Citrus Sinensis ID: 028590

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------
Protein Sequence
MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSACKNGFPRYHPKIPKEERAN
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccHHHccc
Coil and Loop (DISEMBL)
MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLpsallsaslspsslslstlsshfndydfryslvdiplISIIRSAVIICVYglcdgprrsrgpylgiTTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSackngfpryhpkipkeeran
Flexible Loop (DISEMBL)
mgffskeeKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIeavsackngfpryhpkipkeeran
Low Complexity Region (SEG)
MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADtllpsallsaslspsslslstlssHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSACKNGFPRYHPKIPKEERAN
Disordered region (IsUnstruct)
**********KIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSAS*******LSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSACKNGFPRY***********
Disordered Region (DISOPRED)
***********IILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSV***********MEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSACKNGFPRYHPKIP******
Disordered Region (DISEMBL)
********KSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSACKNGFPRYHPKIPKEERAN
Disordered Region (DISPRO)
*******EKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSACKNGFPRYHPKIPK*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSACKNGFPRYHPKIPKEERAN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	207
356539961	205	PREDICTED: uncharacterized protein LOC10	0.980	0.990	0.765	2e-78
357461197	216	hypothetical protein MTR_3g070400 [Medic	0.961	0.921	0.753	1e-77
449463028	207	PREDICTED: uncharacterized protein LOC10	0.990	0.990	0.751	2e-75
255587900	253	hydrolase, putative [Ricinus communis] g	0.990	0.810	0.751	4e-71
224101137	206	predicted protein [Populus trichocarpa]	0.990	0.995	0.783	3e-70
225448408	201	PREDICTED: uncharacterized protein LOC10	0.971	1.0	0.739	2e-69
30688139	209	Alpha/beta hydrolase related protein [Ar	0.961	0.952	0.647	7e-66
297823919	208	hypothetical protein ARALYDRAFT_483049 [	0.951	0.947	0.640	1e-64
356551462	200	PREDICTED: uncharacterized protein LOC10	0.946	0.98	0.654	4e-64
359486412	197	PREDICTED: uncharacterized protein LOC10	0.937	0.984	0.692	1e-61

>gi|356539961|ref|XP_003538461.1| PREDICTED: uncharacterized protein LOC100795655 [Glycine max]

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/205 (76%), Positives = 179/205 (87%), Gaps = 2/205 (0%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKEEKSK ILR  KTLFFLITM++SLLLFSAPVLL IAD L+PSALLS+    SS 
Sbjct: 1   MGFSSKEEKSKRILRGLKTLFFLITMVISLLLFSAPVLLVIADALVPSALLSSLSQ-SSF 59

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
           S+ TL+SHF++YDFRYSL+DIPL+SIIRS +I CVY LCDGPR S GPYLGITT+CSVLS
Sbjct: 60  SMETLASHFHNYDFRYSLIDIPLVSIIRSFIIFCVYSLCDGPRLSHGPYLGITTMCSVLS 119

Query: 121 LIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYK 180
           L+FVS KA Y+FSV+ IDR  YVRA E+ALF+CS ALAVGH+VVAYRTSCRER+KLLVYK
Sbjct: 120 LMFVSFKAVYIFSVSGIDRSGYVRATEIALFVCSCALAVGHVVVAYRTSCRERRKLLVYK 179

Query: 181 IDIEAVSACKNGFPRYHPKIPKEER 205
           IDIEA+SACKNG+PRY  KIP+EER
Sbjct: 180 IDIEAISACKNGYPRY-LKIPQEER 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461197|ref|XP_003600880.1| hypothetical protein MTR_3g070400 [Medicago truncatula] gi|355489928|gb|AES71131.1| hypothetical protein MTR_3g070400 [Medicago truncatula]

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 156/207 (75%), Positives = 176/207 (85%), Gaps = 8/207 (3%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKEEKSK ILR  KTLFFLITM++SLLLFSAPVLL IAD LLPSALLS +LSP SL
Sbjct: 14  MGFSSKEEKSKRILRVVKTLFFLITMILSLLLFSAPVLLVIADALLPSALLS-TLSPVSL 72

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPR--RSRGPYLGITTICSV 118
           SL+TLSSHF++YDFRYSL+DIPL+SIIRS +I CVY LCDGPR  RSRGPYL ITT+CSV
Sbjct: 73  SLTTLSSHFHNYDFRYSLIDIPLVSIIRSFIIFCVYSLCDGPRLSRSRGPYLCITTMCSV 132

Query: 119 LSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLV 178
           LSL+FVS KA YVF     +   YV   E+ALF+CS ALAVGH+VVAYRTSCRER+KLLV
Sbjct: 133 LSLLFVSFKAVYVFG----NGSGYVGGSEIALFVCSCALAVGHVVVAYRTSCRERRKLLV 188

Query: 179 YKIDIEAVSACKNGFPRYHPKIPKEER 205
           YKIDIE++SAC NG+PRY PKI +EER
Sbjct: 189 YKIDIESISACTNGYPRY-PKILQEER 214

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463028|ref|XP_004149236.1| PREDICTED: uncharacterized protein LOC101213138 isoform 1 [Cucumis sativus] gi|449463030|ref|XP_004149237.1| PREDICTED: uncharacterized protein LOC101213138 isoform 2 [Cucumis sativus] gi|449520685|ref|XP_004167364.1| PREDICTED: uncharacterized LOC101213138 isoform 1 [Cucumis sativus] gi|449520687|ref|XP_004167365.1| PREDICTED: uncharacterized LOC101213138 isoform 2 [Cucumis sativus]

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/209 (75%), Positives = 177/209 (84%), Gaps = 4/209 (1%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKEEKSK + R  KTLFFLITML+SLLLFSAPVLL +AD LLPSALLSASL P S 
Sbjct: 1   MGF-SKEEKSKRLWRGIKTLFFLITMLISLLLFSAPVLLVLADALLPSALLSASLYPYSF 59

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
           SL +L S+ ++YDFR SLVDIPLIS IRSA+IICVY  CDGPR S GPYLGITT CSV+S
Sbjct: 60  SLKSLPSYLSNYDFRSSLVDIPLISFIRSAIIICVYSFCDGPRLSHGPYLGITTFCSVIS 119

Query: 121 LIFVSLKASYVF--SVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLV 178
           L+FVSLKAS+VF   + D+ RG YVR+ME+ALF+CSLALAVGH+ VAYRTSCRER+KLLV
Sbjct: 120 LVFVSLKASFVFGDGLRDVGRGGYVRSMEVALFMCSLALAVGHVAVAYRTSCRERRKLLV 179

Query: 179 YKIDIEAVSACKNGFPRYHPKIPKEERAN 207
           YKIDIEAVSACK+GFPRY  KI +EER  
Sbjct: 180 YKIDIEAVSACKSGFPRYQ-KILQEERVK 207

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587900|ref|XP_002534435.1| hydrolase, putative [Ricinus communis] gi|223525303|gb|EEF27950.1| hydrolase, putative [Ricinus communis]

 Score =  273 bits (697), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 160/213 (75%), Positives = 177/213 (83%), Gaps = 8/213 (3%)

Query: 1   MGFFSKEEKSKI-ILRAFKTLFFLITMLVSLLLFSAPVLLAIADT-LLPSALLSASLSPS 58
           MGF +KE +S I +LR  KTLFFLIT+L+S L+FSAPVLL +ADT L  S L ++    S
Sbjct: 1   MGF-AKEVQSIIRLLRFLKTLFFLITLLISFLVFSAPVLLVLADTLLPFSLLSASLSPSS 59

Query: 59  SLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSV 118
           SLSL TLSSHFN+YDFRYSL+DIPLISIIRSAVIICVY LCDGPR SRGPYLGITTICSV
Sbjct: 60  SLSLKTLSSHFNNYDFRYSLIDIPLISIIRSAVIICVYSLCDGPRLSRGPYLGITTICSV 119

Query: 119 LSLIFVSLKASYVFSVA----DIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERK 174
            SLI+VSLKA YVFSV+    D D+G YVRAME+ALF CS  LA+GHIVVAYRTSCRER+
Sbjct: 120 SSLIYVSLKAPYVFSVSRIEEDHDKGEYVRAMEIALFACSFVLAIGHIVVAYRTSCRERR 179

Query: 175 KLLVYKIDIEAVSACKNGFPRYHPKIPKEERAN 207
           KLLVYKIDIEAVSACKNGFP Y  KIPKEER  
Sbjct: 180 KLLVYKIDIEAVSACKNGFPGYK-KIPKEERVK 211

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101137|ref|XP_002312157.1| predicted protein [Populus trichocarpa] gi|222851977|gb|EEE89524.1| predicted protein [Populus trichocarpa]

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 163/208 (78%), Positives = 179/208 (86%), Gaps = 3/208 (1%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF +KEEKS+ ++R  KTLFFLITML+S LLFSAP+LL IADTLLP +LLSASLSPSSL
Sbjct: 1   MGF-AKEEKSRRVVRGVKTLFFLITMLISFLLFSAPILLVIADTLLPFSLLSASLSPSSL 59

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
           S  TLSS FN+YDFRYSLVDIPLISIIRSAVIICVY LCDGPR SRGPYLGITT+CSV S
Sbjct: 60  SSETLSSLFNNYDFRYSLVDIPLISIIRSAVIICVYSLCDGPRLSRGPYLGITTMCSVSS 119

Query: 121 LIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYK 180
           LI+VS KA  VF V+ +DRG +V AME+ALFICSL LA+GHI VAYRTSCRER+KLLVYK
Sbjct: 120 LIYVSFKAPRVFRVSSMDRGEHVIAMEIALFICSLLLAIGHIAVAYRTSCRERRKLLVYK 179

Query: 181 IDIEAVSACKN-GFPRYHPKIPKEERAN 207
           IDIEAVSACKN  FPRYH KI  EER  
Sbjct: 180 IDIEAVSACKNVVFPRYH-KILLEERVK 206

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448408|ref|XP_002273406.1| PREDICTED: uncharacterized protein LOC100257064 isoform 1 [Vitis vinifera] gi|297736619|emb|CBI25490.3| unnamed protein product [Vitis vinifera]

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/207 (73%), Positives = 175/207 (84%), Gaps = 6/207 (2%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKE+KS+ +LR FKTLFFLITM+VS LLFSAPVL+ IADTLLP AL+SASLSPSSL
Sbjct: 1   MGF-SKEDKSRRVLRGFKTLFFLITMVVSFLLFSAPVLVVIADTLLPCALISASLSPSSL 59

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
           SL TL S+ ++YDFRYS++D+PL SI+RSAVI+CVY  CDGPR SRGPYLGITT+CSV S
Sbjct: 60  SLETLYSNLSNYDFRYSIIDVPLTSIVRSAVILCVYSFCDGPRLSRGPYLGITTMCSVSS 119

Query: 121 LIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYK 180
           L+FVSLKASYVFS +  D+G    A+E ALFICS+ LAV HI VAYR SCRER+KLLVYK
Sbjct: 120 LVFVSLKASYVFSGSSTDQG----AIEAALFICSVVLAVAHIFVAYRISCRERRKLLVYK 175

Query: 181 IDIEAVSACKNGFPRYHPKIPKEERAN 207
           IDIEAVSA KNGFPRY  KI +EER  
Sbjct: 176 IDIEAVSAYKNGFPRYQ-KILQEERVK 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30688139|ref|NP_850325.1| Alpha/beta hydrolase related protein [Arabidopsis thaliana] gi|26449647|dbj|BAC41948.1| unknown protein [Arabidopsis thaliana] gi|30017255|gb|AAP12861.1| At2g40095 [Arabidopsis thaliana] gi|330254683|gb|AEC09777.1| Alpha/beta hydrolase related protein [Arabidopsis thaliana]

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 138/213 (64%), Positives = 160/213 (75%), Gaps = 14/213 (6%)

Query: 1   MGFFSKEEKSKI------ILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSAS 54
           MGF SKEE SK       + R  KT+F L TM  S LL SAP+ LA+AD LLPSALL   
Sbjct: 1   MGF-SKEEISKTRKLWSSLWRGIKTIFVLFTMFFSFLLVSAPIFLAVADALLPSALLHRF 59

Query: 55  LSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITT 114
            SP+     TLSSH  +YDFR+SL+DIPLISIIRSAVI+CVYGLCDGP+ SRGPYL IT 
Sbjct: 60  SSPA-----TLSSHLTNYDFRHSLIDIPLISIIRSAVILCVYGLCDGPKLSRGPYLTITM 114

Query: 115 ICSVLSLIFVSLKASYVFSVADIDR--GVYVRAMEMALFICSLALAVGHIVVAYRTSCRE 172
           ICS+ SLI+VSLKA++VF    I    G Y RA E+ALF+CS  LA+GHIVVAYRTSCRE
Sbjct: 115 ICSISSLIYVSLKAAFVFGEPAIGDGGGNYFRAAEVALFLCSSVLAIGHIVVAYRTSCRE 174

Query: 173 RKKLLVYKIDIEAVSACKNGFPRYHPKIPKEER 205
           RKKLLV+KIDIEAVSACKN +PRY   + ++ER
Sbjct: 175 RKKLLVFKIDIEAVSACKNVYPRYQKILLQQER 207

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823919|ref|XP_002879842.1| hypothetical protein ARALYDRAFT_483049 [Arabidopsis lyrata subsp. lyrata] gi|297325681|gb|EFH56101.1| hypothetical protein ARALYDRAFT_483049 [Arabidopsis lyrata subsp. lyrata]

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 163/214 (76%), Gaps = 17/214 (7%)

Query: 1   MGFFSKEEKSKI------ILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSAS 54
           MGF SKEE SK       + R  KT+F L TM +S LL SAP+ LA+AD LLPSALL   
Sbjct: 1   MGF-SKEEISKTRKLSSSLWRGIKTVFVLFTMFLSFLLVSAPIFLAVADALLPSALLHRF 59

Query: 55  LSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITT 114
            SP++LS     SH  +YDFR+SL+DIPLISIIRSAVI+CVYGLCDGP+ SRGPYL +T 
Sbjct: 60  SSPANLS-----SHLTNYDFRHSLIDIPLISIIRSAVILCVYGLCDGPKLSRGPYLTVTM 114

Query: 115 ICSVLSLIFVSLKASYVF---SVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCR 171
           ICSV SL++VSLKA++VF   S+ D   G Y RA E+ALF+CS  LA+ HI+VAYRTSCR
Sbjct: 115 ICSVSSLVYVSLKAAFVFGEPSIGD-GGGNYFRAAEVALFLCSSVLAISHIIVAYRTSCR 173

Query: 172 ERKKLLVYKIDIEAVSACKNGFPRYHPKIPKEER 205
           ERKKLLV+KIDIEAVSACKN +PRY  KI ++ER
Sbjct: 174 ERKKLLVFKIDIEAVSACKNVYPRYQ-KILQQER 206

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551462|ref|XP_003544094.1| PREDICTED: uncharacterized protein LOC100806343 [Glycine max]

 Score =  249 bits (636), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 138/211 (65%), Positives = 163/211 (77%), Gaps = 15/211 (7%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKEEKSK + R  K +FFLITM++SLLLFSAPVLL IAD L+PSALLSA  SPSSL
Sbjct: 1   MGF-SKEEKSKRVWRGVKVVFFLITMVISLLLFSAPVLLVIADALVPSALLSA-FSPSSL 58

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
                 SHF++YDF YSL+DIPL+S+ RS VI+CVY  CDG R S GPYLG+T +CSV+S
Sbjct: 59  F-----SHFDNYDFGYSLIDIPLLSMARSLVILCVYSFCDGQRLSHGPYLGVTMLCSVMS 113

Query: 121 LIFVSLKASYVFSV---ADIDRGV-YVRAMEMALFICSLALAVGHIVVAYRTSCRERKKL 176
           L+FV LKA YVFS+    D  RG  Y R+ ++ALF+ S ALAVGH+VVAYRTSCRER+KL
Sbjct: 114 LMFVCLKAVYVFSLNTSVDERRGSGYDRSSQIALFVWSCALAVGHVVVAYRTSCRERRKL 173

Query: 177 LVYKIDIEAVSACKNGFPRYHPKIPKEERAN 207
           LVYKIDIEA+SA KNG+     KI +EER  
Sbjct: 174 LVYKIDIEAISAFKNGY----SKILQEERVK 200

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486412|ref|XP_003633440.1| PREDICTED: uncharacterized protein LOC100257064 isoform 2 [Vitis vinifera]

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/205 (69%), Positives = 166/205 (80%), Gaps = 11/205 (5%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKE+KS+ +LR FKTLFFLITM+VS LLFSAPVL+ IADTLLP AL+SASLSPSSL
Sbjct: 1   MGF-SKEDKSRRVLRGFKTLFFLITMVVSFLLFSAPVLVVIADTLLPCALISASLSPSSL 59

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
           SL TL S+ ++YDFRYS++D+PL SI+RSAVI+CVY  CDGPR SRGPYLGITT+CSV S
Sbjct: 60  SLETLYSNLSNYDFRYSIIDVPLTSIVRSAVILCVYSFCDGPRLSRGPYLGITTMCSVSS 119

Query: 121 LIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYK 180
           L+FVSLKASYVFS +  D+G    A+E ALFICS+ LAV HI VAYR SCRER+KLLVYK
Sbjct: 120 LVFVSLKASYVFSGSSTDQG----AIEAALFICSVVLAVAHIFVAYRISCRERRKLLVYK 175

Query: 181 IDIEAVSACKNGFPRYHPKIPKEER 205
           IDIEA+   K        + P +ER
Sbjct: 176 IDIEAMVHSKGN------QKPGDER 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	207
TAIR|locus:504956035	209	AT2G40095 "AT2G40095" [Arabido	0.961	0.952	0.586	1.4e-55
TAIR|locus:2082043	215	SUE4 "AT3G55880" [Arabidopsis	0.975	0.939	0.564	3.7e-55
TAIR|locus:2034220	647	AT1G80280 [Arabidopsis thalian	0.932	0.298	0.391	8.8e-32
TAIR|locus:2037828	648	AT1G15490 [Arabidopsis thalian	0.884	0.282	0.385	1.7e-29
TAIR|locus:2011476	633	AT1G52750 [Arabidopsis thalian	0.859	0.281	0.368	1.2e-23

TAIR|locus:504956035 AT2G40095 "AT2G40095" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 125/213 (58%), Positives = 146/213 (68%)

Query:     1 MGFFSKEEKSKI------ILRAFKTLFFLITMLVSLLLFSAPVLLAIADXXXXXXXXXXX 54
             MGF SKEE SK       + R  KT+F L TM  S LL SAP+ LA+AD           
Sbjct:     1 MGF-SKEEISKTRKLWSSLWRGIKTIFVLFTMFFSFLLVSAPIFLAVADALLPSALLHRF 59

Query:    55 XXXXXXXXXXXXXHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITT 114
                          H  +YDFR+SL+DIPLISIIRSAVI+CVYGLCDGP+ SRGPYL IT 
Sbjct:    60 SSPATLSS-----HLTNYDFRHSLIDIPLISIIRSAVILCVYGLCDGPKLSRGPYLTITM 114

Query:   115 ICSVLSLIFVSLKASYVFSVADIDRGV--YVRAMEMALFICSLALAVGHIVVAYRTSCRE 172
             ICS+ SLI+VSLKA++VF    I  G   Y RA E+ALF+CS  LA+GHIVVAYRTSCRE
Sbjct:   115 ICSISSLIYVSLKAAFVFGEPAIGDGGGNYFRAAEVALFLCSSVLAIGHIVVAYRTSCRE 174

Query:   173 RKKLLVYKIDIEAVSACKNGFPRYHPKIPKEER 205
             RKKLLV+KIDIEAVSACKN +PRY   + ++ER
Sbjct:   175 RKKLLVFKIDIEAVSACKNVYPRYQKILLQQER 207

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2082043 SUE4 "AT3G55880" [Arabidopsis thaliana (taxid:3702)]

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 122/216 (56%), Positives = 146/216 (67%)

Query:     1 MGFFSKEEKSKI------ILRAFKTLFFLITMLVSLLLFSAPVLLAIADXXXXXXXXXXX 54
             MG  SKEE SK       + R  KT+F L TM +S ++FSAP+ LA+AD           
Sbjct:     1 MGLISKEEISKTRRYSSSLWRGIKTIFVLFTMFLSFIIFSAPIFLAVADAVLPSAILSSS 60

Query:    55 XXXXXXXX-----XXXXXHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPY 109
                               + ++YDFRYSL+DIPLISIIRSA+I+CVYGLCDGP+ SRGPY
Sbjct:    61 SPSLNRLSPSSFPATIYSYLSNYDFRYSLIDIPLISIIRSAIILCVYGLCDGPKLSRGPY 120

Query:   110 LGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTS 169
             L IT ICS+ SLI+VS KA+ VF    I  G Y R  EMALF+CS  LA+GHIVVAYRTS
Sbjct:   121 LTITMICSISSLIYVSFKAAIVFGEPVI--GGYFRTEEMALFLCSWILAIGHIVVAYRTS 178

Query:   170 CRERKKLLVYKIDIEAVSACKNGFPRYHPKIPKEER 205
             CRER+KLLV+KIDIE+VSACKN FPRY  KI ++ER
Sbjct:   179 CRERRKLLVFKIDIESVSACKNVFPRYQ-KILQQER 213

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009970 "cellular response to sulfate starvation" evidence=IMP

TAIR|locus:2034220 AT1G80280 [Arabidopsis thaliana (taxid:3702)]

 Score = 355 (130.0 bits), Expect = 8.8e-32, P = 8.8e-32
 Identities = 83/212 (39%), Positives = 128/212 (60%)

Query:     2 GFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADXXXXXXXXXXXXXXXXXX 61
             G+F  E K++   R  +T+FF++ MLVSLL+ S PVL+AI D                  
Sbjct:     4 GWFMVE-KAR---RCLRTVFFMVAMLVSLLVSSLPVLVAIGDVLVPTFLLSSFTCLTCYG 59

Query:    62 XXXXXXHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSL 121
                   H + Y F+ SL DIPL+S++RS ++ICVY L D P  S GPYLG  ++CSV+S+
Sbjct:    60 FKE---HLSRYAFKSSLTDIPLVSLVRSFLVICVYSLSDAPALSHGPYLGTVSLCSVVSV 116

Query:   122 IFVSLKASYVFSVADID---------RGVYVR-AMEM-ALFICSLALAVGHIVVAYRTSC 170
             + +S+KA    + + ++         + ++++ +  M  LF+ S+  A+GH+VVAYRTSC
Sbjct:   117 VLLSVKACVFTANSQLNDQASSSPSRQRLHLKKSWGMPVLFLSSVVFALGHMVVAYRTSC 176

Query:   171 RERKKLLVYKIDIEAVSACKNGFPRYHPKIPK 202
             R R+KLL +++D EAV +CK+ F  Y  K+P+
Sbjct:   177 RARRKLLYHRVDPEAVLSCKSVFSGYQ-KVPR 207

GO:0005737 "cytoplasm" evidence=ISM

GO:0016787 "hydrolase activity" evidence=ISS

TAIR|locus:2037828 AT1G15490 [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 1.7e-29, P = 1.7e-29
 Identities = 77/200 (38%), Positives = 119/200 (59%)

Query:    15 RAFKTLFFLITMLVSLLLFSAPVLLAIADXXXXXXXXXXXXXXXXXXXXXXXXHFNDYDF 74
             R  +T+FF++ ML SLL+ S P+L+AI D                        H   Y F
Sbjct:    13 RCLRTVFFMVAMLASLLVSSLPLLVAIGDVLVPSFLLSSFTCVTCYGAKE---HLRRYGF 69

Query:    75 RYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSV 134
             + SL DIP++S++RS ++IC+Y L D P  S GPYLG  ++CSV+S++ +S+KA  +F+V
Sbjct:    70 KRSLTDIPIVSVVRSFLVICIYLLSDVPALSHGPYLGTVSLCSVVSVLLLSVKAC-LFTV 128

Query:   135 -------ADID---RGVYVR-AMEM-ALFICSLALAVGHIVVAYRTSCRERKKLLVYKID 182
                    A      + ++++ +  M  LF+ S+  A+GH VVAYRTSCR R+K+L +++D
Sbjct:   129 NSQLNNEASFSPSRKRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKILYHRVD 188

Query:   183 IEAVSACKNGFPRYHPKIPK 202
              EAV +CK+ F   H K+P+
Sbjct:   189 PEAVLSCKSIFSG-HQKVPR 207

GO:0005737 "cytoplasm" evidence=ISM

GO:0016787 "hydrolase activity" evidence=ISS

TAIR|locus:2011476 AT1G52750 [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 1.2e-23, P = 1.2e-23
 Identities = 69/187 (36%), Positives = 101/187 (54%)

Query:    15 RAFKTLFFLITMLVSLLLFSAPVLLAIADXXXXXXXXXXXXXXXXXXXXXXXXHFNDYDF 74
             R  +T+FF+  M  SLL  S PVL+ +AD                        HF  Y F
Sbjct:    15 RCLRTMFFVAAMTASLLASSLPVLITVADVVVPCLIVSSITCLTCHSPAQ---HFRQYSF 71

Query:    75 RYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSV 134
             + SL+D+PL+S+IRS VIIC+  LC+  R + G YL    + S   ++ + +K   VF+V
Sbjct:    72 KTSLIDVPLVSLIRSLVIICLSWLCEDTRLAYGLYLETVMLSSFGGILLLLVKTC-VFTV 130

Query:   135 -ADIDRG-VYVRAMEMALFICSLALAV---GHIVVAYRTSCRERKKLLVYKIDIEAVSAC 189
              + ++   VY   +   + +  L+ AV    H+VVAYR SC  R+KL+ +KID EAV +C
Sbjct:   131 NSTLEEAKVYHLKISWGMPVLLLSSAVFGLAHVVVAYRKSCGARRKLMYHKIDQEAVLSC 190

Query:   190 KNGFPRY 196
             K+GF  Y
Sbjct:   191 KSGFSGY 197


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.144   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      207       183   0.00076  110 3  11 21  0.44    31
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  555 (59 KB)
  Total size of DFA:  136 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.19u 0.10s 15.29t   Elapsed:  00:00:01
  Total cpu time:  15.19u 0.10s 15.29t   Elapsed:  00:00:01
  Start:  Sat May 11 02:59:58 2013   End:  Sat May 11 02:59:59 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016787 "hydrolase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_VIII000266 hypothetical protein (206 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	207
PF10457	171	MENTAL: Cholesterol-capturing domain; InterPro: IP	99.49

>PF10457 MENTAL: Cholesterol-capturing domain; InterPro: IPR019498 The following proteins share a conserved region called the MENTAL (MLN64 N-terminal) domain, composed of four transmembrane helices with three short intervening loops [, , ]: Animal MLN64 (metastatic lymph node 64), a late endosomal membrane protein containing a carboxyl-terminal cholesterol binding START domain (IPR002913 from INTERPRO)

Probab=99.49  E-value=1.2e-14  Score=122.03  Aligned_cols=105  Identities=33%  Similarity=0.444  Sum_probs=88.9

Q ss_pred             hhhhhhcccCcccccccchhHHHHHHHHHHHHHHhhcCCCCCCCCchhHHHHHHhhHHHHHHHhhhceecccccccchhh
Q 028590           63 STLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVY  142 (207)
Q Consensus        63 ~~~~~~~~~Y~FrsSLvDIPlvSi~RS~~IlCvY~~Cdgp~Ls~gpYLgit~~cs~~S~~~vsvKA~~Vf~~~~~~~~~~  142 (207)
                      ..+..|..+|+||+||.||++++++|.++++|+|++|   ++.|+.+.++||++|.   .|+.+|+. +|. +...++. 
T Consensus        35 ~~l~~ei~~Y~~~~SLFDivllA~~Rf~vLil~Ya~~---rl~hw~~iaitT~~S~---afli~Kv~-~~~-~~~s~~~-  105 (171)
T PF10457_consen   35 SALQNEINHYDFKTSLFDIVLLAIFRFLVLILFYALL---RLRHWWPIAITTLVSC---AFLIVKVF-FFD-STSSQNA-  105 (171)
T ss_pred             HHHHHHHhheehhhhHHHHHHHHHHHHHHHHHHHHHh---ccCcceEeEeHHhhhh---HHhhheee-EEe-cccCCCC-
Confidence            5699999999999999999999999999999999999   5679999999987654   48889997 664 2222211 


Q ss_pred             HhhhhHHHHHHHHHHHHhHH-HHhhhhhhhhhhhhccc
Q 028590          143 VRAMEMALFICSLALAVGHI-VVAYRTSCRERKKLLVY  179 (207)
Q Consensus       143 ~~~~~~~LflsS~vfAlgHi-vvAYRtSCraRRKLlv~  179 (207)
                         .+-+|+++|+++|-++. ++.||--+|||++.-.+
T Consensus       106 ---~~y~L~I~SfvlaW~E~WfldfrVlPqE~~~~~~~  140 (171)
T PF10457_consen  106 ---FEYLLIITSFVLAWIETWFLDFRVLPQEREAERRY  140 (171)
T ss_pred             ---ceEEehHHHHHHHHHHHHHHhheecchhHHHHHHH
Confidence               23589999999999999 99999999999998655

It is probably involved in intracellular cholesterol transport. Mammalian MENTHO (MLN64 N-terminal domain homologue), a late endosomal protein containing only the MENTAL domain. It is probably involved in cellular cholesterol homoeostasis. The ~170-amino acid MENTAL domain mediates MLN64 and MENTHO homo- and hetero- interactions, targets both proteins to late endosomes and binds cholesterol. The MENTAL domain might serve to maintain cholesterol at the membrane of late endosomes prior to its shuttle to cytoplasmic acceptor(s) through the START domain.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00