Citrus Sinensis ID: 028477

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIEVAAFHG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcc
Coil and Loop (DISEMBL)
meksnniggavaassplpmmgsraHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLKnsetsdfgslsysdlgAFRYLVHANGICAGYSLLSAIIAamprpstmsqAWTFFFLDQLLTYLILAAGAVSTEVLYLERkgdlaitwsavcgsfggfCHKAIASVIITFVAVACYVVLSLISSyklfskydapiacsgknIEVAAFHG
Flexible Loop (DISEMBL)
meksnniggavaassplpmMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIEVAAFHG
Low Complexity Region (SEG)
MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARlvpmalcvaalvlmlKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIEVAAFHG
Disordered region (IsUnstruct)
*************************************TAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIEVA****
Disordered Region (DISOPRED)
*************************************TAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSK*******************
Disordered Region (DISEMBL)
*********AVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIEVAAFHG
Disordered Region (DISPRO)
*******************************GNAALRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIEVAAFHG
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSGKNIEVAAFHG
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	208	2.2.26 [Sep-21-2011]
Q8W4Z5	207	CASP-like protein F16 OS=	N/A	no	0.990	0.995	0.684	2e-78
B9T3K6	205	CASP-like protein RCOM_04	N/A	no	0.971	0.985	0.693	2e-78
B9I0G0	201	CASP-like protein POPTRDR	yes	no	0.956	0.990	0.676	4e-76
A7QBZ2	205	CASP-like protein VIT_01s	yes	no	0.918	0.931	0.719	5e-76
C6TCJ2	206	CASP-like protein 10 OS=G	no	no	0.985	0.995	0.653	2e-72
B9GHX8	230	CASP-like protein POPTRDR	no	no	0.927	0.839	0.665	7e-72
Q8VZQ3	204	CASP-like protein At1g172	yes	no	0.961	0.980	0.644	1e-65
D7KFC7	204	CASP-like protein ARALYDR	N/A	no	0.961	0.980	0.634	2e-64
C6SYW3	208	CASP-like protein 11 OS=G	no	no	0.894	0.894	0.619	8e-56
Q0JEF7	209	CASP-like protein Os04g02	yes	no	0.822	0.818	0.587	3e-55

>sp|Q8W4Z5|CSPL1_GOSHI CASP-like protein F16 OS=Gossypium hirsutum GN=F16 PE=2 SV=1

 Score =  291 bits (745), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 143/209 (68%), Positives = 169/209 (80%), Gaps = 3/209 (1%)

Query: 1   MEKSNNIGG-AVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLML 59
           MEKS    G A A  SP+ +MGS  ++  N++ N ++RTAE + RLVPMAL VAALV+ML
Sbjct: 1   MEKSEKGNGVAPATRSPMALMGSSRNE--NQEVNTSMRTAETMLRLVPMALGVAALVVML 58

Query: 60  KNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQL 119
           KNS+++DFGS+SYSDLGAFRYLVHANGICAGYSLLSAIIAA+P PSTM +AWTFF LDQ+
Sbjct: 59  KNSQSNDFGSVSYSDLGAFRYLVHANGICAGYSLLSAIIAAVPSPSTMPRAWTFFLLDQI 118

Query: 120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLS 179
           LTY+IL A AVSTEVLYL  KGD AITWSA CG+F GFCHKA  +V+ITFVAV CY VLS
Sbjct: 119 LTYVILGAAAVSTEVLYLANKGDSAITWSAACGTFAGFCHKATIAVVITFVAVICYAVLS 178

Query: 180 LISSYKLFSKYDAPIACSGKNIEVAAFHG 208
           L+SSY+LF+K+DAP+    K IE   FHG
Sbjct: 179 LVSSYRLFTKFDAPVNYPSKTIEATVFHG 207

Gossypium hirsutum (taxid: 3635)

>sp|B9T3K6|CSPLD_RICCO CASP-like protein RCOM_0477780 OS=Ricinus communis GN=RCOM_0477780 PE=2 SV=1

 Score =  291 bits (745), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 145/209 (69%), Positives = 172/209 (82%), Gaps = 7/209 (3%)

Query: 1   MEKSNNIGGAVAASSPLPMM-GSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLML 59
           M+KS  +  AV   +P+ ++ GSR     +E  + ++RTAE + RLVPMA C++ALVLML
Sbjct: 1   MDKSK-VSTAVGGETPVGLITGSRD----DELESGSMRTAETVLRLVPMAFCISALVLML 55

Query: 60  KNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQL 119
           KNS+T+DFG+LSYSDLGAFRYLVHANGICAGYSLLSAII AMPRPSTMS+AWTFFFLDQ+
Sbjct: 56  KNSQTNDFGTLSYSDLGAFRYLVHANGICAGYSLLSAIIVAMPRPSTMSRAWTFFFLDQV 115

Query: 120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLS 179
           LTY+ILAA AVS E LYL RKGD+AITWSA C SFGGFCHKAI S +ITF+ V CY +LS
Sbjct: 116 LTYVILAAAAVSVEALYLARKGDIAITWSAACVSFGGFCHKAITSAVITFIVVVCYALLS 175

Query: 180 LISSYKLFSKYDAP-IACSGKNIEVAAFH 207
           L+SSYKLFS+Y AP ++  GK IEVAAFH
Sbjct: 176 LVSSYKLFSRYGAPDVSYPGKGIEVAAFH 204

Ricinus communis (taxid: 3988)

>sp|B9I0G0|CSPLA_POPTR CASP-like protein POPTRDRAFT_834139 OS=Populus trichocarpa GN=POPTRDRAFT_834139 PE=3 SV=1

 Score =  284 bits (726), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 142/210 (67%), Positives = 163/210 (77%), Gaps = 11/210 (5%)

Query: 1   MEKSNNIGGAVAASSPL-PMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLML 59
           MEK +        SSP+  MMGSR   + NED     RTAE + RLVPMALCV+ALV+ML
Sbjct: 1   MEKRDK------GSSPMATMMGSR---DENEDVENTTRTAETMLRLVPMALCVSALVVML 51

Query: 60  KNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQL 119
           KN++T+D+GSLSYSDLGAFRYLVH NGICAGYSLLSA+I AMPR STM +AW FF LDQ+
Sbjct: 52  KNTQTNDYGSLSYSDLGAFRYLVHVNGICAGYSLLSAVIVAMPRASTMPRAWAFFLLDQV 111

Query: 120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLS 179
           LTY+ILAAG VSTEVLYL  KGD  ITWS  C SFGGFCHKA+ S++ITFV V CY  LS
Sbjct: 112 LTYVILAAGTVSTEVLYLASKGDTTITWSEACVSFGGFCHKALISIVITFVVVICYAALS 171

Query: 180 LISSYKLFSKYDAPIAC-SGKNIEVAAFHG 208
           L+SSYKLFSKYD+P+    GK IE+A FHG
Sbjct: 172 LLSSYKLFSKYDSPVLTYPGKGIEIATFHG 201

Populus trichocarpa (taxid: 3694)

>sp|A7QBZ2|CSPLA_VITVI CASP-like protein VIT_01s0010g01870 OS=Vitis vinifera GN=VIT_01s0010g01870 PE=2 SV=1

 Score =  283 bits (724), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 141/196 (71%), Positives = 160/196 (81%), Gaps = 5/196 (2%)

Query: 13  ASSPLPMMGSRAHQEINEDGN-AALRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLS 71
           ASSP+ +       E +E GN +++RT E + RLVP+ALC  +LV+MLKNS+T+DFGSLS
Sbjct: 13  ASSPIEL----GCGEGDESGNKSSMRTVETLLRLVPVALCTVSLVVMLKNSQTNDFGSLS 68

Query: 72  YSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVS 131
           YSDLGAFRYLVHANGICAGYSLLSAI  AMPRP TMS+AWTFF LDQ+LTYLILAAGAVS
Sbjct: 69  YSDLGAFRYLVHANGICAGYSLLSAIFTAMPRPPTMSRAWTFFLLDQVLTYLILAAGAVS 128

Query: 132 TEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYD 191
           TEV+YL  KGD A+TWS  C SFGGFC K  AS+ ITFV V CY VLSLISSYKLFSKYD
Sbjct: 129 TEVVYLAYKGDEAVTWSDACSSFGGFCQKTTASISITFVTVLCYAVLSLISSYKLFSKYD 188

Query: 192 APIACSGKNIEVAAFH 207
           API  +GK IE+AAFH
Sbjct: 189 APICFNGKGIEIAAFH 204

Vitis vinifera (taxid: 29760)

>sp|C6TCJ2|CSPLA_SOYBN CASP-like protein 10 OS=Glycine max PE=2 SV=1

 Score =  271 bits (693), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 136/208 (65%), Positives = 160/208 (76%), Gaps = 3/208 (1%)

Query: 1   MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLK 60
           MEK + +  AV  S   PM       E+  +  +ALRTAE   RL P+ LCV+ALVLMLK
Sbjct: 2   MEKGSVVEAAVTRS---PMQMKMGDHELEGNTTSALRTAETFLRLFPVGLCVSALVLMLK 58

Query: 61  NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLL 120
           +S+ +++GS+ YSDLGAFRYLVHANGICAGYSL SA+IAAMP PST+ +AWTFF LDQ+L
Sbjct: 59  SSQQNEYGSVDYSDLGAFRYLVHANGICAGYSLFSAVIAAMPCPSTIPRAWTFFLLDQVL 118

Query: 121 TYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSL 180
           TY+ILAAGAVSTEVLYL   GD A TWS+ CGSFG FCHK  ASV ITFVAV CYV+LSL
Sbjct: 119 TYIILAAGAVSTEVLYLAENGDAATTWSSACGSFGRFCHKVTASVAITFVAVFCYVLLSL 178

Query: 181 ISSYKLFSKYDAPIACSGKNIEVAAFHG 208
           +SSYKLF+KYDAP +   + IEVAAF G
Sbjct: 179 VSSYKLFTKYDAPASRPTEAIEVAAFPG 206

Glycine max (taxid: 3847)

>sp|B9GHX8|CSPL8_POPTR CASP-like protein POPTRDRAFT_1070325 OS=Populus trichocarpa GN=POPTRDRAFT_1070325 PE=3 SV=1

 Score =  270 bits (689), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 135/203 (66%), Positives = 161/203 (79%), Gaps = 10/203 (4%)

Query: 1   MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLK 60
           MEK +        + P+ +MGSR   + NED  + +RTAE + RLVP+ALCV+ALV+MLK
Sbjct: 1   MEKKDE------GNPPMAVMGSR---DENEDVKSTMRTAETMLRLVPVALCVSALVVMLK 51

Query: 61  NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLL 120
           N++T+D+GSLSYSDLGAFRYLV+ANGICAGYSLLSA+I AMPR  TM QAWTFF LDQ+L
Sbjct: 52  NTQTNDYGSLSYSDLGAFRYLVNANGICAGYSLLSAVIVAMPRAWTMPQAWTFFLLDQVL 111

Query: 121 TYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSL 180
           TY+ILAAG VSTEVLYL  KGD +I WSA C SFGGFCHKA+ S +ITFVAV  Y  LSL
Sbjct: 112 TYVILAAGTVSTEVLYLANKGDTSIAWSAACVSFGGFCHKALISTVITFVAVIFYAALSL 171

Query: 181 ISSYKLFSKYDAPIAC-SGKNIE 202
           +SSYKLFSKYDAP+   SG+ I+
Sbjct: 172 VSSYKLFSKYDAPVVTQSGEGIK 194

Populus trichocarpa (taxid: 3694)

>sp|Q8VZQ3|CSPL3_ARATH CASP-like protein At1g17200 OS=Arabidopsis thaliana GN=At1g17200 PE=2 SV=2

 Score =  249 bits (635), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 134/208 (64%), Positives = 155/208 (74%), Gaps = 8/208 (3%)

Query: 1   MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLK 60
           MEKSN+   A    S           E  E+ +  +RTAE + RL P+ LCVAALV+MLK
Sbjct: 1   MEKSNDHDKASHGGS------GGGATEKWEETSLGIRTAETMLRLAPVGLCVAALVVMLK 54

Query: 61  NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPS-TMSQAWTFFFLDQL 119
           +SET++FGS+SYS+L AFRYLVHANGICAGYSLLSA IAAMPR S TM + WTFF LDQL
Sbjct: 55  DSETNEFGSISYSNLTAFRYLVHANGICAGYSLLSAAIAAMPRSSSTMPRVWTFFCLDQL 114

Query: 120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLS 179
           LTYL+LAAGAVS EVLYL   GD AITWS  C S+GGFCH+A ASVIITF  V  Y+VLS
Sbjct: 115 LTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHRATASVIITFFVVCFYIVLS 174

Query: 180 LISSYKLFSKYDAP-IACSGKNIEVAAF 206
           LISSYKLF+++D P I  S KN+EVA F
Sbjct: 175 LISSYKLFTRFDPPSIVDSAKNLEVAVF 202

Arabidopsis thaliana (taxid: 3702)

>sp|D7KFC7|CSPLB_ARALL CASP-like protein ARALYDRAFT_471923 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471923 PE=3 SV=1

 Score =  245 bits (625), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 132/208 (63%), Positives = 154/208 (74%), Gaps = 8/208 (3%)

Query: 1   MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLK 60
           MEKSN+   A    S           E  E+ +  +RTAE + RL P+ LCVAALV+MLK
Sbjct: 1   MEKSNDHDKASHGGS------GGGATEKWEETSPGIRTAETMLRLAPVGLCVAALVVMLK 54

Query: 61  NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPS-TMSQAWTFFFLDQL 119
           +SET++FGS+SYS+L AFRYLVHANGICAGYSLLSA IAAMPR S TM + WTFF LDQL
Sbjct: 55  DSETNEFGSISYSNLTAFRYLVHANGICAGYSLLSAAIAAMPRSSSTMPRVWTFFCLDQL 114

Query: 120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLS 179
           LTYL+LAAGAVS EVLYL   GD AITWS  C S+GGFCH+A ASVIITF  V  Y++LS
Sbjct: 115 LTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHRATASVIITFFVVCFYILLS 174

Query: 180 LISSYKLFSKYDAP-IACSGKNIEVAAF 206
           LISSYKLF+++D P I  S K +EVA F
Sbjct: 175 LISSYKLFTRFDPPSIVDSDKTLEVAVF 202

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|C6SYW3|CSPLB_SOYBN CASP-like protein 11 OS=Glycine max PE=2 SV=1

 Score =  216 bits (550), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 117/189 (61%), Positives = 138/189 (73%), Gaps = 3/189 (1%)

Query: 21  GSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRY 80
           GS    E   D N  LR  E   RL P+ LCV ALV+MLKNS+ + +GS+SY+DLGAFRY
Sbjct: 22  GSDKEFEGYIDSN--LRVVETFLRLFPIGLCVTALVIMLKNSQENKYGSVSYTDLGAFRY 79

Query: 81  LVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERK 140
           LVHANGICAGYSL SAI  A+PR S++  AWTFF LDQ+LTY+IL+AGA S EVLYL  K
Sbjct: 80  LVHANGICAGYSLFSAIFVALPRLSSVHIAWTFFVLDQVLTYIILSAGAASAEVLYLAEK 139

Query: 141 GDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAP-IACSGK 199
           G++A  WS+ C SFG FCHK  AS  ITFV V  YV+LSLISSYKLFSKYDAP ++    
Sbjct: 140 GNMATAWSSACRSFGPFCHKVTASTTITFVVVVFYVLLSLISSYKLFSKYDAPTVSNPSM 199

Query: 200 NIEVAAFHG 208
             ++ AFHG
Sbjct: 200 GADIVAFHG 208

Glycine max (taxid: 3847)

>sp|Q0JEF7|CSPLA_ORYSJ CASP-like protein Os04g0281900 OS=Oryza sativa subsp. japonica GN=Os04g0281900 PE=2 SV=1

 Score =  214 bits (545), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 101/172 (58%), Positives = 130/172 (75%), Gaps = 1/172 (0%)

Query: 36  LRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLS 95
           +R  E + R  P+ LCVAA+ +ML+NS T+++G++SYSDLG F+YLV+ANG+CA YSL S
Sbjct: 36  VRPVETLLRAAPLGLCVAAMAIMLRNSVTNEYGTVSYSDLGGFKYLVYANGLCAAYSLAS 95

Query: 96  AIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFG 155
           A   A+PRP+T+S++W  F LDQ+ TYLILAAGA S E+LYL   GD  +TWS  CG FG
Sbjct: 96  AFYIAVPRPATLSRSWVVFLLDQVFTYLILAAGAASAELLYLAYNGDKEVTWSEACGVFG 155

Query: 156 GFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAPIACSG-KNIEVAAF 206
           GFC +A  SV ITF +VACY++LSLISSY+LFS YD P    G K +E+AAF
Sbjct: 156 GFCRQARTSVAITFASVACYILLSLISSYRLFSAYDPPQPSLGNKGVEIAAF 207

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
75162556	207	RecName: Full=CASP-like protein F16 gi|1	0.990	0.995	0.684	1e-76
255584172	205	conserved hypothetical protein [Ricinus	0.971	0.985	0.693	1e-76
224117544	201	predicted protein [Populus trichocarpa]	0.956	0.990	0.676	2e-74
225425984	205	PREDICTED: UPF0497 membrane protein 11 [	0.918	0.931	0.719	3e-74
356569822	203	PREDICTED: CASP-like protein 10-like [Gl	0.975	1.0	0.677	2e-72
358249278	206	CASP-like protein 10 [Glycine max] gi|28	0.985	0.995	0.653	1e-70
224061439	230	predicted protein [Populus trichocarpa]	0.927	0.839	0.665	4e-70
388518193	207	unknown [Lotus japonicus]	0.966	0.971	0.602	1e-64
17380964	204	unknown protein [Arabidopsis thaliana]	0.961	0.980	0.649	2e-64
297738291	151	unnamed protein product [Vitis vinifera]	0.721	0.993	0.806	2e-64

>gi|75162556|sp|Q8W4Z5.1|CSPL1_GOSHI RecName: Full=CASP-like protein F16 gi|16973324|emb|CAC84114.1| hypothetical protein [Gossypium hirsutum]

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 143/209 (68%), Positives = 169/209 (80%), Gaps = 3/209 (1%)

Query: 1   MEKSNNIGG-AVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLML 59
           MEKS    G A A  SP+ +MGS  ++  N++ N ++RTAE + RLVPMAL VAALV+ML
Sbjct: 1   MEKSEKGNGVAPATRSPMALMGSSRNE--NQEVNTSMRTAETMLRLVPMALGVAALVVML 58

Query: 60  KNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQL 119
           KNS+++DFGS+SYSDLGAFRYLVHANGICAGYSLLSAIIAA+P PSTM +AWTFF LDQ+
Sbjct: 59  KNSQSNDFGSVSYSDLGAFRYLVHANGICAGYSLLSAIIAAVPSPSTMPRAWTFFLLDQI 118

Query: 120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLS 179
           LTY+IL A AVSTEVLYL  KGD AITWSA CG+F GFCHKA  +V+ITFVAV CY VLS
Sbjct: 119 LTYVILGAAAVSTEVLYLANKGDSAITWSAACGTFAGFCHKATIAVVITFVAVICYAVLS 178

Query: 180 LISSYKLFSKYDAPIACSGKNIEVAAFHG 208
           L+SSY+LF+K+DAP+    K IE   FHG
Sbjct: 179 LVSSYRLFTKFDAPVNYPSKTIEATVFHG 207

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584172|ref|XP_002532825.1| conserved hypothetical protein [Ricinus communis] gi|288558965|sp|B9T3K6.1|CSPLD_RICCO RecName: Full=CASP-like protein RCOM_0477780 gi|223527416|gb|EEF29555.1| conserved hypothetical protein [Ricinus communis]

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 145/209 (69%), Positives = 172/209 (82%), Gaps = 7/209 (3%)

Query: 1   MEKSNNIGGAVAASSPLPMM-GSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLML 59
           M+KS  +  AV   +P+ ++ GSR     +E  + ++RTAE + RLVPMA C++ALVLML
Sbjct: 1   MDKSK-VSTAVGGETPVGLITGSRD----DELESGSMRTAETVLRLVPMAFCISALVLML 55

Query: 60  KNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQL 119
           KNS+T+DFG+LSYSDLGAFRYLVHANGICAGYSLLSAII AMPRPSTMS+AWTFFFLDQ+
Sbjct: 56  KNSQTNDFGTLSYSDLGAFRYLVHANGICAGYSLLSAIIVAMPRPSTMSRAWTFFFLDQV 115

Query: 120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLS 179
           LTY+ILAA AVS E LYL RKGD+AITWSA C SFGGFCHKAI S +ITF+ V CY +LS
Sbjct: 116 LTYVILAAAAVSVEALYLARKGDIAITWSAACVSFGGFCHKAITSAVITFIVVVCYALLS 175

Query: 180 LISSYKLFSKYDAP-IACSGKNIEVAAFH 207
           L+SSYKLFS+Y AP ++  GK IEVAAFH
Sbjct: 176 LVSSYKLFSRYGAPDVSYPGKGIEVAAFH 204

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117544|ref|XP_002317605.1| predicted protein [Populus trichocarpa] gi|341958552|sp|B9I0G0.1|CSPLA_POPTR RecName: Full=CASP-like protein POPTRDRAFT_834139 gi|222860670|gb|EEE98217.1| predicted protein [Populus trichocarpa]

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 142/210 (67%), Positives = 163/210 (77%), Gaps = 11/210 (5%)

Query: 1   MEKSNNIGGAVAASSPL-PMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLML 59
           MEK +        SSP+  MMGSR   + NED     RTAE + RLVPMALCV+ALV+ML
Sbjct: 1   MEKRDK------GSSPMATMMGSR---DENEDVENTTRTAETMLRLVPMALCVSALVVML 51

Query: 60  KNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQL 119
           KN++T+D+GSLSYSDLGAFRYLVH NGICAGYSLLSA+I AMPR STM +AW FF LDQ+
Sbjct: 52  KNTQTNDYGSLSYSDLGAFRYLVHVNGICAGYSLLSAVIVAMPRASTMPRAWAFFLLDQV 111

Query: 120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLS 179
           LTY+ILAAG VSTEVLYL  KGD  ITWS  C SFGGFCHKA+ S++ITFV V CY  LS
Sbjct: 112 LTYVILAAGTVSTEVLYLASKGDTTITWSEACVSFGGFCHKALISIVITFVVVICYAALS 171

Query: 180 LISSYKLFSKYDAPIAC-SGKNIEVAAFHG 208
           L+SSYKLFSKYD+P+    GK IE+A FHG
Sbjct: 172 LLSSYKLFSKYDSPVLTYPGKGIEIATFHG 201

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425984|ref|XP_002275339.1| PREDICTED: UPF0497 membrane protein 11 [Vitis vinifera] gi|226713183|sp|A7QBZ2.1|CSPLA_VITVI RecName: Full=CASP-like protein VIT_01s0010g01870

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 141/196 (71%), Positives = 160/196 (81%), Gaps = 5/196 (2%)

Query: 13  ASSPLPMMGSRAHQEINEDGN-AALRTAEPIARLVPMALCVAALVLMLKNSETSDFGSLS 71
           ASSP+ +       E +E GN +++RT E + RLVP+ALC  +LV+MLKNS+T+DFGSLS
Sbjct: 13  ASSPIEL----GCGEGDESGNKSSMRTVETLLRLVPVALCTVSLVVMLKNSQTNDFGSLS 68

Query: 72  YSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVS 131
           YSDLGAFRYLVHANGICAGYSLLSAI  AMPRP TMS+AWTFF LDQ+LTYLILAAGAVS
Sbjct: 69  YSDLGAFRYLVHANGICAGYSLLSAIFTAMPRPPTMSRAWTFFLLDQVLTYLILAAGAVS 128

Query: 132 TEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYD 191
           TEV+YL  KGD A+TWS  C SFGGFC K  AS+ ITFV V CY VLSLISSYKLFSKYD
Sbjct: 129 TEVVYLAYKGDEAVTWSDACSSFGGFCQKTTASISITFVTVLCYAVLSLISSYKLFSKYD 188

Query: 192 APIACSGKNIEVAAFH 207
           API  +GK IE+AAFH
Sbjct: 189 APICFNGKGIEIAAFH 204

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569822|ref|XP_003553094.1| PREDICTED: CASP-like protein 10-like [Glycine max]

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 141/208 (67%), Positives = 161/208 (77%), Gaps = 5/208 (2%)

Query: 1   MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLK 60
           MEK    G  V  ++P   M  +   E+ E   +ALRTAE   RLVP+ LCV+ALVLMLK
Sbjct: 1   MEK----GSVVEVAAPRSPMQMKMGDEL-EGNTSALRTAETFLRLVPVGLCVSALVLMLK 55

Query: 61  NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLL 120
           NS+ +++GS+ YSDLGAFRYLVHANGICAGYSL SA+IAAMPRPSTM +AWTFF LDQ+L
Sbjct: 56  NSQQNEYGSVDYSDLGAFRYLVHANGICAGYSLFSAVIAAMPRPSTMPRAWTFFLLDQVL 115

Query: 121 TYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSL 180
           TY+ILAAGAVSTEVLYL  KGD A TWS+ CGSFG FCHK  ASV ITFVAV CYV+LSL
Sbjct: 116 TYIILAAGAVSTEVLYLAEKGDAATTWSSACGSFGRFCHKVTASVAITFVAVFCYVLLSL 175

Query: 181 ISSYKLFSKYDAPIACSGKNIEVAAFHG 208
           ISSYKLF+ YDAP +     IEVAAF G
Sbjct: 176 ISSYKLFTNYDAPASRPTAAIEVAAFPG 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249278|ref|NP_001239767.1| CASP-like protein 10 [Glycine max] gi|288559107|sp|C6TCJ2.1|CSPLA_SOYBN RecName: Full=CASP-like protein 10 gi|255638470|gb|ACU19544.1| unknown [Glycine max]

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 136/208 (65%), Positives = 160/208 (76%), Gaps = 3/208 (1%)

Query: 1   MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLK 60
           MEK + +  AV  S   PM       E+  +  +ALRTAE   RL P+ LCV+ALVLMLK
Sbjct: 2   MEKGSVVEAAVTRS---PMQMKMGDHELEGNTTSALRTAETFLRLFPVGLCVSALVLMLK 58

Query: 61  NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLL 120
           +S+ +++GS+ YSDLGAFRYLVHANGICAGYSL SA+IAAMP PST+ +AWTFF LDQ+L
Sbjct: 59  SSQQNEYGSVDYSDLGAFRYLVHANGICAGYSLFSAVIAAMPCPSTIPRAWTFFLLDQVL 118

Query: 121 TYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSL 180
           TY+ILAAGAVSTEVLYL   GD A TWS+ CGSFG FCHK  ASV ITFVAV CYV+LSL
Sbjct: 119 TYIILAAGAVSTEVLYLAENGDAATTWSSACGSFGRFCHKVTASVAITFVAVFCYVLLSL 178

Query: 181 ISSYKLFSKYDAPIACSGKNIEVAAFHG 208
           +SSYKLF+KYDAP +   + IEVAAF G
Sbjct: 179 VSSYKLFTKYDAPASRPTEAIEVAAFPG 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061439|ref|XP_002300480.1| predicted protein [Populus trichocarpa] gi|341958544|sp|B9GHX8.1|CSPL8_POPTR RecName: Full=CASP-like protein POPTRDRAFT_1070325 gi|222847738|gb|EEE85285.1| predicted protein [Populus trichocarpa]

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 135/203 (66%), Positives = 161/203 (79%), Gaps = 10/203 (4%)

Query: 1   MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLK 60
           MEK +        + P+ +MGSR   + NED  + +RTAE + RLVP+ALCV+ALV+MLK
Sbjct: 1   MEKKDE------GNPPMAVMGSR---DENEDVKSTMRTAETMLRLVPVALCVSALVVMLK 51

Query: 61  NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLL 120
           N++T+D+GSLSYSDLGAFRYLV+ANGICAGYSLLSA+I AMPR  TM QAWTFF LDQ+L
Sbjct: 52  NTQTNDYGSLSYSDLGAFRYLVNANGICAGYSLLSAVIVAMPRAWTMPQAWTFFLLDQVL 111

Query: 121 TYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSL 180
           TY+ILAAG VSTEVLYL  KGD +I WSA C SFGGFCHKA+ S +ITFVAV  Y  LSL
Sbjct: 112 TYVILAAGTVSTEVLYLANKGDTSIAWSAACVSFGGFCHKALISTVITFVAVIFYAALSL 171

Query: 181 ISSYKLFSKYDAPIAC-SGKNIE 202
           +SSYKLFSKYDAP+   SG+ I+
Sbjct: 172 VSSYKLFSKYDAPVVTQSGEGIK 194

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388518193|gb|AFK47158.1| unknown [Lotus japonicus]

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 129/214 (60%), Positives = 151/214 (70%), Gaps = 13/214 (6%)

Query: 1   MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLK 60
           MEK N +     +S           +EI  + N  LR  E   RL P+ LCV ALV+MLK
Sbjct: 1   MEKGNVVEATTRSSM------RHGDEEIEGNTNI-LRIVETFLRLFPIGLCVTALVIMLK 53

Query: 61  NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQLL 120
           NS+ +++G+L Y+DL AFRYLVHANGICAGYSL SA+I A+PRPSTM +AWTFF LDQLL
Sbjct: 54  NSQENEYGTLDYTDLSAFRYLVHANGICAGYSLFSAVIIALPRPSTMPRAWTFFVLDQLL 113

Query: 121 TYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSL 180
           TY+ILAAGA+S EVLYL  KGD    WS+ CG FG FCHKA AS+ ITFVAV CYVVLSL
Sbjct: 114 TYIILAAGALSMEVLYLTEKGDPPAAWSSACGYFGPFCHKATASIAITFVAVICYVVLSL 173

Query: 181 ISSYKLFSKYDAP------IACSGKNIEVAAFHG 208
           ISSYKLFSKYDAP         + K I++A FHG
Sbjct: 174 ISSYKLFSKYDAPAPPMSNSNNNNKGIDIAPFHG 207

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17380964|gb|AAL36294.1| unknown protein [Arabidopsis thaliana]

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/208 (64%), Positives = 159/208 (76%), Gaps = 8/208 (3%)

Query: 1   MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARLVPMALCVAALVLMLK 60
           MEKSN+   A   +S     G  A ++  E+ +  +RTAE + RL P+ LCVAALV+MLK
Sbjct: 1   MEKSNDHDKASHGAS-----GGGATEKW-EETSLGIRTAETMLRLAPVGLCVAALVVMLK 54

Query: 61  NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPS-TMSQAWTFFFLDQL 119
           +SET++FGS+SYS+L AFRYLVHANGICAGYSLLSA IAAMPR S TM + WTFF LDQL
Sbjct: 55  DSETNEFGSISYSNLTAFRYLVHANGICAGYSLLSAAIAAMPRSSSTMPRVWTFFCLDQL 114

Query: 120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLS 179
           LTYL+LAAGAVS EVLYL   GD AITWS  C S+GGFCH+A ASVIITF  V  Y+VLS
Sbjct: 115 LTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHRATASVIITFFVVCFYIVLS 174

Query: 180 LISSYKLFSKYDAP-IACSGKNIEVAAF 206
           LISSYKLF+++D P I  S KN+EVA F
Sbjct: 175 LISSYKLFTRFDPPSIVDSAKNLEVAVF 202

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738291|emb|CBI27492.3| unnamed protein product [Vitis vinifera]

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 121/150 (80%), Positives = 130/150 (86%)

Query: 58  MLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLD 117
           MLKNS+T+DFGSLSYSDLGAFRYLVHANGICAGYSLLSAI  AMPRP TMS+AWTFF LD
Sbjct: 1   MLKNSQTNDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIFTAMPRPPTMSRAWTFFLLD 60

Query: 118 QLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVV 177
           Q+LTYLILAAGAVSTEV+YL  KGD A+TWS  C SFGGFC K  AS+ ITFV V CY V
Sbjct: 61  QVLTYLILAAGAVSTEVVYLAYKGDEAVTWSDACSSFGGFCQKTTASISITFVTVLCYAV 120

Query: 178 LSLISSYKLFSKYDAPIACSGKNIEVAAFH 207
           LSLISSYKLFSKYDAPI  +GK IE+AAFH
Sbjct: 121 LSLISSYKLFSKYDAPICFNGKGIEIAAFH 150

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
TAIR|locus:2020297	204	AT1G17200 "AT1G17200" [Arabido	0.961	0.980	0.596	1.3e-54
TAIR|locus:2091045	178	AT3G14380 "AT3G14380" [Arabido	0.774	0.904	0.5	1.8e-39
TAIR|locus:2160200	194	AT5G54980 [Arabidopsis thalian	0.625	0.670	0.377	5.7e-20
TAIR|locus:505006479	182	AT4G16442 "AT4G16442" [Arabido	0.581	0.664	0.365	1.8e-14
TAIR|locus:2053514	206	CASP1 "AT2G36100" [Arabidopsis	0.552	0.558	0.307	2.4e-12
TAIR|locus:2058744	201	AT2G35760 "AT2G35760" [Arabido	0.572	0.592	0.306	3.9e-12
TAIR|locus:2080742	204	CASP2 "AT3G11550" [Arabidopsis	0.841	0.857	0.264	5e-12
TAIR|locus:2160747	202	CASP4 "AT5G06200" [Arabidopsis	0.557	0.574	0.313	8.2e-12
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	0.572	0.636	0.272	2.2e-11
TAIR|locus:2128776	164	AT4G03540 "AT4G03540" [Arabido	0.543	0.689	0.3	2.8e-11

TAIR|locus:2020297 AT1G17200 "AT1G17200" [Arabidopsis thaliana (taxid:3702)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 124/208 (59%), Positives = 145/208 (69%)

Query:     1 MEKSNNIGGAVAASSPLPMMGSRAHQEINEDGNAALRTAEPIARXXXXXXXXXXXXXXXK 60
             MEKSN+   A    S     G  A ++  E+ +  +RTAE + R               K
Sbjct:     1 MEKSNDHDKASHGGS-----GGGATEKW-EETSLGIRTAETMLRLAPVGLCVAALVVMLK 54

Query:    61 NSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPS-TMSQAWTFFFLDQL 119
             +SET++FGS+SYS+L AFRYLVHANGICAGYSLLSA IAAMPR S TM + WTFF LDQL
Sbjct:    55 DSETNEFGSISYSNLTAFRYLVHANGICAGYSLLSAAIAAMPRSSSTMPRVWTFFCLDQL 114

Query:   120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLS 179
             LTYL+LAAGAVS EVLYL   GD AITWS  C S+GGFCH+A ASVIITF  V  Y+VLS
Sbjct:   115 LTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHRATASVIITFFVVCFYIVLS 174

Query:   180 LISSYKLFSKYDAP-IACSGKNIEVAAF 206
             LISSYKLF+++D P I  S KN+EVA F
Sbjct:   175 LISSYKLFTRFDPPSIVDSAKNLEVAVF 202

GO:0005515 "protein binding" evidence=IPI

GO:0080167 "response to karrikin" evidence=IEP

GO:0006949 "syncytium formation" evidence=RCA

TAIR|locus:2091045 AT3G14380 "AT3G14380" [Arabidopsis thaliana (taxid:3702)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 81/162 (50%), Positives = 112/162 (69%)

Query:    33 NAALRTAEPIARXXXXXXXXXXXXXXXKNSETSDFGSLSYSDLGAFRYLVHANGICAGYS 92
             N   ++AE + R               KNS +++FGS+SYS++GAF YLV ANG+CA YS
Sbjct:    17 NRTEKSAEAVLRVASMALSITGLVIMIKNSISNEFGSVSYSNIGAFMYLVSANGVCAAYS 76

Query:    93 LLSAI-IAAMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVC 151
             LLSA+ I A+P P +  Q  T F LDQ++TY++LAAGAVS E +YL   G++ ITWS+ C
Sbjct:    77 LLSALAILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYGNIPITWSSAC 136

Query:   152 GSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKYDAP 193
              S+G FCH A+ SV+ TFV    Y++LSLISSY+LF++++AP
Sbjct:   137 DSYGSFCHNALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

GO:0016020 "membrane" evidence=ISS

GO:0010227 "floral organ abscission" evidence=IEP

TAIR|locus:2160200 AT5G54980 [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 51/135 (37%), Positives = 85/135 (62%)

Query:    61 NSETS-DFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFFLDQL 119
             N E++ D+G+L Y+ +   +Y+V  + I A Y+LLS + + +     +S+AW FF  DQ+
Sbjct:    54 NHESNPDYGNLEYNSIMGLKYMVGVSAISAIYALLSTVSSWVT--CLVSKAWLFFIPDQV 111

Query:   120 LTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHK-AIASVIITFVAVACYVVL 178
             L Y++  + A +TE++YL  KGD  +TWS +C S+  +C K  IA  +  FV +  ++ L
Sbjct:   112 LAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSSYPHYCSKLTIALGLHVFV-LFFFLFL 170

Query:   179 SLISSYKLFSKYDAP 193
             S+IS+Y+ FS +D P
Sbjct:   171 SVISAYRAFSPFDPP 185

GO:0005634 "nucleus" evidence=ISM

GO:0005747 "mitochondrial respiratory chain complex I" evidence=IBA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IBA

GO:0045333 "cellular respiration" evidence=IBA

TAIR|locus:505006479 AT4G16442 "AT4G16442" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 46/126 (36%), Positives = 67/126 (53%)

Query:    72 YSDLGAFRYLVHANGICAGYSLLSAI---IAAMPRPSTMSQ--AWTFFFLDQLLTYLILA 126
             Y+D+ A  +LV ANGI A YSLL ++   +  M      S+  AW FF  DQ + YL +A
Sbjct:    48 YTDMKAVVFLVVANGIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVA 107

Query:   127 AGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 186
             A A + E   + R+G+  + W  VC  +G FC++    V    +A    V +S IS++ L
Sbjct:   108 AIAATAESGVIAREGEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSL 167

Query:   187 FSKYDA 192
             F  Y A
Sbjct:   168 FRLYGA 173

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2053514 CASP1 "AT2G36100" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 36/117 (30%), Positives = 58/117 (49%)

Query:    72 YSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAGA 129
             Y DL AF+Y V A  + A Y +LS    I ++ RP  ++        D L+  L  +A A
Sbjct:    87 YDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAAA 146

Query:   130 VSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 186
              +  + YL   G+ +  W  +C  FG FC     +V+   +A+  ++VL +IS+  L
Sbjct:   147 AAASITYLAHNGNQSTNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIISAIAL 203

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2058744 AT2G35760 "AT2G35760" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 38/124 (30%), Positives = 62/124 (50%)

Query:    72 YSDLGAFRYLVHANGICAGYSLLSAI---IAAMPRPSTMSQ--AWTFFFLDQLLTYLILA 126
             ++D+ A   LV  NGI AGYSL+ A+   +  M      S+  AW  FF DQ + YL +A
Sbjct:    67 FTDMKALVLLVVVNGIAAGYSLVQAVRCVVGLMKGRVLFSKPLAWAIFFGDQAVAYLCVA 126

Query:   127 AGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 186
               A + +     + G+  + W  +C  +G FC++    +     A    V++S IS++ +
Sbjct:   127 GVAAAAQSAAFAKLGEPELQWMKICNMYGKFCNQVGEGIASALFACIGMVLISCISAFGV 186

Query:   187 FSKY 190
             F  Y
Sbjct:   187 FRLY 190

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0015996 "chlorophyll catabolic process" evidence=RCA

TAIR|locus:2080742 CASP2 "AT3G11550" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 49/185 (26%), Positives = 76/185 (41%)

Query:    12 AASSPLPMMG-SRAHQEINEDG-NAALRTAEPIARXXXXXXXXXXXXXXXKNSETSDFGS 69
             A     P++G +R H      G N  L   + + R                + ET  F +
Sbjct:    17 AMKGKAPLIGVARDHTTSGSGGYNRGLAIFDFLLRLAAIVAALAAAATMGTSDETLPFFT 76

Query:    70 ------LSYSDLGAFRYLVHANGICAGYSLLSAIIAAMP--RPSTMSQAWTFFFLDQLLT 121
                    SY DL  F++ V A  +  GY +LS  I+ +   RP   +       LD  + 
Sbjct:    77 QFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILRPLATAPRLLLLVLDTGVL 136

Query:   122 YLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLI 181
              L  AA + +  + YL   G+    W  +C  FG FC K+  +V+  FV+V  + +L +I
Sbjct:   137 ALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSGAVVSAFVSVVFFTILVVI 196

Query:   182 SSYKL 186
             S   L
Sbjct:   197 SGVAL 201

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2160747 CASP4 "AT5G06200" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 37/118 (31%), Positives = 55/118 (46%)

Query:    71 SYSDLGAFRYLVHANGICAGYSLLSA--IIAAMPRPSTMSQAWTFFFLDQLLTYLILAAG 128
             SY DL  F++ V A  I AGY +LS    +  + RP  ++       LD     L  AA 
Sbjct:    82 SYDDLPTFQFFVVAIAIVAGYLVLSLPFSVVTIVRPLAVAPRLLLLVLDTAALALDTAAA 141

Query:   129 AVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL 186
             + +  ++YL   G+    W  +C  FG FC K   +V+  F +V    +L +IS   L
Sbjct:   142 SAAAAIVYLAHNGNTNTNWLPICQQFGDFCQKTSGAVVSAFASVTFLAILVVISGVSL 199

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 33/121 (27%), Positives = 62/121 (51%)

Query:    72 YSDLGAFRYLVHANGICAGYSLLSAIIAAMP--RPSTMSQAWTFFFLDQLLTYLILAAGA 129
             Y+DL A  + V AN + +GY +LS  +A +   +  T +       LD  +  L+ +  +
Sbjct:    67 YNDLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGAS 126

Query:   130 VSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSK 189
              +  ++YL   G+    W A+C  F  FC +   S+I +F+A+   ++L L+S+  L  +
Sbjct:   127 SAAAIVYLAHNGNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRR 186

Query:   190 Y 190
             +
Sbjct:   187 H 187

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2128776 AT4G03540 "AT4G03540" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 36/120 (30%), Positives = 64/120 (53%)

Query:    72 YSDLGAFRYLVHANGICAGYSLLSAIIAAMPRPSTMSQAWTFFF-LDQLLTYLILAAGAV 130
             Y+D+ AF+Y V AN + + YS L   +  +P+ S +   W F   LD ++T L+ ++ + 
Sbjct:    46 YTDMAAFKYFVIANAVVSVYSFL---VLFLPKESLL---WKFVVVLDLVMTMLLTSSLSA 99

Query:   131 STEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKLFSKY 190
             +  V  + +KG+    W  +CG    FC +   ++I  FVA+  YV+L L S + +   +
Sbjct:   100 ALAVAQVGKKGNANAGWLPICGQVPKFCDQITGALIAGFVALVLYVLLLLYSLHAVVDPF 159

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
D7KFC7	CSPLB_ARALL	No assigned EC number	0.6346	0.9615	0.9803	N/A	no
A7QBZ2	CSPLA_VITVI	No assigned EC number	0.7193	0.9182	0.9317	yes	no
Q0JEF7	CSPLA_ORYSJ	No assigned EC number	0.5872	0.8221	0.8181	yes	no
Q8VZQ3	CSPL3_ARATH	No assigned EC number	0.6442	0.9615	0.9803	yes	no
C5YDQ9	CSPLG_SORBI	No assigned EC number	0.5317	0.8221	0.8221	N/A	no
B9I0G0	CSPLA_POPTR	No assigned EC number	0.6761	0.9567	0.9900	yes	no
B9T3K6	CSPLD_RICCO	No assigned EC number	0.6937	0.9711	0.9853	N/A	no
B6SR79	CSPL7_MAIZE	No assigned EC number	0.5406	0.8173	0.8133	N/A	no
B8ARW3	CSPLA_ORYSI	No assigned EC number	0.5872	0.8221	0.8181	N/A	no
B4FBQ7	CSPL6_MAIZE	No assigned EC number	0.5375	0.8221	0.8028	N/A	no
A9P1V1	CSPL6_PICSI	No assigned EC number	0.5056	0.8317	0.8826	N/A	no
Q8W4Z5	CSPL1_GOSHI	No assigned EC number	0.6842	0.9903	0.9951	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	208
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	1e-35
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	5e-21

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score =  122 bits (307), Expect = 1e-35
 Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 8/150 (5%)

Query: 33  NAALRTAEPIARLVPMALCVAALVLMLKNSETSDF----GSLSYSDLGAFRYLVHANGIC 88
              LR AE + RL    L +AA V+M  N +T  F       S+SDL AFRYLV AN I 
Sbjct: 1   GRPLRLAELVLRLAAFVLALAAAVVMGTNKQTKPFFFIQKKASFSDLPAFRYLVVANAIA 60

Query: 89  AGYSLLSAIIAAM----PRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLA 144
           AGYSLL  +++       +P T   AW  F LDQ++ YL+LAA + +  ++YL R G+  
Sbjct: 61  AGYSLLQLVLSVYLLSRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNSH 120

Query: 145 ITWSAVCGSFGGFCHKAIASVIITFVAVAC 174
             W  +C  FG FC++A ASV ++F+A   
Sbjct: 121 ANWMKICNQFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score = 84.8 bits (210), Expect = 5e-21
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 8/153 (5%)

Query: 42  IARLVPMALCVAALVLMLKNSETSDFGSLS------YSDLGAFRYLVHANGICAGYSLLS 95
           I R++  +  +AA ++M  N ET             +SDL AF Y V AN I  GYSLLS
Sbjct: 2   ILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLS 61

Query: 96  AIIA--AMPRPSTMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGS 153
            +++   + +     +    FFLD ++  L+ +  + +  V Y+ + G+    W  +CG 
Sbjct: 62  LVVSIFGLLKRRVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGV 121

Query: 154 FGGFCHKAIASVIITFVAVACYVVLSLISSYKL 186
           FG FC +   S+ ++  AV   V+LS++S+  L
Sbjct: 122 FGKFCDRIAGSLALSLFAVILLVLLSILSAISL 154

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	208
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.49

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=1.2e-41  Score=277.86  Aligned_cols=146  Identities=32%  Similarity=0.568  Sum_probs=134.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCccccc------ceeeccchhHHHHHHHHHHHHHHHHHHHHHHH--hcCCCCCcceEe
Q 028477           41 PIARLVPMALCVAALVLMLKNSETSDFG------SLSYSDLGAFRYLVHANGICAGYSLLSAIIAA--MPRPSTMSQAWT  112 (208)
Q Consensus        41 lvLRv~a~~~slaA~vvM~t~~qt~~~~------~~~fs~~~af~ylVaan~I~~~Ysllql~~~~--i~r~~~~~~~~~  112 (208)
                      ++||+++++++++|+++|+||+|+..+.      +.||+|+++|+|+|++|+|+|+|+++|+++..  +.++....+.|+
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~~~~~~   80 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVFFKLIA   80 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence            4799999999999999999999998753      47999999999999999999999999998643  344433456899


Q ss_pred             eeehhHHHHHHHHHHhhHHHHHHHHHHhCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 028477          113 FFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSLISSYKL  186 (208)
Q Consensus       113 ~f~~Dqv~ayLL~SAasAAaaia~l~~~G~~~~~W~~vC~~~~~FC~~~~~SvalsflA~v~l~l~s~iS~~~L  186 (208)
                      +|++||+++||++||++||++++|++|+||++.+|+++|+++++||+|+.+|++++|+|++++++++++|++++
T Consensus        81 ~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        81 LFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999975

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=7.7e-37  Score=246.98  Aligned_cols=141  Identities=40%  Similarity=0.709  Sum_probs=129.1

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHhcCCcccc----cceeeccchhHHHHHHHHHHHHHHHHHHHHHHH--hcC--CC
Q 028477           34 AALRTAEPIARLVPMALCVAALVLMLKNSETSDF----GSLSYSDLGAFRYLVHANGICAGYSLLSAIIAA--MPR--PS  105 (208)
Q Consensus        34 ~~~~~~~lvLRv~a~~~slaA~vvM~t~~qt~~~----~~~~fs~~~af~ylVaan~I~~~Ysllql~~~~--i~r--~~  105 (208)
                      |..+..+++||+++++++++|+++|++|+||.++    .+.+|+|+++|+|+|++|+|+|+|+++|++...  +.+  .+
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~~~   80 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGKLR   80 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence            4568899999999999999999999999998765    478999999999999999999999999998543  322  24


Q ss_pred             CCcceEeeeehhHHHHHHHHHHhhHHHHHHHHHHhCCcccccccccccccchhhhHHHHHHHHHHHHHH
Q 028477          106 TMSQAWTFFFLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVAC  174 (208)
Q Consensus       106 ~~~~~~~~f~~Dqv~ayLL~SAasAAaaia~l~~~G~~~~~W~~vC~~~~~FC~~~~~SvalsflA~v~  174 (208)
                      .+...|++|++||+++||++||++||+++++++++|+++.+|+++|+.+++||+|+++|++++|+|+++
T Consensus        81 ~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   81 SKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            567789999999999999999999999999999999999999999999999999999999999999974

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.49  E-value=2.8e-06  Score=66.21  Aligned_cols=139  Identities=14%  Similarity=0.138  Sum_probs=98.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhcCCcccccceeeccchhHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCcceEeee
Q 028477           37 RTAEPIARLVPMALCVAALVLMLKNSETSDFGSLSYSDLGAFRYLVHANGICAGYSLLSAIIAAMP--RPSTMSQAWTFF  114 (208)
Q Consensus        37 ~~~~lvLRv~a~~~slaA~vvM~t~~qt~~~~~~~fs~~~af~ylVaan~I~~~Ysllql~~~~i~--r~~~~~~~~~~f  114 (208)
                      +....+||+++++++++.+.+++....+..  .......+...|.+.+.++...+++..++.....  .....+..+.++
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   80 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGS--QIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFSLKYRPRIPWPLVEF   80 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhccc--cccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhHH
Confidence            456789999999999999999998874211  1235566788999999999999988877754432  223344455789


Q ss_pred             ehhHHHHHHHHHHhhHHHHHHHHHHhCCcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHH
Q 028477          115 FLDQLLTYLILAAGAVSTEVLYLERKGDLAITWSAVCGSFGGFCHKAIASVIITFVAVACYVVLSL  180 (208)
Q Consensus       115 ~~Dqv~ayLL~SAasAAaaia~l~~~G~~~~~W~~vC~~~~~FC~~~~~SvalsflA~v~l~l~s~  180 (208)
                      +.|.+++.+-+.+..+-+.-....+.+++   +...+...++-|+...++.+++|++++++..+.+
T Consensus        81 ~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   81 IFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999998877665422111111111   2233444567799999999999999999988765

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00