Citrus Sinensis ID: 029146

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MCADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSGRSLHDIVMVKHCCIYCQFYIK
Secondary Structure (PSIPRED)
ccccccccccHHHHHcccccccccccccccHHHHcccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccEEEccHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccHcHHHHHcccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccEEEEEHHHHHHHHHHHHcccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mcaddatcgtptwigkgltcvcfkrkgtyeRICINLTPQQAERLRRLKHRMKVyfdasrpdHQEALRALWAatypdqelhgLISDQWkemgwqgkdpstdfrgagfISLENLLFFAKTFSTSFQRLLRKqggkradweypfavAGVNITFMLMQMLdleatkprtFVRSVFLQMlsgrslhdiVMVKHCCIYCQFYIK
Flexible Loop (DISEMBL)
mcaddatcgtptwigkgltCVCFKRKGTYericinltpqQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQggkradweyPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSgrslhdivMVKHCCIYCQFYIK
Low Complexity Region (SEG)
MCADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSGRSLHDIVMVKHCCIYCQFYIK
Disordered region (IsUnstruct)
******TCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSGRSLHDIVMVKHCCIYCQFYI*
Disordered Region (DISOPRED)
***DDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATY*************KEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLR*****RADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSGRSLHDIVMVKHCCIYCQFYIK
Disordered Region (DISEMBL)
********GTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSGRSLHDIVMVKHCCIYCQFYIK
Disordered Region (DISPRO)
*CADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSGRSLHDIVMVKHCCIYCQFYIK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSGRSLHDIVMVKHCCIYCQFYIK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	198	2.2.26 [Sep-21-2011]
Q54YW1	977	ELMO domain-containing pr	yes	no	0.565	0.114	0.398	6e-21
Q54VR8	284	ELMO domain-containing pr	no	no	0.555	0.387	0.336	5e-18
Q54RS7	618	ELMO domain-containing pr	no	no	0.585	0.187	0.333	9e-18
Q8IZ81	293	ELMO domain-containing pr	yes	no	0.535	0.361	0.361	6e-17
Q8BGF6	293	ELMO domain-containing pr	yes	no	0.702	0.474	0.301	9e-17
Q5NVD7	326	ELMO domain-containing pr	no	no	0.555	0.337	0.366	4e-16
Q0IIE6	326	ELMO domain-containing pr	yes	no	0.555	0.337	0.358	1e-15
Q08DZ3	293	ELMO domain-containing pr	no	no	0.535	0.361	0.342	1e-15
Q8N336	334	ELMO domain-containing pr	no	no	0.555	0.329	0.352	2e-15
Q3V1U8	326	ELMO domain-containing pr	no	no	0.555	0.337	0.351	2e-15

>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1

 Score =  100 bits (249), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 1/113 (0%)

Query: 40  QAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPST 99
           Q  R + + +R  V F+    +H   L  LW+ TYP  +L   +S+QWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query: 100 DFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFML 152
           DFR  G   L+NL++FA+ ++  F++++  Q   R + EYP A AG+ +TF L
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQ-IDRKEREYPTATAGIVLTFEL 473

Functions as a negative regulator of actin polymerization. Modulates actin/myosin II at cortex actinomyosins to prevent excessive F-actin polymerization around the cell periphery, thereby maintaining proper cell shape during phagocytosis and chemotaxis.
Dictyostelium discoideum (taxid: 44689)

>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=4 SV=1

 Score = 90.9 bits (224), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 68/113 (60%), Gaps = 3/113 (2%)

Query: 45  RRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGA 104
           + ++ + K+ +D +  +H+ +L  LW A  PD      +S +W  +G+QG DP+TDFRG 
Sbjct: 108 KSIEKKQKIPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGM 167

Query: 105 GFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLD 157
           G + L+NL++F+   S   + +L+    K     YPFA+ G+NIT +++ ++D
Sbjct: 168 GILGLDNLIYFSTQHSEDAREILKNSNSKCC---YPFAITGINITALVLNLID 217

Dictyostelium discoideum (taxid: 44689)

>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=4 SV=1

 Score = 90.1 bits (222), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/123 (33%), Positives = 73/123 (59%), Gaps = 7/123 (5%)

Query: 36  LTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGK 95
           +T +Q++ ++ L  +    ++++ PDH+E L+ LW+  YP+QE     S  WK+ G+Q  
Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query: 96  DPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQM 155
           DP+ DFRG G + L NL+   +  +   Q +L +      D +YPFAVAG+NI+ ++ ++
Sbjct: 416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ------DRDYPFAVAGINISNLIFEV 469

Query: 156 LDL 158
             +
Sbjct: 470 FQI 472

Dictyostelium discoideum (taxid: 44689)

>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1

 Score = 87.4 bits (215), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 2/108 (1%)

Query: 55  FDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLF 114
           +D+    H+E L  LW    P ++L+  IS QW E+G+QG DP TDFRG G + L NL++
Sbjct: 120 YDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 115 FAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATK 162
           F++ +++   ++L +    +    Y +A+ G+N+T M   +L  EA K
Sbjct: 180 FSENYTSEAHQILSRSNHPKLG--YSYAIVGINLTEMAYSLLKSEALK 225

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family. Regulates IFN-related antiviral responses.

Homo sapiens (taxid: 9606)

>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 82/146 (56%), Gaps = 7/146 (4%)

Query: 21  VCFKRKGTYERICINLTPQQAERLRRLKHRM----KVYFDASRPDHQEALRALWAATYPD 76
           +C ++  +++ IC+     Q    ++L H +    K  +D++   H++ L  LW+   P 
Sbjct: 83  ICSEKDTSFQ-ICMRTCLLQITGYKQLYHDVENVRKKPYDSANAQHEKMLLKLWSLLMPT 141

Query: 77  QELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRAD 136
           ++L   IS QW ++G+QG DP TDFRG G + L NL++F++ +++   ++L +    +  
Sbjct: 142 KKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKLG 201

Query: 137 WEYPFAVAGVNITFMLMQMLDLEATK 162
             Y +A+ G+N+T M   +L  EA K
Sbjct: 202 --YSYAIVGINLTEMAYSLLKSEALK 225

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Mus musculus (taxid: 10090)

>sp|Q5NVD7|ELMD1_PONAB ELMO domain-containing protein 1 OS=Pongo abelii GN=ELMOD1 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 21/131 (16%)

Query: 41  AERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTD 100
            E+LRR        +D+  P H+E L  LW    P+  L   IS QW E+G+QG DP TD
Sbjct: 119 VEKLRREP------YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTD 172

Query: 101 FRGAGFISLENLLFFAKTFSTSFQRLLRK------QGGKRADWE---------YPFAVAG 145
           FRG G + L NL +FA+  +T+ Q++L            +A+WE         Y FA+ G
Sbjct: 173 FRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVG 232

Query: 146 VNITFMLMQML 156
           +NIT +   +L
Sbjct: 233 INITDLAYNLL 243

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Pongo abelii (taxid: 9601)

>sp|Q0IIE6|ELMD1_BOVIN ELMO domain-containing protein 1 OS=Bos taurus GN=ELMOD1 PE=2 SV=1

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 21/131 (16%)

Query: 41  AERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTD 100
            E+LRR        +D+  P H+E L  LW    P+  L   IS QW E+G+QG DP TD
Sbjct: 119 VEKLRRES------YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTD 172

Query: 101 FRGAGFISLENLLFFAKTFSTSFQRLLRK------QGGKRADWE---------YPFAVAG 145
           FRG G + L NL +FA+  + + Q++L            +A+WE         Y FA+ G
Sbjct: 173 FRGMGLLGLYNLQYFAERDAAAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVG 232

Query: 146 VNITFMLMQML 156
           +NIT +   +L
Sbjct: 233 INITDLAYNLL 243

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 2/108 (1%)

Query: 55  FDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLF 114
           +D+    H++ L  LW    P ++L   IS QW ++G+QG DP TDFRG G + L NL++
Sbjct: 120 YDSDNLQHEKLLIKLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 115 FAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATK 162
           F++ +++   ++L +    +    Y +A+ G+N+T M   +L  EA K
Sbjct: 180 FSENYTSEAHQILSRSNHPKLG--YSYAIVGINLTEMAYSLLKSEALK 225

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q8N336|ELMD1_HUMAN ELMO domain-containing protein 1 OS=Homo sapiens GN=ELMOD1 PE=2 SV=3

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 29/139 (20%)

Query: 41  AERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTD 100
            E+LRR        +D+  P H+E L  LW    P+  L   IS QW E+G+QG DP TD
Sbjct: 119 VEKLRR------EAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTD 172

Query: 101 FRGAGFISLENLLFFAKTFSTSFQRLL------------RKQGGK--RADWE-------- 138
           FRG G + L NL +FA+  +T+ Q++L            +++  K  +A+WE        
Sbjct: 173 FRGMGLLGLYNLQYFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAI 232

Query: 139 -YPFAVAGVNITFMLMQML 156
            Y FA+ G+NIT +   +L
Sbjct: 233 GYSFAIVGINITDLAYNLL 251

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Homo sapiens (taxid: 9606)

>sp|Q3V1U8|ELMD1_MOUSE ELMO domain-containing protein 1 OS=Mus musculus GN=Elmod1 PE=2 SV=2

 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 21/131 (16%)

Query: 41  AERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTD 100
            E+LRR        +D+  P H+E L  LW    P+  L   +S QW E+G+QG DP TD
Sbjct: 119 VEKLRREP------YDSDNPQHEEMLLKLWELLKPNTPLESRVSKQWCEIGFQGDDPKTD 172

Query: 101 FRGAGFISLENLLFFAKTFSTSFQRLLRKQGG------KRADWE---------YPFAVAG 145
           FRG G + L NL +FA+  +T  Q++L            + +WE         Y FA+ G
Sbjct: 173 FRGMGLLGLYNLQYFAERDATVAQQVLSDSVHPKCSKFSKIEWEKKKMDKAIGYSFAIVG 232

Query: 146 VNITFMLMQML 156
           +NIT +   +L
Sbjct: 233 INITDLAYNLL 243

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
255547738	259	ELMO domain-containing protein, putative	0.888	0.679	0.886	3e-92
224110714	239	predicted protein [Populus trichocarpa]	0.878	0.728	0.868	7e-87
449435069	276	PREDICTED: ELMO domain-containing protei	0.878	0.630	0.844	7e-85
297738445	269	unnamed protein product [Vitis vinifera]	0.878	0.646	0.890	7e-84
225425436	301	PREDICTED: ELMO domain-containing protei	0.878	0.578	0.890	9e-84
253761537	249	hypothetical protein SORBIDRAFT_0019s004	0.878	0.698	0.821	1e-83
115485527	250	Os11g0483900 [Oryza sativa Japonica Grou	0.878	0.696	0.816	1e-82
108864397	285	phagocytosis and cell motility protein E	0.878	0.610	0.816	1e-82
194693986	287	unknown [Zea mays] gi|413920846|gb|AFW60	0.873	0.602	0.820	2e-82
357156783	282	PREDICTED: ELMO domain-containing protei	0.873	0.613	0.809	1e-81

>gi|255547738|ref|XP_002514926.1| ELMO domain-containing protein, putative [Ricinus communis] gi|223545977|gb|EEF47480.1| ELMO domain-containing protein, putative [Ricinus communis]

 Score =  343 bits (879), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 156/176 (88%), Positives = 170/176 (96%)

Query: 1   MCADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRP 60
           + +DDATCGTPTWIGKGLTCVCFKRKG YERICINLTP Q ERL+RL+HRMK+YFDASRP
Sbjct: 20  LSSDDATCGTPTWIGKGLTCVCFKRKGAYERICINLTPHQEERLKRLRHRMKIYFDASRP 79

Query: 61  DHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFS 120
           DHQEALRALW+ATYPDQ+L GLISDQWKEMGWQG+DPSTDFRGAGFISLENLLFFAKTFS
Sbjct: 80  DHQEALRALWSATYPDQQLRGLISDQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFS 139

Query: 121 TSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
           TSFQRLL+KQGGKR+ WEYPFAVAGVN+TFM+MQMLDL+A+KPRTFVRSVFLQMLS
Sbjct: 140 TSFQRLLKKQGGKRSAWEYPFAVAGVNVTFMIMQMLDLDASKPRTFVRSVFLQMLS 195

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110714|ref|XP_002315612.1| predicted protein [Populus trichocarpa] gi|222864652|gb|EEF01783.1| predicted protein [Populus trichocarpa]

 Score =  325 bits (833), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 152/175 (86%), Positives = 166/175 (94%), Gaps = 1/175 (0%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           ADDATCG+PTWIGKGLTCVCFKRKG YERICINLTPQQA+RL+RLK RMKVYFDASRP+H
Sbjct: 1   ADDATCGSPTWIGKGLTCVCFKRKGAYERICINLTPQQAKRLKRLKDRMKVYFDASRPEH 60

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFR-GAGFISLENLLFFAKTFST 121
           Q+ALRALW+ATYPD+EL GLISDQWKEMGWQG+DPSTDFR GAGF+SLENL+FFAKTFS 
Sbjct: 61  QDALRALWSATYPDRELSGLISDQWKEMGWQGRDPSTDFRLGAGFLSLENLVFFAKTFSI 120

Query: 122 SFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
           SFQ LLRKQGGKR+ WEYPFAVAGVNITFM+MQMLDL+A KPRTFVR VFLQ+LS
Sbjct: 121 SFQHLLRKQGGKRSAWEYPFAVAGVNITFMIMQMLDLDAMKPRTFVRPVFLQILS 175

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435069|ref|XP_004135318.1| PREDICTED: ELMO domain-containing protein A-like [Cucumis sativus] gi|449494913|ref|XP_004159681.1| PREDICTED: ELMO domain-containing protein A-like [Cucumis sativus]

 Score =  318 bits (815), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 147/174 (84%), Positives = 159/174 (91%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           +D  TCGTPTWIGKG+TC+CFKRKG+ ERICINLTP Q +RLRRLKHRMKVYFD SR +H
Sbjct: 34  SDYVTCGTPTWIGKGITCICFKRKGSLERICINLTPVQEDRLRRLKHRMKVYFDGSRINH 93

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEALRALW A YP QEL  L+SDQWKEMGWQG+DPSTDFRGAGFISLENLLFFAKTFSTS
Sbjct: 94  QEALRALWYAAYPGQELQALVSDQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFSTS 153

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
           FQ LLRKQGGK A WEYPFAVAGVNITFM+MQMLDL+A+KPRTF+RSVFLQMLS
Sbjct: 154 FQLLLRKQGGKPAAWEYPFAVAGVNITFMIMQMLDLDASKPRTFIRSVFLQMLS 207

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738445|emb|CBI27646.3| unnamed protein product [Vitis vinifera]

 Score =  315 bits (806), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 155/174 (89%), Positives = 166/174 (95%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           +DD TCGTPTWIG+GLTCVCFKRKGTYERICINLTP Q ERLRRL+HRMKVYFDASRPDH
Sbjct: 32  SDDVTCGTPTWIGRGLTCVCFKRKGTYERICINLTPHQEERLRRLRHRMKVYFDASRPDH 91

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEALRALW+ATYP QELHGLIS+QWKEMGWQG+DPSTDFRGAGFISLENLLFFAKTFS S
Sbjct: 92  QEALRALWSATYPGQELHGLISEQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFSIS 151

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
           FQ LL+KQ GKRA WEYPFAVAGVNITFM+MQMLDL+A+KPRTFVR+VFLQMLS
Sbjct: 152 FQLLLKKQRGKRAAWEYPFAVAGVNITFMIMQMLDLDASKPRTFVRAVFLQMLS 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425436|ref|XP_002271815.1| PREDICTED: ELMO domain-containing protein A-like [Vitis vinifera]

 Score =  315 bits (806), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 155/174 (89%), Positives = 166/174 (95%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           +DD TCGTPTWIG+GLTCVCFKRKGTYERICINLTP Q ERLRRL+HRMKVYFDASRPDH
Sbjct: 64  SDDVTCGTPTWIGRGLTCVCFKRKGTYERICINLTPHQEERLRRLRHRMKVYFDASRPDH 123

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEALRALW+ATYP QELHGLIS+QWKEMGWQG+DPSTDFRGAGFISLENLLFFAKTFS S
Sbjct: 124 QEALRALWSATYPGQELHGLISEQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFSIS 183

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
           FQ LL+KQ GKRA WEYPFAVAGVNITFM+MQMLDL+A+KPRTFVR+VFLQMLS
Sbjct: 184 FQLLLKKQRGKRAAWEYPFAVAGVNITFMIMQMLDLDASKPRTFVRAVFLQMLS 237

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|253761537|ref|XP_002489147.1| hypothetical protein SORBIDRAFT_0019s004720 [Sorghum bicolor] gi|241947246|gb|EES20391.1| hypothetical protein SORBIDRAFT_0019s004720 [Sorghum bicolor]

 Score =  314 bits (804), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 143/174 (82%), Positives = 162/174 (93%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           A++A+CG+P WIG+GL+CVC KRKGTYERIC+NLTP Q ERL+RLKHRMKVYFD SR DH
Sbjct: 12  ANEASCGSPRWIGRGLSCVCIKRKGTYERICMNLTPVQEERLQRLKHRMKVYFDPSRRDH 71

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEAL+ALW ATYPDQEL GLIS+QWK+MGWQG+DPSTDFRGAGFISLENLLFFAKTFS S
Sbjct: 72  QEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSAS 131

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
           FQRLL+KQ G RA WEYPFAVAGVNITFM+MQMLDL++TKPRTFVR++F+QMLS
Sbjct: 132 FQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAIFIQMLS 185

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115485527|ref|NP_001067907.1| Os11g0483900 [Oryza sativa Japonica Group] gi|108864396|gb|ABG22490.1| phagocytosis and cell motility protein ELMO1, putative, expressed [Oryza sativa Japonica Group] gi|113645129|dbj|BAF28270.1| Os11g0483900 [Oryza sativa Japonica Group] gi|215687310|dbj|BAG91897.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 142/174 (81%), Positives = 160/174 (91%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           A++A+CG+P WIGK L+CVC KRKG YERIC+NLTP Q ERL+RL+HRMKVYFD SR DH
Sbjct: 13  ANEASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKVYFDPSRRDH 72

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEAL+ALW ATYPDQEL GLIS+QWK+MGWQG+DPSTDFRGAGFISLENLLFFAKTFS S
Sbjct: 73  QEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSAS 132

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
           FQRLL+KQ G RA WEYPFAVAGVNITFM+MQMLDL++TKPRTFVR+VF+QMLS
Sbjct: 133 FQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLS 186

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|108864397|gb|ABA93689.2| phagocytosis and cell motility protein ELMO1, putative, expressed [Oryza sativa Japonica Group] gi|218185744|gb|EEC68171.1| hypothetical protein OsI_36117 [Oryza sativa Indica Group] gi|222615973|gb|EEE52105.1| hypothetical protein OsJ_33903 [Oryza sativa Japonica Group]

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 142/174 (81%), Positives = 160/174 (91%)

Query: 3   ADDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDH 62
           +D+A+CG+P WIGK L+CVC KRKG YERIC+NLTP Q ERL+RL+HRMKVYFD SR DH
Sbjct: 48  SDEASCGSPRWIGKSLSCVCIKRKGAYERICMNLTPVQEERLQRLRHRMKVYFDPSRRDH 107

Query: 63  QEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS 122
           QEAL+ALW ATYPDQEL GLIS+QWK+MGWQG+DPSTDFRGAGFISLENLLFFAKTFS S
Sbjct: 108 QEALKALWHATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSAS 167

Query: 123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
           FQRLL+KQ G RA WEYPFAVAGVNITFM+MQMLDL++TKPRTFVR+VF+QMLS
Sbjct: 168 FQRLLKKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLS 221

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|194693986|gb|ACF81077.1| unknown [Zea mays] gi|413920846|gb|AFW60778.1| hypothetical protein ZEAMMB73_514808 [Zea mays]

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 142/173 (82%), Positives = 159/173 (91%)

Query: 4   DDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQ 63
           D+ +CG+P WIG+GL+CVC KRKGTYERIC+NLTP Q ERL+RLKHRMKVYFD SR DHQ
Sbjct: 51  DETSCGSPRWIGRGLSCVCIKRKGTYERICMNLTPVQEERLQRLKHRMKVYFDPSRRDHQ 110

Query: 64  EALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSF 123
           EAL+ALW ATYPDQEL GLIS+QWK+MGWQG+DPSTDFRGAGFISLENLLFFAKTFS SF
Sbjct: 111 EALKALWHATYPDQELEGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSASF 170

Query: 124 QRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
           QRLL KQ G RA WEYPFAVAGVNITFM+MQMLDL++TKPRTFVR++F+QMLS
Sbjct: 171 QRLLNKQCGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAIFIQMLS 223

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357156783|ref|XP_003577574.1| PREDICTED: ELMO domain-containing protein A-like [Brachypodium distachyon]

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 140/173 (80%), Positives = 159/173 (91%)

Query: 4   DDATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQ 63
           D+A+CG+P WI KGL+CVC KR+G YERIC+NLTP Q +RL+RL+HRMKVYFD SR +HQ
Sbjct: 46  DEASCGSPKWIEKGLSCVCIKRRGAYERICMNLTPLQEQRLQRLRHRMKVYFDPSRRNHQ 105

Query: 64  EALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSF 123
           EALRALW ATYPDQEL GLIS+QWK+MGWQG+DPSTDFRGAGFISLENLLFFAKTFS SF
Sbjct: 106 EALRALWYATYPDQELQGLISEQWKDMGWQGRDPSTDFRGAGFISLENLLFFAKTFSASF 165

Query: 124 QRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
           QRLL+KQ G RA WEYPFAVAGVNITFM+MQMLDL++TKPRTFVR+VF+QMLS
Sbjct: 166 QRLLKKQSGNRATWEYPFAVAGVNITFMIMQMLDLQSTKPRTFVRAVFIQMLS 218

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	198
TAIR|locus:2019544	281	AT1G67400 [Arabidopsis thalian	0.878	0.619	0.812	3.5e-75
TAIR|locus:2042456	266	AT2G44770 "AT2G44770" [Arabido	0.909	0.676	0.602	7.5e-57
TAIR|locus:2081947	266	AT3G60260 "AT3G60260" [Arabido	0.909	0.676	0.591	6.8e-56
TAIR|locus:2096389	323	AT3G03610 "AT3G03610" [Arabido	0.843	0.517	0.571	7.9e-46
TAIR|locus:2020753	265	AT1G03620 "AT1G03620" [Arabido	0.828	0.618	0.565	2.1e-45
TAIR|locus:2102276	213	AT3G43400 "AT3G43400" [Arabido	0.510	0.474	0.8	2e-40
DICTYBASE|DDB_G0280179	284	elmoB "engulfment and cell mot	0.555	0.387	0.336	3.2e-21
DICTYBASE|DDB_G0278051	977	elmoA "engulfment and cell mot	0.565	0.114	0.389	5.3e-19
RGD|1587598	293	Elmod2 "ELMO/CED-12 domain con	0.696	0.470	0.319	2.2e-18
FB|FBgn0037473	316	CG10068 [Drosophila melanogast	0.742	0.465	0.309	3.6e-18

TAIR|locus:2019544 AT1G67400 [Arabidopsis thaliana (taxid:3702)]

 Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
 Identities = 143/176 (81%), Positives = 157/176 (89%)

Query:     3 ADDATCG-TPTW-IGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRP 60
             A+DA+C  TP+W I K LTCVCF RK  YERIC NLTP Q ERL+RL+ RMK Y+DASRP
Sbjct:    42 AEDASCSSTPSWRIKKSLTCVCFNRKRAYERICSNLTPLQEERLKRLRKRMKNYYDASRP 101

Query:    61 DHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFS 120
             DHQ+ALRALW+ATYPD++L  LISDQWK MGWQGKDPSTDFRGAGFISLENLLFFAKTFS
Sbjct:   102 DHQDALRALWSATYPDEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLFFAKTFS 161

Query:   121 TSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
             TSFQRLL KQGGKRA WEYPFAVAGVNITFM+MQMLDLEA+KPR+F+R VFLQMLS
Sbjct:   162 TSFQRLLNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLS 217

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2042456 AT2G44770 "AT2G44770" [Arabidopsis thaliana (taxid:3702)]

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 109/181 (60%), Positives = 140/181 (77%)

Query:     5 DATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQE 64
             +A  G+  W+G+GL+CVC +R+ +      +LTP Q E L+ L++R+ V +D++ P HQE
Sbjct:    30 EAVPGSAAWLGRGLSCVCAQRRDSDANSTFDLTPAQEECLQSLQNRIDVAYDSTIPLHQE 89

Query:    65 ALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQ 124
             ALR LW  ++P++ELHGLIS+QWKEMGWQGKDPSTDFRG GFISLENLL+FA+ F  SFQ
Sbjct:    90 ALRELWKLSFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARNFQKSFQ 149

Query:   125 RLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS-GRSLHDI 183
              LLRKQ G R+ WEYPFAVAG+N+TFML+QMLDLEA KPRT V + FL+ LS   S  D+
Sbjct:   150 DLLRKQVGDRSVWEYPFAVAGINLTFMLIQMLDLEAVKPRTIVGATFLKFLSENESAFDL 209

Query:   184 V 184
             +
Sbjct:   210 L 210

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2081947 AT3G60260 "AT3G60260" [Arabidopsis thaliana (taxid:3702)]

 Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
 Identities = 107/181 (59%), Positives = 135/181 (74%)

Query:     5 DATCGTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQE 64
             +   G+  W+G+GL+CVC + +    R   +LTP Q E L+RL+ R+ V +D+S P HQE
Sbjct:    30 EVVAGSAAWLGRGLSCVCVQGRDGDPRPSFDLTPAQEECLQRLQSRIDVAYDSSIPQHQE 89

Query:    65 ALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQ 124
             AL+ LW   +P++ELHG++SDQWKEMGWQGKDPSTDFRG GFISLENLL+FA+ F  SF 
Sbjct:    90 ALKDLWKLAFPEEELHGIVSDQWKEMGWQGKDPSTDFRGGGFISLENLLYFARKFPKSFH 149

Query:   125 RLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS-GRSLHDI 183
              LLRKQ G R+ WEYPFAVAG+NITFML+QMLDLEA KPR+ V   FL+ LS   S  D+
Sbjct:   150 GLLRKQVGDRSVWEYPFAVAGINITFMLIQMLDLEAVKPRSIVGETFLRFLSVNESAFDL 209

Query:   184 V 184
             +
Sbjct:   210 L 210

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2096389 AT3G03610 "AT3G03610" [Arabidopsis thaliana (taxid:3702)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 96/168 (57%), Positives = 120/168 (71%)

Query:     9 GTPTWIGKGLTCVCFKRKGTYERICIN-LTPQQAERLRRLKHRMKVYFDASRPDHQEALR 67
             G+ + +G+ L+   F + GT  R+    L+  Q ERLR +K R+++ FD SR +HQ+ALR
Sbjct:    90 GSGSLVGRFLSLPTFGQIGTGGRLLPPPLSMLQEERLRNIKRRIEIPFDGSRMEHQDALR 149

Query:    68 ALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLL 127
              LW   YP +EL  L S+ WKEMGWQG DPSTDFRG G+ISLENL+FFAKT+  SFQRLL
Sbjct:   150 QLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISLENLIFFAKTYPESFQRLL 209

Query:   128 RKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQML 175
              KQ G RA+WEYPFAVAG+NI+FML QMLDL++ KP T     FL  L
Sbjct:   210 HKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAGIRFLGFL 257

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2020753 AT1G03620 "AT1G03620" [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 95/168 (56%), Positives = 123/168 (73%)

Query:     9 GTPTWIGKGLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRA 68
             GT +WIG GL     +R+   + +   L+P Q ERL+RL+ RM V FD +RPDHQE+L+A
Sbjct:    35 GTRSWIG-GLFTRSNRRQD--KAVDYTLSPLQEERLQRLQDRMVVPFDETRPDHQESLKA 91

Query:    69 LWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLR 128
             LW   +P+  L GL+++QWKEMGWQG +PSTDFRG GFI+LENLLF A+T+   F+RLL 
Sbjct:    92 LWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYPVCFRRLLL 151

Query:   129 KQGGKRADWEYPFAVAGVNITFMLMQMLDLEAT-KPRTFVRSVFLQML 175
             KQ G RA WEYPFAVAG+NI+FML+QMLDL+   KP+      FL++L
Sbjct:   152 KQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLL 199

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2102276 AT3G43400 "AT3G43400" [Arabidopsis thaliana (taxid:3702)]

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 84/105 (80%), Positives = 92/105 (87%)

Query:    72 ATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQG 131
             +TY D++L  LISDQWK MGWQ KDPSTDFRG GFISLENL FFAKTFS    RLL+KQG
Sbjct:    71 STYADEKLQDLISDQWKNMGWQRKDPSTDFRGDGFISLENLRFFAKTFS----RLLKKQG 126

Query:   132 GKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLS 176
             GKRA WEYPFAVAGVNITFM+MQMLDLEA+KPR+F+R VFLQMLS
Sbjct:   127 GKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLS 171

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

DICTYBASE|DDB_G0280179 elmoB "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 223 (83.6 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
 Identities = 38/113 (33%), Positives = 68/113 (60%)

Query:    45 RRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGA 104
             + ++ + K+ +D +  +H+ +L  LW A  PD      +S +W  +G+QG DP+TDFRG 
Sbjct:   108 KSIEKKQKIPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGM 167

Query:   105 GFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLD 157
             G + L+NL++F+   S   + +L+    K     YPFA+ G+NIT +++ ++D
Sbjct:   168 GILGLDNLIYFSTQHSEDAREILKNSNSKCC---YPFAITGINITALVLNLID 217

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0278051 elmoA "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 240 (89.5 bits), Expect = 5.3e-19, P = 5.3e-19
 Identities = 44/113 (38%), Positives = 70/113 (61%)

Query:    40 QAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPST 99
             Q  R + + +R  V F+    +H   L  LW+ TYP  +L   +S+QWK+MG+QG DP T
Sbjct:   362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query:   100 DFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFML 152
             DFR  G   L+NL++FA+ ++  F++++  Q  ++ + EYP A AG+ +TF L
Sbjct:   422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQIDRK-EREYPTATAGIVLTFEL 473

GO:0030864 "cortical actin cytoskeleton" evidence=IDA

GO:0050764 "regulation of phagocytosis" evidence=IMP

GO:0048870 "cell motility" evidence=IMP

GO:0045159 "myosin II binding" evidence=IPI

GO:0030837 "negative regulation of actin filament polymerization" evidence=IMP

GO:0030587 "sorocarp development" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

RGD|1587598 Elmod2 "ELMO/CED-12 domain containing 2" [Rattus norvegicus (taxid:10116)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 47/147 (31%), Positives = 82/147 (55%)

Query:    21 VCFKRKGTYERICINLTPQQAERLRRLKH-----RMKVYFDASRPDHQEALRALWAATYP 75
             +C ++  +++ IC+     Q    R+L H     R K Y D++   H++ L  LW+   P
Sbjct:    83 ICPEKDSSFQ-ICMRTCLLQITGYRQLYHDVENVRKKPY-DSANAQHEKLLLKLWSLLMP 140

Query:    76 DQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRA 135
              ++L   IS QW ++G+QG DP TDFRG G + L NL++F++ +++   ++L +    + 
Sbjct:   141 TKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKL 200

Query:   136 DWEYPFAVAGVNITFMLMQMLDLEATK 162
              + Y  A+ G+N+T M   +L  EA K
Sbjct:   201 GYSY--AIVGINLTEMAYSLLKSEALK 225

GO:0005096 "GTPase activator activity" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0043547 "positive regulation of GTPase activity" evidence=ISO

GO:0050688 "regulation of defense response to virus" evidence=ISO

FB|FBgn0037473 CG10068 [Drosophila melanogaster (taxid:7227)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 48/155 (30%), Positives = 81/155 (52%)

Query:    45 RRLKHRMKVY----FDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTD 100
             RRL H+++      +D+   DH++ L  LW    PD  L G ++ QW+++G+QG DP TD
Sbjct:   120 RRLMHQVEQLRAEKYDSDNLDHEQKLLRLWQLLMPDTPLTGRVTKQWQDIGFQGDDPKTD 179

Query:   101 FRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEA 160
             FRG G + LENLL+FA  ++ + + +L           Y +A+ G+N+T M   ++   A
Sbjct:   180 FRGMGMLGLENLLYFATAYNDAAKHVLLHS--MHPTLGYTYAIVGINLTSMAFNLVKTGA 237

Query:   161 TKPRTFVRSVFLQMLSGRSLHDIVMVKHCCIYCQF 195
              K   F   V        ++ D   + +C ++ +F
Sbjct:   238 AKTH-FYNLVVQHRQDFSTVEDFHKL-YCYLFFEF 270

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0000910 "cytokinesis" evidence=IMP

GO:0090175 "regulation of establishment of planar polarity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	198
pfam04727	170	pfam04727, ELMO_CED12, ELMO/CED-12 family	5e-53

>gnl|CDD|218231 pfam04727, ELMO_CED12, ELMO/CED-12 family

 Score =  167 bits (424), Expect = 5e-53
 Identities = 52/130 (40%), Positives = 79/130 (60%)

Query: 42  ERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDF 101
             L  L+   K  FD   P+H+  L+ LW A +PD+ L   +S++WK++G+QG DP+TDF
Sbjct: 1   LTLNLLEKLRKTPFDLENPEHRRLLKTLWKALFPDEPLSSRVSEKWKDLGFQGDDPATDF 60

Query: 102 RGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEAT 161
           RG G + L NLL+FA+ +   FQ+LL +   + A+ EYPFAVA +N+T ML ++L +   
Sbjct: 61  RGTGLLGLLNLLYFAENYPDEFQKLLLESSHRPAEHEYPFAVASINVTSMLYELLRIGKL 120

Query: 162 KPRTFVRSVF 171
               +    F
Sbjct: 121 DQEDYKNYGF 130

This family represents a conserved domain which is found in a number of eukaryotic proteins including CED-12, ELMO I and ELMO II. ELMO1 is a component of signalling pathways that regulate phagocytosis and cell migration and is the mammalian orthologue of the C. elegans gene, ced-12. CED-12 is required for the engulfment of dying cells and cell migration. In mammalian cells, ELMO1 interacts with Dock180 as part of the CrkII/Dock180/Rac pathway responsible for phagocytosis and cell migration. ELMO1 is ubiquitously expressed, although its expression is highest in the spleen, an organ rich in immune cells. ELMO1 has a PH domain and a polyproline sequence motif at its C terminus which are not present in this alignment. Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	198
KOG2998	302	consensus Uncharacterized conserved protein [Funct	100.0
PF04727	170	ELMO_CED12: ELMO/CED-12 family; InterPro: IPR00681	100.0
KOG2999	713	consensus Regulator of Rac1, required for phagocyt	99.91

>KOG2998 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=5.3e-48  Score=333.86  Aligned_cols=185  Identities=46%  Similarity=0.781  Sum_probs=171.2

Q ss_pred             CCCccccccccceec-----cccccccccCCCCccccccCCHHHHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHhCCC
Q 029146            2 CADDATCGTPTWIGK-----GLTCVCFKRKGTYERICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPD   76 (198)
Q Consensus         2 ~~~~~~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~L~~~Q~~~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~   76 (198)
                      ++++...|+.+|+|+     ++.|.+.+.+..+...+....+.|.+.+..+++++++|||.+|++|+++|++||+.++|+
T Consensus        64 ass~~~~~~~~~~~~v~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~l~~~~e~~~~~~yDs~n~~H~e~L~~lwk~~~p~  143 (302)
T KOG2998|consen   64 ASSEAPPGLISFLGRVMVDKGIKNIVDPNRRIDLAACRHLIPGYRELLQRLEELRQEPYDSDNPDHEELLLDLWKLLYPD  143 (302)
T ss_pred             cccccChhhhhhhHHHHHHhccccCCCcccchhhhhccccccCcHHHHHHHHHHHhccCCCCChhHHHHHHHHHHHhCCC
Confidence            468889999999999     999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCChhhHhhccCCCCCCCCCcccchhhhhhhHHHHHhhchHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHHh
Q 029146           77 QELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQML  156 (198)
Q Consensus        77 ~~~~~~~~~~Wk~lGFQ~~dP~tDFRg~G~LgL~~LlyF~~~~~~~~~~il~~q~~~~~~~~yPfA~asIniT~~L~~~l  156 (198)
                      ++++++++++|++|||||+||+|||||+|+|||+||+||+++||+.+++++.+|.  ++.|+||||+||||||.|++++|
T Consensus       144 ~~l~~lvs~qW~emGfQG~dPsTDFRG~GfL~LeNLlyFa~~~~~~aq~lL~~s~--~~r~eYpfAVvgINIT~m~~qmL  221 (302)
T KOG2998|consen  144 KELPGLVSKQWKEMGFQGADPSTDFRGMGFLGLENLLYFARTYPTSAQRLLLKSR--HPRWEYPFAVVGINITFMAIQML  221 (302)
T ss_pred             CccchhHHHHHHHhccCCCCCCcccccchHHHHHHHHHHHHhhhHHHHHHHHhcC--CCccCCceEEEeecHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999975  45699999999999999999999


Q ss_pred             hhhcC-CCCchhhHHHHHHhcCCCcchhhhhHHHHHHHHh
Q 029146          157 DLEAT-KPRTFVRSVFLQMLSGRSLHDIVMVKHCCIYCQF  195 (198)
Q Consensus       157 ~~~~~-k~~~~~~~~F~~lf~~~~~a~~~~~l~c~~~~~~  195 (198)
                      +.++. ++.+..+..|     ++.+||  ..|+|+.|+.|
T Consensus       222 ~~eal~~~~~~~~~~~-----~~~~~F--~~lYc~af~~~  254 (302)
T KOG2998|consen  222 DLEALKKHFNNIVKVF-----ETEPAF--DLLYCYAFLEF  254 (302)
T ss_pred             Hhhhcccccccccccc-----ccHHHH--HHHHHHHHHHH
Confidence            99988 4444444444     677887  89999999754

>PF04727 ELMO_CED12: ELMO/CED-12 family; InterPro: IPR006816 This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2

Probab=100.00  E-value=3.6e-42  Score=278.76  Aligned_cols=150  Identities=36%  Similarity=0.653  Sum_probs=131.8

Q ss_pred             HHHHHHHhhccccCCCCHHHHHHHHHHHHHhCCCcccCCCChhhHhhccCCCCCCCCCcccchhhhhhhHHHHHhhchHH
Q 029146           43 RLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELHGLISDQWKEMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTS  122 (198)
Q Consensus        43 ~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk~lGFQ~~dP~tDFRg~G~LgL~~LlyF~~~~~~~  122 (198)
                      .|+.|++++++|||++|++|+++|++||++++++.+.+++.+++|++||||++||+|||||+|+|||+||+||+++||+.
T Consensus         2 ~l~~l~~~~~~~~d~~~~~h~~~L~~Lw~~~~~~~~~~~~~~~~W~~lGFQ~~dP~tDFR~~G~LgL~~L~yf~~~~~~~   81 (170)
T PF04727_consen    2 TLNLLRALAKTPFDPENPEHEELLQELWNALFPDEPPFSRISEHWKELGFQGEDPATDFRGMGLLGLDCLLYFAENYPDE   81 (170)
T ss_pred             hHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCCccCCcCccHHHHhCCCCCCcHHHHhhhhHHHHHHHHHHHHHChHH
Confidence            57889999999999999999999999999999998888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHHhhhhcCCCCchhhHHHHHH-hcCCCcchhhhhHHHHHHHHhh
Q 029146          123 FQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQM-LSGRSLHDIVMVKHCCIYCQFY  196 (198)
Q Consensus       123 ~~~il~~q~~~~~~~~yPfA~asIniT~~L~~~l~~~~~k~~~~~~~~F~~l-f~~~~~a~~~~~l~c~~~~~~~  196 (198)
                      +++++.++.++.+..+||||+||||||.+|+++|++++.  .......+..+ +...+.+|  .++||..|.+|.
T Consensus        82 ~~~~l~~~~~~~~~~~~Pfa~~~invt~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~f--~elf~~~f~~f~  152 (170)
T PF04727_consen   82 FRRILREQSSRSDENWYPFAVASINVTSLLCELLKLGAL--DSEFYKRINFLSFFSSLEAF--EELFCACFQLFD  152 (170)
T ss_pred             HHHHHHHccCcccccccHHHHHHHHHHHHHHHHHhhccc--CHHHhhcccccccCccHHHH--HHHHHHHHHHHH
Confidence            999999998777678999999999999999999999544  33333333333 55566666  899999997774

ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family [].; GO: 0006909 phagocytosis, 0005856 cytoskeleton

>KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms]

Probab=99.91  E-value=9.6e-25  Score=201.86  Aligned_cols=159  Identities=21%  Similarity=0.358  Sum_probs=146.0

Q ss_pred             ccccCCHHHHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHhCCCcccC-----------CCChhhHhhccCCC-CCCCC
Q 029146           32 ICINLTPQQAERLRRLKHRMKVYFDASRPDHQEALRALWAATYPDQELH-----------GLISDQWKEMGWQG-KDPST   99 (198)
Q Consensus        32 ~~~~L~~~Q~~~L~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~-----------~~~~~~Wk~lGFQ~-~dP~t   99 (198)
                      ..++|+..|...++.+..|+.++.|+.+++..+.++.+.+.+|.++..+           ....+..|++||.+ .||+.
T Consensus       274 ~~~~lyvlq~L~~glle~Rm~~~md~~~q~qr~~i~~lr~iaf~~~~~~~~~g~~~e~rk~l~~~~ykklgf~n~~npa~  353 (713)
T KOG2999|consen  274 RPIQLYVLQVLTLGLLEVRMRTKMDPQDQVQRELISELRRIAFDDESEPSRRGGGAEVRKILDIESYKKLGFENRINPAQ  353 (713)
T ss_pred             chHHHHHHHHHHHhhhHHhhhcccchhhHHHHHHHHHHHhcCcccccccccCCcchhhhhhhhHHHHHhhcccccCChHH
Confidence            3469999999999999999999999999999999999999999875432           34578999999999 99999


Q ss_pred             Ccc--cchhhhhhhHHHHHhhchHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHHhhhhcCCCCchhhHHHHHHhcC
Q 029146          100 DFR--GAGFISLENLLFFAKTFSTSFQRLLRKQGGKRADWEYPFAVAGVNITFMLMQMLDLEATKPRTFVRSVFLQMLSG  177 (198)
Q Consensus       100 DFR--g~G~LgL~~LlyF~~~~~~~~~~il~~q~~~~~~~~yPfA~asIniT~~L~~~l~~~~~k~~~~~~~~F~~lf~~  177 (198)
                      ||-  ++|+|+|+||+||+++||+.|.+++.++++|.+.++|||+.++|.+|+|||++|++  +.++++..+.|.+||++
T Consensus       354 df~etppG~LAldnMvyFA~~~~~~y~riVlENSsRedkhecpfgr~sieltk~lcEilrV--ge~p~E~~~df~pmfFt  431 (713)
T KOG2999|consen  354 DFGETPPGRLALDNMVYFARNSPQDYRRIVLENSSREDKHECPFGRMSIELTKILCELLRV--GEPPDELDRDFIPMFFT  431 (713)
T ss_pred             hcccCCchHHHHHHHHHHHHhCHHHHHHHHHhcccccccCcCCcCccHHHHHHHHHHHHhc--CCCchhhcCccceeeec
Confidence            996  89999999999999999999999999999999999999999999999999999999  55788999999999999


Q ss_pred             CCcchhhhhHHHHHHHH
Q 029146          178 RSLHDIVMVKHCCIYCQ  194 (198)
Q Consensus       178 ~~~a~~~~~l~c~~~~~  194 (198)
                      +|..|  .|+|||.--|
T Consensus       432 hd~~F--ee~FciciqL  446 (713)
T KOG2999|consen  432 HDTPF--EELFCICVQL  446 (713)
T ss_pred             CCCcH--HHHHHHHHHH
Confidence            99999  8999986533

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	198
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	1e-05

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 6/34 (17%)

Query: 40 QAERLRRLKHRMKVYFDASRPDHQEALRALWAAT 73
          + + L++L+  +K+Y D S P    AL A+  AT
Sbjct: 18 EKQALKKLQASLKLYADDSAP----AL-AI-KAT 45

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00