Citrus Sinensis ID: 028978

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-
Protein Sequence
MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSLLISVYDIFLINCM
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcEEccHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLpsallsaslspsslslstlsshfndydfryslvdiplISIIRSAVIICVYglcdgprrsrgpylgiTTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSLLISVYDIFLINCM
Flexible Loop (DISEMBL)
mgffskeeKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSLLISVYDIFLINCM
Low Complexity Region (SEG)
MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADtllpsallsaslspsslslstlssHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSLLISVYDIFLINCM
Disordered region (IsUnstruct)
**********KIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSAS*******LSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSLLISVYDIFLINC*
Disordered Region (DISOPRED)
***********IILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVF***************MALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSLLISVYD*FLINC*
Disordered Region (DISEMBL)
********KSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSLLISVYDIFLINCM
Disordered Region (DISPRO)
*******EKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSLLISVYDIFLINCM
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYKIDIEAVSLLISVYDIFLINCM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
356539961	205	PREDICTED: uncharacterized protein LOC10	0.975	0.956	0.736	5e-70
357461197	216	hypothetical protein MTR_3g070400 [Medic	0.935	0.870	0.738	1e-69
449463028	207	PREDICTED: uncharacterized protein LOC10	0.925	0.898	0.761	5e-68
224101137	206	predicted protein [Populus trichocarpa]	0.925	0.902	0.796	3e-64
255587900	253	hydrolase, putative [Ricinus communis] g	0.925	0.735	0.751	3e-62
225448408	201	PREDICTED: uncharacterized protein LOC10	0.905	0.905	0.748	4e-62
359486412	197	PREDICTED: uncharacterized protein LOC10	0.900	0.918	0.741	3e-61
30688139	209	Alpha/beta hydrolase related protein [Ar	0.930	0.894	0.651	3e-60
356551462	200	PREDICTED: uncharacterized protein LOC10	0.925	0.93	0.659	3e-60
297823919	208	hypothetical protein ARALYDRAFT_483049 [	0.930	0.899	0.631	6e-59

>gi|356539961|ref|XP_003538461.1| PREDICTED: uncharacterized protein LOC100795655 [Glycine max]

 Score =  269 bits (687), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 145/197 (73%), Positives = 167/197 (84%), Gaps = 1/197 (0%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKEEKSK ILR  KTLFFLITM++SLLLFSAPVLL IAD L+PSALLS+    SS 
Sbjct: 1   MGFSSKEEKSKRILRGLKTLFFLITMVISLLLFSAPVLLVIADALVPSALLSSLSQ-SSF 59

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
           S+ TL+SHF++YDFRYSL+DIPL+SIIRS +I CVY LCDGPR S GPYLGITT+CSVLS
Sbjct: 60  SMETLASHFHNYDFRYSLIDIPLVSIIRSFIIFCVYSLCDGPRLSHGPYLGITTMCSVLS 119

Query: 121 LIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYK 180
           L+FVS KA Y+FSV+ IDR  YVRA E+ALF+CS ALAVGH+VVAYRTSCRER+KLLVYK
Sbjct: 120 LMFVSFKAVYIFSVSGIDRSGYVRATEIALFVCSCALAVGHVVVAYRTSCRERRKLLVYK 179

Query: 181 IDIEAVSLLISVYDIFL 197
           IDIEA+S   + Y  +L
Sbjct: 180 IDIEAISACKNGYPRYL 196

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461197|ref|XP_003600880.1| hypothetical protein MTR_3g070400 [Medicago truncatula] gi|355489928|gb|AES71131.1| hypothetical protein MTR_3g070400 [Medicago truncatula]

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/195 (73%), Positives = 163/195 (83%), Gaps = 7/195 (3%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKEEKSK ILR  KTLFFLITM++SLLLFSAPVLL IAD LLPSALLS +LSP SL
Sbjct: 14  MGFSSKEEKSKRILRVVKTLFFLITMILSLLLFSAPVLLVIADALLPSALLS-TLSPVSL 72

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPR--RSRGPYLGITTICSV 118
           SL+TLSSHF++YDFRYSL+DIPL+SIIRS +I CVY LCDGPR  RSRGPYL ITT+CSV
Sbjct: 73  SLTTLSSHFHNYDFRYSLIDIPLVSIIRSFIIFCVYSLCDGPRLSRSRGPYLCITTMCSV 132

Query: 119 LSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLV 178
           LSL+FVS KA YVF     +   YV   E+ALF+CS ALAVGH+VVAYRTSCRER+KLLV
Sbjct: 133 LSLLFVSFKAVYVFG----NGSGYVGGSEIALFVCSCALAVGHVVVAYRTSCRERRKLLV 188

Query: 179 YKIDIEAVSLLISVY 193
           YKIDIE++S   + Y
Sbjct: 189 YKIDIESISACTNGY 203

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463028|ref|XP_004149236.1| PREDICTED: uncharacterized protein LOC101213138 isoform 1 [Cucumis sativus] gi|449463030|ref|XP_004149237.1| PREDICTED: uncharacterized protein LOC101213138 isoform 2 [Cucumis sativus] gi|449520685|ref|XP_004167364.1| PREDICTED: uncharacterized LOC101213138 isoform 1 [Cucumis sativus] gi|449520687|ref|XP_004167365.1| PREDICTED: uncharacterized LOC101213138 isoform 2 [Cucumis sativus]

 Score =  262 bits (670), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 144/189 (76%), Positives = 162/189 (85%), Gaps = 3/189 (1%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKEEKSK + R  KTLFFLITML+SLLLFSAPVLL +AD LLPSALLSASL P S 
Sbjct: 1   MGF-SKEEKSKRLWRGIKTLFFLITMLISLLLFSAPVLLVLADALLPSALLSASLYPYSF 59

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
           SL +L S+ ++YDFR SLVDIPLIS IRSA+IICVY  CDGPR S GPYLGITT CSV+S
Sbjct: 60  SLKSLPSYLSNYDFRSSLVDIPLISFIRSAIIICVYSFCDGPRLSHGPYLGITTFCSVIS 119

Query: 121 LIFVSLKASYVF--SVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLV 178
           L+FVSLKAS+VF   + D+ RG YVR+ME+ALF+CSLALAVGH+ VAYRTSCRER+KLLV
Sbjct: 120 LVFVSLKASFVFGDGLRDVGRGGYVRSMEVALFMCSLALAVGHVAVAYRTSCRERRKLLV 179

Query: 179 YKIDIEAVS 187
           YKIDIEAVS
Sbjct: 180 YKIDIEAVS 188

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101137|ref|XP_002312157.1| predicted protein [Populus trichocarpa] gi|222851977|gb|EEE89524.1| predicted protein [Populus trichocarpa]

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/187 (79%), Positives = 165/187 (88%), Gaps = 1/187 (0%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF +KEEKS+ ++R  KTLFFLITML+S LLFSAP+LL IADTLLP +LLSASLSPSSL
Sbjct: 1   MGF-AKEEKSRRVVRGVKTLFFLITMLISFLLFSAPILLVIADTLLPFSLLSASLSPSSL 59

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
           S  TLSS FN+YDFRYSLVDIPLISIIRSAVIICVY LCDGPR SRGPYLGITT+CSV S
Sbjct: 60  SSETLSSLFNNYDFRYSLVDIPLISIIRSAVIICVYSLCDGPRLSRGPYLGITTMCSVSS 119

Query: 121 LIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYK 180
           LI+VS KA  VF V+ +DRG +V AME+ALFICSL LA+GHI VAYRTSCRER+KLLVYK
Sbjct: 120 LIYVSFKAPRVFRVSSMDRGEHVIAMEIALFICSLLLAIGHIAVAYRTSCRERRKLLVYK 179

Query: 181 IDIEAVS 187
           IDIEAVS
Sbjct: 180 IDIEAVS 186

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587900|ref|XP_002534435.1| hydrolase, putative [Ricinus communis] gi|223525303|gb|EEF27950.1| hydrolase, putative [Ricinus communis]

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/193 (75%), Positives = 162/193 (83%), Gaps = 7/193 (3%)

Query: 1   MGFFSKEEKSKI-ILRAFKTLFFLITMLVSLLLFSAPVLLAIADT-LLPSALLSASLSPS 58
           MGF +KE +S I +LR  KTLFFLIT+L+S L+FSAPVLL +ADT L  S L ++    S
Sbjct: 1   MGF-AKEVQSIIRLLRFLKTLFFLITLLISFLVFSAPVLLVLADTLLPFSLLSASLSPSS 59

Query: 59  SLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSV 118
           SLSL TLSSHFN+YDFRYSL+DIPLISIIRSAVIICVY LCDGPR SRGPYLGITTICSV
Sbjct: 60  SLSLKTLSSHFNNYDFRYSLIDIPLISIIRSAVIICVYSLCDGPRLSRGPYLGITTICSV 119

Query: 119 LSLIFVSLKASYVFSVA----DIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERK 174
            SLI+VSLKA YVFSV+    D D+G YVRAME+ALF CS  LA+GHIVVAYRTSCRER+
Sbjct: 120 SSLIYVSLKAPYVFSVSRIEEDHDKGEYVRAMEIALFACSFVLAIGHIVVAYRTSCRERR 179

Query: 175 KLLVYKIDIEAVS 187
           KLLVYKIDIEAVS
Sbjct: 180 KLLVYKIDIEAVS 192

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448408|ref|XP_002273406.1| PREDICTED: uncharacterized protein LOC100257064 isoform 1 [Vitis vinifera] gi|297736619|emb|CBI25490.3| unnamed protein product [Vitis vinifera]

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 140/187 (74%), Positives = 161/187 (86%), Gaps = 5/187 (2%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKE+KS+ +LR FKTLFFLITM+VS LLFSAPVL+ IADTLLP AL+SASLSPSSL
Sbjct: 1   MGF-SKEDKSRRVLRGFKTLFFLITMVVSFLLFSAPVLVVIADTLLPCALISASLSPSSL 59

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
           SL TL S+ ++YDFRYS++D+PL SI+RSAVI+CVY  CDGPR SRGPYLGITT+CSV S
Sbjct: 60  SLETLYSNLSNYDFRYSIIDVPLTSIVRSAVILCVYSFCDGPRLSRGPYLGITTMCSVSS 119

Query: 121 LIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYK 180
           L+FVSLKASYVFS +  D+G    A+E ALFICS+ LAV HI VAYR SCRER+KLLVYK
Sbjct: 120 LVFVSLKASYVFSGSSTDQG----AIEAALFICSVVLAVAHIFVAYRISCRERRKLLVYK 175

Query: 181 IDIEAVS 187
           IDIEAVS
Sbjct: 176 IDIEAVS 182

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486412|ref|XP_003633440.1| PREDICTED: uncharacterized protein LOC100257064 isoform 2 [Vitis vinifera]

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 138/186 (74%), Positives = 160/186 (86%), Gaps = 5/186 (2%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKE+KS+ +LR FKTLFFLITM+VS LLFSAPVL+ IADTLLP AL+SASLSPSSL
Sbjct: 1   MGF-SKEDKSRRVLRGFKTLFFLITMVVSFLLFSAPVLVVIADTLLPCALISASLSPSSL 59

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
           SL TL S+ ++YDFRYS++D+PL SI+RSAVI+CVY  CDGPR SRGPYLGITT+CSV S
Sbjct: 60  SLETLYSNLSNYDFRYSIIDVPLTSIVRSAVILCVYSFCDGPRLSRGPYLGITTMCSVSS 119

Query: 121 LIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTSCRERKKLLVYK 180
           L+FVSLKASYVFS +  D+G    A+E ALFICS+ LAV HI VAYR SCRER+KLLVYK
Sbjct: 120 LVFVSLKASYVFSGSSTDQG----AIEAALFICSVVLAVAHIFVAYRISCRERRKLLVYK 175

Query: 181 IDIEAV 186
           IDIEA+
Sbjct: 176 IDIEAM 181

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30688139|ref|NP_850325.1| Alpha/beta hydrolase related protein [Arabidopsis thaliana] gi|26449647|dbj|BAC41948.1| unknown protein [Arabidopsis thaliana] gi|30017255|gb|AAP12861.1| At2g40095 [Arabidopsis thaliana] gi|330254683|gb|AEC09777.1| Alpha/beta hydrolase related protein [Arabidopsis thaliana]

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/201 (65%), Positives = 150/201 (74%), Gaps = 14/201 (6%)

Query: 1   MGFFSKEEKSKI------ILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSAS 54
           MGF SKEE SK       + R  KT+F L TM  S LL SAP+ LA+AD LLPSALL   
Sbjct: 1   MGF-SKEEISKTRKLWSSLWRGIKTIFVLFTMFFSFLLVSAPIFLAVADALLPSALLHRF 59

Query: 55  LSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITT 114
            SP+     TLSSH  +YDFR+SL+DIPLISIIRSAVI+CVYGLCDGP+ SRGPYL IT 
Sbjct: 60  SSPA-----TLSSHLTNYDFRHSLIDIPLISIIRSAVILCVYGLCDGPKLSRGPYLTITM 114

Query: 115 ICSVLSLIFVSLKASYVFSVADIDR--GVYVRAMEMALFICSLALAVGHIVVAYRTSCRE 172
           ICS+ SLI+VSLKA++VF    I    G Y RA E+ALF+CS  LA+GHIVVAYRTSCRE
Sbjct: 115 ICSISSLIYVSLKAAFVFGEPAIGDGGGNYFRAAEVALFLCSSVLAIGHIVVAYRTSCRE 174

Query: 173 RKKLLVYKIDIEAVSLLISVY 193
           RKKLLV+KIDIEAVS   +VY
Sbjct: 175 RKKLLVFKIDIEAVSACKNVY 195

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356551462|ref|XP_003544094.1| PREDICTED: uncharacterized protein LOC100806343 [Glycine max]

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 130/197 (65%), Positives = 154/197 (78%), Gaps = 11/197 (5%)

Query: 1   MGFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSASLSPSSL 60
           MGF SKEEKSK + R  K +FFLITM++SLLLFSAPVLL IAD L+PSALLSA  SPSSL
Sbjct: 1   MGF-SKEEKSKRVWRGVKVVFFLITMVISLLLFSAPVLLVIADALVPSALLSA-FSPSSL 58

Query: 61  SLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLS 120
                 SHF++YDF YSL+DIPL+S+ RS VI+CVY  CDG R S GPYLG+T +CSV+S
Sbjct: 59  F-----SHFDNYDFGYSLIDIPLLSMARSLVILCVYSFCDGQRLSHGPYLGVTMLCSVMS 113

Query: 121 LIFVSLKASYVFSV---ADIDRGV-YVRAMEMALFICSLALAVGHIVVAYRTSCRERKKL 176
           L+FV LKA YVFS+    D  RG  Y R+ ++ALF+ S ALAVGH+VVAYRTSCRER+KL
Sbjct: 114 LMFVCLKAVYVFSLNTSVDERRGSGYDRSSQIALFVWSCALAVGHVVVAYRTSCRERRKL 173

Query: 177 LVYKIDIEAVSLLISVY 193
           LVYKIDIEA+S   + Y
Sbjct: 174 LVYKIDIEAISAFKNGY 190

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823919|ref|XP_002879842.1| hypothetical protein ARALYDRAFT_483049 [Arabidopsis lyrata subsp. lyrata] gi|297325681|gb|EFH56101.1| hypothetical protein ARALYDRAFT_483049 [Arabidopsis lyrata subsp. lyrata]

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 127/201 (63%), Positives = 150/201 (74%), Gaps = 14/201 (6%)

Query: 1   MGFFSKEEKSKI------ILRAFKTLFFLITMLVSLLLFSAPVLLAIADTLLPSALLSAS 54
           MGF SKEE SK       + R  KT+F L TM +S LL SAP+ LA+AD LLPSALL   
Sbjct: 1   MGF-SKEEISKTRKLSSSLWRGIKTVFVLFTMFLSFLLVSAPIFLAVADALLPSALLHRF 59

Query: 55  LSPSSLSLSTLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITT 114
            SP++LS     SH  +YDFR+SL+DIPLISIIRSAVI+CVYGLCDGP+ SRGPYL +T 
Sbjct: 60  SSPANLS-----SHLTNYDFRHSLIDIPLISIIRSAVILCVYGLCDGPKLSRGPYLTVTM 114

Query: 115 ICSVLSLIFVSLKASYVFSVADIDR--GVYVRAMEMALFICSLALAVGHIVVAYRTSCRE 172
           ICSV SL++VSLKA++VF    I    G Y RA E+ALF+CS  LA+ HI+VAYRTSCRE
Sbjct: 115 ICSVSSLVYVSLKAAFVFGEPSIGDGGGNYFRAAEVALFLCSSVLAISHIIVAYRTSCRE 174

Query: 173 RKKLLVYKIDIEAVSLLISVY 193
           RKKLLV+KIDIEAVS   +VY
Sbjct: 175 RKKLLVFKIDIEAVSACKNVY 195

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	201
TAIR|locus:504956035	209	AT2G40095 "AT2G40095" [Arabido	0.930	0.894	0.587	6.5e-51
TAIR|locus:2082043	215	SUE4 "AT3G55880" [Arabidopsis	0.950	0.888	0.544	1.5e-49
TAIR|locus:2034220	647	AT1G80280 [Arabidopsis thalian	0.920	0.285	0.389	6.1e-29
TAIR|locus:2037828	648	AT1G15490 [Arabidopsis thalian	0.870	0.270	0.376	1.2e-26
TAIR|locus:2011476	633	AT1G52750 [Arabidopsis thalian	0.835	0.265	0.361	2.1e-20

TAIR|locus:504956035 AT2G40095 "AT2G40095" [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 118/201 (58%), Positives = 136/201 (67%)

Query:     1 MGFFSKEEKSKI------ILRAFKTLFFLITMLVSLLLFSAPVLLAIADXXXXXXXXXXX 54
             MGF SKEE SK       + R  KT+F L TM  S LL SAP+ LA+AD           
Sbjct:     1 MGF-SKEEISKTRKLWSSLWRGIKTIFVLFTMFFSFLLVSAPIFLAVADALLPSALLHRF 59

Query:    55 XXXXXXXXXXXXXHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITT 114
                          H  +YDFR+SL+DIPLISIIRSAVI+CVYGLCDGP+ SRGPYL IT 
Sbjct:    60 SSPATLSS-----HLTNYDFRHSLIDIPLISIIRSAVILCVYGLCDGPKLSRGPYLTITM 114

Query:   115 ICSVLSLIFVSLKASYVFSVADIDRGV--YVRAMEMALFICSLALAVGHIVVAYRTSCRE 172
             ICS+ SLI+VSLKA++VF    I  G   Y RA E+ALF+CS  LA+GHIVVAYRTSCRE
Sbjct:   115 ICSISSLIYVSLKAAFVFGEPAIGDGGGNYFRAAEVALFLCSSVLAIGHIVVAYRTSCRE 174

Query:   173 RKKLLVYKIDIEAVSLLISVY 193
             RKKLLV+KIDIEAVS   +VY
Sbjct:   175 RKKLLVFKIDIEAVSACKNVY 195

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2082043 SUE4 "AT3G55880" [Arabidopsis thaliana (taxid:3702)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 111/204 (54%), Positives = 135/204 (66%)

Query:     1 MGFFSKEEKSKI------ILRAFKTLFFLITMLVSLLLFSAPVLLAIADXXXXXXXXXXX 54
             MG  SKEE SK       + R  KT+F L TM +S ++FSAP+ LA+AD           
Sbjct:     1 MGLISKEEISKTRRYSSSLWRGIKTIFVLFTMFLSFIIFSAPIFLAVADAVLPSAILSSS 60

Query:    55 XXXXXXXX-----XXXXXHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPY 109
                               + ++YDFRYSL+DIPLISIIRSA+I+CVYGLCDGP+ SRGPY
Sbjct:    61 SPSLNRLSPSSFPATIYSYLSNYDFRYSLIDIPLISIIRSAIILCVYGLCDGPKLSRGPY 120

Query:   110 LGITTICSVLSLIFVSLKASYVFSVADIDRGVYVRAMEMALFICSLALAVGHIVVAYRTS 169
             L IT ICS+ SLI+VS KA+ VF    I  G Y R  EMALF+CS  LA+GHIVVAYRTS
Sbjct:   121 LTITMICSISSLIYVSFKAAIVFGEPVI--GGYFRTEEMALFLCSWILAIGHIVVAYRTS 178

Query:   170 CRERKKLLVYKIDIEAVSLLISVY 193
             CRER+KLLV+KIDIE+VS   +V+
Sbjct:   179 CRERRKLLVFKIDIESVSACKNVF 202

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009970 "cellular response to sulfate starvation" evidence=IMP

TAIR|locus:2034220 AT1G80280 [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 6.1e-29, P = 6.1e-29
 Identities = 79/203 (38%), Positives = 121/203 (59%)

Query:     2 GFFSKEEKSKIILRAFKTLFFLITMLVSLLLFSAPVLLAIADXXXXXXXXXXXXXXXXXX 61
             G+F  E K++   R  +T+FF++ MLVSLL+ S PVL+AI D                  
Sbjct:     4 GWFMVE-KAR---RCLRTVFFMVAMLVSLLVSSLPVLVAIGDVLVPTFLLSSFTCLTCYG 59

Query:    62 XXXXXXHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSL 121
                   H + Y F+ SL DIPL+S++RS ++ICVY L D P  S GPYLG  ++CSV+S+
Sbjct:    60 FKE---HLSRYAFKSSLTDIPLVSLVRSFLVICVYSLSDAPALSHGPYLGTVSLCSVVSV 116

Query:   122 IFVSLKASYVFSVADID---------RGVYVR-AMEM-ALFICSLALAVGHIVVAYRTSC 170
             + +S+KA    + + ++         + ++++ +  M  LF+ S+  A+GH+VVAYRTSC
Sbjct:   117 VLLSVKACVFTANSQLNDQASSSPSRQRLHLKKSWGMPVLFLSSVVFALGHMVVAYRTSC 176

Query:   171 RERKKLLVYKIDIEAVSLLISVY 193
             R R+KLL +++D EAV    SV+
Sbjct:   177 RARRKLLYHRVDPEAVLSCKSVF 199

GO:0005737 "cytoplasm" evidence=ISM

GO:0016787 "hydrolase activity" evidence=ISS

TAIR|locus:2037828 AT1G15490 [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 72/191 (37%), Positives = 112/191 (58%)

Query:    15 RAFKTLFFLITMLVSLLLFSAPVLLAIADXXXXXXXXXXXXXXXXXXXXXXXXHFNDYDF 74
             R  +T+FF++ ML SLL+ S P+L+AI D                        H   Y F
Sbjct:    13 RCLRTVFFMVAMLASLLVSSLPLLVAIGDVLVPSFLLSSFTCVTCYGAKE---HLRRYGF 69

Query:    75 RYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSV 134
             + SL DIP++S++RS ++IC+Y L D P  S GPYLG  ++CSV+S++ +S+KA  +F+V
Sbjct:    70 KRSLTDIPIVSVVRSFLVICIYLLSDVPALSHGPYLGTVSLCSVVSVLLLSVKAC-LFTV 128

Query:   135 -------ADID---RGVYVR-AMEM-ALFICSLALAVGHIVVAYRTSCRERKKLLVYKID 182
                    A      + ++++ +  M  LF+ S+  A+GH VVAYRTSCR R+K+L +++D
Sbjct:   129 NSQLNNEASFSPSRKRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKILYHRVD 188

Query:   183 IEAVSLLISVY 193
              EAV    S++
Sbjct:   189 PEAVLSCKSIF 199

GO:0005737 "cytoplasm" evidence=ISM

GO:0016787 "hydrolase activity" evidence=ISS

TAIR|locus:2011476 AT1G52750 [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 64/177 (36%), Positives = 94/177 (53%)

Query:    15 RAFKTLFFLITMLVSLLLFSAPVLLAIADXXXXXXXXXXXXXXXXXXXXXXXXHFNDYDF 74
             R  +T+FF+  M  SLL  S PVL+ +AD                        HF  Y F
Sbjct:    15 RCLRTMFFVAAMTASLLASSLPVLITVADVVVPCLIVSSITCLTCHSPAQ---HFRQYSF 71

Query:    75 RYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSV 134
             + SL+D+PL+S+IRS VIIC+  LC+  R + G YL    + S   ++ + +K   VF+V
Sbjct:    72 KTSLIDVPLVSLIRSLVIICLSWLCEDTRLAYGLYLETVMLSSFGGILLLLVKTC-VFTV 130

Query:   135 -ADIDRG-VYVRAMEMALFICSLALAV---GHIVVAYRTSCRERKKLLVYKIDIEAV 186
              + ++   VY   +   + +  L+ AV    H+VVAYR SC  R+KL+ +KID EAV
Sbjct:   131 NSTLEEAKVYHLKISWGMPVLLLSSAVFGLAHVVVAYRKSCGARRKLMYHKIDQEAV 187


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.334   0.146   0.428    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      201       177   0.00084  109 3  11 21  0.39    31
                                                     31  0.50    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  552 (59 KB)
  Total size of DFA:  127 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.79u 0.12s 13.91t   Elapsed:  00:00:00
  Total cpu time:  13.79u 0.12s 13.91t   Elapsed:  00:00:00
  Start:  Fri May 10 01:10:42 2013   End:  Fri May 10 01:10:42 2013

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016787 "hydrolase activity" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	201
PF10457	171	MENTAL: Cholesterol-capturing domain; InterPro: IP	99.49

>PF10457 MENTAL: Cholesterol-capturing domain; InterPro: IPR019498 The following proteins share a conserved region called the MENTAL (MLN64 N-terminal) domain, composed of four transmembrane helices with three short intervening loops [, , ]: Animal MLN64 (metastatic lymph node 64), a late endosomal membrane protein containing a carboxyl-terminal cholesterol binding START domain (IPR002913 from INTERPRO)

Probab=99.49  E-value=1.2e-14  Score=121.59  Aligned_cols=105  Identities=33%  Similarity=0.444  Sum_probs=88.8

Q ss_pred             hhhhhhcccCcccccccchhHHHHHHHHHHHHHHhhcCCCCCCCCchHHHHHHHhHHHHHHHHhhhceecccccccchhh
Q 028978           63 STLSSHFNDYDFRYSLVDIPLISIIRSAVIICVYGLCDGPRRSRGPYLGITTICSVLSLIFVSLKASYVFSVADIDRGVY  142 (201)
Q Consensus        63 ~~~~~~~~~Y~FrsSLvDIPlvSi~RS~~IlCvY~~Cdgp~Ls~gpYLgit~~cs~~S~~~vsvKA~~Vf~~~~~~~~~~  142 (201)
                      ..+..|..+|+||+||.||++++++|.++++++|++|   ++.|+++.++||++|.   .|+.+|+. +|. +...++. 
T Consensus        35 ~~l~~ei~~Y~~~~SLFDivllA~~Rf~vLil~Ya~~---rl~hw~~iaitT~~S~---afli~Kv~-~~~-~~~s~~~-  105 (171)
T PF10457_consen   35 SALQNEINHYDFKTSLFDIVLLAIFRFLVLILFYALL---RLRHWWPIAITTLVSC---AFLIVKVF-FFD-STSSQNA-  105 (171)
T ss_pred             HHHHHHHhheehhhhHHHHHHHHHHHHHHHHHHHHHh---ccCcceEeEeHHhhhh---HHhhheee-EEe-cccCCCC-
Confidence            6799999999999999999999999999999999999   5669999999987654   58889997 664 2222221 


Q ss_pred             HhhhhHHHHHHHHHHHHhHH-HHHhhhhhhhhhhhccc
Q 028978          143 VRAMEMALFICSLALAVGHI-VVAYRTSCRERKKLLVY  179 (201)
Q Consensus       143 ~~~~~~~LflsS~vfAl~Hi-vvAYRtSCraRRKLlv~  179 (201)
                         .+-+|+++|+++|-++. ++.||--.|||++.-.+
T Consensus       106 ---~~y~L~I~SfvlaW~E~WfldfrVlPqE~~~~~~~  140 (171)
T PF10457_consen  106 ---FEYLLIITSFVLAWIETWFLDFRVLPQEREAERRY  140 (171)
T ss_pred             ---ceEEehHHHHHHHHHHHHHHhheecchhHHHHHHH
Confidence               23589999999999999 99999999999998655

It is probably involved in intracellular cholesterol transport. Mammalian MENTHO (MLN64 N-terminal domain homologue), a late endosomal protein containing only the MENTAL domain. It is probably involved in cellular cholesterol homoeostasis. The ~170-amino acid MENTAL domain mediates MLN64 and MENTHO homo- and hetero- interactions, targets both proteins to late endosomes and binds cholesterol. The MENTAL domain might serve to maintain cholesterol at the membrane of late endosomes prior to its shuttle to cytoplasmic acceptor(s) through the START domain.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00