 (209)
Q Consensus 101 ~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~---~~---------~~~~v------------evv~GDl~D~~s 156 (209)
+|.|-| =|.||+.+.|++++++.+|+++.-...... .+ +...+ .+..-.-.+|+.
T Consensus 2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~ 80 (169)
T d1dssg1 2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN 80 (169)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence 566666 899999999999999999988863222211 11 11111 122233456766
Q ss_pred HHHhhcCCcEEEEcC--hhH--HHHHHHhCCCCEEEEecc
Q 028418 157 LKTALRGVRSIICPS--EGF--ISNAGSLKGVQHVILLSQ 192 (209)
Q Consensus 157 L~~AL~GvDaVIh~a--~g~--ll~AA~~aGVkriV~vSS 192 (209)
+.=.=.|+|.||=|. ..+ -++.-.+.|++|+|. |.
T Consensus 81 i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkVii-sa 119 (169)
T d1dssg1 81 IPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVII-SA 119 (169)
T ss_dssp CCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEE-SS
T ss_pred CCccccCCCEEEecCceEcCHHHHHHHHhcCCceEee-cC
Confidence 554445899999762 111 222223569999876 44
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.47 E-value=0.099 Score=45.88 Aligned_cols=71 Identities=17% Similarity=0.166 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCcchh-------------------------hhcCCc--eEEEE
Q 028418 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAM-------------------------ESFGTY--VESMA 148 (209)
Q Consensus 97 ~~~~~ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~~a~-------------------------~~~~~~--vevv~ 148 (209)
....+|||.|+.| +|..+++.|...|. ++.+++.+.-... ..+.++ ++.+.
T Consensus 35 l~~~kVlvvG~Gg-lG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 113 (426)
T d1yovb1 35 LDTCKVLVIGAGG-LGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF 113 (426)
T ss_dssp HHHCCEEEECSST-THHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred HhcCeEEEECCCH-HHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence 4567899999966 99999999999997 6777764331100 001122 45566
Q ss_pred ccCCCHHHHHHhhcCCcEEEEc
Q 028418 149 GDASNKKFLKTALRGVRSIICP 170 (209)
Q Consensus 149 GDl~D~~sL~~AL~GvDaVIh~ 170 (209)
.++.+.. .+.+++.|.||.+
T Consensus 114 ~~i~~~~--~~~~~~~DlVi~~ 133 (426)
T d1yovb1 114 NKIQDFN--DTFYRQFHIIVCG 133 (426)
T ss_dssp SCGGGBC--HHHHTTCSEEEEC
T ss_pred ccccchH--HHHHHhcchheec
Confidence 6665533 4568899999987
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=81.11 E-value=0.49 Score=34.74 Aligned_cols=32 Identities=13% Similarity=-0.062 Sum_probs=27.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeC
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~ 132 (209)
.+|+|.| .|++|-.++..|.+.|++|.++.+.
T Consensus 4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~ 35 (183)
T d1d7ya1 4 APVVVLG-AGLASVSFVAELRQAGYQGLITVVG 35 (183)
T ss_dssp SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CCEEEEC-ccHHHHHHHHHHHhcCCceEEEEEe
Confidence 3588988 7999999999999999887777653
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=81.06 E-value=0.69 Score=37.23 Aligned_cols=35 Identities=9% Similarity=0.086 Sum_probs=29.9
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
..|+|.| +|..|..+++.|.++|++|.++-++...
T Consensus 2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~i 36 (298)
T d1i8ta1 2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNHI 36 (298)
T ss_dssp EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCCc
Confidence 3578887 5999999999999999999999876653
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=80.92 E-value=0.83 Score=32.78 Aligned_cols=35 Identities=11% Similarity=0.034 Sum_probs=30.7
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcc
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~ 135 (209)
++++|.| .|+||-.++..|...|.+|+.+.|.+.-
T Consensus 27 ~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~i 61 (125)
T d1ojta2 27 GKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDGL 61 (125)
T ss_dssp SEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence 4788887 5999999999999999999999987654
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=80.60 E-value=0.99 Score=36.23 Aligned_cols=36 Identities=6% Similarity=0.186 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHHHCC--CcEEEEEeCCc
Q 028418 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR 134 (209)
Q Consensus 98 ~~~~ILVTGATGfIG~~VV~~Ll~~G--~~VraLvR~~~ 134 (209)
++++|+|.| +|.-|-..+..|+++| ++|+++-|+..
T Consensus 3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 467899997 5999999998998876 69999998764
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=80.30 E-value=5.2 Score=27.60 Aligned_cols=91 Identities=13% Similarity=0.166 Sum_probs=58.5
Q ss_pred CCeEEEEcCCCHHHHHHHHHHHHCCCcEEEEEeCCcchhhhc-CCceEEEEccCCCHH----H----HHHhhcCCcEEEE
Q 028418 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKK----F----LKTALRGVRSIIC 169 (209)
Q Consensus 99 ~~~ILVTGATGfIG~~VV~~Ll~~G~~VraLvR~~~~a~~~~-~~~vevv~GDl~D~~----s----L~~AL~GvDaVIh 169 (209)
+++|||.--.-.+-..+...|-..|++|...+.+...+.... ....+++..|+.=|+ . +++.-..+-.|+.
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~~dliilD~~mp~~~G~e~~~~ir~~~~~~pvi~l 80 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVC 80 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhccCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence 468999999999999988888889999987777766553322 123466777775444 2 2222234555555
Q ss_pred cC--hhHHHHHHHhCCCCEEEE
Q 028418 170 PS--EGFISNAGSLKGVQHVIL 189 (209)
Q Consensus 170 ~a--~g~ll~AA~~aGVkriV~ 189 (209)
.+ .-.....|.+.|+..++.
T Consensus 81 s~~~~~~~~~~a~~~Ga~~yl~ 102 (118)
T d1u0sy_ 81 SAMGQQAMVIEAIKAGAKDFIV 102 (118)
T ss_dssp ECTTCHHHHHHHHHTTCCEEEE
T ss_pred EccCCHHHHHHHHHcCCCEEEE
Confidence 53 222455566778777653
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.13 E-value=2.7 Score=32.92 Aligned_cols=92 Identities=14% Similarity=0.157 Sum_probs=57.9
Q ss_pred EEEEcCCCHHHHHHHHHHHHCCC-cEEEEEeCCc-chhhhcCCceEEEEcc-------------------CCCHHHHHHh
Q 028418 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-NAMESFGTYVESMAGD-------------------ASNKKFLKTA 160 (209)
Q Consensus 102 ILVTGATGfIG~~VV~~Ll~~G~-~VraLvR~~~-~a~~~~~~~vevv~GD-------------------l~D~~sL~~A 160 (209)
|-|.|= |.-|..++..|.+++. .|..+.-|.. ...........+..|. ..+.+.+.++
T Consensus 4 IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~~~I~~~ 82 (198)
T d1rq2a1 4 IKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDAQALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKDEIEEL 82 (198)
T ss_dssp EEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTHHHHHHH
T ss_pred EEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchHHHHhcCCcchhhccccccccCCCcCcChhhhHhhHHHHHHHHHHH
Confidence 444443 3458999999999875 3555554332 1112222223333332 2456788899
Q ss_pred hcCCcEEEEcC-----hhH-----HHHHHHhCCCCEEEEecccc
Q 028418 161 LRGVRSIICPS-----EGF-----ISNAGSLKGVQHVILLSQRQ 194 (209)
Q Consensus 161 L~GvDaVIh~a-----~g~-----ll~AA~~aGVkriV~vSS~~ 194 (209)
|+++|.||.++ .|+ +.+.|++.|+--+-+++..-
T Consensus 83 l~~~d~vfi~AGlGGgTGtGaaPviA~iake~g~l~v~ivt~PF 126 (198)
T d1rq2a1 83 LRGADMVFVTAGEGGGTGTGGAPVVASIARKLGALTVGVVTRPF 126 (198)
T ss_dssp HTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHTCEEEEEEEECC
T ss_pred hcCCCEEEEEEecCCCCCcchHHHHHHHHHHcCCcEEEEEecCh
Confidence 99999999882 222 78899999987777776653
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=80.09 E-value=0.17 Score=37.90 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=23.0
Q ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCcE
Q 028418 100 DAVLVTDGDSDIGQMVILSLIVKRTRI 126 (209)
Q Consensus 100 ~~ILVTGATGfIG~~VV~~Ll~~G~~V 126 (209)
|+|+|.|| |-+|...+.+|.++|++|
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence 57999985 999999999999999864
|