Citrus Sinensis ID: 028423

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYLKKLLFNLARDSLSSFSFYSIIITFFSFSP
ccccccccccccccccEEEEEccccEEEEEEEccHHHHHHcccccccEEEEcHHHHHHHHHHHHHcccccccccEEEcccHHHHHHHHHHHHccccEEEEEEEEccHHHHHHHHHHHHcccccccEEEcccccEEEEEEEcccccEEEEEccccccccccccccHHHHccccEEEEEcccHHHHHHHHHHHHHccccEEEEEEEEEEcc
ccccccccccccccccEEEEEccHHHHHEEEcccHHHHHHccccccccEEccHHHHHHHHHHHHHHHHHccccccEccccHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHcccccccccccccccEEEEEEEcccccccccccccccccccHHHccHHHHHHccEEEEHHHHHHHHHHHHHHHHHHccccccccEEEEccc
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSlldqipgerggsiPVAIEELEHILSEVKthildepspiktiaggsvtntirglsvgfgvpcgligaygddqqgqlFVSNmqfsgvdvsrlrmkrgptgqcvclvdasgnrtmrpclsNAVKIQADELIAEDVKGSKVLHLALYLKKLLFNLArdslssfsfYSIIITFFSFSP
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKthildepspiktiAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSrlrmkrgptGQCVCLvdasgnrtmRPCLSNAVKIQADELIAEDVKGSKVLHLALYLKKLLFNLARDSLSSFSFYSIIITFFSFSP
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSkvlhlalylkkllfnlARDslssfsfysiiitffsfsP
*****LIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYLKKLLFNLARDSLSSFSFYSIIITFFSF**
****************LILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILD*PSP**TIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYLKKLLFNLARDSLSSFSFYSIIITFFSFSP
MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYLKKLLFNLARDSLSSFSFYSIIITFFSFSP
***********ASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYLKKLLFNLARDSLSSFSFYSIIITFFSFSP
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHi
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGAEHLIINREASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYLKKLLFNLARDSLSSFSFYSIIITFFSFSP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query209 2.2.26 [Sep-21-2011]
P0AEW6 434 Inosine-guanosine kinase N/A no 0.751 0.361 0.259 0.0004
P0AEW7 434 Inosine-guanosine kinase yes no 0.751 0.361 0.259 0.0004
P0AEW8 434 Inosine-guanosine kinase N/A no 0.751 0.361 0.259 0.0004
>sp|P0AEW6|INGK_ECOLI Inosine-guanosine kinase OS=Escherichia coli (strain K12) GN=gsk PE=1 SV=1 Back     alignment and function desciption
 Score = 45.1 bits (105), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 20/177 (11%)

Query: 13  SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPS 72
           + AA ++G+    L+D  A+VD   +++     G S+ +  +  E +  E+K   L    
Sbjct: 31  TSAAWVVGID-QTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNL---- 85

Query: 73  PIKTIAGGSVTNTIRGLSVG-------FGVPCG--LIGAYGDDQQGQLFVSNMQFSGVDV 123
                AGG++ NT+   SV         GV C    IG+Y        ++ N   S  D+
Sbjct: 86  ITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGSYA-----YRYLCNTS-SRTDL 139

Query: 124 SRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYL 180
           + L+   GP G+C  L+  SG RT      +  +++A+ +  + + G+  L L  YL
Sbjct: 140 NYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYL 196

Escherichia coli (strain K12) (taxid: 83333)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 7EC: 3
>sp|P0AEW7|INGK_ECOL6 Inosine-guanosine kinase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=gsk PE=3 SV=1 Back     alignment and function description
>sp|P0AEW8|INGK_ECO57 Inosine-guanosine kinase OS=Escherichia coli O157:H7 GN=gsk PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
255538696 368 Adenosine kinase, putative [Ricinus comm 0.832 0.472 0.752 8e-70
118486455 368 unknown [Populus trichocarpa] 0.875 0.497 0.692 9e-67
224066185 348 predicted protein [Populus trichocarpa] 0.913 0.548 0.658 2e-66
224082890 348 predicted protein [Populus trichocarpa] 0.799 0.479 0.724 1e-64
359492147 386 PREDICTED: uncharacterized sugar kinase 0.990 0.536 0.606 1e-63
302142517 425 unnamed protein product [Vitis vinifera] 0.990 0.487 0.606 2e-63
312281597 355 unnamed protein product [Thellungiella h 0.784 0.461 0.734 4e-63
225458235 350 PREDICTED: uncharacterized sugar kinase 0.837 0.5 0.686 7e-63
297844934 355 pfkB-type carbohydrate kinase family pro 0.770 0.453 0.742 3e-62
449469961 365 PREDICTED: uncharacterized sugar kinase 0.875 0.501 0.651 8e-62
>gi|255538696|ref|XP_002510413.1| Adenosine kinase, putative [Ricinus communis] gi|223551114|gb|EEF52600.1| Adenosine kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  268 bits (686), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 137/182 (75%), Positives = 150/182 (82%), Gaps = 8/182 (4%)

Query: 1   MGAEHLIINRE-----ASQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEE 55
           MGAE L  N E          L+LGLQPAALIDHVARVDWSLLDQIPG+RGGSIPVAIEE
Sbjct: 1   MGAEALPRNIEIAPAAPPPPPLVLGLQPAALIDHVARVDWSLLDQIPGDRGGSIPVAIEE 60

Query: 56  LEHILSEVKTHILDEP---SPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLF 112
           LEHIL EV+TH++  P   SPIKTIAGGSV NTIRGLS GFGV CG+IGAYGDD +G+LF
Sbjct: 61  LEHILREVETHMITSPDNASPIKTIAGGSVANTIRGLSAGFGVSCGIIGAYGDDDEGKLF 120

Query: 113 VSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK 172
           VSNM F GV++SRLR K GPTGQCVCLVDA GNRTMRPCLS+AVK+QA+ELI ED KGSK
Sbjct: 121 VSNMGFCGVNLSRLRRKIGPTGQCVCLVDALGNRTMRPCLSSAVKVQANELINEDFKGSK 180

Query: 173 VL 174
            L
Sbjct: 181 WL 182

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|118486455|gb|ABK95067.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224066185|ref|XP_002302023.1| predicted protein [Populus trichocarpa] gi|222843749|gb|EEE81296.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224082890|ref|XP_002306879.1| predicted protein [Populus trichocarpa] gi|222856328|gb|EEE93875.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359492147|ref|XP_002281978.2| PREDICTED: uncharacterized sugar kinase slr0537-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302142517|emb|CBI19720.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|312281597|dbj|BAJ33664.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|225458235|ref|XP_002281985.1| PREDICTED: uncharacterized sugar kinase slr0537-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297844934|ref|XP_002890348.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297336190|gb|EFH66607.1| pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449469961|ref|XP_004152687.1| PREDICTED: uncharacterized sugar kinase slr0537-like [Cucumis sativus] gi|449520038|ref|XP_004167041.1| PREDICTED: uncharacterized sugar kinase slr0537-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
TAIR|locus:2013094 355 AT1G19600 [Arabidopsis thalian 0.746 0.439 0.740 8.4e-58
TIGR_CMR|DET_0711 328 DET_0711 "carbohydrate kinase, 0.459 0.292 0.368 7.4e-09
TAIR|locus:2013094 AT1G19600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 117/158 (74%), Positives = 133/158 (84%)

Query:    14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSP 73
             +A L+LGLQPAALID+VA VDWSLLDQIPG+RGGSI V  +ELEH+L E+  HI    +P
Sbjct:    11 EAPLVLGLQPAALIDNVAPVDWSLLDQIPGDRGGSIAVQKDELEHMLKELDAHI--SVAP 68

Query:    74 IKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPT 133
             +K +AGGSVTNT+RGLSVGFGV  G+IGAYGDD+QGQLFVSNM FSGV +SRLR K+G T
Sbjct:    69 LKKMAGGSVTNTVRGLSVGFGVATGIIGAYGDDEQGQLFVSNMGFSGVSISRLRKKKGST 128

Query:   134 GQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGS 171
              QCVCLVD SGNRTMRPCLS+AVKIQADEL  ED  GS
Sbjct:   129 AQCVCLVDDSGNRTMRPCLSSAVKIQADELSKEDFTGS 166
GO:0005737 "cytoplasm" evidence=ISM
GO:0016301 "kinase activity" evidence=ISS
TIGR_CMR|DET_0711 DET_0711 "carbohydrate kinase, PfkB family" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.II.1879.1
pfkB-type carbohydrate kinase family protein (348 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
PLN02379 367 PLN02379, PLN02379, pfkB-type carbohydrate kinase 1e-107
cd01168 312 cd01168, adenosine_kinase, Adenosine kinase (AK) c 2e-36
COG0524 311 COG0524, RbsK, Sugar kinases, ribokinase family [C 7e-11
pfam00294 298 pfam00294, PfkB, pfkB family carbohydrate kinase 1e-10
cd01166 294 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg 2e-10
PLN02813 426 PLN02813, PLN02813, pfkB-type carbohydrate kinase 5e-08
cd01942 279 cd01942, ribokinase_group_A, Ribokinase-like subgr 5e-07
PRK09813 260 PRK09813, PRK09813, fructoselysine 6-kinase; Provi 1e-05
cd01167 295 cd01167, bac_FRK, Fructokinases (FRKs) mainly from 4e-05
cd01945 284 cd01945, ribokinase_group_B, Ribokinase-like subgr 7e-05
PTZ00247 345 PTZ00247, PTZ00247, adenosine kinase; Provisional 1e-04
cd01940 264 cd01940, Fructoselysine_kinase_like, Fructoselysin 2e-04
PTZ00292 326 PTZ00292, PTZ00292, ribokinase; Provisional 4e-04
PRK15074 434 PRK15074, PRK15074, inosine/guanosine kinase; Prov 4e-04
PLN02548 332 PLN02548, PLN02548, adenosine kinase 4e-04
cd01174 292 cd01174, ribokinase, Ribokinase catalyses the phos 9e-04
>gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein Back     alignment and domain information 
 Score =  310 bits (797), Expect = e-107
 Identities = 129/180 (71%), Positives = 144/180 (80%), Gaps = 5/180 (2%)

Query: 15  AALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHIL---DEP 71
             L+LGLQP AL+DHVARVDWSLLDQIPG+RGGSI V IEELEHIL EV  HIL   D+ 
Sbjct: 19  PPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDL 78

Query: 72  SPIKTIAGGSVTNTIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRG 131
           SPIKT+AGGSV NTIRGLS GFGV  G+IGA GDD+QG+LFVSNM FSGVD+SRLR K+G
Sbjct: 79  SPIKTMAGGSVANTIRGLSAGFGVSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAKKG 138

Query: 132 PTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK--VLHLALYLKKLLFNLAR 189
           PT QCVCLVDA GNRTMRPCLS+AVK+QADEL  ED KGSK  VL    Y  +++    R
Sbjct: 139 PTAQCVCLVDALGNRTMRPCLSSAVKLQADELTKEDFKGSKWLVLRYGFYNLEVIEAAIR 198

Length = 367
>gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase Back     alignment and domain information
>gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A Back     alignment and domain information
>gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional Back     alignment and domain information
>gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B Back     alignment and domain information
>gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional Back     alignment and domain information
>gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like Back     alignment and domain information
>gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional Back     alignment and domain information
>gnl|CDD|185033 PRK15074, PRK15074, inosine/guanosine kinase; Provisional Back     alignment and domain information
>gnl|CDD|178163 PLN02548, PLN02548, adenosine kinase Back     alignment and domain information
>gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 209
PRK15074 434 inosine/guanosine kinase; Provisional 99.97
PLN02379 367 pfkB-type carbohydrate kinase family protein 99.96
PLN02813 426 pfkB-type carbohydrate kinase family protein 99.96
PTZ00247 345 adenosine kinase; Provisional 99.93
cd01168 312 adenosine_kinase Adenosine kinase (AK) catalyzes t 99.93
PRK11142 306 ribokinase; Provisional 99.91
cd01942 279 ribokinase_group_A Ribokinase-like subgroup A. Fou 99.9
cd01174 292 ribokinase Ribokinase catalyses the phosphorylatio 99.9
cd01939 290 Ketohexokinase Ketohexokinase (fructokinase, KHK) 99.9
PTZ00292 326 ribokinase; Provisional 99.9
PLN02323 330 probable fructokinase 99.9
cd01944 289 YegV_kinase_like YegV-like sugar kinase. Found onl 99.89
PLN02967 581 kinase 99.89
PLN02543 496 pfkB-type carbohydrate kinase family protein 99.89
COG0524 311 RbsK Sugar kinases, ribokinase family [Carbohydrat 99.88
cd01947 265 Guanosine_kinase_like Guanosine kinase-like sugar 99.87
cd01945 284 ribokinase_group_B Ribokinase-like subgroup B. Fou 99.87
PLN02548 332 adenosine kinase 99.86
PLN02341 470 pfkB-type carbohydrate kinase family protein 99.86
KOG2854 343 consensus Possible pfkB family carbohydrate kinase 99.86
PRK09850 313 pseudouridine kinase; Provisional 99.86
TIGR02152 293 D_ribokin_bact ribokinase. This model describes ri 99.85
cd01166 294 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho 99.85
cd01940 264 Fructoselysine_kinase_like Fructoselysine kinase-l 99.85
KOG2855 330 consensus Ribokinase [Carbohydrate transport and m 99.85
cd01167 295 bac_FRK Fructokinases (FRKs) mainly from bacteria 99.84
cd01941 288 YeiC_kinase_like YeiC-like sugar kinase. Found in 99.84
TIGR03828 304 pfkB 1-phosphofructokinase. This enzyme acts in co 99.84
PRK09813 260 fructoselysine 6-kinase; Provisional 99.83
PRK09954 362 putative kinase; Provisional 99.82
cd01172 304 RfaE_like RfaE encodes a bifunctional ADP-heptose 99.81
PF00294 301 PfkB: pfkB family carbohydrate kinase; InterPro: I 99.8
TIGR02198 315 rfaE_dom_I rfaE bifunctional protein, domain I. Rf 99.8
PRK09513 312 fruK 1-phosphofructokinase; Provisional 99.8
PRK09434 304 aminoimidazole riboside kinase; Provisional 99.8
PRK10294 309 6-phosphofructokinase 2; Provisional 99.79
cd01164 289 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 99.77
PRK13508 309 tagatose-6-phosphate kinase; Provisional 99.77
PRK11316 473 bifunctional heptose 7-phosphate kinase/heptose 1- 99.77
cd01943 328 MAK32 MAK32 kinase. MAK32 is a protein found prima 99.76
TIGR01231 309 lacC tagatose-6-phosphate kinase. This enzyme is p 99.76
TIGR03168 303 1-PFK hexose kinase, 1-phosphofructokinase family. 99.76
cd01937 254 ribokinase_group_D Ribokinase-like subgroup D. Fou 99.71
KOG2947 308 consensus Carbohydrate kinase [Carbohydrate transp 99.68
PLN02630 335 pfkB-type carbohydrate kinase family protein 99.65
cd01946 277 ribokinase_group_C Ribokinase-like subgroup C. Fou 99.54
COG2870 467 RfaE ADP-heptose synthase, bifunctional sugar kina 99.43
COG1105 310 FruK Fructose-1-phosphate kinase and related fruct 99.38
cd00287196 ribokinase_pfkB_like ribokinase/pfkB superfamily: 99.14
KOG3009 614 consensus Predicted carbohydrate kinase, contains 97.7
PRK14039 453 ADP-dependent glucokinase; Provisional 95.28
PRK06702 432 O-acetylhomoserine aminocarboxypropyltransferase; 88.49
cd01938 445 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and 86.68
PRK08133 390 O-succinylhomoserine sulfhydrylase; Validated 84.19
PRK05967 395 cystathionine beta-lyase; Provisional 83.69
PRK08114 395 cystathionine beta-lyase; Provisional 81.96
>PRK15074 inosine/guanosine kinase; Provisional Back     alignment and domain information 
Probab=99.97  E-value=1.5e-29  Score=227.38  Aligned_cols=183  Identities=21%  Similarity=0.336  Sum_probs=161.6

Q ss_pred             CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423           13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG   92 (209)
Q Consensus        13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r   92 (209)
                      ..+-+|+++| |++||+.+.|+++||+++..++|.+++++.++..+|+++|..+.    ......+||+++|+|++++ |
T Consensus        31 ~~~~~v~g~G-NaLvDi~~~v~d~fL~~~~l~kg~m~li~~e~~~~l~~~l~~~~----~~~~~~~GGsaaNtA~~lA-r  104 (434)
T PRK15074         31 TSRTYIVGID-QTLVDIEAKVDDEFLERYGLSKGHSLVIEDDVAEALYQELKQNN----LITHEFAGGTIGNTLHNYS-V  104 (434)
T ss_pred             CCCCcEEEeC-CceeeEEEeeCHHHHHHcCCCCCceEecCHHHHHHHHHHHhhcc----ccccccCCCHHHHHHHHHH-H
Confidence            3456799999 99999999999999999999999999999999999999886421    1146679999999999999 8


Q ss_pred             cC-CCeEEEEEecCC-hhHHHHHHHHH--hCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhc
Q 028423           93 FG-VPCGLIGAYGDD-QQGQLFVSNMQ--FSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDV  168 (209)
Q Consensus        93 LG-~~~~lig~VG~D-~~G~~i~~~L~--~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i  168 (209)
                      || .++.|+|+||+| .+|+++++.|+  +.||+++++...+++|+.|+++++++|+|+|+++++++..+++++++.+.+
T Consensus       105 LGG~~~~fig~VGdDd~~G~~~~~~L~~~~~GVdt~~v~~~~~~TG~~~VlV~~dGeRt~~t~~GA~~~Lt~edld~~~i  184 (434)
T PRK15074        105 LADDRSVLLGVMSSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLISEDGERTFAISPGHMNQLRPESIPEDVI  184 (434)
T ss_pred             cCCCCeEEEEEeCCCHHHHHHHHHHhhhhhCCccCcceEEcCCCCEEEEEEECCCCCEEEEEecChhhcCChhHCCHhHh
Confidence            96 999999999999 79999999997  689999998766668999999999999999999999999999999988889


Q ss_pred             CCccEEEEeCCccH------------HHHHHHHhcCCeEEEecCc
Q 028423          169 KGSKVLHLALYLKK------------LLFNLARDSLSSFSFYSII  201 (209)
Q Consensus       169 ~~~d~v~i~g~~~~------------~~~~~ar~~g~~vsfd~~~  201 (209)
                      ++++++|++||.+.            ..++.||++|++|+||-..
T Consensus       185 ~~a~ilyl~Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~  229 (434)
T PRK15074        185 AGASALVLTAYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGT  229 (434)
T ss_pred             ccCCEEEEeeeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcc
Confidence            99999999998632            2456789999999999754

>PLN02379 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PLN02813 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>PTZ00247 adenosine kinase; Provisional Back     alignment and domain information
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor Back     alignment and domain information
>PRK11142 ribokinase; Provisional Back     alignment and domain information
>cd01942 ribokinase_group_A Ribokinase-like subgroup A Back     alignment and domain information
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP Back     alignment and domain information
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose Back     alignment and domain information
>PTZ00292 ribokinase; Provisional Back     alignment and domain information
>PLN02323 probable fructokinase Back     alignment and domain information
>cd01944 YegV_kinase_like YegV-like sugar kinase Back     alignment and domain information
>PLN02967 kinase Back     alignment and domain information
>PLN02543 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases Back     alignment and domain information
>cd01945 ribokinase_group_B Ribokinase-like subgroup B Back     alignment and domain information
>PLN02548 adenosine kinase Back     alignment and domain information
>PLN02341 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09850 pseudouridine kinase; Provisional Back     alignment and domain information
>TIGR02152 D_ribokin_bact ribokinase Back     alignment and domain information
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) Back     alignment and domain information
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like Back     alignment and domain information
>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate Back     alignment and domain information
>cd01941 YeiC_kinase_like YeiC-like sugar kinase Back     alignment and domain information
>TIGR03828 pfkB 1-phosphofructokinase Back     alignment and domain information
>PRK09813 fructoselysine 6-kinase; Provisional Back     alignment and domain information
>PRK09954 putative kinase; Provisional Back     alignment and domain information
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose Back     alignment and domain information
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases Back     alignment and domain information
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I Back     alignment and domain information
>PRK09513 fruK 1-phosphofructokinase; Provisional Back     alignment and domain information
>PRK09434 aminoimidazole riboside kinase; Provisional Back     alignment and domain information
>PRK10294 6-phosphofructokinase 2; Provisional Back     alignment and domain information
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases Back     alignment and domain information
>PRK13508 tagatose-6-phosphate kinase; Provisional Back     alignment and domain information
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional Back     alignment and domain information
>cd01943 MAK32 MAK32 kinase Back     alignment and domain information
>TIGR01231 lacC tagatose-6-phosphate kinase Back     alignment and domain information
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family Back     alignment and domain information
>cd01937 ribokinase_group_D Ribokinase-like subgroup D Back     alignment and domain information
>KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02630 pfkB-type carbohydrate kinase family protein Back     alignment and domain information
>cd01946 ribokinase_group_C Ribokinase-like subgroup C Back     alignment and domain information
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group Back     alignment and domain information
>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] Back     alignment and domain information
>PRK14039 ADP-dependent glucokinase; Provisional Back     alignment and domain information
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated Back     alignment and domain information
>cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) Back     alignment and domain information
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated Back     alignment and domain information
>PRK05967 cystathionine beta-lyase; Provisional Back     alignment and domain information
>PRK08114 cystathionine beta-lyase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
4e3a_A 352 Sugar kinase protein; structural genomics, protein 3e-40
2abs_A 383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 4e-25
3otx_A 347 Adenosine kinase, putative; AP5A, transferase-tran 6e-24
3loo_A 365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 1e-22
1bx4_A 345 Protein (adenosine kinase); human adenosine kinase 1e-21
2hlz_A 312 Ketohexokinase; non-protein kinase, creatine kinas 6e-21
2pkf_A 334 Adenosine kinase; transferase, S genomics, TB stru 3e-10
2c4e_A 302 Sugar kinase MJ0406; transferase, nucleoside kinas 6e-10
2qhp_A 296 Fructokinase; NP_810670.1, PFKB family carbohydrat 2e-09
3ljs_A 338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 3e-09
3iq0_A 330 Putative ribokinase II; transferase,kinase,SAD,rib 5e-09
1v1a_A 309 2-keto-3-deoxygluconate kinase; ATP, structural ge 1e-08
3h49_A 325 Ribokinase; transferase,PFKB family,sugar kinase Y 1e-08
3pl2_A 319 Sugar kinase, ribokinase family; PFKB PFAM motif, 2e-08
1tyy_A 339 Putative sugar kinase; ribokinase fold, alpha/beta 4e-08
1vk4_A 298 PFKB carbohydrate kinase TM0415; structural genomi 7e-08
2qcv_A 332 Putative 5-dehydro-2-deoxygluconokinase; structura 8e-08
3ewm_A 313 Uncharacterized sugar kinase PH1459; carbohydrate 1e-07
4du5_A 336 PFKB; structural genomics, PSI-biology, NEW YORK s 1e-07
2dcn_A 311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 4e-07
2rbc_A 343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 4e-07
3kd6_A 313 Carbohydrate kinase, PFKB family; nucleoside kinas 1e-06
3bf5_A 306 Ribokinase related protein; 10640157, putative rib 1e-06
2v78_A 313 Fructokinase; transferase, PFKB family carbohydrat 2e-06
2nwh_A 317 AGR_C_3442P, carbohydrate kinase; structural genom 2e-06
3go6_A 310 Ribokinase RBSK; phosphofructokinase, carbohydrate 4e-06
2afb_A 351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 5e-06
3ikh_A 299 Carbohydrate kinase; transferase,kinase,SAD,ribose 9e-06
3ktn_A 346 Carbohydrate kinase, PFKB family; PFKB family,ribo 1e-05
3hj6_A 327 Fructokinase, FRK; fructose, transferase, carbohyd 2e-05
3lhx_A 319 Ketodeoxygluconokinase; structural genomics, PSI-2 4e-05
3b1n_A 326 Ribokinase, putative; rossmann fold, ATP binding, 4e-05
3kzh_A 328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 6e-05
2fv7_A 331 Ribokinase; structural genomics, structural genomi 2e-04
1rkd_A 309 Ribokinase; carbohydrate kinase, ribose, nucleotid 4e-04
3ry7_A 304 Ribokinase; transferase; 2.15A {Staphylococcus aur 4e-04
4e69_A 328 2-dehydro-3-deoxygluconokinase; putative sugar kin 4e-04
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 Back     alignment and structure
 Score =  139 bits (352), Expect = 3e-40
 Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 10/157 (6%)

Query: 25  ALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTN 84
           A++D ++R +   L      +     +  E  E + S +         P    +GGS  N
Sbjct: 34  AIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMG--------PALEASGGSAGN 85

Query: 85  TIRGLSVGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVD-VSRLRMKRGPTGQCVCLVDAS 143
           T  G++   G      G    DQ G +F  +++  GV   ++ +    PT + +  V   
Sbjct: 86  TAAGVA-NLGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTED 144

Query: 144 GNRTMRPCLSNAVKIQADELIAEDVKGSKVLHLALYL 180
           G R+M   L   V++  +++ A+ V  +KV +   YL
Sbjct: 145 GERSMNTYLGACVELGPEDVEADVVADAKVTYFEGYL 181
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
4e3a_A 352 Sugar kinase protein; structural genomics, protein 99.97
3uq6_A 372 Adenosine kinase, putative; ribokinase, transferas 99.96
3otx_A 347 Adenosine kinase, putative; AP5A, transferase-tran 99.95
3vas_A 370 Putative adenosine kinase; ribokinase, enzyme, tra 99.95
3loo_A 365 Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad 99.94
2rbc_A 343 Sugar kinase, AGR_C_4560P; ribokinase family, ATP- 99.93
3go6_A 310 Ribokinase RBSK; phosphofructokinase, carbohydrate 99.93
3ikh_A 299 Carbohydrate kinase; transferase,kinase,SAD,ribose 99.92
3ry7_A 304 Ribokinase; transferase; 2.15A {Staphylococcus aur 99.92
3ljs_A 338 Fructokinase; fructokianse, PSI2, NYSGXRC, structu 99.92
1rkd_A 309 Ribokinase; carbohydrate kinase, ribose, nucleotid 99.92
1bx4_A 345 Protein (adenosine kinase); human adenosine kinase 99.91
2hlz_A 312 Ketohexokinase; non-protein kinase, creatine kinas 99.91
2fv7_A 331 Ribokinase; structural genomics, structural genomi 99.91
2c4e_A 302 Sugar kinase MJ0406; transferase, nucleoside kinas 99.91
1vm7_A 311 Ribokinase; TM0960, structural genomics, JCSG, pro 99.91
2abs_A 383 Adenosine kinase, AK; ribokinase fold, alpha/beta, 99.9
3hj6_A 327 Fructokinase, FRK; fructose, transferase, carbohyd 99.9
3h49_A 325 Ribokinase; transferase,PFKB family,sugar kinase Y 99.89
4du5_A 336 PFKB; structural genomics, PSI-biology, NEW YORK s 99.89
3iq0_A 330 Putative ribokinase II; transferase,kinase,SAD,rib 99.89
3kzh_A 328 Probable sugar kinase; NYSGXRC, PSI-II, protein st 99.89
2nwh_A 317 AGR_C_3442P, carbohydrate kinase; structural genom 99.89
1v1a_A 309 2-keto-3-deoxygluconate kinase; ATP, structural ge 99.89
3ktn_A 346 Carbohydrate kinase, PFKB family; PFKB family,ribo 99.89
3lhx_A 319 Ketodeoxygluconokinase; structural genomics, PSI-2 99.89
2qcv_A 332 Putative 5-dehydro-2-deoxygluconokinase; structura 99.89
2pkf_A 334 Adenosine kinase; transferase, S genomics, TB stru 99.88
3pl2_A 319 Sugar kinase, ribokinase family; PFKB PFAM motif, 99.88
3bf5_A 306 Ribokinase related protein; 10640157, putative rib 99.88
3b1n_A 326 Ribokinase, putative; rossmann fold, ATP binding, 99.88
3ewm_A 313 Uncharacterized sugar kinase PH1459; carbohydrate 99.87
4e69_A 328 2-dehydro-3-deoxygluconokinase; putative sugar kin 99.87
3ie7_A 320 LIN2199 protein; phosphofructokinases, transferase 99.87
2ajr_A 331 Sugar kinase, PFKB family; TM0828, possible 1-phos 99.87
4gm6_A 351 PFKB family carbohydrate kinase; enzyme function i 99.86
1tyy_A 339 Putative sugar kinase; ribokinase fold, alpha/beta 99.86
3umo_A 309 6-phosphofructokinase isozyme 2; glycolysis, trans 99.86
2dcn_A 311 Hypothetical fructokinase; 2-keto-3-deoxygluconate 99.86
3cqd_A 309 6-phosphofructokinase isozyme 2; phosphofructokina 99.86
2v78_A 313 Fructokinase; transferase, PFKB family carbohydrat 99.85
2f02_A 323 Tagatose-6-phosphate kinase; LACC, structural geno 99.84
2jg1_A 330 Tagatose-6-phosphate kinase; phosphoryl transfer, 99.83
4e84_A 352 D-beta-D-heptose 7-phosphate kinase; LPS-heptose b 99.83
2qhp_A 296 Fructokinase; NP_810670.1, PFKB family carbohydrat 99.81
2abq_A 306 Fructose 1-phosphate kinase; dimer, structural gen 99.8
2jg5_A 306 Fructose 1-phosphate kinase; 1-phosphofructokinase 99.8
2afb_A 351 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- 99.79
3kd6_A 313 Carbohydrate kinase, PFKB family; nucleoside kinas 99.72
1vk4_A 298 PFKB carbohydrate kinase TM0415; structural genomi 99.69
2yxt_A 312 Pyridoxal kinase; beta sheet with alpha helix, met 96.81
2ddm_A 283 Pyridoxine kinase; pyridoxal kinase, ribokinase, p 95.31
3drw_A 474 ADP-specific phosphofructokinase; AMP, GLYC kinase 93.88
1gc5_A 467 ADP-dependent glucokinase; ALFA/beta sandwichs, in 92.94
1l2l_A 457 ADP-dependent glucokinase; ADP glucokinase APO, tr 91.85
1ua4_A 455 Glucokinase, ADP-dependent glucokinase; transferas 89.53
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Back     alignment and structure
Probab=99.97  E-value=2.3e-29  Score=219.46  Aligned_cols=177  Identities=22%  Similarity=0.296  Sum_probs=161.4

Q ss_pred             CCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHhc
Q 028423           14 QAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVGF   93 (209)
Q Consensus        14 ~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~rL   93 (209)
                      ++++|+|+| ++++|+++++++.+++++..++|.+++++.+..+++++++.        +....+||+++|+|++|+ ||
T Consensus        24 ~~~~v~~iG-~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~--------~~~~~~GG~~~N~A~~la-~L   93 (352)
T 4e3a_A           24 TRFDVLTVG-NAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMG--------PALEASGGSAGNTAAGVA-NL   93 (352)
T ss_dssp             CSEEEEEEC-CCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSC--------SCEEEECCHHHHHHHHHH-HH
T ss_pred             CcccEEEEC-CceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhh--------hccEecCCHHHHHHHHHH-Hc
Confidence            468999999 99999999999999999989999999999999999998753        568899999999999999 89


Q ss_pred             CCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecC-CCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcCCcc
Q 028423           94 GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKR-GPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVKGSK  172 (209)
Q Consensus        94 G~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~-~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~~~d  172 (209)
                      |.++.|+|+||+|.+|+++++.|++.||+++++.+.+ .+|+.|+++++++|+|+++.++++...+++++++.+.+++++
T Consensus        94 G~~~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~~~~~~~~  173 (352)
T 4e3a_A           94 GGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEADVVADAK  173 (352)
T ss_dssp             TCCEEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCHHHHHTEE
T ss_pred             CCCeEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCHHHHhhCC
Confidence            9999999999999999999999999999999998765 489999999999999999999998889999999888899999


Q ss_pred             EEEEeCCcc---------HHHHHHHHhcCCeEEEecC
Q 028423          173 VLHLALYLK---------KLLFNLARDSLSSFSFYSI  200 (209)
Q Consensus       173 ~v~i~g~~~---------~~~~~~ar~~g~~vsfd~~  200 (209)
                      ++|++||++         ...++.||++|++|+||..
T Consensus       174 ~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~  210 (352)
T 4e3a_A          174 VTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLS  210 (352)
T ss_dssp             EEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred             EEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence            999999863         2345678999999999974
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* Back     alignment and structure
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Back     alignment and structure
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* Back     alignment and structure
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Back     alignment and structure
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Back     alignment and structure
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Back     alignment and structure
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Back     alignment and structure
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Back     alignment and structure
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* Back     alignment and structure
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Back     alignment and structure
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Back     alignment and structure
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Back     alignment and structure
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Back     alignment and structure
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Back     alignment and structure
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Back     alignment and structure
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Back     alignment and structure
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Back     alignment and structure
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Back     alignment and structure
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A Back     alignment and structure
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Back     alignment and structure
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Back     alignment and structure
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Back     alignment and structure
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Back     alignment and structure
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Back     alignment and structure
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Back     alignment and structure
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Back     alignment and structure
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 Back     alignment and structure
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Back     alignment and structure
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Back     alignment and structure
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Back     alignment and structure
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Back     alignment and structure
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Back     alignment and structure
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} Back     alignment and structure
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Back     alignment and structure
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* Back     alignment and structure
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Back     alignment and structure
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Back     alignment and structure
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Back     alignment and structure
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Back     alignment and structure
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Back     alignment and structure
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* Back     alignment and structure
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Back     alignment and structure
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Back     alignment and structure
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Back     alignment and structure
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Back     alignment and structure
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* Back     alignment and structure
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* Back     alignment and structure
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A Back     alignment and structure
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 Back     alignment and structure
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 Back     alignment and structure
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 209
d2absa1 350 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g 4e-11
d1bx4a_ 342 c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien 2e-08
d2ajra1 319 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T 3e-07
d2afba1 333 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase 3e-06
d1tyya_ 304 c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm 3e-06
d1vk4a_ 288 c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot 4e-06
d1v19a_ 302 c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther 1e-05
d2dcna1 308 c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 2e-04
d2f02a1 313 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac 7e-04
d1vm7a_ 299 c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax 0.001
d2abqa1 306 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru 0.003
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Adenosine kinase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 59.0 bits (141), Expect = 4e-11
 Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 10/133 (7%)

Query: 18  ILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTI 77
           +  +    ++D VA V  S LD+   +RG +     E++  I S +            ++
Sbjct: 6   VFAIG-NPILDLVAEVPSSFLDEFFLKRGDATLATPEQMR-IYSTLDQF------NPTSL 57

Query: 78  AGGSVTNTIRGLS--VGFGVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQ 135
            GGS  N++R +   +      G +GA GDD +GQ+        G+    +      TG 
Sbjct: 58  PGGSALNSVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGV 117

Query: 136 CVCLVDASGNRTM 148
           C  L++       
Sbjct: 118 CAVLINEKERTLC 130
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 Back     information, alignment and structure
>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 Back     information, alignment and structure
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
d2absa1 350 Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} 99.92
d1bx4a_ 342 Adenosine kinase {Human (Homo sapiens) [TaxId: 960 99.9
d1vm7a_ 299 Ribokinase {Thermotoga maritima [TaxId: 2336]} 99.86
d2fv7a1 308 Ribokinase {Human (Homo sapiens) [TaxId: 9606]} 99.81
d2afba1 333 2-keto-3-deoxygluconate kinase {Thermotoga maritim 99.81
d1tyya_ 304 Aminoimidazole riboside kinase {Salmonella typhimu 99.78
d1v19a_ 302 2-keto-3-deoxygluconate kinase {Thermus thermophil 99.78
d2dcna1 308 Hypothetical fructokinase ST2478 {Sulfolobus tokod 99.76
d2ajra1 319 Putative sugar kinase TM0828 {Thermotoga maritima 99.72
d1rkda_ 306 Ribokinase {Escherichia coli [TaxId: 562]} 99.72
d2f02a1 313 Tagatose-6-phosphate kinase LacC {Enterococcus fae 99.7
d2abqa1 306 Fructose 1-phosphate kinase FruB {Bacillus halodur 99.65
d1vk4a_ 288 Hypothetical protein TM0415 {Thermotoga maritima [ 99.48
d1u2xa_ 450 ADP-specific phosphofructokinase {Pyrococcus horik 93.3
d1y4ia1 397 Methionine gamma-lyase, MGL {Citrobacter freundii 92.05
d1gc0a_ 392 Methionine gamma-lyase, MGL {Pseudomonas putida [T 90.23
d1ua4a_ 454 ADP-dependent glucokinase {Archaeon Pyrococcus fur 88.35
d1gc5a_ 467 ADP-dependent glucokinase {Archaeon Thermococcus l 88.19
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 85.73
d3lada2119 Dihydrolipoamide dehydrogenase {Azotobacter vinela 84.81
d1v59a2122 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 81.75
>d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: Ribokinase-like
family: Ribokinase-like
domain: Adenosine kinase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.92  E-value=1.9e-24  Score=183.52  Aligned_cols=177  Identities=21%  Similarity=0.275  Sum_probs=146.3

Q ss_pred             CCCCeEEEecCceeEEEEeecCHHHHhhCCCCCCCeeeecHHHHHHHHHHHhhccCCCCCCceEecCchHHHHHHHHHHh
Q 028423           13 SQAALILGLQPAALIDHVARVDWSLLDQIPGERGGSIPVAIEELEHILSEVKTHILDEPSPIKTIAGGSVTNTIRGLSVG   92 (209)
Q Consensus        13 ~~~~~Il~iG~~~~vD~i~~v~~~~l~~~p~~~g~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~GG~a~N~A~~la~r   92 (209)
                      +.+++|+|+| ++++|+++++++++|++++.++|++.+++.++.+ ++..+..      ......+||+++|+|++|+ +
T Consensus         1 ~~p~kil~iG-~~~vD~~~~v~~~~l~~~~~~~g~~~~~~~~~~~-~~~~~~~------~~~~~~~GG~~~N~a~~la-~   71 (350)
T d2absa1           1 TGPMRVFAIG-NPILDLVAEVPSSFLDEFFLKRGDATLATPEQMR-IYSTLDQ------FNPTSLPGGSALNSVRVVQ-K   71 (350)
T ss_dssp             CCCCCEEEEC-CCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGG-GGGTGGG------GCCEEEEESHHHHHHHHHH-H
T ss_pred             CCCcEEEEEC-CceEEEEEEeCHHHHHHcCCCCCcceecCHHHHH-HHHhhhc------cCceEecCcHHHHHHHHHH-H
Confidence            4678999999 9999999999999999999999999888765433 3333322      2567789999999999999 7


Q ss_pred             c---CCCeEEEEEecCChhHHHHHHHHHhCCCccceeEecCCCCeeEEEEEcCCCCeeEeeccccccCCCccccchhhcC
Q 028423           93 F---GVPCGLIGAYGDDQQGQLFVSNMQFSGVDVSRLRMKRGPTGQCVCLVDASGNRTMRPCLSNAVKIQADELIAEDVK  169 (209)
Q Consensus        93 L---G~~~~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~T~~~~v~i~~~GeR~~~~~~g~~~~l~~~~i~~~~i~  169 (209)
                      |   |..+.|+|+||+|.+|+++++.|++.||++.++...+.+|+.|+++++ +++|+++.+.++...+...+.....++
T Consensus        72 L~~~g~~~~~ig~vG~D~~G~~i~~~l~~~gv~~~~~~~~~~~t~~~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (350)
T d2absa1          72 LLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN-EKERTLCTHLGACGSFRLPEDWTTFAS  150 (350)
T ss_dssp             HHCSTTSEEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE-TTEEEEEEECGGGGGCCCCTTHHHHTT
T ss_pred             hccCCccEEEEecCCCChhhHhHHHHHHhcCCcccccccccccceEEEEEee-ccCcceEeeeccccccccccccccccc
Confidence            9   778999999999999999999999999999988665568999999987 688988888887777777777777889


Q ss_pred             CccEEEEeCCccH----H----HHHHHHhcCCeEEEec
Q 028423          170 GSKVLHLALYLKK----L----LFNLARDSLSSFSFYS  199 (209)
Q Consensus       170 ~~d~v~i~g~~~~----~----~~~~ar~~g~~vsfd~  199 (209)
                      ..+++++.++.+.    .    ....++..+..+++|-
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (350)
T d2absa1         151 GALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNL  188 (350)
T ss_dssp             TCCEEEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEEC
T ss_pred             ccccccceeeeeccccchhHHHHHHhhhhccceEEEec
Confidence            9999999887642    1    2244567788888875
>d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]} Back     information, alignment and structure
>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure