Citrus Sinensis ID: 028822

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
Protein Sequence
MAPSKTTSPLPPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEVKQEYHVRF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccEEEHHHHHHHHHHHHEEEEEEccccEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEccccEEEEEccEEEEEEEccEEEEEEEEcccEEcccEEEEEEEEEEEEEEEEcccHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccEcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEccccEEEEEccEEEEEEEcccEEEEEEcccccccccccEEEEEEEEEEHHHHHHcHHHHHHHHHcccccEEEEEEEcEEEEEEEEEEEEEEEEEEEEEc
Coil and Loop (DISEMBL)
mapskttsplppatpsqphyytvlppqpqdenytilpyyylenprrnwYATIAISLILLAALLYvfwpsepelKIERLHLAHFHVRMKPAIcidislnvtlkvhnrdvysvnyksldvsvgyrgrklghvksnhGRVKALASSFIDAELQLKCVKVLSDVVYLLEDlargtvpfdtitkVTGHLGLFFLEFPLEVKQEYHVRF
Flexible Loop (DISEMBL)
mapskttsplppatpsqPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVhnrdvysvnyksldvsvgyrGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEVKQEYHVRF
Low Complexity Region (SEG)
MAPSKTTSPLPPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATiaislillaallYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEVKQEYHVRF
Disordered region (IsUnstruct)
********************YTVL******ENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEVKQEY****
Disordered Region (DISOPRED)
*****************************************ENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEVKQEYHVRF
Disordered Region (DISEMBL)
**************PSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEVKQEYHVRF
Disordered Region (DISPRO)
***************SQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEVKQEYHVRF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPSKTTSPLPPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEVKQEYHVRF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
255550052	215	conserved hypothetical protein [Ricinus	0.847	0.8	0.521	8e-43
224058874	180	predicted protein [Populus trichocarpa]	0.674	0.761	0.576	5e-40
224073866	181	predicted protein [Populus trichocarpa]	0.768	0.861	0.537	6e-40
297847614	214	hypothetical protein ARALYDRAFT_474353 [	0.896	0.850	0.464	1e-39
15218211	214	late embryogenesis abundant hydroxyproli	0.911	0.864	0.454	6e-39
145324915	227	late embryogenesis abundant hydroxyproli	0.916	0.819	0.452	6e-39
225442653	237	PREDICTED: uncharacterized protein LOC10	0.896	0.767	0.454	1e-38
147820503	224	hypothetical protein VITISV_044045 [Viti	0.881	0.799	0.445	2e-35
297738839	218	unnamed protein product [Vitis vinifera]	0.758	0.706	0.477	5e-35
225445268	212	PREDICTED: uncharacterized protein LOC10	0.758	0.726	0.477	6e-35

>gi|255550052|ref|XP_002516077.1| conserved hypothetical protein [Ricinus communis] gi|223544982|gb|EEF46497.1| conserved hypothetical protein [Ricinus communis]

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/184 (52%), Positives = 124/184 (67%), Gaps = 12/184 (6%)

Query: 19  HYYTVLPPQPQDENYTIL--------PYYYLENPRRNWYATIAISLILLAALLYVFWPSE 70
           HYYT +P Q  D+NY +L        P   L  PRR    T  I   LL +++Y+FWPS+
Sbjct: 16  HYYTPIPCQ-HDDNYVVLQPLDHHRFPTIRLP-PRRILIVTGVI--FLLISVIYLFWPSD 71

Query: 71  PELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHV 130
           P LKI RL L   H+   P I ID+SL+VT+KV N DVYS+++  LD+++ YRG++LGHV
Sbjct: 72  PTLKIVRLRLNKLHIHTLPIINIDVSLHVTVKVRNVDVYSMDFTHLDIALRYRGKRLGHV 131

Query: 131 KSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLE 190
           +S  G V+ALASS++DAEL+   V VLSDVV+LLEDLARG VPFDT+TKV G  G  F  
Sbjct: 132 RSGQGHVRALASSYVDAELEFSGVGVLSDVVFLLEDLARGKVPFDTVTKVDGKFGFLFFG 191

Query: 191 FPLE 194
            PL+
Sbjct: 192 MPLK 195

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058874|ref|XP_002299644.1| predicted protein [Populus trichocarpa] gi|222846902|gb|EEE84449.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 79/137 (57%), Positives = 106/137 (77%)

Query: 60  AALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVS 119
           + L+YVFWPS+P +K+ RL L   H+   P I IDISL V+LKV N DVYS++++SLDV+
Sbjct: 23  STLVYVFWPSDPTVKVVRLRLNKIHIHTLPIINIDISLYVSLKVRNVDVYSMDFRSLDVA 82

Query: 120 VGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITK 179
           V YRG++LGHV+S+HG V+AL SS++ A +    + VLSDVV LL+DLARGTVPFDT+T+
Sbjct: 83  VKYRGKRLGHVRSDHGHVRALGSSYVHAGVDFSGISVLSDVVSLLDDLARGTVPFDTVTE 142

Query: 180 VTGHLGLFFLEFPLEVK 196
           V+G LGL F  FP++ K
Sbjct: 143 VSGRLGLLFFGFPMKAK 159

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224073866|ref|XP_002304190.1| predicted protein [Populus trichocarpa] gi|222841622|gb|EEE79169.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 85/158 (53%), Positives = 117/158 (74%), Gaps = 2/158 (1%)

Query: 46  RNW--YATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKV 103
           R W    T+ + L+LL+AL+YVFWPS+P +K+  L L    +   P I ID+SL VTL+V
Sbjct: 8   RRWPMITTVFLLLLLLSALVYVFWPSDPMIKVVGLRLDKIRIHTLPIINIDLSLYVTLRV 67

Query: 104 HNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYL 163
            N DVYS++++SLDV+V Y+G++LGHV+S+HG V+AL SS++DAE+ L+ + VLS VV L
Sbjct: 68  RNVDVYSMDFRSLDVAVRYKGKRLGHVRSDHGHVRALGSSYVDAEIDLRGISVLSGVVSL 127

Query: 164 LEDLARGTVPFDTITKVTGHLGLFFLEFPLEVKQEYHV 201
           LEDL RGTVPFDT+T+V+G LGL F  FPL+ +    V
Sbjct: 128 LEDLGRGTVPFDTVTEVSGKLGLLFFGFPLKARVSCEV 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847614|ref|XP_002891688.1| hypothetical protein ARALYDRAFT_474353 [Arabidopsis lyrata subsp. lyrata] gi|297337530|gb|EFH67947.1| hypothetical protein ARALYDRAFT_474353 [Arabidopsis lyrata subsp. lyrata]

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/185 (46%), Positives = 122/185 (65%), Gaps = 3/185 (1%)

Query: 13  ATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALL-YVFWPSEP 71
           ATPS P Y   LP    D+N  +L   +     R  +  I+I LI  A++L Y+FWPS+P
Sbjct: 10  ATPSLPDYKP-LPSSSHDQNDAVLISSHSSFTSRRRF-IISIFLISFASILIYIFWPSDP 67

Query: 72  ELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVK 131
            +KI R+ ++H HV  +P   ID++L VTLKV N DVYS ++  LDV++ YRG+ LGHV 
Sbjct: 68  RIKIVRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTLGHVS 127

Query: 132 SNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEF 191
           S+ G V A  SS++DAE +L  V V  DV++L+ DLA+G+V FDT+T+  G+LG++F  F
Sbjct: 128 SDGGHVTAFGSSYLDAEAELDGVTVFPDVIHLIHDLAKGSVEFDTVTETNGNLGVWFFRF 187

Query: 192 PLEVK 196
           PL+ K
Sbjct: 188 PLKAK 192

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218211|ref|NP_175643.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|12323119|gb|AAG51539.1|AC037424_4 hypothetical protein; 44111-43310 [Arabidopsis thaliana] gi|71905457|gb|AAZ52706.1| expressed protein [Arabidopsis thaliana] gi|332194666|gb|AEE32787.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/187 (45%), Positives = 120/187 (64%), Gaps = 2/187 (1%)

Query: 11  PPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALL-YVFWPS 69
           P ATPS P Y  +      + N  +L   +   P R  +  I+I LI  A++L Y+FWPS
Sbjct: 7   PKATPSLPDYKPLPSSSSHELNDAVLISSHPSPPSRRRF-IISIFLISFASILIYIFWPS 65

Query: 70  EPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGH 129
           +P +KI R+ ++H HV  +P   ID++L VTLKV N DVYS ++  LDV++ YRG+ LGH
Sbjct: 66  DPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTLGH 125

Query: 130 VKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFL 189
           V S+ G V A  SS++DAE +L  V V  DV++L+ DLA+G+V FDT+T+  G LG+ F 
Sbjct: 126 VSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLGVLFF 185

Query: 190 EFPLEVK 196
            FPL+ K
Sbjct: 186 RFPLKAK 192

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145324915|ref|NP_001077704.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|60547641|gb|AAX23784.1| hypothetical protein At1g52330 [Arabidopsis thaliana] gi|71905459|gb|AAZ52707.1| expressed protein [Arabidopsis thaliana] gi|332194667|gb|AEE32788.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/188 (45%), Positives = 121/188 (64%), Gaps = 2/188 (1%)

Query: 11  PPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAISLILLAALL-YVFWPS 69
           P ATPS P Y  +      + N  +L   +   P R  +  I+I LI  A++L Y+FWPS
Sbjct: 7   PKATPSLPDYKPLPSSSSHELNDAVLISSHPSPPSRRRF-IISIFLISFASILIYIFWPS 65

Query: 70  EPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGH 129
           +P +KI R+ ++H HV  +P   ID++L VTLKV N DVYS ++  LDV++ YRG+ LGH
Sbjct: 66  DPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTLGH 125

Query: 130 VKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFL 189
           V S+ G V A  SS++DAE +L  V V  DV++L+ DLA+G+V FDT+T+  G LG+ F 
Sbjct: 126 VSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLGVLFF 185

Query: 190 EFPLEVKQ 197
            FPL+V+ 
Sbjct: 186 RFPLKVRN 193

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442653|ref|XP_002279706.1| PREDICTED: uncharacterized protein LOC100258307 [Vitis vinifera]

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 84/185 (45%), Positives = 122/185 (65%), Gaps = 3/185 (1%)

Query: 20  YYTVLPPQPQDE-NYTILPYYY-LENPRRNWYATI-AISLILLAALLYVFWPSEPELKIE 76
           YYT +P  P  E NY +LP Y  L + R N +  + A S++LL A  +V WPS+P++ I 
Sbjct: 36  YYTPVPSHPASERNYVVLPLYIPLLHRRCNRFRLLTAASVLLLVASTFVLWPSDPDVSIV 95

Query: 77  RLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGR 136
           RL L    V   P + +D+S+++ +KV N D+YS+NY+SL V++ YRG++LG+V S  G 
Sbjct: 96  RLRLRRIAVHTFPRLSLDVSMSLMVKVRNVDLYSMNYRSLHVAIEYRGKELGNVTSEEGH 155

Query: 137 VKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEVK 196
           V+A  SS +DA L+L  V VLSDV+++LEDLA+GT+P DT+T+V G +G  F + PL  K
Sbjct: 156 VRARGSSLVDASLELNGVAVLSDVIFVLEDLAKGTIPIDTVTEVRGSMGFLFFQLPLRTK 215

Query: 197 QEYHV 201
               V
Sbjct: 216 VSCQV 220

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147820503|emb|CAN72107.1| hypothetical protein VITISV_044045 [Vitis vinifera]

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 81/182 (44%), Positives = 120/182 (65%), Gaps = 3/182 (1%)

Query: 20  YYTVLPPQPQDE-NYTILPYYY-LENPRRNWYATIAISLILLAAL-LYVFWPSEPELKIE 76
           YYT +P QP  E NY +LP Y  L + R N +  +  + +LL     +V WPS+P++ I 
Sbjct: 30  YYTPVPSQPASERNYVVLPLYIPLLHRRCNRFRLLTAAAVLLLVASTFVLWPSDPDVSIV 89

Query: 77  RLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGR 136
           RL L    V   P + +D+S+++ +KV N D+YS+NY+SL V++ YRG++LG+V S  G 
Sbjct: 90  RLRLRRIAVHTFPRLSLDVSMSLMVKVRNVDLYSMNYRSLHVAIEYRGKELGNVTSEEGH 149

Query: 137 VKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEVK 196
           V+A  SS +DA L+L  V VLSDV+++LEDLA+GT+P DT+T+V G +G  F + PL  +
Sbjct: 150 VRARGSSLVDASLELNGVAVLSDVIFVLEDLAKGTIPIDTVTEVRGSMGFLFFQLPLRDR 209

Query: 197 QE 198
            E
Sbjct: 210 LE 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738839|emb|CBI28084.3| unnamed protein product [Vitis vinifera]

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/155 (47%), Positives = 107/155 (69%), Gaps = 1/155 (0%)

Query: 47  NWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNR 106
           N +   A+ L + AA+ Y+ +PS+P +++  LHL    V   P I +D+SL++T++V NR
Sbjct: 42  NAFLACAVFLSISAAV-YLLYPSDPTVQVVGLHLNSVQVHTSPVISLDLSLDLTIRVRNR 100

Query: 107 DVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLED 166
           D +S +Y SL  SVGYRGR+LG V S+ G ++A  SS+I+A L L  ++VL DV YLLED
Sbjct: 101 DFFSFSYTSLTASVGYRGRRLGFVNSSGGYLRARGSSYINATLDLDGIEVLHDVFYLLED 160

Query: 167 LARGTVPFDTITKVTGHLGLFFLEFPLEVKQEYHV 201
           LARG++PFDT+++V G LGLFF E PL+ +    V
Sbjct: 161 LARGSIPFDTVSEVRGKLGLFFFEIPLKARVSCEV 195

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445268|ref|XP_002284574.1| PREDICTED: uncharacterized protein LOC100254347 [Vitis vinifera]

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 74/155 (47%), Positives = 107/155 (69%), Gaps = 1/155 (0%)

Query: 47  NWYATIAISLILLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNR 106
           N +   A+ L + AA+ Y+ +PS+P +++  LHL    V   P I +D+SL++T++V NR
Sbjct: 42  NAFLACAVFLSISAAV-YLLYPSDPTVQVVGLHLNSVQVHTSPVISLDLSLDLTIRVRNR 100

Query: 107 DVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLED 166
           D +S +Y SL  SVGYRGR+LG V S+ G ++A  SS+I+A L L  ++VL DV YLLED
Sbjct: 101 DFFSFSYTSLTASVGYRGRRLGFVNSSGGYLRARGSSYINATLDLDGIEVLHDVFYLLED 160

Query: 167 LARGTVPFDTITKVTGHLGLFFLEFPLEVKQEYHV 201
           LARG++PFDT+++V G LGLFF E PL+ +    V
Sbjct: 161 LARGSIPFDTVSEVRGKLGLFFFEIPLKARVSCEV 195

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
TAIR|locus:2018154	227	AT1G52330 "AT1G52330" [Arabido	0.911	0.814	0.438	7e-38
TAIR|locus:2142040	215	AT4G13270 "AT4G13270" [Arabido	0.866	0.818	0.408	9.8e-32
TAIR|locus:2080320	235	AT3G54200 "AT3G54200" [Arabido	0.640	0.553	0.251	4.5e-07

TAIR|locus:2018154 AT1G52330 "AT1G52330" [Arabidopsis thaliana (taxid:3702)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 82/187 (43%), Positives = 113/187 (60%)

Query:    11 PPATPSQPHYYTVLPPQPQDE-NYTILPYYYLENPRRNWYATXXXXXXXXXXXXYVFWPS 69
             P ATPS P Y   LP     E N  +L   +   P R  +              Y+FWPS
Sbjct:     7 PKATPSLPDYKP-LPSSSSHELNDAVLISSHPSPPSRRRFIISIFLISFASILIYIFWPS 65

Query:    70 EPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGH 129
             +P +KI R+ ++H HV  +P   ID++L VTLKV N DVYS ++  LDV++ YRG+ LGH
Sbjct:    66 DPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRGKTLGH 125

Query:   130 VKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFL 189
             V S+ G V A  SS++DAE +L  V V  DV++L+ DLA+G+V FDT+T+  G LG+ F 
Sbjct:   126 VSSDGGHVTAFGSSYLDAEAELDGVMVFPDVIHLIHDLAKGSVEFDTVTETNGKLGVLFF 185

Query:   190 EFPLEVK 196
              FPL+V+
Sbjct:   186 RFPLKVR 192

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2142040 AT4G13270 "AT4G13270" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 74/181 (40%), Positives = 108/181 (59%)

Query:    21 YTVLPP-QPQDENYTILPYYYLENPR--RNWYATXXXXXXXX--XXXXYVFWPSEPELKI 75
             YT LP  QP      + PY     P   RN   +              Y+ +PS+P++ +
Sbjct:    13 YTPLPSSQPSQSVILLTPYRRHRRPSLLRNLRCSLLFTAVILLLSAAVYLLYPSDPDITV 72

Query:    76 ERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHG 135
              R++L H  V     I +D+S ++T+KV NRD +S++Y SL VS+GYRGR+LG VKS  G
Sbjct:    73 SRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRGRELGLVKSKGG 132

Query:   136 RVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVTGHLGLFFLEFPLEV 195
              +KA  SS+IDA L+L  ++V+ DV+YL+ DLA+G +PFDTI +V G LG+     P++ 
Sbjct:   133 HLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDLGVLLFNIPIQG 192

Query:   196 K 196
             K
Sbjct:   193 K 193

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2080320 AT3G54200 "AT3G54200" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 34/135 (25%), Positives = 66/135 (48%)

Query:    65 VFWPSEPELKIERLHLAHFHVRMKPA---ICIDISLNVTLKVHNRDVYSVNYKSLDVSVG 121
             +F P  P   I+ + +      + P    + ++++LNV L + N +    +Y S    + 
Sbjct:    76 LFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLN 135

Query:   122 YRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTITKVT 181
             YRG+ +G       R+ A  +  ++  L L   ++LS+   LL D+  G +P +T  KVT
Sbjct:   136 YRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSET-QLLSDVMAGVIPLNTFVKVT 194

Query:   182 GHLGLFFLEFPLEVK 196
             G + +  + F ++V+
Sbjct:   195 GKVTVLKI-FKIKVQ 208


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      203       191   0.00094  110 3  11 22  0.43    32
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  171 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.36u 0.11s 18.47t   Elapsed:  00:00:01
  Total cpu time:  18.36u 0.11s 18.47t   Elapsed:  00:00:01
  Start:  Thu May  9 16:09:58 2013   End:  Thu May  9 16:09:59 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.I.9668.1 hypothetical protein (180 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	203
PLN03160	219	PLN03160, PLN03160, uncharacterized protein; Provi	3e-05
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	3e-05

>gnl|CDD|215609 PLN03160, PLN03160, uncharacterized protein; Provisional

 Score = 43.2 bits (102), Expect = 3e-05
 Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 29/195 (14%)

Query: 1   MAPSKTTSPLPPATPSQPHYYTVLPPQPQDENYTILPYYYLENPRRN----WYATIAISL 56
           MA ++   PL PA               ++E    L     +  RRN         A  L
Sbjct: 1   MAETEQVRPLAPAA--------FRLRSDEEEATNHL----KKTRRRNCIKCCGCITATLL 48

Query: 57  ILLAALLY----VFWPSEPELK-----IERLHLAHFHVRMKPAICIDISLNVTLKVHNRD 107
           IL   +L     VF   +P +K     + +L L +           +I+L   + V N +
Sbjct: 49  ILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTT---LRPGTNITLIADVSVKNPN 105

Query: 108 VYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDL 167
           V S  Y +   ++ Y G  +G  ++  G+ KA  +  ++  + +   K+LS V  LL D+
Sbjct: 106 VASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS-VPGLLTDI 164

Query: 168 ARGTVPFDTITKVTG 182
           + G +  ++ T++ G
Sbjct: 165 SSGLLNMNSYTRIGG 179

Length = 219

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 8/101 (7%)

Query: 100 TLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNH-GRVKALASSFIDAELQLKCVKVLS 158
           TL+V N + + + Y  L   + Y G++L    S   G V A  ++ ++  + +     L 
Sbjct: 1   TLRVRNPNSFPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLEVPVTVS----LD 56

Query: 159 DVVYLLEDLARGTVPFDTITKV---TGHLGLFFLEFPLEVK 196
           D+  LL+DL    +      +     G         PL  +
Sbjct: 57  DLARLLKDLLAVGLELPYTLRGRLKVGGPVKGSRTVPLSKE 97

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	203
PLN03160	219	uncharacterized protein; Provisional	100.0
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	99.7
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.53
smart00769	100	WHy Water Stress and Hypersensitive response.	99.18
COG5608	161	LEA14-like dessication related protein [Defense me	98.46
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	96.82
PF14155	112	DUF4307: Domain of unknown function (DUF4307)	92.47
PF11837	106	DUF3357: Domain of unknown function (DUF3357); Int	87.68

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=1.5e-39  Score=271.40  Aligned_cols=191  Identities=17%  Similarity=0.272  Sum_probs=159.9

Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCceEeccCC-ccCCC-cchhhHHHHHHHH---HHHheeEEEecCCCeEEEEEEEEeee
Q 028822            9 PLPPATPSQPHYYTVLPPQPQDENYTILPYY-YLENP-RRNWYATIAISLI---LLAALLYVFWPSEPELKIERLHLAHF   83 (203)
Q Consensus         9 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~p~~-~r~~~-rc~~~~~~~lv~~---i~~l~~~vlrP~~P~~~v~~~~l~~~   83 (203)
                      +.-|++|+.|+..++.++..+.+   .-++. +||+| +||.|++++++++   +++++|++||||+|+|+++++++++|
T Consensus         3 ~~~~~~p~a~~~~~~~~d~~~~~---~~~~~~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~   79 (219)
T PLN03160          3 ETEQVRPLAPAAFRLRSDEEEAT---NHLKKTRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKL   79 (219)
T ss_pred             ccccCCCCCCCcccccCchhhcC---cchhccccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeee
Confidence            34489999999999888654321   00222 23333 6777766554332   45567889999999999999999999


Q ss_pred             ecCCC--CCeeEEEEEEEEEEEECCCeeEEEEcCeEEEEEECCEEEeeeeeCCceecCceeEEEEEEEEEEeeeeccchH
Q 028822           84 HVRMK--PAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNHGRVKALASSFIDAELQLKCVKVLSDVV  161 (203)
Q Consensus        84 ~~~~~--~~~~ln~tl~~~v~v~NPN~~~i~Y~~~~~~v~Y~g~~lG~~~~~~~~~~ar~t~~v~~~l~~~~~~l~~~~~  161 (203)
                      ++++.  ....+|++++++|+++|||+++|+|+++++.++|+|+.+|++.+|+|+|++|+++.+++++++.+.++.++ .
T Consensus        80 ~~~~~~~~~~~~n~tl~~~v~v~NPN~~~~~Y~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~~-~  158 (219)
T PLN03160         80 ELINNTTLRPGTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILSV-P  158 (219)
T ss_pred             eeccCCCCceeEEEEEEEEEEEECCCceeEEEcCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceeccc-h
Confidence            98752  34689999999999999999999999999999999999999999999999999999999999988888665 7


Q ss_pred             HHHHHhcCCeEEEEEEEEEEEEEEEE-EEeeeeEEEEEEEEEC
Q 028822          162 YLLEDLARGTVPFDTITKVTGHLGLF-FLEFPLEVKQEYHVRF  203 (203)
Q Consensus       162 ~l~~D~~~G~v~l~~~~~v~gkv~v~-~~k~~~~~~v~C~v~f  203 (203)
                      +|.+|+++|.++|+++++++||++++ ++|++++++++|++.+
T Consensus       159 ~L~~D~~~G~v~l~~~~~v~gkVkv~~i~k~~v~~~v~C~v~V  201 (219)
T PLN03160        159 GLLTDISSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCTMTV  201 (219)
T ss_pred             hHHHHhhCCeEEEEEEEEEEEEEEEEEEEEEEEEEEEEeEEEE
Confidence            89999999999999999999999999 7888999999999863

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=99.70  E-value=2.7e-15  Score=125.48  Aligned_cols=120  Identities=15%  Similarity=0.316  Sum_probs=103.8

Q ss_pred             CceEeccCC-ccCCC-cchhhHHHH-HHHH-HHHheeEEEecCCCeEEEEEEEEeeeecCCCCCeeEEEEEEEEEEEECC
Q 028822           31 ENYTILPYY-YLENP-RRNWYATIA-ISLI-LLAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNR  106 (203)
Q Consensus        31 ~~~~~~p~~-~r~~~-rc~~~~~~~-lv~~-i~~l~~~vlrP~~P~~~v~~~~l~~~~~~~~~~~~ln~tl~~~v~v~NP  106 (203)
                      +++|||||+ ||.++ |+++|++++ ++|+ +.+|+.|||.||...++-.+++...+.++...+ .+.+++...++++|+
T Consensus        57 qLVALIPy~DqRLKPrRTklyV~~sV~~CLl~~~L~iFFLfPRsV~v~~~gv~s~~V~f~~~~~-~v~l~itn~lNIsN~  135 (238)
T PF07092_consen   57 QLVALIPYSDQRLKPRRTKLYVFLSVLLCLLLSGLVIFFLFPRSVTVSPVGVKSVTVSFNPDKS-TVQLNITNTLNISNP  135 (238)
T ss_pred             cEEEEEeccccccCCceeEEEeeHHHHHHHHHHHheEEEEeCcEEEEecCcEEEEEEEEeCCCC-EEEEEEEEEEEccCC
Confidence            599999998 99888 568888876 5565 567788999999999999999999888886543 467777899999999


Q ss_pred             CeeEEEEcCeEEEEEECCEEEeeeeeCC-ceecCceeEEEEEEEEE
Q 028822          107 DVYSVNYKSLDVSVGYRGRKLGHVKSNH-GRVKALASSFIDAELQL  151 (203)
Q Consensus       107 N~~~i~Y~~~~~~v~Y~g~~lG~~~~~~-~~~~ar~t~~v~~~l~~  151 (203)
                      |++++...++++++.|..+.+|++.... ..+++++++++.+++..
T Consensus       136 NFy~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~t  181 (238)
T PF07092_consen  136 NFYPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVKT  181 (238)
T ss_pred             CEEEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEeeE
Confidence            9999999999999999999999998876 68999999999887654

The function of this family is unknown.

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.53  E-value=6.1e-14  Score=101.89  Aligned_cols=97  Identities=22%  Similarity=0.325  Sum_probs=76.0

Q ss_pred             EEEEECCCeeEEEEcCeEEEEEECCEEEe-eeeeCCceecCceeEEEEEEEEEEeeeeccchHHHHHHhcCCeEEEEEEE
Q 028822          100 TLKVHNRDVYSVNYKSLDVSVGYRGRKLG-HVKSNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGTVPFDTIT  178 (203)
Q Consensus       100 ~v~v~NPN~~~i~Y~~~~~~v~Y~g~~lG-~~~~~~~~~~ar~t~~v~~~l~~~~~~l~~~~~~l~~D~~~G~v~l~~~~  178 (203)
                      +|+++|||.++++|+++++.++|+|+.+| ....+++.|++++++.+.+.+.++...+   ...+.++. +|..++++..
T Consensus         1 ~l~v~NPN~~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l---~~~l~~~~-~~~~~~~v~~   76 (101)
T PF03168_consen    1 TLSVRNPNSFGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL---PRLLKDLL-AGRVPFDVTY   76 (101)
T ss_dssp             EEEEEESSSS-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH---HHHHHHHH-HTTSCEEEEE
T ss_pred             CEEEECCCceeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH---HHHHHhhh-ccccceEEEE
Confidence            58999999999999999999999999999 6678889999999999999888877655   24455566 7788888889


Q ss_pred             EEEEEEEE-E-EEeeeeEEEEEEE
Q 028822          179 KVTGHLGL-F-FLEFPLEVKQEYH  200 (203)
Q Consensus       179 ~v~gkv~v-~-~~k~~~~~~v~C~  200 (203)
                      +++|++++ + .+..+.+..++|+
T Consensus        77 ~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   77 RIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEcccceeeeEEEeEEeE
Confidence            99999995 3 3334555555554

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=99.18  E-value=3.8e-10  Score=83.05  Aligned_cols=87  Identities=17%  Similarity=0.309  Sum_probs=72.2

Q ss_pred             eEEEEEEEEEEEECCCeeEEEEcCeEEEEEECCEEEeeeeeC-CceecCceeEEEEEEEEEEeeeeccchHHHHHHhcCC
Q 028822           92 CIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSN-HGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARG  170 (203)
Q Consensus        92 ~ln~tl~~~v~v~NPN~~~i~Y~~~~~~v~Y~g~~lG~~~~~-~~~~~ar~t~~v~~~l~~~~~~l~~~~~~l~~D~~~G  170 (203)
                      .+++++.++++++|||.+++.+++++..++|+|..+|++..+ .+.+++++++.+.+++++. ..   +...+..++.+|
T Consensus        12 ~~~~~~~l~l~v~NPN~~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~-~~---~~~~~~~~l~~~   87 (100)
T smart00769       12 GLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVN-LF---LAEALIWHIANG   87 (100)
T ss_pred             ceEEEEEEEEEEECCCCCccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEee-hh---HhHHHHHhhccC
Confidence            578889999999999999999999999999999999999985 6999999999999998884 22   235678888877


Q ss_pred             eEEEEEEEEEEEEEE
Q 028822          171 TVPFDTITKVTGHLG  185 (203)
Q Consensus       171 ~v~l~~~~~v~gkv~  185 (203)
                      .   ++..+++|++.
T Consensus        88 ~---~~~y~l~g~l~   99 (100)
T smart00769       88 E---EIPYRLDGKLT   99 (100)
T ss_pred             C---CccEEEEEEEC
Confidence            6   33445666654

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=98.46  E-value=3.5e-05  Score=60.62  Aligned_cols=121  Identities=16%  Similarity=0.242  Sum_probs=87.5

Q ss_pred             HHheeEEEecCCCeEEEEEEEEeeeecCCCCCeeEEEEEEEEEEEECCCeeEEEEcCeEEEEEECCEEEeeeee-CCcee
Q 028822           59 LAALLYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKS-NHGRV  137 (203)
Q Consensus        59 ~~l~~~vlrP~~P~~~v~~~~l~~~~~~~~~~~~ln~tl~~~v~v~NPN~~~i~Y~~~~~~v~Y~g~~lG~~~~-~~~~~  137 (203)
                      +.++...+  ++|.++--.++.-.+.-       ....+-.+++++|||-+++-..+++..++-+|.++|++.. .++.+
T Consensus        23 lS~~~i~~--~~p~ve~~ka~wGkvt~-------s~~EiV~t~KiyNPN~fPipVtgl~y~vymN~Iki~eG~~~k~~~v   93 (161)
T COG5608          23 LSGCMIPV--KKPGVESMKAKWGKVTN-------SETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGEILKGTTV   93 (161)
T ss_pred             hhCCceEc--CCCCceEEEEEEEEEec-------cceEEEEEEEecCCCCcceeeeceEEEEEEcceEeeccccccceEE
Confidence            33443344  67877777776666552       3446678999999999999999999999999999999975 55999


Q ss_pred             cCceeEEEEEEEEEEeeeeccchHHHHHHhcCCeE-EEEEEEEEEEEEEEE--EEeeee
Q 028822          138 KALASSFIDAELQLKCVKVLSDVVYLLEDLARGTV-PFDTITKVTGHLGLF--FLEFPL  193 (203)
Q Consensus       138 ~ar~t~~v~~~l~~~~~~l~~~~~~l~~D~~~G~v-~l~~~~~v~gkv~v~--~~k~~~  193 (203)
                      ++++..++++++.++-.++-   ..+...+++|+- +++  .++.|.++++  .++.++
T Consensus        94 ~p~S~~tvdv~l~~d~~~~k---e~w~~hi~ngErs~Ir--~~i~~~v~vg~~d~eVpi  147 (161)
T COG5608          94 PPNSRETVDVPLRLDNSKIK---EWWVTHIENGERSTIR--VRIKGVVKVGGMDYEVPI  147 (161)
T ss_pred             CCCCeEEEEEEEEEehHHHH---HHHHHHhhccCcccEE--EEEEEEEEEccEEEEEEE
Confidence            99999999999988865551   335667888873 443  3444544444  445444

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=96.82  E-value=0.0043  Score=55.73  Aligned_cols=62  Identities=15%  Similarity=0.345  Sum_probs=40.1

Q ss_pred             eEEEecCCCeEEEEEEEEeeeecCCCCCeeEEEEEEEEEEEECCCeeEEEEcCeEEEEEECCEEEee
Q 028822           63 LYVFWPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGH  129 (203)
Q Consensus        63 ~~vlrP~~P~~~v~~~~l~~~~~~~~~~~~ln~tl~~~v~v~NPN~~~i~Y~~~~~~v~Y~g~~lG~  129 (203)
                      .|+|--..|--.|.=..+.++=.+     .-.+-|+++|++.|||.+.|..++.++.|+-+-.-+|.
T Consensus       321 gFv~AttKpL~~v~v~~I~NVlaS-----~qELmfdl~V~A~NPn~~~V~I~d~dldIFAKS~yvg~  382 (387)
T PF12751_consen  321 GFVFATTKPLTDVQVVSIQNVLAS-----EQELMFDLTVEAFNPNWFTVTIDDMDLDIFAKSRYVGT  382 (387)
T ss_pred             HhhhhcCcccccceEEEeeeeeec-----cceEEEeeEEEEECCCeEEEEeccceeeeEecCCccCc
Confidence            455544444333333333443332     23456788999999999999999999999876655553

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PF14155 DUF4307: Domain of unknown function (DUF4307)

Probab=92.47  E-value=2.2  Score=31.93  Aligned_cols=81  Identities=10%  Similarity=0.185  Sum_probs=39.4

Q ss_pred             HHHHheeEEEe-cCCCeEEEEEEEEeeeecCCCCCeeEEEEEEEEEEEECCCe-eEEEEcCeEEEEEECCEEEeeeeeCC
Q 028822           57 ILLAALLYVFW-PSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDV-YSVNYKSLDVSVGYRGRKLGHVKSNH  134 (203)
Q Consensus        57 ~i~~l~~~vlr-P~~P~~~v~~~~l~~~~~~~~~~~~ln~tl~~~v~v~NPN~-~~i~Y~~~~~~v~Y~g~~lG~~~~~~  134 (203)
                      ++++++|+-+. -..+.++   .+..+|+..+..  .++++|++  +-. |.. .-.....    ..|+|.++|.-.   
T Consensus        17 ~~~~~~w~~~~~~~~~~v~---~~~~gf~vv~d~--~v~v~f~V--tr~-~~~~a~C~VrA----~~~d~aeVGrre---   81 (112)
T PF14155_consen   17 AGAVVAWFGYSQFGSPPVS---AEVIGFEVVDDS--TVEVTFDV--TRD-PGRPAVCIVRA----LDYDGAEVGRRE---   81 (112)
T ss_pred             HHHHHhHhhhhhccCCCce---EEEEEEEECCCC--EEEEEEEE--EEC-CCCCEEEEEEE----EeCCCCEEEEEE---
Confidence            34455565553 5566653   344455555432  34554433  333 664 4443332    248889999643   


Q ss_pred             ceecCceeEEEEEEEEEE
Q 028822          135 GRVKALASSFIDAELQLK  152 (203)
Q Consensus       135 ~~~~ar~t~~v~~~l~~~  152 (203)
                      ..+|+.+...+..++++.
T Consensus        82 V~vp~~~~~~~~~~v~v~   99 (112)
T PF14155_consen   82 VLVPPSGERTVRVTVTVR   99 (112)
T ss_pred             EEECCCCCcEEEEEEEEE
Confidence            233443333444444443

>PF11837 DUF3357: Domain of unknown function (DUF3357); InterPro: IPR021792 This entry represents the N-terminal domain of beta-fructofuranosidase, whcih is involved in the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides

Probab=87.68  E-value=0.16  Score=37.73  Aligned_cols=35  Identities=14%  Similarity=-0.021  Sum_probs=0.0

Q ss_pred             CCCCccCCCCCCCCceEeccCCccCCCcchhhHHHHH
Q 028822           18 PHYYTVLPPQPQDENYTILPYYYLENPRRNWYATIAI   54 (203)
Q Consensus        18 ~~~y~~~~~~~~~~~~~~~p~~~r~~~rc~~~~~~~l   54 (203)
                      |.-|+|.|.++.++--.  +.++||..+|++.+++.+
T Consensus         4 p~sY~PLP~~~~~~~~~--~~~~rR~~k~~~~i~~s~   38 (106)
T PF11837_consen    4 PYSYTPLPDSSESAPGP--GGRRRRPLKCLAAIFSSL   38 (106)
T ss_dssp             -------------------------------------
T ss_pred             CCccCCCCCCCcccCCC--CcCcCCcchhHHHHHHHH
Confidence            33499999764331000  122334346766655543

; GO: 0004564 beta-fructofuranosidase activity, 0004575 sucrose alpha-glucosidase activity; PDB: 3UGG_A 3UGH_B 3UGF_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	203
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.94
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.81
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.47

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.94  E-value=2.3e-09  Score=85.55  Aligned_cols=103  Identities=12%  Similarity=0.224  Sum_probs=82.7

Q ss_pred             CCCeEEEEEEEEeeeecCCCCCeeEEEEEEEEEEEECCCeeEEEEcCeEEEEEECCEEEeeeeeCC-ceecCceeEEEEE
Q 028822           69 SEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNH-GRVKALASSFIDA  147 (203)
Q Consensus        69 ~~P~~~v~~~~l~~~~~~~~~~~~ln~tl~~~v~v~NPN~~~i~Y~~~~~~v~Y~g~~lG~~~~~~-~~~~ar~t~~v~~  147 (203)
                      +.|+++++++++.+++..       .++|.+.++|+|||.+.+.+.+++..+.-+|..++++.++. +.+++++++.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l~-------~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~V  115 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD-------GVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDV  115 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS-------SEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc-------eEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEE
Confidence            799999999999988854       25677899999999999999999999999999999998876 9999999999999


Q ss_pred             EEEEEeeeeccchHHHHHHhcCC-eEEEEEEEEEEEEEEE
Q 028822          148 ELQLKCVKVLSDVVYLLEDLARG-TVPFDTITKVTGHLGL  186 (203)
Q Consensus       148 ~l~~~~~~l~~~~~~l~~D~~~G-~v~l~~~~~v~gkv~v  186 (203)
                      .+++.-..+    ..+++|+.++ .++.+    ++|++.+
T Consensus       116 pv~v~~~~l----~~~~~~l~~~~~i~Y~----L~g~L~i  147 (174)
T 1yyc_A          116 PVKVAYSIA----VSLMKDMCTDWDIDYQ----LDIGLTF  147 (174)
T ss_dssp             EEEESHHHH----HHTCCCCCSSEEECEE----EEEEEEE
T ss_pred             EEEEEHHHH----HHHHHhcCCCCccceE----EEEEEEe
Confidence            888774332    4455666444 35554    4555443

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.81  E-value=1.6e-09  Score=84.64  Aligned_cols=103  Identities=17%  Similarity=0.238  Sum_probs=81.7

Q ss_pred             CCCeEEEEEEEEeeeecCCCCCeeEEEEEEEEEEEECCCeeEEEEcCeEEEEEECCEEEeeeeeCC-ceecCceeEEEEE
Q 028822           69 SEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNH-GRVKALASSFIDA  147 (203)
Q Consensus        69 ~~P~~~v~~~~l~~~~~~~~~~~~ln~tl~~~v~v~NPN~~~i~Y~~~~~~v~Y~g~~lG~~~~~~-~~~~ar~t~~v~~  147 (203)
                      +.|+++++++++.+++..       .++|.+.++|+|||.+++.+.+++..+.-+|..++++.++. +.+++++++.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~~-------~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~v   92 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRD-------SVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CSCCCBCSEEEECCCTTT-------EECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred             CCCEEEEEEeEEeccCcc-------eeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEE
Confidence            689999999999877643       45678899999999999999999999999999999998765 9999999999998


Q ss_pred             EEEEEeeeeccchHHHHHHhc-CCeEEEEEEEEEEEEEEE
Q 028822          148 ELQLKCVKVLSDVVYLLEDLA-RGTVPFDTITKVTGHLGL  186 (203)
Q Consensus       148 ~l~~~~~~l~~~~~~l~~D~~-~G~v~l~~~~~v~gkv~v  186 (203)
                      .++++-..    ..++.+|+. ++.++.+    ++|++.+
T Consensus        93 pv~v~~~~----l~~~~~~l~~~~~i~Y~----l~g~l~i  124 (151)
T 1xo8_A           93 PVVVPYSI----LFNLARDVGVDWDIDYE----LQIGLTI  124 (151)
T ss_dssp             CCCEEHHH----HHHHHHHHHHHSEEEEE----EEEEEEE
T ss_pred             EEEEEHHH----HHHHHHhcccCCcccEE----EEEEEEE
Confidence            88777433    345556653 3556664    4555543

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.47  E-value=4.4e-06  Score=63.91  Aligned_cols=75  Identities=17%  Similarity=0.238  Sum_probs=62.3

Q ss_pred             EEEEEEEEEEECCCeeEEEEcCeEEEEEECCEEEeeee-eCCceecCceeEEEEEEEEEEeeeeccchHHHHHHhcCCe
Q 028822           94 DISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVK-SNHGRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARGT  171 (203)
Q Consensus        94 n~tl~~~v~v~NPN~~~i~Y~~~~~~v~Y~g~~lG~~~-~~~~~~~ar~t~~v~~~l~~~~~~l~~~~~~l~~D~~~G~  171 (203)
                      ...|.+.+++.|||.+.+.+++++..++.+|..+|++. ...+.+++++++.+.+++.++-.++..   .+.+.+.+|.
T Consensus        17 ~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~---~~~~hi~nge   92 (136)
T 3but_A           17 QTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE---WWVTHIANGE   92 (136)
T ss_dssp             EEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT---HHHHHHHTTS
T ss_pred             EEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH---HHHHHhhcCC
Confidence            35578899999999999999999999999999999997 456999999999999998888666533   3555555663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	203
d1xo8a_	151	b.1.25.1 (A:) Putative dessication related protein	8e-06

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 151

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.7 bits (98), Expect = 8e-06
 Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 14/135 (10%)

Query: 70  EPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGH 129
           +PE  +  + L   +          +     + V N   +S+    +  +    GR++G 
Sbjct: 21  KPEGSVTDVDLKDVNRD-------SVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGK 73

Query: 130 VKSNH-GRVKALASSFIDAELQLKCVKVLSDVVYLLEDLARG-TVPFDTITKVTGHLGLF 187
            K    G +KA   + +D  + +      S +  L  D+     + ++    +T  L + 
Sbjct: 74  GKIPDPGSLKAKDMTALDIPVVVP----YSILFNLARDVGVDWDIDYELQIGLTIDLPVV 129

Query: 188 F-LEFPLEVKQEYHV 201
                P+  K E  +
Sbjct: 130 GEFTIPISSKGEIKL 144

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	203
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.89

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.89  E-value=4.5e-10  Score=85.88  Aligned_cols=105  Identities=16%  Similarity=0.199  Sum_probs=83.1

Q ss_pred             ecCCCeEEEEEEEEeeeecCCCCCeeEEEEEEEEEEEECCCeeEEEEcCeEEEEEECCEEEeeeeeCC-ceecCceeEEE
Q 028822           67 WPSEPELKIERLHLAHFHVRMKPAICIDISLNVTLKVHNRDVYSVNYKSLDVSVGYRGRKLGHVKSNH-GRVKALASSFI  145 (203)
Q Consensus        67 rP~~P~~~v~~~~l~~~~~~~~~~~~ln~tl~~~v~v~NPN~~~i~Y~~~~~~v~Y~g~~lG~~~~~~-~~~~ar~t~~v  145 (203)
                      +-+.|++++.++++.+++..       .+++.++++++|||.+++..++++..++.+|..+|++..+. +.+++++++.+
T Consensus        18 ~~~kPev~l~~v~i~~v~~~-------~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v   90 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRD-------SVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTAL   90 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTT-------EECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEE
T ss_pred             CCCCCeEEEEEEEeeecccc-------eEEEEEEEEEECCCCCceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEE
Confidence            44689999999999888854       35677899999999999999999999999999999998665 89999999999


Q ss_pred             EEEEEEEeeeeccchHHHHHHhcC-CeEEEEEEEEEEEEEEE
Q 028822          146 DAELQLKCVKVLSDVVYLLEDLAR-GTVPFDTITKVTGHLGL  186 (203)
Q Consensus       146 ~~~l~~~~~~l~~~~~~l~~D~~~-G~v~l~~~~~v~gkv~v  186 (203)
                      .+++++.-.    +...+++|+.+ +.++.    +++|++++
T Consensus        91 ~vpv~v~~~----~l~~~~~~i~~~~~i~Y----~l~g~l~~  124 (151)
T d1xo8a_          91 DIPVVVPYS----ILFNLARDVGVDWDIDY----ELQIGLTI  124 (151)
T ss_dssp             EECCCEEHH----HHHHHHHHHHHHSEEEE----EEEEEEEE
T ss_pred             EEEEEEEHH----HHHHHHHhhccCCCccE----EEEEEEEE
Confidence            988776533    33556667644 44544    56666664