Citrus Sinensis ID: 028932

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-
Protein Sequence
MASNPTATQLTAAPAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYCDIDL
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHEEEcccccEEEEEEEEEEEcccccccEEEEEEEEEEEEccccEEEEEEEcEEEEEEEccEEEEEccccccccccccEEEEEEEEEEEEEcccHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEEcEEEEEEEEcEEEEcccccccEEEcccEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccccccEEEEEEEEEEEccccEEEEEEEEEEEEEEEccEEEEccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEccEEEEEEEEEEEccccccccccccccEEcc
Coil and Loop (DISEMBL)
masnptatqltaapakrtGLVRCIAIVLLALIVLAGIVVLIIWLVvkpkrpvytiedgsvhdfnvnnnhlnstFGFVIrahnpngrasiyyDSIEvsvayddqnvafstlvpfhqptrnvtRLDAKILAQNVAISSSIAKdlklektsGEIELAVRVKAKIRFRVgawksnhrtlrvvcdpvmlhfsssksfqrtycdidl
Flexible Loop (DISEMBL)
masnptatqltaapakrtGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQNVAIsssiakdlklektsgeielavrvkakirfrvgawksnhrtlrvvcdpvmlhfsssksfqrtycdidl
Low Complexity Region (SEG)
MASNPTATQLTAAPAKRTGLVRCiaivllalivlagivvliiwlvvKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYCDIDL
Disordered region (IsUnstruct)
****************RTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYC****
Disordered Region (DISOPRED)
********************VRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVML**********TYCDIDL
Disordered Region (DISEMBL)
***********AAPAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYCDIDL
Disordered Region (DISPRO)
****************RTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVMLHFSSSKSF***YC****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASNPTATQLTAAPAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYCDIDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	201	2.2.26 [Sep-21-2011]
Q8VZ13	221	Uncharacterized protein A	no	no	0.935	0.850	0.385	7e-34
O48915	219	Protein NDR1 OS=Arabidops	no	no	0.706	0.648	0.222	5e-06

>sp|Q8VZ13|Y1816_ARATH Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1

 Score =  143 bits (361), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 123/192 (64%), Gaps = 4/192 (2%)

Query: 14  PAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNNN--HLN 71
           P +R   V CI + L+ L +L G+ +LI +L ++PKR +YT+E  SV +F + NN  H+N
Sbjct: 30  PGRRMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHIN 89

Query: 72  STFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQN 131
           + F +VI+++NP    S+ Y S+ +S A+ +Q+VA   + PF Q  +N TR++ ++++ N
Sbjct: 90  AKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHN 149

Query: 132 VAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVMLHFSSSK- 190
           VA+S   A+DL+ EK+ G IE+ V + A++ ++   ++S  RTL+ VC PVM++ +SS  
Sbjct: 150 VALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSL 209

Query: 191 -SFQRTYCDIDL 201
             FQR  C   L
Sbjct: 210 DGFQRVLCKTRL 221

Arabidopsis thaliana (taxid: 3702)

>sp|O48915|NDR1_ARATH Protein NDR1 OS=Arabidopsis thaliana GN=NDR1 PE=1 SV=1

 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 38/180 (21%)

Query: 22  RCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVN-NNHLNSTFGFVIRA 80
           R      L+ I  AG+  L +WL ++  +P  +I++  +     + N+  N+T  F++R 
Sbjct: 12  RNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRC 71

Query: 81  HNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLD--AKILAQNVAISSSI 138
            NPN    IYYD + ++         FST+        N T+++  A +L  N  +    
Sbjct: 72  DNPNKDKGIYYDDVHLN---------FSTI--------NTTKINSSALVLVGNYTVPKFY 114

Query: 139 AKDLKLEKTSGEIE------------------LAVRVKAKIRFRVGAWKSNHRTLRVVCD 180
               K  K  G+++                    + +K ++RF++  WK+    + V  D
Sbjct: 115 QGHKKKAKKWGQVKPLNNQTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGAD 174

Involved in disease resistance. Required for resistance conferred by multiple R genes recognizing different bacterial and oomycete pathogen isolates like avirulent P.syringae or H.parasitica (downy mildew). Required for the establishment of hypersensitive response (HR) and systemic acquired resistance (SAR) after infection with the bacterial pathogen P.syringae DC3000 carrying avrRpt2. Required for resistance to the soilborne fungus V.longisporum. Interaction with RIN4 is required for the activation of the R gene RPS2 and RPS2-mediated resistance.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
224104737	199	predicted protein [Populus trichocarpa]	0.900	0.909	0.585	4e-59
356554941	203	PREDICTED: uncharacterized protein At1g0	1.0	0.990	0.527	4e-58
356546690	203	PREDICTED: uncharacterized protein At1g0	1.0	0.990	0.546	4e-55
255565497	203	conserved hypothetical protein [Ricinus	0.980	0.970	0.555	4e-55
225436430	199	PREDICTED: protein NDR1-like [Vitis vini	0.786	0.793	0.610	3e-52
297734887	265	unnamed protein product [Vitis vinifera]	0.786	0.596	0.610	3e-52
147777409	199	hypothetical protein VITISV_001444 [Viti	0.786	0.793	0.610	5e-52
357446295	202	hypothetical protein MTR_2g011350 [Medic	0.965	0.960	0.525	7e-52
449530347	197	PREDICTED: uncharacterized protein At1g0	0.915	0.934	0.475	5e-50
297812431	208	hypothetical protein ARALYDRAFT_910289 [	0.945	0.913	0.471	2e-47

>gi|224104737|ref|XP_002313548.1| predicted protein [Populus trichocarpa] gi|222849956|gb|EEE87503.1| predicted protein [Populus trichocarpa]

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 106/181 (58%), Positives = 142/181 (78%)

Query: 20  LVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIR 79
           LVR I +V+LALIVL G+ VLI WL++KPK+ VY I+  SVH+FN+ NNHLN+TF  +I+
Sbjct: 18  LVRIIVVVILALIVLLGLAVLITWLIIKPKQLVYRIDSASVHNFNLKNNHLNATFDLLIK 77

Query: 80  AHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIA 139
           AHNPN R S+YYD IEVSVAYD Q +AF+TL PFHQP RNVTRLDA ++A++ A+S +++
Sbjct: 78  AHNPNSRISVYYDPIEVSVAYDGQTIAFNTLEPFHQPRRNVTRLDATLVARDAALSGALS 137

Query: 140 KDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYCDI 199
           +DL+++K SG I L VR+KA+IRF+VG +K  H TLR+ C PV +  SS K+F+   CD+
Sbjct: 138 RDLRVQKRSGNIGLDVRIKARIRFKVGIFKLKHHTLRISCSPVKVQMSSLKNFETASCDL 197

Query: 200 D 200
           D
Sbjct: 198 D 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554941|ref|XP_003545799.1| PREDICTED: uncharacterized protein At1g08160-like [Glycine max]

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 107/203 (52%), Positives = 153/203 (75%), Gaps = 2/203 (0%)

Query: 1   MASNPTATQLTAA-PAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGS 59
           MA  P+ +  TAA   KR+ L+  IA+ ++ALI+L GI V+IIWLV+KPKR  Y++E+ +
Sbjct: 1   MAHPPSQSNSTAANKPKRSNLLHYIAMFIVALIILVGIAVIIIWLVLKPKRLEYSVENAA 60

Query: 60  VHDFNVNN-NHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTR 118
           +H+FN+ + NHL + F F IR++NPN R SIYYD++EVSV Y+DQ +A + + PF Q  +
Sbjct: 61  IHNFNLTDANHLYANFDFTIRSYNPNSRISIYYDTVEVSVRYEDQTLATNAVQPFFQSHK 120

Query: 119 NVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVV 178
           NVTRL   + AQ+VA+  S+ KDL+LE++SG+IEL V V+A+IRF+VGAWKS HR LR+ 
Sbjct: 121 NVTRLHVALTAQSVALYESVPKDLRLERSSGDIELDVWVRARIRFKVGAWKSRHRVLRIF 180

Query: 179 CDPVMLHFSSSKSFQRTYCDIDL 201
           C PV++HFS  KSF+R  C+++L
Sbjct: 181 CSPVLVHFSKGKSFERAPCEVEL 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546690|ref|XP_003541756.1| PREDICTED: uncharacterized protein At1g08160-like [Glycine max]

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 111/203 (54%), Positives = 153/203 (75%), Gaps = 2/203 (0%)

Query: 1   MASNPTATQLTAA-PAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGS 59
           MA  PT +Q  AA   KR+ L+RCIAI +LALI+L GI V+IIWLV+KPKR  YT+E+ +
Sbjct: 1   MAHPPTQSQSRAANKPKRSNLLRCIAIFILALIILVGIAVIIIWLVLKPKRLEYTVENAA 60

Query: 60  VHDFNVNN-NHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTR 118
           +H+FN+ + NHL + F F IR++NPN R SIYYD++EVSV Y+DQ +A + + PF Q  +
Sbjct: 61  IHNFNLTDANHLYANFDFTIRSYNPNSRVSIYYDTVEVSVRYEDQTLATNAVQPFFQSHK 120

Query: 119 NVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVV 178
           NVTRL   + AQ VA+  S+ KDL+LE++SG+IEL V ++A+IRF+VG WKS HR L++ 
Sbjct: 121 NVTRLHVGLTAQTVALYDSVPKDLRLERSSGDIELDVWMRARIRFKVGVWKSKHRVLKIF 180

Query: 179 CDPVMLHFSSSKSFQRTYCDIDL 201
           C PV++HFS  KSF+R  CD++L
Sbjct: 181 CSPVLVHFSKGKSFERAPCDVEL 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565497|ref|XP_002523739.1| conserved hypothetical protein [Ricinus communis] gi|223537043|gb|EEF38679.1| conserved hypothetical protein [Ricinus communis]

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 111/200 (55%), Positives = 156/200 (78%), Gaps = 3/200 (1%)

Query: 3   SNPTATQLTAAPAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHD 62
           S  T TQ    PA  + L R IA+++L LIV+ G+VVLI WL+++PK   Y+IE+GSVH+
Sbjct: 4   STATTTQQPPRPA-HSKLFRVIAVLILTLIVIVGLVVLITWLIIRPKSMEYSIENGSVHN 62

Query: 63  FNVNNNHLN--STFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNV 120
            N+N+N+ +  ++F FVIRA+NPN R SIYYD I+VS++YDDQ +AF+TL PFHQP RNV
Sbjct: 63  LNLNSNNNHLNASFDFVIRAYNPNTRISIYYDYIDVSLSYDDQTLAFNTLEPFHQPRRNV 122

Query: 121 TRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCD 180
           TRL+AKI A++ A+S +++KD+++EK SG+++L +R+KA+IRF+VG  K  HR L V+C 
Sbjct: 123 TRLEAKIEARDAALSQALSKDMRIEKASGQLQLDLRLKARIRFKVGVMKFKHRHLSVICP 182

Query: 181 PVMLHFSSSKSFQRTYCDID 200
            VM+HFSSSK  QR+YCDI+
Sbjct: 183 AVMVHFSSSKIAQRSYCDIE 202

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436430|ref|XP_002273852.1| PREDICTED: protein NDR1-like [Vitis vinifera]

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 97/159 (61%), Positives = 128/159 (80%), Gaps = 1/159 (0%)

Query: 43  WLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDD 102
           WLVVKPK   Y IEDGS+H F ++NNHLN+TF FV+RA+NPN + SIYYDS+EVSV+YDD
Sbjct: 42  WLVVKPKGLAYDIEDGSIHGFGLSNNHLNATFHFVLRAYNPNRKVSIYYDSMEVSVSYDD 101

Query: 103 QNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIR 162
           Q +A + + PF Q  RNVTRL+ +++AQ++ +S  ++KDL L+++SG++EL VRVKA+IR
Sbjct: 102 QTMASNGVQPFFQRHRNVTRLEVQLVAQSLLLSGPVSKDLHLDRSSGKVELEVRVKARIR 161

Query: 163 FRVGAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYCDIDL 201
           F+VG WKS HRTLRV C P  +HFSS K F+RT C+IDL
Sbjct: 162 FKVGIWKSKHRTLRVFCLP-EVHFSSHKDFERTKCEIDL 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734887|emb|CBI17121.3| unnamed protein product [Vitis vinifera]

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 97/159 (61%), Positives = 128/159 (80%), Gaps = 1/159 (0%)

Query: 43  WLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDD 102
           WLVVKPK   Y IEDGS+H F ++NNHLN+TF FV+RA+NPN + SIYYDS+EVSV+YDD
Sbjct: 108 WLVVKPKGLAYDIEDGSIHGFGLSNNHLNATFHFVLRAYNPNRKVSIYYDSMEVSVSYDD 167

Query: 103 QNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIR 162
           Q +A + + PF Q  RNVTRL+ +++AQ++ +S  ++KDL L+++SG++EL VRVKA+IR
Sbjct: 168 QTMASNGVQPFFQRHRNVTRLEVQLVAQSLLLSGPVSKDLHLDRSSGKVELEVRVKARIR 227

Query: 163 FRVGAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYCDIDL 201
           F+VG WKS HRTLRV C P  +HFSS K F+RT C+IDL
Sbjct: 228 FKVGIWKSKHRTLRVFCLP-EVHFSSHKDFERTKCEIDL 265

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147777409|emb|CAN64947.1| hypothetical protein VITISV_001444 [Vitis vinifera]

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 97/159 (61%), Positives = 127/159 (79%), Gaps = 1/159 (0%)

Query: 43  WLVVKPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDD 102
           WLVVKPK   Y IEDGS+H F ++NNHLN+TF FV+RA+NPN + SIYYDS+EVSV YDD
Sbjct: 42  WLVVKPKGLAYDIEDGSIHGFGLSNNHLNATFHFVLRAYNPNRKVSIYYDSMEVSVXYDD 101

Query: 103 QNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIR 162
           Q +A + + PF Q  RNVTRL+ +++AQ++ +S  ++KDL L+++SG++EL VRVKA+IR
Sbjct: 102 QTMASNGVQPFFQRHRNVTRLEVQLVAQSLLLSGPVSKDLHLDRSSGKVELEVRVKARIR 161

Query: 163 FRVGAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYCDIDL 201
           F+VG WKS HRTLRV C P  +HFSS K F+RT C+IDL
Sbjct: 162 FKVGIWKSKHRTLRVFCLP-EVHFSSHKDFERTKCEIDL 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446295|ref|XP_003593425.1| hypothetical protein MTR_2g011350 [Medicago truncatula] gi|355482473|gb|AES63676.1| hypothetical protein MTR_2g011350 [Medicago truncatula] gi|388518813|gb|AFK47468.1| unknown [Medicago truncatula]

 Score =  209 bits (531), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 105/200 (52%), Positives = 151/200 (75%), Gaps = 6/200 (3%)

Query: 3   SNPTATQLTAAPAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHD 62
           SNP AT+      K + L+R IAI++LALI++ G+ VLI WLVV+PK   Y++ED S+H+
Sbjct: 8   SNPQATK-----PKSSMLLRYIAIIILALIIIVGLAVLISWLVVRPKNLQYSVEDASIHN 62

Query: 63  FNVNN-NHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVT 121
           FN+ + NHL + F F IR+ NPN + S+YYDSIEVSV Y+DQ +A + + PF QP +NVT
Sbjct: 63  FNLTDANHLYANFDFTIRSKNPNSKVSLYYDSIEVSVRYEDQTLATNAVQPFFQPHKNVT 122

Query: 122 RLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDP 181
           R+ A++ AQ VA+  S+ KDLKLE++SG+I L V ++A+IRF+VG  K+ HRTLR+ C P
Sbjct: 123 RMHARLTAQTVALYDSVPKDLKLERSSGDIALDVFIRARIRFKVGLLKTRHRTLRISCSP 182

Query: 182 VMLHFSSSKSFQRTYCDIDL 201
           V+++FS +KSF+R YCD+++
Sbjct: 183 VLVNFSKAKSFERAYCDVEM 202

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530347|ref|XP_004172157.1| PREDICTED: uncharacterized protein At1g08160-like [Cucumis sativus]

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 89/187 (47%), Positives = 136/187 (72%), Gaps = 3/187 (1%)

Query: 14  PAKRTG---LVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNNNHL 70
           P  R+G   ++R + I L+ALI+L G+ VLIIWL V+PKR  YT+E   VH+F++ +  L
Sbjct: 7   PLSRSGPSRILRFVIIFLVALIILVGLAVLIIWLTVRPKRLSYTVESAEVHNFDMTDTQL 66

Query: 71  NSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQ 130
           N++F F +RA+NPN R S+YYDSI  +V + DQ+++F  L PF+QP +N   L+  + AQ
Sbjct: 67  NASFSFGVRAYNPNKRVSVYYDSITATVGFGDQDLSFGVLSPFYQPHKNEQWLNIHLNAQ 126

Query: 131 NVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVMLHFSSSK 190
           N  +  S++K+L LE+++GE++L + +KA+IRF+VG WKS HRTLR+ C PV+++ S SK
Sbjct: 127 NFLLHDSVSKELALERSAGEMDLDLWIKARIRFKVGVWKSAHRTLRIRCSPVIVYLSKSK 186

Query: 191 SFQRTYC 197
           +F++T C
Sbjct: 187 TFKKTTC 193

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812431|ref|XP_002874099.1| hypothetical protein ARALYDRAFT_910289 [Arabidopsis lyrata subsp. lyrata] gi|297319936|gb|EFH50358.1| hypothetical protein ARALYDRAFT_910289 [Arabidopsis lyrata subsp. lyrata]

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 90/191 (47%), Positives = 129/191 (67%), Gaps = 1/191 (0%)

Query: 12  AAPAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNV-NNNHL 70
           A P +R  LV  + +V+L LI +A +  LI WLV KPK+  YT+E  SV +FN+ N+NH+
Sbjct: 18  AQPLRRPSLVCYVFLVILTLIFIAAVGFLITWLVTKPKKLHYTVESASVRNFNLTNDNHM 77

Query: 71  NSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQ 130
           ++TF F I++HNPN R S+YY S+E+ V + DQ +AF T+ PFHQP  NV ++D  ++AQ
Sbjct: 78  SATFKFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTMEPFHQPRMNVKQIDETLVAQ 137

Query: 131 NVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCDPVMLHFSSSK 190
           NVA S S  KDL+ + + G+IE  V VKA++RF+VG WKS+HRT ++ C  V +  S   
Sbjct: 138 NVAFSKSNGKDLRSQTSLGKIEFEVFVKARVRFKVGIWKSSHRTAKIECSHVTVSLSQPN 197

Query: 191 SFQRTYCDIDL 201
             Q + CD D+
Sbjct: 198 QSQNSSCDADI 208

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
TAIR|locus:2172681	207	AT5G22870 "AT5G22870" [Arabido	0.771	0.748	0.467	3.4e-38
TAIR|locus:2205180	221	AT1G08160 "AT1G08160" [Arabido	0.955	0.868	0.346	1.4e-30
TAIR|locus:2098363	240	NHL2 "AT3G11650" [Arabidopsis	0.761	0.637	0.310	3.3e-15
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.771	0.596	0.251	4.2e-15
TAIR|locus:2164305	231	NHL3 "AT5G06320" [Arabidopsis	0.756	0.658	0.314	1.1e-14
TAIR|locus:2098368	209	NHL1 "AT3G11660" [Arabidopsis	0.701	0.674	0.280	1.4e-14
TAIR|locus:2195783	224	AT1G61760 "AT1G61760" [Arabido	0.661	0.593	0.291	3e-14
TAIR|locus:2095685	206	AT3G44220 "AT3G44220" [Arabido	0.696	0.679	0.275	3e-14
TAIR|locus:2164092	213	AT5G53730 "AT5G53730" [Arabido	0.656	0.619	0.264	3.8e-14
TAIR|locus:2039185	227	YLS9 "AT2G35980" [Arabidopsis	0.741	0.656	0.276	1e-13

TAIR|locus:2172681 AT5G22870 "AT5G22870" [Arabidopsis thaliana (taxid:3702)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 73/156 (46%), Positives = 109/156 (69%)

Query:    47 KPKRPVYTIEDGSVHDFNV-NNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNV 105
             KPK+  YT+E+ SV +FN+ N+NH+++TF F I++HNPN R S+YY S+E+ V + DQ +
Sbjct:    52 KPKKLRYTVENASVQNFNLTNDNHMSATFQFTIQSHNPNHRISVYYSSVEIFVKFKDQTL 111

Query:   106 AFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRV 165
             AF T+ PFHQP  NV ++D  ++A+NVA+S S  KDL+ + + G+I   V VKA++RF+V
Sbjct:   112 AFDTVEPFHQPRMNVKQIDETLIAENVAVSKSNGKDLRSQNSLGKIGFEVFVKARVRFKV 171

Query:   166 GAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYCDIDL 201
             G WKS+HRT ++ C  V +  S     Q + CD D+
Sbjct:   172 GIWKSSHRTAKIKCSHVTVSLSQPNKSQNSSCDADI 207

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2205180 AT1G08160 "AT1G08160" [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 69/199 (34%), Positives = 111/199 (55%)

Query:     3 SNPTATQLTAAPAKRTGLVRCXXXXXXXXXXXXXXXXXXXXXXXKPKRPVYTIEDGSVHD 62
             S P A  L   P +R   V C                       +PKR +YT+E  SV +
Sbjct:    22 SQPRAQPL---PGRRMNPVLCIIVALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQE 78

Query:    63 FNVNNN--HLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNV 120
             F + NN  H+N+ F +VI+++NP    S+ Y S+ +S A+ +Q+VA   + PF Q  +N 
Sbjct:    79 FAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNE 138

Query:   121 TRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVCD 180
             TR++ ++++ NVA+S   A+DL+ EK+ G IE+ V + A++ ++   ++S  RTL+ VC 
Sbjct:   139 TRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCT 198

Query:   181 PVMLHFSSSK--SFQRTYC 197
             PVM++ +SS    FQR  C
Sbjct:   199 PVMINVTSSSLDGFQRVLC 217

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2098363 NHL2 "AT3G11650" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 51/164 (31%), Positives = 80/164 (48%)

Query:    47 KPKRPVYTIEDGSVH--DFNVNNN-HLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQ 103
             +P    + + D +++   F+ NNN H +    F IR  NPN R  +YYD   VS  Y DQ
Sbjct:    78 RPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIR--NPNQRVGVYYDEFSVSGYYGDQ 135

Query:   104 NVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAK-DLKLEKTSGEIELAVRVKAKIR 162
                 + +  F+Q  +N T +  KI  QN+ +    A+ DLK ++ SG   +  +++  +R
Sbjct:   136 RFGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIYRINAKLRLSVR 195

Query:   163 FRVGAWKSNHRTLRVVCDPVMLHFSSSKS-----FQRTYCDIDL 201
             F+    KS     ++ CD + +   SS S     FQ   CD DL
Sbjct:   196 FKFWFIKSWKLKPKIKCDDLKIPLGSSNSTGGFKFQPVQCDFDL 239

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0051607 "defense response to virus" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 40/159 (25%), Positives = 84/159 (52%)

Query:    47 KPKRPVYTIEDGSVHDFNVNNNH-LNSTFGFVIRAHNPNGRASIYYDS-IEVSVAYDDQN 104
             +P+ P Y+IE  SV   N+N+   ++ +F   +R+ N NG+  +YY+    V V Y+D +
Sbjct:   101 RPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVD 160

Query:   105 VAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFR 164
             ++   +  F+QP +NVT +   +    + ++S + K+++ E +   +   +++KA ++ +
Sbjct:   161 ISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIK 220

Query:   165 VGAWKSNHRTLRVVCDPVMLHFSSSKSFQRTYC--DIDL 201
              G+ K+    + V CD  +   ++        C  D+DL
Sbjct:   221 FGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDVDL 259

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2164305 NHL3 "AT5G06320" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 51/162 (31%), Positives = 77/162 (47%)

Query:    47 KPKRPVYTIEDGSVHDFNV---NNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQ 103
             +P    + + D  + +F +   NN   N    F IR  NPN R  +YYD IEV   Y DQ
Sbjct:    71 RPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIR--NPNRRIGVYYDEIEVRGYYGDQ 128

Query:   104 NVAFSTLVP-FHQPTRNVTRLDAKILAQN-VAISSSIAKDLKLEKTSGEIELAVRVKAKI 161
                 S  +  F+Q  +N T +  K++ Q  V +     KDL  +  S    +  +++ KI
Sbjct:   129 RFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKI 188

Query:   162 RFRVGAWKSNHRTLRVVCD---PVMLHFSSSKSFQRTYCDID 200
             RF+ G  KS     ++ CD   P+  + +S   FQ T CD+D
Sbjct:   189 RFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFVFQPTKCDVD 230

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009617 "response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0051607 "defense response to virus" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2098368 NHL1 "AT3G11660" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 41/146 (28%), Positives = 75/146 (51%)

Query:    47 KPKRPVYTIEDGSVHDFNVNNNH---LNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQ 103
             +P +P + ++D +V+ FNV+ N    L S F   + + NPN +  IYYD ++V   Y  Q
Sbjct:    41 QPSKPRFILQDATVYAFNVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQ 100

Query:   104 NVAFSTLVP-FHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIR 162
              + F T +P  +Q  ++V      +   +V I+      L  +K +G + L +R   ++R
Sbjct:   101 QITFPTSIPPTYQGHKDVDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVR 160

Query:   163 FRVGAWKSNHRTLRVVCDPVMLHFSS 188
             ++VG + +    L V C P  ++F +
Sbjct:   161 WKVGTFITGKYHLHVKC-PAYINFGN 185

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0051607 "defense response to virus" evidence=IEP

TAIR|locus:2195783 AT1G61760 "AT1G61760" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 39/134 (29%), Positives = 68/134 (50%)

Query:    47 KPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVA 106
             +P RP   I   S+   +  +    S   F I AHNPN    IYYDS+E SV Y ++ + 
Sbjct:    67 QPHRPRVHIRGFSISGLSRPDGFETSHISFKITAHNPNQNVGIYYDSMEGSVYYKEKRIG 126

Query:   107 FSTLV-PFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRV 165
              + L  PF+Q  +N + +D  +    +A++     +++ ++  G+I   ++V++ IRF+V
Sbjct:   127 STKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWMEMERDRNQGKIMFRLKVRSMIRFKV 186

Query:   166 GAWKSNHRTLRVVC 179
               W S    +   C
Sbjct:   187 YTWHSKSHKMYASC 200

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2095685 AT3G44220 "AT3G44220" [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 40/145 (27%), Positives = 75/145 (51%)

Query:    48 PKRPVYTIEDGSVHDFNVNN-NHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVA 106
             P  P + ++D +++ FNV+  N+L S     + + NPN +  I+YD +++  +Y +Q V 
Sbjct:    44 PHGPRFVLQDATIYAFNVSQPNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVT 103

Query:   107 FSTLVPF-HQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRV 165
              +TL+P  +Q   +VT     +    V ++   +  L  + T+G + L +++   +R++V
Sbjct:   104 LATLLPATYQGHLDVTIWSPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKV 163

Query:   166 GAWKSNHRTLRVVCDPVML---HFS 187
             G W S    L V C   +    HFS
Sbjct:   164 GTWVSGRYRLHVNCPAYITLAGHFS 188

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2164092 AT5G53730 "AT5G53730" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 36/136 (26%), Positives = 73/136 (53%)

Query:    48 PKRPVYTIEDGSVHDFNV--NNNHL-NSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQN 104
             P+RP +++ +  ++  N+  ++ HL NS+    + + NPN +  IYYD + V  AY  Q 
Sbjct:    51 PERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDKLLVYAAYRGQQ 110

Query:   105 VAF-STLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRF 163
             +   ++L PF+Q    +  L A +    + ++ S    +  E+++G+I + +++  K+R+
Sbjct:   111 ITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKIIIGMKMDGKLRW 170

Query:   164 RVGAWKSNHRTLRVVC 179
             ++G W S      V C
Sbjct:   171 KIGTWVSGAYRFNVNC 186

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2039185 YLS9 "AT2G35980" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 42/152 (27%), Positives = 73/152 (48%)

Query:    47 KPKRPVYTIEDGSVHDFNVNN--NHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQN 104
             +P+   + + D S+  F+  +  N L       +   NPN R  +YYD IE    Y+ + 
Sbjct:    64 RPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKR 123

Query:   105 VAFSTLVPFHQPTRNVTRLDAKILAQNVAI-SSSIAKDLKLEKTSGEIELAVRVKAKIRF 163
              +  TL PF+Q  +N T L      QN+ I ++  ++ L  E+ SG   + ++ + ++RF
Sbjct:   124 FSTITLTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRF 183

Query:   164 RVGAWKSNHRTLRVVCDPVMLHFSSSKSFQRT 195
             ++G  K      +V CD + L  S+S     T
Sbjct:   184 KLGDLKFRRIKPKVDCDDLRLPLSTSNGTTTT 215

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0051707 "response to other organism" evidence=TAS

GO:0009507 "chloroplast" evidence=IDA

GO:0010150 "leaf senescence" evidence=IMP

GO:0051607 "defense response to virus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	201
pfam03168	98	pfam03168, LEA_2, Late embryogenesis abundant prot	1e-07

>gnl|CDD|217400 pfam03168, LEA_2, Late embryogenesis abundant protein

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 19/103 (18%), Positives = 37/103 (35%), Gaps = 7/103 (6%)

Query: 78  IRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLV-PFHQPTRNVTRLDAKILAQNVAISS 136
           +R  NPN    + YD +   ++Y+ Q +A  T   P   P    T L+  +      ++ 
Sbjct: 2   LRVRNPN-SFPLPYDGLSYDLSYNGQELASGTSPQPGTVPAGGTTTLEVPVTVSLDDLAR 60

Query: 137 SIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKSNHRTLRVVC 179
            +   L +       EL   ++ +++       S    L    
Sbjct: 61  LLKDLLAVGL-----ELPYTLRGRLKVGGPVKGSRTVPLSKEG 98

Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511, pfam07427, has now been merged into this family. Length = 98

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	201
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.53
smart00769	100	WHy Water Stress and Hypersensitive response.	98.72
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	98.65
COG5608	161	LEA14-like dessication related protein [Defense me	97.72
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.12
PLN03160	219	uncharacterized protein; Provisional	95.22
PF14155	112	DUF4307: Domain of unknown function (DUF4307)	89.32
COG4698	197	Uncharacterized protein conserved in bacteria [Fun	80.63
PRK05529	255	cell division protein FtsQ; Provisional	80.44

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=1.3e-37  Score=249.85  Aligned_cols=181  Identities=19%  Similarity=0.316  Sum_probs=153.6

Q ss_pred             CCCcchhhHHHHHHHHHHHHHHheeeeEEEEeCCCCEEEEeeeEEeeeecCC-----CceeEEEEEEEEEeCCCCeeeEE
Q 028932           16 KRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNVNN-----NHLNSTFGFVIRAHNPNGRASIY   90 (201)
Q Consensus        16 ~~~~~~~~~~~~~~~l~~l~~i~~~i~~lv~rP~~P~~~v~~~~v~~~~~~~-----~~l~~~~~~~l~v~NPN~~~~i~   90 (201)
                      ||+++.+|+++++.+++++++++++++|++||||+|+|+|+++++++|++++     ..+|++++++++++|||. .+++
T Consensus        32 ~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~~  110 (219)
T PLN03160         32 RRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASFK  110 (219)
T ss_pred             ccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeEE
Confidence            4445555555555555566777778889999999999999999999999853     357888889999999996 9999


Q ss_pred             EeceEEEEEECCeEEeeeeeeceeecCCceeEEEEEEEEeeeecChHHHHHHHhhhccceEEEEEEEEEEEEEEEeeEEe
Q 028932           91 YDSIEVSVAYDDQNVAFSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAVRVKAKIRFRVGAWKS  170 (201)
Q Consensus        91 y~~~~~~v~Y~g~~lg~~~vp~f~q~~~~t~~v~~~l~~~~~~l~~~~~~~l~~d~~~g~v~~~v~v~~~v~~kvg~~~~  170 (201)
                      |++++++++|+|+.+|++.+|+|+|++++|+.+++++...+..+.++  .+|.+|..+|.++|+++++++++.++|.+.+
T Consensus       111 Y~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~~--~~L~~D~~~G~v~l~~~~~v~gkVkv~~i~k  188 (219)
T PLN03160        111 YSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILSV--PGLLTDISSGLLNMNSYTRIGGKVKILKIIK  188 (219)
T ss_pred             EcCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceeccc--hhHHHHhhCCeEEEEEEEEEEEEEEEEEEEE
Confidence            99999999999999999999999999999999999977665544332  5799999999999999999998889998888


Q ss_pred             cceeEEEEcCeEEEccCCCCceeccceeeeC
Q 028932          171 NHRTLRVVCDPVMLHFSSSKSFQRTYCDIDL  201 (201)
Q Consensus       171 ~~~~~~v~C~~v~v~~~~~~~~~~~~C~v~~  201 (201)
                      +++.++++|+ +.+++++. .+++++|+.++
T Consensus       189 ~~v~~~v~C~-v~V~~~~~-~i~~~~C~~~~  217 (219)
T PLN03160        189 KHVVVKMNCT-MTVNITSQ-AIQGQKCKRHV  217 (219)
T ss_pred             EEEEEEEEeE-EEEECCCC-EEeccEecccc
Confidence            9999999999 99999876 77899999763

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.53  E-value=6.7e-14  Score=98.66  Aligned_cols=98  Identities=29%  Similarity=0.429  Sum_probs=73.8

Q ss_pred             EEEEeCCCCeeeEEEeceEEEEEECCeEEe-eeeeeceeecCCceeEEEEEEEEeeeecChHHHHHHHhhhccceEEEEE
Q 028932           77 VIRAHNPNGRASIYYDSIEVSVAYDDQNVA-FSTLVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLKLEKTSGEIELAV  155 (201)
Q Consensus        77 ~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg-~~~vp~f~q~~~~t~~v~~~l~~~~~~l~~~~~~~l~~d~~~g~v~~~v  155 (201)
                      +|+++|||. ++++|++++++++|+|+.+| ....++|.|++++++.+.+.+..+...+    ...+.++. +|..++++
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l----~~~l~~~~-~~~~~~~v   74 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL----PRLLKDLL-AGRVPFDV   74 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH----HHHHHHHH-HTTSCEEE
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH----HHHHHhhh-ccccceEE
Confidence            589999997 99999999999999999999 6789999999999999999888776544    34556666 66677777


Q ss_pred             EEEEEEEEEE-eeEEecceeEEEEcC
Q 028932          156 RVKAKIRFRV-GAWKSNHRTLRVVCD  180 (201)
Q Consensus       156 ~v~~~v~~kv-g~~~~~~~~~~v~C~  180 (201)
                      .+++++++++ +.....+..+.++|+
T Consensus        75 ~~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   75 TYRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEEEcccceeeeEEEeEEeE
Confidence            7788888884 333234455555554

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.72  E-value=2.5e-07  Score=65.44  Aligned_cols=62  Identities=15%  Similarity=0.195  Sum_probs=56.4

Q ss_pred             CceeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEeeeeee-ceeecCCceeEEEEEEEEe
Q 028932           68 NHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLV-PFHQPTRNVTRLDAKILAQ  130 (201)
Q Consensus        68 ~~l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~t~~v~~~l~~~  130 (201)
                      +..+.++.+.+.+.|||. +.+.|++++.+++|+|..+|++..+ ++..++++++.+.+.+...
T Consensus        11 ~~~~~~~~l~l~v~NPN~-~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~   73 (100)
T smart00769       11 SGLEIEIVLKVKVQNPNP-FPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVN   73 (100)
T ss_pred             cceEEEEEEEEEEECCCC-CccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEee
Confidence            347899999999999995 9999999999999999999999885 7999999999999888773

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=98.65  E-value=6.1e-06  Score=66.55  Aligned_cols=112  Identities=12%  Similarity=0.150  Sum_probs=74.1

Q ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHheeeeEEEEeCCCCEEEEeeeEEeeeec--CCCceeEEEEEEEEEeCCCCeeeEE
Q 028932           13 APAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSVHDFNV--NNNHLNSTFGFVIRAHNPNGRASIY   90 (201)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~l~~l~~i~~~i~~lv~rP~~P~~~v~~~~v~~~~~--~~~~l~~~~~~~l~v~NPN~~~~i~   90 (201)
                      +|-|+++-..+.++++++-+++.|+++++    +-||...++-.++......+  .++.+..++.-++.++||| ++.+.
T Consensus        67 qRLKPrRTklyV~~sV~~CLl~~~L~iFF----LfPRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~N-Fy~V~  141 (238)
T PF07092_consen   67 QRLKPRRTKLYVFLSVLLCLLLSGLVIFF----LFPRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNPN-FYPVT  141 (238)
T ss_pred             cccCCceeEEEeeHHHHHHHHHHHheEEE----EeCcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCCC-EEEEE
Confidence            56666553444433433333444444322    33876666655544443333  4567889999999999999 89999


Q ss_pred             EeceEEEEEECCeEEeeeeeec-eeecCCceeEEEEEEEE
Q 028932           91 YDSIEVSVAYDDQNVAFSTLVP-FHQPTRNVTRLDAKILA  129 (201)
Q Consensus        91 y~~~~~~v~Y~g~~lg~~~vp~-f~q~~~~t~~v~~~l~~  129 (201)
                      ..++++++.|....+|.+.... -..++++.+.+..++..
T Consensus       142 Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~t  181 (238)
T PF07092_consen  142 VTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVKT  181 (238)
T ss_pred             EEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEeeE
Confidence            9999999999999999886543 35677776666655443

The function of this family is unknown.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.72  E-value=0.0033  Score=47.32  Aligned_cols=110  Identities=18%  Similarity=0.180  Sum_probs=77.2

Q ss_pred             CCCEEEEeeeEEeeeecCCCceeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEeeee-eeceeecCCceeEEEEEE
Q 028932           49 KRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFST-LVPFHQPTRNVTRLDAKI  127 (201)
Q Consensus        49 ~~P~~~v~~~~v~~~~~~~~~l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~-vp~f~q~~~~t~~v~~~l  127 (201)
                      ++|.+.--.+..-..+-    ....+-.++.++|||. +.+-..+++.++|-+|.++|.+. ..++..++++..++++.+
T Consensus        31 ~~p~ve~~ka~wGkvt~----s~~EiV~t~KiyNPN~-fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~l  105 (161)
T COG5608          31 KKPGVESMKAKWGKVTN----SETEIVGTLKIYNPNP-FPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVPL  105 (161)
T ss_pred             CCCCceEEEEEEEEEec----cceEEEEEEEecCCCC-cceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEEEE
Confidence            45766655555555432    4568888999999995 99999999999999999999985 467999999999999998


Q ss_pred             EEeeeecChHHHHHHHhhhccceE-EEEEEEEEEEEEEEeeEE
Q 028932          128 LAQNVAISSSIAKDLKLEKTSGEI-ELAVRVKAKIRFRVGAWK  169 (201)
Q Consensus       128 ~~~~~~l~~~~~~~l~~d~~~g~v-~~~v~v~~~v~~kvg~~~  169 (201)
                      ..+...+.+.    +.....+|.- .++++++  ..+++|...
T Consensus       106 ~~d~~~~ke~----w~~hi~ngErs~Ir~~i~--~~v~vg~~d  142 (161)
T COG5608         106 RLDNSKIKEW----WVTHIENGERSTIRVRIK--GVVKVGGMD  142 (161)
T ss_pred             EEehHHHHHH----HHHHhhccCcccEEEEEE--EEEEEccEE
Confidence            8876554443    3333344432 3443333  344555443

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.12  E-value=0.0023  Score=55.06  Aligned_cols=38  Identities=18%  Similarity=0.373  Sum_probs=30.8

Q ss_pred             CceeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEe
Q 028932           68 NHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVA  106 (201)
Q Consensus        68 ~~l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg  106 (201)
                      +.-..-|++++.+.||| .+.+..++.+++|+-+..-+|
T Consensus       344 S~qELmfdl~V~A~NPn-~~~V~I~d~dldIFAKS~yvg  381 (387)
T PF12751_consen  344 SEQELMFDLTVEAFNPN-WFTVTIDDMDLDIFAKSRYVG  381 (387)
T ss_pred             ccceEEEeeEEEEECCC-eEEEEeccceeeeEecCCccC
Confidence            34567899999999999 599999999999986554433

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PLN03160 uncharacterized protein; Provisional

Probab=95.22  E-value=0.29  Score=39.43  Aligned_cols=102  Identities=19%  Similarity=0.194  Sum_probs=60.1

Q ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHheeeeEEEEeCC--CCEEEEeeeEEee-------eecC---C-CceeEEEEEEEE
Q 028932           13 APAKRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPK--RPVYTIEDGSVHD-------FNVN---N-NHLNSTFGFVIR   79 (201)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~l~~l~~i~~~i~~lv~rP~--~P~~~v~~~~v~~-------~~~~---~-~~l~~~~~~~l~   79 (201)
                      +|++..+|++|++++++++++++++++++++=-=.|+  --.++++++.+..       +|++   + ..-|.|. +.+.
T Consensus        32 ~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~~  110 (219)
T PLN03160         32 RRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASFK  110 (219)
T ss_pred             ccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeEE
Confidence            6999999999999988888888888888776556664  3456666655431       2221   0 1123344 3444


Q ss_pred             EeCCCCeeeEEEeceEEEEEECCeEEeeeeeeceeecCCcee
Q 028932           80 AHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVPFHQPTRNVT  121 (201)
Q Consensus        80 v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~vp~f~q~~~~t~  121 (201)
                      ..|  ....++|++..+.-    ..+..+..+++.+...+.+
T Consensus       111 Y~~--~~~~v~Y~g~~vG~----a~~p~g~~~ar~T~~l~~t  146 (219)
T PLN03160        111 YSN--TTTTIYYGGTVVGE----ARTPPGKAKARRTMRMNVT  146 (219)
T ss_pred             EcC--eEEEEEECCEEEEE----EEcCCcccCCCCeEEEEEE
Confidence            443  35889998755433    2334444444444444433

>PF14155 DUF4307: Domain of unknown function (DUF4307)

Probab=89.32  E-value=6.3  Score=28.25  Aligned_cols=29  Identities=17%  Similarity=0.323  Sum_probs=16.4

Q ss_pred             EECCeEEeee--eeeceeecCCceeEEEEEEEEe
Q 028932           99 AYDDQNVAFS--TLVPFHQPTRNVTRLDAKILAQ  130 (201)
Q Consensus        99 ~Y~g~~lg~~--~vp~f~q~~~~t~~v~~~l~~~  130 (201)
                      -|++.++|.-  .+|+   ++..+..+.+.+...
T Consensus        71 ~~d~aeVGrreV~vp~---~~~~~~~~~v~v~Tt  101 (112)
T PF14155_consen   71 DYDGAEVGRREVLVPP---SGERTVRVTVTVRTT  101 (112)
T ss_pred             eCCCCEEEEEEEEECC---CCCcEEEEEEEEEec
Confidence            4678888865  4555   333445555555443

>COG4698 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=80.63  E-value=1.5  Score=34.09  Aligned_cols=43  Identities=30%  Similarity=0.402  Sum_probs=27.8

Q ss_pred             CCCcchhhHHHHHHHHHHHHHHheeeeEEEEeCCCCEEEEeeeEE
Q 028932           16 KRTGLVRCIAIVLLALIVLAGIVVLIIWLVVKPKRPVYTIEDGSV   60 (201)
Q Consensus        16 ~~~~~~~~~~~~~~~l~~l~~i~~~i~~lv~rP~~P~~~v~~~~v   60 (201)
                      ...++++|+|.+++.+.++++  +++..+++.|+.|...+.+.+-
T Consensus         6 ~~~n~WKw~f~iLLAln~l~~--~~i~~~vlsp~ee~t~~~~a~~   48 (197)
T COG4698           6 GTLNYWKWLFFILLALNTLLA--VLIALFVLSPREEPTHLEDASE   48 (197)
T ss_pred             ccccHHHHHHHHHHHHHHHHH--HHhheeeccCCCCCchhhccCc
Confidence            334577787777766655544  4455567899997766666543

>PRK05529 cell division protein FtsQ; Provisional

Probab=80.44  E-value=2.7  Score=34.68  Aligned_cols=43  Identities=7%  Similarity=0.088  Sum_probs=28.5

Q ss_pred             CCEEEEeeeEEeeeec-C-------------CC--------------ceeEEEEEEEEEeCCCCeeeEEEec
Q 028932           50 RPVYTIEDGSVHDFNV-N-------------NN--------------HLNSTFGFVIRAHNPNGRASIYYDS   93 (201)
Q Consensus        50 ~P~~~v~~~~v~~~~~-~-------------~~--------------~l~~~~~~~l~v~NPN~~~~i~y~~   93 (201)
                      .|.|.|..+.+++-+. +             .+              .+-.-=+++++-+.||. +.++..+
T Consensus        58 Sp~~~v~~I~V~Gn~~vs~~eI~~~~~~~~g~~l~~vd~~~~~~~l~~~P~V~sa~V~r~~P~t-l~I~V~E  128 (255)
T PRK05529         58 SPLLALRSIEVAGNMRVKPQDIVAALRDQFGKPLPLVDPETVRKKLAAFPLIRSYSVESKPPGT-IVVRVVE  128 (255)
T ss_pred             CCceEEEEEEEECCccCCHHHHHHHhcccCCCcceeECHHHHHHHHhcCCCEeEEEEEEeCCCE-EEEEEEE
Confidence            4899999999987443 1             01              12234466778889994 8888753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	201
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.47
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.45
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.33

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.47  E-value=1.4e-06  Score=66.65  Aligned_cols=99  Identities=18%  Similarity=0.166  Sum_probs=78.1

Q ss_pred             CCCEEEEeeeEEeeeecCCCceeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEeeeeee-ceeecCCceeEEEEEE
Q 028932           49 KRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLV-PFHQPTRNVTRLDAKI  127 (201)
Q Consensus        49 ~~P~~~v~~~~v~~~~~~~~~l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~t~~v~~~l  127 (201)
                      +.|++++.++++.+++.    ..++|.+.++++|||. ..+.+..++.++.-+|.+++++..+ ++..++++++.+.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l----~~~~~~l~LrV~NPN~-~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vpv  117 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTR----DGVDYHAKVSVKNPYS-QSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPV  117 (174)
T ss_dssp             CCCEEEEEEEEEEEECS----SSEEEEEEEEEEECSS-SCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEEE
T ss_pred             CCCEEEEEEeEEecccc----ceEEEEEEEEEECCCC-CCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEEEE
Confidence            56999999999998876    5588999999999995 9999999999999999999999875 5889999999999888


Q ss_pred             EEeeeecChHHHHHHHhhh-ccceEEEEEEE
Q 028932          128 LAQNVAISSSIAKDLKLEK-TSGEIELAVRV  157 (201)
Q Consensus       128 ~~~~~~l~~~~~~~l~~d~-~~g~v~~~v~v  157 (201)
                      +....    + ..++..+. ..+.++.++++
T Consensus       118 ~v~~~----~-l~~~~~~l~~~~~i~Y~L~g  143 (174)
T 1yyc_A          118 KVAYS----I-AVSLMKDMCTDWDIDYQLDI  143 (174)
T ss_dssp             EESHH----H-HHHTCCCCCSSEEECEEEEE
T ss_pred             EEEHH----H-HHHHHHhcCCCCccceEEEE
Confidence            77532    1 22233344 33446665543

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.45  E-value=4.3e-07  Score=68.03  Aligned_cols=101  Identities=15%  Similarity=0.208  Sum_probs=77.8

Q ss_pred             CCCEEEEeeeEEeeeecCCCceeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEeeeeee-ceeecCCceeEEEEEE
Q 028932           49 KRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLV-PFHQPTRNVTRLDAKI  127 (201)
Q Consensus        49 ~~P~~~v~~~~v~~~~~~~~~l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~t~~v~~~l  127 (201)
                      +.|++++.++++.+++.    ..++|.+.++++|||. ..+.+.+++.+++-+|.+++++..+ ++..++++++.+.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~----~~~~~~~~l~V~NPN~-~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vpv   94 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR----DSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPV   94 (151)
T ss_dssp             CSCCCBCSEEEECCCTT----TEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECC
T ss_pred             CCCEEEEEEeEEeccCc----ceeEEEEEEEEECCCC-CCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEEE
Confidence            56999999999887765    5678999999999995 9999999999999999999999775 5889999999998887


Q ss_pred             EEeeeecChHHHHHHHhhh-ccceEEEEEEEEE
Q 028932          128 LAQNVAISSSIAKDLKLEK-TSGEIELAVRVKA  159 (201)
Q Consensus       128 ~~~~~~l~~~~~~~l~~d~-~~g~v~~~v~v~~  159 (201)
                      +.....+     .++..+. ..+.++.+++.+.
T Consensus        95 ~v~~~~l-----~~~~~~l~~~~~i~Y~l~g~l  122 (151)
T 1xo8_A           95 VVPYSIL-----FNLARDVGVDWDIDYELQIGL  122 (151)
T ss_dssp             CEEHHHH-----HHHHHHHHHHSEEEEEEEEEE
T ss_pred             EEEHHHH-----HHHHHhcccCCcccEEEEEEE
Confidence            7663222     2222232 3456777664443

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.33  E-value=1.1e-05  Score=59.31  Aligned_cols=73  Identities=11%  Similarity=0.081  Sum_probs=63.0

Q ss_pred             eeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEeeee-eeceeecCCceeEEEEEEEEeeeecChHHHHHHH
Q 028932           70 LNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFST-LVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLK  143 (201)
Q Consensus        70 l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~-vp~f~q~~~~t~~v~~~l~~~~~~l~~~~~~~l~  143 (201)
                      -.+.+.+.+.+.|||. ..+.++.++.+++.+|.++|++. ...+..++.+++.+.+.+..+...+.+...+.++
T Consensus        16 ~~t~~~~~l~V~NPN~-~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~~~~~hi~   89 (136)
T 3but_A           16 SQTEIVALAKVRNEDV-VPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLREWWVTHIA   89 (136)
T ss_dssp             SEEEEEEEEEEECCSS-SCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTTHHHHHHH
T ss_pred             cEEEEEEEEEEeCCCC-cceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHHHHHHHhh
Confidence            4578999999999995 99999999999999999999986 5789999999999999999987777666555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	201
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.52

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.52  E-value=1.6e-07  Score=68.61  Aligned_cols=79  Identities=16%  Similarity=0.207  Sum_probs=69.0

Q ss_pred             eCCCCEEEEeeeEEeeeecCCCceeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEeeeeee-ceeecCCceeEEEE
Q 028932           47 KPKRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLV-PFHQPTRNVTRLDA  125 (201)
Q Consensus        47 rP~~P~~~v~~~~v~~~~~~~~~l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~t~~v~~  125 (201)
                      +-+.|++++.++++.+++.    ..+++.++++++|||. ..+..+.++.+++.+|..++++..+ ++..++++++.+.+
T Consensus        18 ~~~kPev~l~~v~i~~v~~----~~~~l~~~l~V~NPN~-~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v~v   92 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNR----DSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTT----TEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred             CCCCCeEEEEEEEeeeccc----ceEEEEEEEEEECCCC-CceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEEEE
Confidence            3457999999999988876    6788999999999995 9999999999999999999999765 57889999999988


Q ss_pred             EEEEe
Q 028932          126 KILAQ  130 (201)
Q Consensus       126 ~l~~~  130 (201)
                      .++..
T Consensus        93 pv~v~   97 (151)
T d1xo8a_          93 PVVVP   97 (151)
T ss_dssp             CCCEE
T ss_pred             EEEEE
Confidence            87765