Citrus Sinensis ID: 028502
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 208 | ||||||
| 255540123 | 297 | conserved hypothetical protein [Ricinus | 0.975 | 0.683 | 0.754 | 1e-81 | |
| 449503339 | 291 | PREDICTED: bidirectional sugar transport | 0.975 | 0.697 | 0.686 | 1e-77 | |
| 449454808 | 291 | PREDICTED: bidirectional sugar transport | 0.975 | 0.697 | 0.681 | 3e-76 | |
| 449503337 | 294 | PREDICTED: bidirectional sugar transport | 0.971 | 0.687 | 0.665 | 6e-76 | |
| 449472119 | 295 | PREDICTED: bidirectional sugar transport | 0.971 | 0.684 | 0.665 | 9e-76 | |
| 449454810 | 295 | PREDICTED: bidirectional sugar transport | 0.971 | 0.684 | 0.660 | 3e-75 | |
| 357464993 | 311 | Protein RUPTURED POLLEN GRAIN [Medicago | 0.956 | 0.639 | 0.653 | 2e-74 | |
| 224136248 | 275 | predicted protein [Populus trichocarpa] | 0.971 | 0.734 | 0.666 | 6e-74 | |
| 15237803 | 285 | MTN3-like protein [Arabidopsis thaliana] | 0.932 | 0.680 | 0.666 | 7e-72 | |
| 356516515 | 309 | PREDICTED: bidirectional sugar transport | 0.942 | 0.634 | 0.678 | 3e-71 |
| >gi|255540123|ref|XP_002511126.1| conserved hypothetical protein [Ricinus communis] gi|223550241|gb|EEF51728.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/204 (75%), Positives = 182/204 (89%), Gaps = 1/204 (0%)
Query: 1 MTMFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLW 60
M +F+TH+PSVF FGLLGNIVSF+VFLAP+PTF RVCKKKSTEGFQS PYVV+LFSAMLW
Sbjct: 1 MAIFNTHNPSVFVFGLLGNIVSFVVFLAPVPTFLRVCKKKSTEGFQSFPYVVSLFSAMLW 60
Query: 61 IYYAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARLYTLRLLLLLNFGGFGSILL 120
+YYA +K DAFLLITIN+ GC+IETIY+ L+IT+APKQAR+ TL++LLLLNFGGF ILL
Sbjct: 61 LYYASLKSDAFLLITINSVGCLIETIYITLFITYAPKQARITTLKILLLLNFGGFCLILL 120
Query: 121 LSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVEFMPFYLSLFLTLNAV 180
LSHFLAKGS R +LGWVCV+FSVSVFAAPLS+MR+V+RTKSVEFMPFYLS FLTL+A+
Sbjct: 121 LSHFLAKGS-ERATILGWVCVIFSVSVFAAPLSVMRIVIRTKSVEFMPFYLSFFLTLSAI 179
Query: 181 MWFFYGLFLKDVYVAVSSFLAQIY 204
MW FYGL LKD+Y+AV + L ++
Sbjct: 180 MWLFYGLLLKDLYIAVPNILGLVF 203
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449503339|ref|XP_004161953.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449454808|ref|XP_004145146.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] gi|449472123|ref|XP_004153502.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449503337|ref|XP_004161952.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449472119|ref|XP_004153501.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449454810|ref|XP_004145147.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357464993|ref|XP_003602778.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] gi|355491826|gb|AES73029.1| Protein RUPTURED POLLEN GRAIN [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224136248|ref|XP_002322282.1| predicted protein [Populus trichocarpa] gi|222869278|gb|EEF06409.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|15237803|ref|NP_197755.1| MTN3-like protein [Arabidopsis thaliana] gi|75100713|sp|O82587.1|SWT12_ARATH RecName: Full=Bidirectional sugar transporter SWEET12; Short=AtSWEET12; AltName: Full=MtN3-like protein gi|3747111|gb|AAC64192.1| MTN3 homolog [Arabidopsis thaliana] gi|8809694|dbj|BAA97235.1| MtN3-like protein [Arabidopsis thaliana] gi|15982723|gb|AAL09814.1| putative MtN3 protein [Arabidopsis thaliana] gi|16323440|gb|AAL15214.1| putative MtN3 protein [Arabidopsis thaliana] gi|21358848|gb|AAM47150.1| putative MtN3 protein [Arabidopsis thaliana] gi|332005812|gb|AED93195.1| MTN3-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356516515|ref|XP_003526939.1| PREDICTED: bidirectional sugar transporter SWEET12-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 208 | ||||||
| UNIPROTKB|P93332 | 268 | N3 "Bidirectional sugar transp | 0.961 | 0.746 | 0.537 | 9.9e-55 | |
| TAIR|locus:2171721 | 285 | SWEET12 [Arabidopsis thaliana | 0.932 | 0.680 | 0.543 | 9.9e-55 | |
| TAIR|locus:2157951 | 294 | SWEET13 [Arabidopsis thaliana | 0.947 | 0.670 | 0.572 | 4.3e-54 | |
| UNIPROTKB|B8BKP4 | 303 | SWEET14 "Bidirectional sugar t | 0.956 | 0.656 | 0.55 | 8.9e-54 | |
| UNIPROTKB|Q2R3P9 | 303 | SWEET14 "Bidirectional sugar t | 0.956 | 0.656 | 0.55 | 8.9e-54 | |
| TAIR|locus:2114540 | 289 | SWEET11 [Arabidopsis thaliana | 0.956 | 0.688 | 0.52 | 1e-52 | |
| TAIR|locus:2117263 | 281 | SWEET14 [Arabidopsis thaliana | 0.947 | 0.701 | 0.562 | 1.7e-52 | |
| UNIPROTKB|A2X5B4 | 319 | SWEET15 "Bidirectional sugar t | 0.923 | 0.601 | 0.528 | 4.4e-52 | |
| UNIPROTKB|Q6K602 | 319 | SWEET15 "Bidirectional sugar t | 0.923 | 0.601 | 0.528 | 4.4e-52 | |
| TAIR|locus:2179867 | 292 | SAG29 "senescence-associated g | 0.942 | 0.671 | 0.489 | 5.1e-51 |
| UNIPROTKB|P93332 N3 "Bidirectional sugar transporter N3" [Medicago truncatula (taxid:3880)] | Back alignment and assigned GO terms |
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Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 108/201 (53%), Positives = 136/201 (67%)
Query: 3 MFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIY 62
M +H+ F FG+LGN++SF+VFLAP+ TFYR+ KKKSTEGFQSLPY+VALFS+MLW+Y
Sbjct: 1 MAISHNTLAFTFGMLGNVISFLVFLAPISTFYRIYKKKSTEGFQSLPYLVALFSSMLWLY 60
Query: 63 YAMMKKDAFLLITINAFGCVIETIYLALYITFAPKQARXXXXXXXXXXXXXXXXXXXXXX 122
YA++KKDAFLLITIN+FGCV+ETIY+ LYI +AP+ AR
Sbjct: 61 YALLKKDAFLLITINSFGCVVETIYIILYIIYAPRDARNLTFKLLSAMNVGSFALILIVT 120
Query: 123 XXXAKGSAARLRLLGWVCXXXXXXXXXXPLSIMRLVVRTKSVEFMPFYLSLFLTLNAVMW 182
G R+++LGWVC PLSI+ VVRTKSVEFMPF LS LTL+A MW
Sbjct: 121 NYAVHGPL-RVQVLGWVCVSLSVSVFAAPLSIVAQVVRTKSVEFMPFNLSFTLTLSATMW 179
Query: 183 FFYGLFLKDVYVAVSSFLAQI 203
F YG FLKD+ + + + L +
Sbjct: 180 FGYGFFLKDICIXLPNVLGXV 200
|
|
| TAIR|locus:2171721 SWEET12 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2157951 SWEET13 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B8BKP4 SWEET14 "Bidirectional sugar transporter SWEET14" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2R3P9 SWEET14 "Bidirectional sugar transporter SWEET14" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2114540 SWEET11 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2117263 SWEET14 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2X5B4 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6K602 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2179867 SAG29 "senescence-associated gene 29" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 208 | |||
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 4e-25 | |
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 4e-17 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Score = 93.4 bits (233), Expect = 4e-25
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 12 FAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKKDAF 71
F GLL + S VFL+P+ +V K KS EG LP++ L SA LW+ Y ++KKD +
Sbjct: 1 FLLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGY 60
Query: 72 LLITINAFGCVIETIYLALYITFAPKQA 99
+I N GCV+ TIYL L+I + PK+A
Sbjct: 61 -IIIPNGVGCVLGTIYLILFIIYPPKKA 87
|
This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 208 | |||
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 100.0 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.88 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.75 | |
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 99.67 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.33 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.3 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 98.81 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 98.31 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 98.17 | |
| KOG2913 | 260 | consensus Predicted membrane protein [Function unk | 96.51 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.36 | |
| PHA02246 | 192 | hypothetical protein | 96.1 | |
| KOG3211 | 230 | consensus Predicted endoplasmic reticulum membrane | 96.04 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 95.11 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 94.59 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 93.68 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 91.59 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 91.28 | |
| PHA02246 | 192 | hypothetical protein | 87.93 | |
| PF07578 | 72 | LAB_N: Lipid A Biosynthesis N-terminal domain; Int | 82.75 | |
| PF07578 | 72 | LAB_N: Lipid A Biosynthesis N-terminal domain; Int | 82.72 | |
| PF10688 | 163 | Imp-YgjV: Bacterial inner membrane protein; InterP | 82.65 |
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-45 Score=306.45 Aligned_cols=197 Identities=49% Similarity=0.890 Sum_probs=177.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHhcHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHHHHhhcc-CcceeehhhhHHHHHHH
Q 028502 7 HDPSVFAFGLLGNIVSFIVFLAPMPTFYRVCKKKSTEGFQSLPYVVALFSAMLWIYYAMMKK-DAFLLITINAFGCVIET 85 (208)
Q Consensus 7 ~~~~~~i~g~l~~v~si~~~~splp~~~~i~k~kst~~~s~~p~~~~~~n~~lW~~YG~l~~-d~~~i~~~N~~g~~l~~ 85 (208)
.+.....+|.+|.+.++++|++|+|+++||+|+||+|+.++.||+++.+||.+|+.||.+++ |. .++..|++|..+++
T Consensus 2 ~~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~d~-llitIN~~G~~ie~ 80 (243)
T KOG1623|consen 2 GNVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVHDY-LLITINGIGLVIET 80 (243)
T ss_pred cchHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccCce-EEEEEehhcHHHHH
Confidence 35677899999999999999999999999999999999999999999999999999999888 76 47889999999999
Q ss_pred HHHhhHhhcccchhHHHHHHHHHHHHHHHHHHHHhhhheeecchhHHHHhhhhHHHHHHHHHhhcchhhhhHHhhcCCCC
Q 028502 86 IYLALYITFAPKQARLYTLRLLLLLNFGGFGSILLLSHFLAKGSAARLRLLGWVCVVFSVSVFAAPLSIMRLVVRTKSVE 165 (208)
Q Consensus 86 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~G~~~~~~~i~~~~sPL~~i~~vi~tk~~~ 165 (208)
+|+..|+.|+++|++...+ .....+.++++++.++...|+++++.+.+|.+|++++++||+|||..+++|+|+||+|
T Consensus 81 ~Yi~~f~~ya~~k~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE 157 (243)
T KOG1623|consen 81 VYISIFLYYAPKKKTVKIV---LALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVE 157 (243)
T ss_pred HHHHHHheecCchheeEee---ehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCcee
Confidence 9999999999987733211 1222334555666777778888888999999999999999999999999999999999
Q ss_pred ccChHHHHHHHHHHHHHHHHhhhcCCeeEEechHHHHHHHhc
Q 028502 166 FMPFYLSLFLTLNAVMWFFYGLFLKDVYVAVSSFLAQIYIYT 207 (208)
Q Consensus 166 ~i~~~~~~~~~~~~~~W~~YG~~~~D~~i~~pN~~g~~l~~~ 207 (208)
+||++++.+.++++..|++||++++|.|+.+||++|.++|+.
T Consensus 158 ~mPf~Ls~a~fl~a~~W~lYGlli~D~~IaipN~iG~~l~~~ 199 (243)
T KOG1623|consen 158 YMPFPLSFALFLVAVQWLLYGLLIKDFFIAIPNVLGFLLGLI 199 (243)
T ss_pred eechHHHHHHHHHHHHHHHHHHHhcCeEEEcccHHHHHHHHH
Confidence 999999999999999999999999999999999999999863
|
|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
|---|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
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| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
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| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
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| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
|---|
| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
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| >KOG2913 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
| >PHA02246 hypothetical protein | Back alignment and domain information |
|---|
| >KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] | Back alignment and domain information |
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| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
|---|
| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
|---|
| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PHA02246 hypothetical protein | Back alignment and domain information |
|---|
| >PF07578 LAB_N: Lipid A Biosynthesis N-terminal domain; InterPro: IPR011499 This domain is found at the N terminus of a group of Chlamydial lipid A biosynthesis proteins | Back alignment and domain information |
|---|
| >PF07578 LAB_N: Lipid A Biosynthesis N-terminal domain; InterPro: IPR011499 This domain is found at the N terminus of a group of Chlamydial lipid A biosynthesis proteins | Back alignment and domain information |
|---|
| >PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 208 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 2e-04
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 25/131 (19%)
Query: 2 TMFSTHDPSVFAFGLLGNIVSFIVFLAPMPTFYR-----VCKKKSTEGFQSL-------- 48
+ +T V F L + I T + K Q L
Sbjct: 268 ILLTTRFKQVTDF-LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN 326
Query: 49 PYVVALFSAML------WIYYAMMKKDAFLLITINAFGCVIE-TIYLALYITFA--PKQA 99
P +++ + + W + + D L I + V+E Y ++ + P A
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDK-LTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385
Query: 100 RLYTLRLLLLL 110
+ LL L+
Sbjct: 386 HI-PTILLSLI 395
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00