Citrus Sinensis ID: 029253

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
Protein Sequence
MELSVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLIS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccHHHHHHHcccccEEEEEEEccccEEEEEEEEccccccccccccccHHHHHHHHHccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHcccccccccccEEccccHHHHHHHcccEEEccccc
Secondary Structure Prediction (SSPRO)
cccccccHEEccccccccHccccccccccEEEccccccccHHHccccccccccHHHHHHcccccccccHHHHHHHHHccccEEEEEEEccEEEEEEEEEccccccccccccHcHHHHHHHHHHHccccEEEEEEEccEEEcccccHHHHHHHHHHHHHHHHccccccccccEEEccHHHHHHHHEEEEEEEEEccc
Coil and Loop (DISEMBL)
MELSVPARLVHLSIsstssrrllvkpktnlsrkllpistqycsstrrmnslttpraslnpdgdskhnngsastssavdsgrigevkrvtkeTNVSVKINvdgsgvadsstcipfLDHMLDQLAShglfdvhvratgdihiddhhtnedVGLAIGTALLQALgdrkginrfgdftaplDEALIHVSLVCLFHILLIS
Flexible Loop (DISEMBL)
melsvparlvhlsisstssrrllvkpktnlsrkllpistqycsstrrmnslttpraslnpdgdskhnngsastssavdsgrigevkrvtketnvsvkinvdgsgvaDSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLIS
Low Complexity Region (SEG)
MELSVPArlvhlsisstssrrllVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLIS
Disordered region (IsUnstruct)
********************************************************************************************NVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLI*
Disordered Region (DISOPRED)
****************************NLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSS*V**GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLIS
Disordered Region (DISEMBL)
MELSVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDG******************RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLIS
Disordered Region (DISPRO)
*******RL*HLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLIS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MELSVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	196	2.2.26 [Sep-21-2011]
Q43072	281	Imidazoleglycerol-phospha	N/A	no	0.816	0.569	0.681	4e-58
O23346	272	Imidazoleglycerol-phospha	no	no	0.903	0.650	0.636	2e-56
P34047	270	Imidazoleglycerol-phospha	no	no	0.882	0.640	0.635	7e-54
P34048	195	Imidazoleglycerol-phospha	N/A	no	0.530	0.533	0.846	3e-46
A2BUR2	201	Imidazoleglycerol-phospha	yes	no	0.571	0.557	0.633	2e-38
A5GWD4	203	Imidazoleglycerol-phospha	yes	no	0.556	0.536	0.678	2e-37
A9BDS9	208	Imidazoleglycerol-phospha	yes	no	0.551	0.519	0.675	2e-37
Q3B0A6	201	Imidazoleglycerol-phospha	yes	no	0.551	0.537	0.666	2e-37
A2BP81	201	Imidazoleglycerol-phospha	yes	no	0.551	0.537	0.648	2e-37
Q46H93	203	Imidazoleglycerol-phospha	yes	no	0.551	0.532	0.685	3e-37

>sp|Q43072|HIS7_PEA Imidazoleglycerol-phosphate dehydratase OS=Pisum sativum GN=HIS3 PE=2 SV=1

 Score =  223 bits (569), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 122/179 (68%), Positives = 131/179 (73%), Gaps = 19/179 (10%)

Query: 22  LLVKPK------TNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDS-------KHNN 68
            L KPK      T    K  P    + S      +LTTP   +NP   S       +HNN
Sbjct: 17  FLFKPKITTFHTTLFPTKFAPFKASFFSPNHL--TLTTP---MNPPTTSLSSAAFVEHNN 71

Query: 69  GSASTSSAV-DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGL 127
           GS STS       R+GEVKRVTKETNVSVKIN+DGSGVADSST IPFLDHMLDQLASHGL
Sbjct: 72  GSTSTSLPFHPETRVGEVKRVTKETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASHGL 131

Query: 128 FDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           FDVHV+ATGD+HIDDHHTNEDV LAIGTALLQALGDRKGINRFGDF+APLDEALIHVSL
Sbjct: 132 FDVHVKATGDVHIDDHHTNEDVALAIGTALLQALGDRKGINRFGDFSAPLDEALIHVSL 190

Pisum sativum (taxid: 3888)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 9

>sp|O23346|HIS7B_ARATH Imidazoleglycerol-phosphate dehydratase 2 OS=Arabidopsis thaliana GN=At4g14910 PE=2 SV=2

 Score =  218 bits (555), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 143/190 (75%), Gaps = 13/190 (6%)

Query: 1   MEL--SVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASL 58
           MEL  S PA+L+  ++SS    R L+ P+T+++    P           MNS +  R S+
Sbjct: 1   MELLSSSPAQLLRPNLSS----RALLPPRTSIASSHPPPPRFLV-----MNSQSQHRPSI 51

Query: 59  NPDGDSKHNNG--SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLD 116
           +       +NG  + +T+S ++S RIGEVKR TKETNVSVKIN+DG GV+DSST IPFLD
Sbjct: 52  SCASPPPGDNGFPAITTASPIESARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLD 111

Query: 117 HMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAP 176
           HMLDQLASHGLFDVHVRATGD HIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAP
Sbjct: 112 HMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAP 171

Query: 177 LDEALIHVSL 186
           LDEALIHVSL
Sbjct: 172 LDEALIHVSL 181

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 9

>sp|P34047|HIS7A_ARATH Imidazoleglycerol-phosphate dehydratase 1 OS=Arabidopsis thaliana GN=At3g22425 PE=1 SV=1

 Score =  209 bits (533), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/192 (63%), Positives = 145/192 (75%), Gaps = 19/192 (9%)

Query: 1   MELSVPARLVHLSISSTSSRRLLVKPKTN----LSRKLLPISTQYCSSTR--RMNSLTTP 54
           MELS  + +    +S +SS   L++PK      L R+ + +S+   S  R  RM S +  
Sbjct: 1   MELSSASAI----LSHSSSAAQLLRPKLGFIDLLPRRAMIVSSPSSSLPRFLRMESQSQL 56

Query: 55  RASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPF 114
           R         +  + SAS+SS++  GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPF
Sbjct: 57  R---------QSISCSASSSSSMALGRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPF 107

Query: 115 LDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFT 174
           LDHMLDQLASHGLFDVHVRATGD+HIDDHHTNED+ LAIGTALL+ALG+RKGINRFGDFT
Sbjct: 108 LDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFT 167

Query: 175 APLDEALIHVSL 186
           APLDEALIHVSL
Sbjct: 168 APLDEALIHVSL 179

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 9

>sp|P34048|HIS7_WHEAT Imidazoleglycerol-phosphate dehydratase (Fragment) OS=Triticum aestivum PE=2 SV=1

 Score =  184 bits (468), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 88/104 (84%), Positives = 96/104 (92%)

Query: 83  GEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDD 142
           GEVKRVTKETNV VKIN+DG+GVA+SST IPFLDHMLDQLASHGLFDV+V+ATGD HIDD
Sbjct: 1   GEVKRVTKETNVHVKINLDGTGVANSSTGIPFLDHMLDQLASHGLFDVYVKATGDTHIDD 60

Query: 143 HHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           HH+NED+ LAIGTALLQALGDRKGINRFG FTAPLDEA + V L
Sbjct: 61  HHSNEDIALAIGTALLQALGDRKGINRFGHFTAPLDEAAVEVIL 104

Triticum aestivum (taxid: 4565)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 9

>sp|A2BUR2|HIS7_PROM5 Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9515) GN=hisB PE=3 SV=1

 Score =  158 bits (400), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 91/112 (81%)

Query: 77  VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATG 136
           + S R  E+KR T ET++S+ IN+DG+G+++  T IPFLDHML Q++SHGLFD+ +RA G
Sbjct: 1   MSSSRQAEIKRKTNETDISIFINIDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIG 60

Query: 137 DIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVC 188
           D HIDDHHTNEDVG+A+G A  +ALG+RKGINRFG F APLDEAL+ V+L C
Sbjct: 61  DTHIDDHHTNEDVGIALGKAFTKALGERKGINRFGHFFAPLDEALVQVTLDC 112

Prochlorococcus marinus (strain MIT 9515) (taxid: 167542)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 9

>sp|A5GWD4|HIS7_SYNR3 Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain RCC307) GN=hisB PE=3 SV=1

 Score =  155 bits (392), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 86/109 (78%)

Query: 80  GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIH 139
           GR G + RVT ET V V I +DGSG  + ST +PFLDHML QLASHGLFD+ + ATGD H
Sbjct: 2   GRQGNIHRVTGETEVRVAIGLDGSGQCEVSTGVPFLDHMLHQLASHGLFDLTISATGDTH 61

Query: 140 IDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVC 188
           IDDHHTNEDVG+A+G AL QAL DR+GI+RFG F APLDEAL+ V+L C
Sbjct: 62  IDDHHTNEDVGIALGQALGQALADRRGIHRFGHFVAPLDEALVQVALDC 110

Synechococcus sp. (strain RCC307) (taxid: 316278)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 9

>sp|A9BDS9|HIS7_PROM4 Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9211) GN=hisB PE=3 SV=1

 Score =  155 bits (391), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 73/108 (67%), Positives = 87/108 (80%)

Query: 81  RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
           R GEV RVTKETNV+V++ +DG G    ST + FLDHML QL+SHGLFD+ V A GD HI
Sbjct: 5   RTGEVHRVTKETNVTVRLGLDGKGKCKISTGVAFLDHMLQQLSSHGLFDLEVIAKGDTHI 64

Query: 141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVC 188
           DDHHTNEDVG+AIG AL ++LG+R+GINRFG F+APLDEAL+ V L C
Sbjct: 65  DDHHTNEDVGIAIGQALSESLGERQGINRFGHFSAPLDEALVQVVLDC 112

Prochlorococcus marinus (strain MIT 9211) (taxid: 93059)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 9

>sp|Q3B0A6|HIS7_SYNS9 Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain CC9902) GN=hisB PE=3 SV=1

 Score =  155 bits (391), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 72/108 (66%), Positives = 89/108 (82%)

Query: 81  RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
           R GEV R T ET+V VK+++DGSG  ++ST +PFLDHML+Q++SHGL D+ + A GD HI
Sbjct: 2   RTGEVHRHTGETDVKVKLDLDGSGCCEASTGVPFLDHMLNQISSHGLIDLTITAVGDTHI 61

Query: 141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVC 188
           DDHHTNEDVG+A+G AL QALGDRKGI+RFG F APLDEAL+ V+L C
Sbjct: 62  DDHHTNEDVGIAVGQALSQALGDRKGIHRFGHFVAPLDEALVQVALDC 109

Synechococcus sp. (strain CC9902) (taxid: 316279)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 9

>sp|A2BP81|HIS7_PROMS Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain AS9601) GN=hisB PE=3 SV=1

 Score =  155 bits (391), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 70/108 (64%), Positives = 89/108 (82%)

Query: 81  RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
           R  E+KR T ET++SV IN+DGSG+++  T IPFLDHML Q++SHGLFD+ ++A GD HI
Sbjct: 5   RQSEIKRKTNETDISVFINLDGSGISEIDTGIPFLDHMLHQISSHGLFDLQIKAIGDTHI 64

Query: 141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVC 188
           DDHHTNEDVG+A+G A  +ALG+RKGI+RFG F APLDEAL+ V+L C
Sbjct: 65  DDHHTNEDVGIALGKAFSKALGERKGISRFGHFFAPLDEALVQVTLDC 112

Prochlorococcus marinus (strain AS9601) (taxid: 146891)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 9

>sp|Q46H93|HIS7_PROMT Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain NATL2A) GN=hisB PE=3 SV=1

 Score =  154 bits (389), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/108 (68%), Positives = 87/108 (80%)

Query: 81  RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
           R GE++R TKET+V VKI++DGSG   ++T I FLDHM+ QL+SHGLFD+ VRA GD HI
Sbjct: 5   REGEIRRETKETDVFVKIDLDGSGKCSANTGIGFLDHMIQQLSSHGLFDIEVRANGDTHI 64

Query: 141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVC 188
           DDHHTNEDVG+AIG AL +ALGDR GI RFG F APLDEALI V + C
Sbjct: 65  DDHHTNEDVGIAIGQALSKALGDRVGIKRFGHFLAPLDEALIQVVVDC 112

Prochlorococcus marinus (strain NATL2A) (taxid: 59920)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
2495230	281	RecName: Full=Imidazoleglycerol-phosphat	0.816	0.569	0.681	2e-56
297800716	271	hypothetical protein ARALYDRAFT_915339 [	0.897	0.649	0.636	3e-56
145333097	308	Imidazoleglycerol-phosphate dehydratase	0.903	0.574	0.636	9e-55
18414338	272	Imidazoleglycerol-phosphate dehydratase	0.903	0.650	0.636	1e-54
334186541	282	Imidazoleglycerol-phosphate dehydratase	0.903	0.627	0.636	1e-54
388518005	278	unknown [Lotus japonicus]	0.612	0.431	0.892	3e-54
88192813	207	Chain A, X-Ray Structure Of Imidazolegly	0.591	0.560	0.879	5e-53
3982576	274	imidazoleglycerol phosphate dehydratase	0.913	0.653	0.646	7e-53
358248592	278	uncharacterized protein LOC100804707 [Gl	0.612	0.431	0.859	3e-52
2244848	259	imidazoleglycerol-phosphate dehydratase	0.846	0.640	0.627	3e-52

>gi|2495230|sp|Q43072.1|HIS7_PEA RecName: Full=Imidazoleglycerol-phosphate dehydratase; Short=IGPD gi|1381086|gb|AAB67738.1| imidazoleglycerol-phosphate dehydratase [Pisum sativum]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/179 (68%), Positives = 131/179 (73%), Gaps = 19/179 (10%)

Query: 22  LLVKPK------TNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDS-------KHNN 68
            L KPK      T    K  P    + S      +LTTP   +NP   S       +HNN
Sbjct: 17  FLFKPKITTFHTTLFPTKFAPFKASFFSPNHL--TLTTP---MNPPTTSLSSAAFVEHNN 71

Query: 69  GSASTSSAV-DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGL 127
           GS STS       R+GEVKRVTKETNVSVKIN+DGSGVADSST IPFLDHMLDQLASHGL
Sbjct: 72  GSTSTSLPFHPETRVGEVKRVTKETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASHGL 131

Query: 128 FDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           FDVHV+ATGD+HIDDHHTNEDV LAIGTALLQALGDRKGINRFGDF+APLDEALIHVSL
Sbjct: 132 FDVHVKATGDVHIDDHHTNEDVALAIGTALLQALGDRKGINRFGDFSAPLDEALIHVSL 190

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800716|ref|XP_002868242.1| hypothetical protein ARALYDRAFT_915339 [Arabidopsis lyrata subsp. lyrata] gi|297314078|gb|EFH44501.1| hypothetical protein ARALYDRAFT_915339 [Arabidopsis lyrata subsp. lyrata]

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 148/190 (77%), Gaps = 14/190 (7%)

Query: 1   MEL--SVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASL 58
           MEL  S PA+L+  ++SS    R+L+ P+T+++    P   ++     RM+S +  R S+
Sbjct: 1   MELLSSSPAQLLRPNLSS----RVLLPPRTSIAS--YPFPPRFL----RMDSQSQHRQSI 50

Query: 59  NPDGDSKHNNG--SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLD 116
           +        NG  + +T+S ++S RIGEVKR TKETNVSVK+N+DG+GV+DSST IPFLD
Sbjct: 51  SCASSPPGGNGFPAITTASPIESARIGEVKRETKETNVSVKLNLDGNGVSDSSTGIPFLD 110

Query: 117 HMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAP 176
           HMLDQLASHGLFDVHVRATGDIHIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAP
Sbjct: 111 HMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAP 170

Query: 177 LDEALIHVSL 186
           LDEALIHVSL
Sbjct: 171 LDEALIHVSL 180

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145333097|ref|NP_001078391.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana] gi|332658121|gb|AEE83521.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana]

 Score =  218 bits (556), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 143/190 (75%), Gaps = 13/190 (6%)

Query: 1   MEL--SVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASL 58
           MEL  S PA+L+  ++SS    R L+ P+T+++    P           MNS +  R S+
Sbjct: 1   MELLSSSPAQLLRPNLSS----RALLPPRTSIASSHPPPPRFLV-----MNSQSQHRPSI 51

Query: 59  NPDGDSKHNNG--SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLD 116
           +       +NG  + +T+S ++S RIGEVKR TKETNVSVKIN+DG GV+DSST IPFLD
Sbjct: 52  SCASPPPGDNGFPAITTASPIESARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLD 111

Query: 117 HMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAP 176
           HMLDQLASHGLFDVHVRATGD HIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAP
Sbjct: 112 HMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAP 171

Query: 177 LDEALIHVSL 186
           LDEALIHVSL
Sbjct: 172 LDEALIHVSL 181

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414338|ref|NP_567448.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana] gi|259016248|sp|O23346.2|HIS7B_ARATH RecName: Full=Imidazoleglycerol-phosphate dehydratase 2; Short=IGPD 2 gi|15081690|gb|AAK82500.1| AT4g14910/dl3495c [Arabidopsis thaliana] gi|20334842|gb|AAM16177.1| AT4g14910/dl3495c [Arabidopsis thaliana] gi|332658120|gb|AEE83520.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana]

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 143/190 (75%), Gaps = 13/190 (6%)

Query: 1   MEL--SVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASL 58
           MEL  S PA+L+  ++SS    R L+ P+T+++    P           MNS +  R S+
Sbjct: 1   MELLSSSPAQLLRPNLSS----RALLPPRTSIASSHPPPPRFLV-----MNSQSQHRPSI 51

Query: 59  NPDGDSKHNNG--SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLD 116
           +       +NG  + +T+S ++S RIGEVKR TKETNVSVKIN+DG GV+DSST IPFLD
Sbjct: 52  SCASPPPGDNGFPAITTASPIESARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLD 111

Query: 117 HMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAP 176
           HMLDQLASHGLFDVHVRATGD HIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAP
Sbjct: 112 HMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAP 171

Query: 177 LDEALIHVSL 186
           LDEALIHVSL
Sbjct: 172 LDEALIHVSL 181

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334186541|ref|NP_001190734.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana] gi|332658122|gb|AEE83522.1| Imidazoleglycerol-phosphate dehydratase 2 [Arabidopsis thaliana]

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/190 (63%), Positives = 143/190 (75%), Gaps = 13/190 (6%)

Query: 1   MEL--SVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASL 58
           MEL  S PA+L+  ++SS    R L+ P+T+++    P           MNS +  R S+
Sbjct: 1   MELLSSSPAQLLRPNLSS----RALLPPRTSIASSHPPPPRFLV-----MNSQSQHRPSI 51

Query: 59  NPDGDSKHNNG--SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLD 116
           +       +NG  + +T+S ++S RIGEVKR TKETNVSVKIN+DG GV+DSST IPFLD
Sbjct: 52  SCASPPPGDNGFPAITTASPIESARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLD 111

Query: 117 HMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAP 176
           HMLDQLASHGLFDVHVRATGD HIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAP
Sbjct: 112 HMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAP 171

Query: 177 LDEALIHVSL 186
           LDEALIHVSL
Sbjct: 172 LDEALIHVSL 181

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388518005|gb|AFK47064.1| unknown [Lotus japonicus]

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 108/121 (89%), Positives = 114/121 (94%), Gaps = 1/121 (0%)

Query: 67  NNGSASTSSAVDSG-RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASH 125
           NN SA+T+  VDSG RIGEVKRVT ETNVSVKIN+DGSGVADSST IPFLDHMLDQLASH
Sbjct: 67  NNSSATTALPVDSGARIGEVKRVTNETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASH 126

Query: 126 GLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVS 185
           GLFDVHV+ATGDIHIDDHHTNEDV LAIGTALLQALGDRKGINRFG+F+APLDEALIHVS
Sbjct: 127 GLFDVHVKATGDIHIDDHHTNEDVALAIGTALLQALGDRKGINRFGNFSAPLDEALIHVS 186

Query: 186 L 186
           L
Sbjct: 187 L 187

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|88192813|pdb|2F1D|A Chain A, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192814|pdb|2F1D|B Chain B, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192815|pdb|2F1D|C Chain C, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192816|pdb|2F1D|D Chain D, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192817|pdb|2F1D|E Chain E, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192818|pdb|2F1D|F Chain F, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192819|pdb|2F1D|G Chain G, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192820|pdb|2F1D|H Chain H, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192821|pdb|2F1D|I Chain I, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192822|pdb|2F1D|J Chain J, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192823|pdb|2F1D|K Chain K, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192824|pdb|2F1D|L Chain L, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192825|pdb|2F1D|M Chain M, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192826|pdb|2F1D|N Chain N, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192827|pdb|2F1D|O Chain O, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase gi|88192828|pdb|2F1D|P Chain P, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase

 Score =  212 bits (540), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 102/116 (87%), Positives = 112/116 (96%)

Query: 71  ASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDV 130
           AS+SS++  GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPFLDHMLDQLASHGLFDV
Sbjct: 1   ASSSSSMALGRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDV 60

Query: 131 HVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           HVRATGD+HIDDHHTNED+ LAIGTALL+ALG+RKGINRFGDFTAPLDEALIHVSL
Sbjct: 61  HVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSL 116

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3982576|gb|AAC83458.1| imidazoleglycerol phosphate dehydratase [Thlaspi goesingense]

 Score =  212 bits (539), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/184 (64%), Positives = 133/184 (72%), Gaps = 5/184 (2%)

Query: 5   VPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTR--RMNSLTTPRASLNPDG 62
            PA   H   SS+SS +LL        R+   I++    S R  RM S +    S++   
Sbjct: 3   APAIFRH---SSSSSAQLLRPAALGSIRQRTSIASSVTPSLRFLRMASQSQHHESVSCAS 59

Query: 63  DSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQL 122
               N   A  S  ++S RIGEVKR TKETNVSVKIN+DG+GVADSST IPFLDHMLDQL
Sbjct: 60  VPGDNGFPAIISPPIESARIGEVKRETKETNVSVKINLDGNGVADSSTGIPFLDHMLDQL 119

Query: 123 ASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALI 182
           ASHGLFDVHVRATGD HIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAPLDEALI
Sbjct: 120 ASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALI 179

Query: 183 HVSL 186
           HVSL
Sbjct: 180 HVSL 183

Source: Thlaspi goesingense

Species: Thlaspi goesingense

Genus: Thlaspi

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248592|ref|NP_001240163.1| uncharacterized protein LOC100804707 [Glycine max] gi|255636091|gb|ACU18390.1| unknown [Glycine max]

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 104/121 (85%), Positives = 112/121 (92%), Gaps = 1/121 (0%)

Query: 67  NNGSASTSSAVDS-GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASH 125
           +N SA+T+  +DS  RIGEVKRVTKETNVSVKIN+DGSGVADSST IPFLDHMLDQLASH
Sbjct: 67  DNASATTTLPIDSDARIGEVKRVTKETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASH 126

Query: 126 GLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVS 185
           GL DVHV+ATGDIHIDDHHTNEDV LAIGTALL ALGDRKGINRFG+F+APLDEALIHVS
Sbjct: 127 GLLDVHVKATGDIHIDDHHTNEDVALAIGTALLHALGDRKGINRFGNFSAPLDEALIHVS 186

Query: 186 L 186
           L
Sbjct: 187 L 187

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2244848|emb|CAB10270.1| imidazoleglycerol-phosphate dehydratase [Arabidopsis thaliana] gi|7268237|emb|CAB78533.1| imidazoleglycerol-phosphate dehydratase [Arabidopsis thaliana]

 Score =  209 bits (533), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/188 (62%), Positives = 136/188 (72%), Gaps = 22/188 (11%)

Query: 1   MEL--SVPARLVHLSISSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASL 58
           MEL  S PA+L+  ++SS    R L+ P+T+++    P           MNS +  R S+
Sbjct: 1   MELLSSSPAQLLRPNLSS----RALLPPRTSIASSHPPPPRFLV-----MNSQSQHRPSI 51

Query: 59  NPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHM 118
                      S ++    D+ RIGEVKR TKETNVSVKIN+DG GV+DSST IPFLDHM
Sbjct: 52  -----------SCASPPPGDNARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHM 100

Query: 119 LDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLD 178
           LDQLASHGLFDVHVRATGD HIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAPLD
Sbjct: 101 LDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLD 160

Query: 179 EALIHVSL 186
           EALIHVSL
Sbjct: 161 EALIHVSL 168

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	196
TAIR|locus:2129500	308	HISN5B "HISTIDINE BIOSYNTHESIS	0.816	0.519	0.698	4.4e-52
TAIR|locus:1005716545	270	IGPD "imidazoleglycerol-phosph	0.596	0.433	0.880	2.4e-51
TIGR_CMR|GSU_3098	195	GSU_3098 "imidazoleglycerol-ph	0.540	0.543	0.537	1e-27
TIGR_CMR|SPO_1163	195	SPO_1163 "imidazoleglycerol-ph	0.540	0.543	0.518	1.9e-26
UNIPROTKB|P64368	210	hisB "Imidazoleglycerol-phosph	0.586	0.547	0.460	6.6e-26
UNIPROTKB|Q9KSX1	357	hisB "Histidine biosynthesis b	0.535	0.294	0.518	6.6e-26
TIGR_CMR|VC_1135	357	VC_1135 "imidazoleglycerol-pho	0.535	0.294	0.518	6.6e-26
TIGR_CMR|CPS_3892	361	CPS_3892 "imidazoleglycerol-ph	0.520	0.282	0.504	1.2e-24
TIGR_CMR|SO_2071	363	SO_2071 "imidazoleglycerol-pho	0.561	0.303	0.495	2.6e-24
TIGR_CMR|DET_0842	196	DET_0842 "imidazoleglycerol-ph	0.525	0.525	0.509	2.9e-23

TAIR|locus:2129500 HISN5B "HISTIDINE BIOSYNTHESIS 5B" [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 118/169 (69%), Positives = 132/169 (78%)

Query:    27 KTNLS-RKLLPISTQYCSS---TRR---MNSLTTPRASLNPDGDSKHNNG--SASTSSAV 77
             + NLS R LLP  T   SS     R   MNS +  R S++       +NG  + +T+S +
Sbjct:    13 RPNLSSRALLPPRTSIASSHPPPPRFLVMNSQSQHRPSISCASPPPGDNGFPAITTASPI 72

Query:    78 DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGD 137
             +S RIGEVKR TKETNVSVKIN+DG GV+DSST IPFLDHMLDQLASHGLFDVHVRATGD
Sbjct:    73 ESARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGD 132

Query:   138 IHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
              HIDDHHTNEDV LAIGTALL+ALG+RKGINRFGDFTAPLDEALIHVSL
Sbjct:   133 THIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSL 181

GO:0000105 "histidine biosynthetic process" evidence=IEA;IGI;ISS

GO:0004424 "imidazoleglycerol-phosphate dehydratase activity" evidence=IEA;IGI;ISS

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:1005716545 IGPD "imidazoleglycerol-phosphate dehydratase" [Arabidopsis thaliana (taxid:3702)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 103/117 (88%), Positives = 113/117 (96%)

Query:    70 SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFD 129
             SAS+SS++  GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPFLDHMLDQLASHGLFD
Sbjct:    63 SASSSSSMALGRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFD 122

Query:   130 VHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
             VHVRATGD+HIDDHHTNED+ LAIGTALL+ALG+RKGINRFGDFTAPLDEALIHVSL
Sbjct:   123 VHVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSL 179

GO:0000105 "histidine biosynthetic process" evidence=IEA;ISS;IDA;IMP

GO:0004424 "imidazoleglycerol-phosphate dehydratase activity" evidence=IEA;ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

TIGR_CMR|GSU_3098 GSU_3098 "imidazoleglycerol-phosphate dehydratase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 57/106 (53%), Positives = 76/106 (71%)

Query:    81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
             R   ++RVTKET + + + +DG+G A   T +PFLDHMLD  A HGLF++ V ATGDI I
Sbjct:     3 RKATIERVTKETQIKLSLEIDGTGEAKICTSVPFLDHMLDLFARHGLFNLQVDATGDIDI 62

Query:   141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
             D HHT ED+G+ +G AL +ALGD+KGI R+G  T P+DE L  V++
Sbjct:    63 DFHHTVEDIGIVLGQALKEALGDKKGIRRYGQATVPMDETLASVAV 108

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004424 "imidazoleglycerol-phosphate dehydratase activity" evidence=ISS

TIGR_CMR|SPO_1163 SPO_1163 "imidazoleglycerol-phosphate dehydratase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 55/106 (51%), Positives = 73/106 (68%)

Query:    81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
             R   + R T ET +SV IN+DG+G  D+ T + F DHMLDQLA H L D+ + A GD HI
Sbjct:     2 RRASISRQTAETEISVDINLDGTGAYDNQTGVGFFDHMLDQLARHSLIDMTISAKGDYHI 61

Query:   141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
             DDHHT ED G+A+G AL  ALGD++GI R+G+   P+D+A +  +L
Sbjct:    62 DDHHTVEDTGIALGQALSAALGDKRGIRRYGECHLPMDDAQVRCAL 107

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004424 "imidazoleglycerol-phosphate dehydratase activity" evidence=ISS

UNIPROTKB|P64368 hisB "Imidazoleglycerol-phosphate dehydratase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 53/115 (46%), Positives = 79/115 (68%)

Query:    72 STSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVH 131
             +T+    + R   ++R T+E+++ +++++DG+G     T +PF DHML  L SH  FD+ 
Sbjct:     2 TTTQTAKASRRARIERRTRESDIVIELDLDGTGQVAVDTGVPFYDHMLTALGSHASFDLT 61

Query:   132 VRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
             VRATGD+ I+ HHT ED  +A+GTAL QALGD++GI RFGD   P+DE L H ++
Sbjct:    62 VRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAV 116

GO:0040007 "growth" evidence=IMP

UNIPROTKB|Q9KSX1 hisB "Histidine biosynthesis bifunctional protein HisB" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 55/106 (51%), Positives = 75/106 (70%)

Query:    81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
             R+ +V R TKET++ V +N+D +G     T + F DHMLDQ+A+HG F + ++  GD+HI
Sbjct:   169 RVAQVVRKTKETDIQVLVNLDQTGGNQIETGLGFFDHMLDQIATHGGFQLQLKVVGDLHI 228

Query:   141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
             DDHHT ED  LA+G AL +ALGD++GI RFG FT P+DE L   +L
Sbjct:   229 DDHHTVEDTALALGQALREALGDKRGIGRFG-FTLPMDECLAQCAL 273

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004401 "histidinol-phosphatase activity" evidence=ISS

GO:0004424 "imidazoleglycerol-phosphate dehydratase activity" evidence=ISS

TIGR_CMR|VC_1135 VC_1135 "imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 55/106 (51%), Positives = 75/106 (70%)

Query:    81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
             R+ +V R TKET++ V +N+D +G     T + F DHMLDQ+A+HG F + ++  GD+HI
Sbjct:   169 RVAQVVRKTKETDIQVLVNLDQTGGNQIETGLGFFDHMLDQIATHGGFQLQLKVVGDLHI 228

Query:   141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
             DDHHT ED  LA+G AL +ALGD++GI RFG FT P+DE L   +L
Sbjct:   229 DDHHTVEDTALALGQALREALGDKRGIGRFG-FTLPMDECLAQCAL 273

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004401 "histidinol-phosphatase activity" evidence=ISS

GO:0004424 "imidazoleglycerol-phosphate dehydratase activity" evidence=ISS

TIGR_CMR|CPS_3892 CPS_3892 "imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 52/103 (50%), Positives = 74/103 (71%)

Query:    77 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATG 136
             ++  RI  V R TKET+++V +N+D +G +   T + F DHMLDQ+++HG F +    +G
Sbjct:   169 LEQPRIATVTRTTKETDITVTVNLDKAGESSIDTGLGFFDHMLDQISTHGGFSLQCHVSG 228

Query:   137 DIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDE 179
             D HID+HH+ ED  LA+G AL QALG+++GINRFG FT P+DE
Sbjct:   229 DYHIDEHHSVEDTALALGQALKQALGNKRGINRFG-FTIPMDE 270

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004401 "histidinol-phosphatase activity" evidence=ISS

GO:0004424 "imidazoleglycerol-phosphate dehydratase activity" evidence=ISS

TIGR_CMR|SO_2071 SO_2071 "imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 55/111 (49%), Positives = 75/111 (67%)

Query:    70 SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFD 129
             +A   + ++ GR   V R TKET++ V +++D +     +T I F DHMLDQ+A+HG F 
Sbjct:   164 NAIADALLNKGRSATVVRTTKETDIRVTVDLDNASKGTINTGIGFFDHMLDQIATHGNFK 223

Query:   130 VHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEA 180
             + V   GD+ IDDHH+ ED  LAIG AL QALGD++GI RFG F+ P+DEA
Sbjct:   224 MEVNVDGDLEIDDHHSVEDTALAIGDALRQALGDKRGIARFG-FSLPMDEA 273

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004401 "histidinol-phosphatase activity" evidence=ISS

GO:0004424 "imidazoleglycerol-phosphate dehydratase activity" evidence=ISS

TIGR_CMR|DET_0842 DET_0842 "imidazoleglycerol-phosphate dehydratase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 54/106 (50%), Positives = 70/106 (66%)

Query:    81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
             R   +KR T ET +S+ +N+DGSG A+  T +   DHML QLA HGLFD++V A GD   
Sbjct:     4 RTASIKRQTTETTISLSLNLDGSGQAEMCTGVRLFDHMLSQLAKHGLFDINVSANGD--- 60

Query:   141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
             D HH  EDV L +G A  +ALG+RKGI R  D T P+D++L  V+L
Sbjct:    61 DIHHLVEDVALTLGKAFNEALGERKGIVRMADATVPMDDSLATVAL 106

GO:0000105 "histidine biosynthetic process" evidence=ISS

GO:0004424 "imidazoleglycerol-phosphate dehydratase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.2.1.19	0.914
3rd Layer	4.2.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	scaffold_703081.1	annotation not avaliable (271 aa)
		(Arabidopsis lyrata)
Predicted Functional Partners:
	Al_scaffold_0008_2924	annotation not avaliable (469 aa)	•	•	•	•		•	•		0.986
	fgenesh2_kg.2__1449__AT5G10330.1	GD1 protein (417 aa)	•		•	•		•	•		0.968
	scaffold_103537.1	annotation not avaliable (281 aa)	•		•	•			•		0.966
	fgenesh2_kg.7__1544__AT4G26900.1	annotation not avaliable (592 aa)	•		•	•		•	•		0.960
	scaffold_200746.1	annotation not avaliable (408 aa)	•		•				•		0.824
	scaffold_200748.1	annotation not avaliable (402 aa)	•		•				•		0.746
	fgenesh2_kg.1__1035__AT1G09795.1	annotation not avaliable (410 aa)	•		•				•		0.712
	scaffold_402235.1	annotation not avaliable (305 aa)	•						•		0.606
	scaffold_601857.1	annotation not avaliable (444 aa)	•						•		0.581
	fgenesh2_kg.6__1057__AT5G10920.1	annotation not avaliable (518 aa)			•				•		0.518

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	196
PLN02800	261	PLN02800, PLN02800, imidazoleglycerol-phosphate de	7e-71
PRK00951	195	PRK00951, hisB, imidazoleglycerol-phosphate dehydr	4e-63
cd07914	190	cd07914, IGPD, Imidazoleglycerol-phosphate dehydra	1e-59
COG0131	195	COG0131, HisB, Imidazoleglycerol-phosphate dehydra	2e-56
PRK05446	354	PRK05446, PRK05446, imidazole glycerol-phosphate d	5e-50
pfam00475	145	pfam00475, IGPD, Imidazoleglycerol-phosphate dehyd	4e-44
PRK13598	193	PRK13598, hisB, imidazoleglycerol-phosphate dehydr	4e-24

>gnl|CDD|215430 PLN02800, PLN02800, imidazoleglycerol-phosphate dehydratase

 Score =  215 bits (549), Expect = 7e-71
 Identities = 113/172 (65%), Positives = 127/172 (73%), Gaps = 5/172 (2%)

Query: 15  SSTSSRRLLVKPKTNLSRKLLPISTQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTS 74
           S++SS   L++PK +    LLP      SS            S      S     +AS+S
Sbjct: 4   SASSSAAQLLRPKLS-FIDLLPRRAAIVSSPSSSLPRFLRMESQLRQSIS----CAASSS 58

Query: 75  SAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRA 134
           S+   GRIGEVKRVTKETNVSVKIN+DG+GVADSST IPFLDHMLDQLASHGLFDVHV+A
Sbjct: 59  SSNALGRIGEVKRVTKETNVSVKINLDGTGVADSSTGIPFLDHMLDQLASHGLFDVHVKA 118

Query: 135 TGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           TGD+ IDDHHTNEDV LAIGTALL+ALGDRKGINRFGDF+APLDEALI V L
Sbjct: 119 TGDLWIDDHHTNEDVALAIGTALLKALGDRKGINRFGDFSAPLDEALIEVVL 170

Length = 261

>gnl|CDD|234873 PRK00951, hisB, imidazoleglycerol-phosphate dehydratase; Validated

 Score =  193 bits (493), Expect = 4e-63
 Identities = 63/106 (59%), Positives = 83/106 (78%)

Query: 81  RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
           R  EV+R TKET++SV++N+DG+G +D  T + FLDHMLDQ A HGLFD+ V+A GD+HI
Sbjct: 3   RTAEVERKTKETDISVELNLDGTGKSDIDTGVGFLDHMLDQFARHGLFDLTVKAKGDLHI 62

Query: 141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           DDHHT EDVG+ +G AL +ALGD+KGI R+G    P+DEAL  V++
Sbjct: 63  DDHHTVEDVGIVLGQALKEALGDKKGIRRYGHAYVPMDEALARVAV 108

Length = 195

>gnl|CDD|153419 cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase

 Score =  184 bits (470), Expect = 1e-59
 Identities = 54/104 (51%), Positives = 75/104 (72%)

Query: 83  GEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDD 142
            E++R TKET++ V++N+DG+G +   T I F DHML   A HG FD+ V+A GD+ +DD
Sbjct: 1   AEIERKTKETDIEVELNLDGTGKSKIDTGIGFFDHMLTLFARHGGFDLTVKAKGDLEVDD 60

Query: 143 HHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           HHT EDVG+ +G AL +ALGD+KGI R+G    P+DEAL  V++
Sbjct: 61  HHTVEDVGIVLGQALKKALGDKKGIRRYGSALVPMDEALARVAV 104

Imidazoleglycerol-phosphate dehydratase (IGPD; EC 4.2.1.19) catalyzes the dehydration of imidazole glycerol phosphate to imidazole acetol phosphate, the sixth step of histidine biosynthesis in plants and microorganisms where the histidine is synthesized de novo. There is an internal repeat in the protein domain that is related by pseudo-dyad symmetry, perhaps as a result of an ancient gene duplication. The apo-form of IGPD exists as a catalytically inactive trimer which, in the presence of specific divalent metal cations such as manganese (Mn2+), cobalt (Co2+), cadmium (Cd2+), nickel (Ni2+), iron (Fe2+) and zinc (Zn2+), assembles to form a biologically active high molecular weight metalloenzyme; a 24-mer with 4-3-2 symmetry. Each 24-mer has 24 active sites, and contains around 1.5 metal ions per monomer, each monomer contributing residues to three separate active sites. IGPD enzymes are monofunctional in fungi, plants, archaea and some eubacteria while they are encoded as bifunctional enzymes in other eubacteria, such that the enzyme is fused to histidinol-phosphate phosphatase, the penultimate enzyme of the histidine biosynthesis pathway. The histidine biosynthesis pathway is a potential target for development of herbicides, and IGPD is a target for the triazole phosphonate herbicides. Length = 190

>gnl|CDD|223209 COG0131, HisB, Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]

 Score =  176 bits (449), Expect = 2e-56
 Identities = 59/106 (55%), Positives = 77/106 (72%)

Query: 81  RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
           R  EV R TKET++ V +++DG+G +   T + F DHMLDQLA HG FD+ V A GD+HI
Sbjct: 4   RTAEVTRKTKETDIEVSLDLDGTGKSKIDTGVGFFDHMLDQLARHGGFDLEVSAKGDLHI 63

Query: 141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           DDHHT ED G+A+G AL +ALGD++GI RFG    P+DEAL  V++
Sbjct: 64  DDHHTVEDTGIALGQALKEALGDKRGIRRFGSAYVPMDEALARVAV 109

Length = 195

>gnl|CDD|235471 PRK05446, PRK05446, imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

 Score =  164 bits (419), Expect = 5e-50
 Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 1/109 (0%)

Query: 78  DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGD 137
              R   V R TKET++ V++ +D  G +  +T I F DHMLDQ+A+HG F + ++  GD
Sbjct: 163 KRDRYAHVVRNTKETDIDVEVWLDREGKSKINTGIGFFDHMLDQIATHGGFRLEIKVKGD 222

Query: 138 IHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           +HIDDHHT ED  LA+G AL QALGD++GI RFG F  P+DE L   +L
Sbjct: 223 LHIDDHHTVEDTALALGEALKQALGDKRGIGRFG-FVLPMDECLARCAL 270

Length = 354

>gnl|CDD|189563 pfam00475, IGPD, Imidazoleglycerol-phosphate dehydratase

 Score =  143 bits (363), Expect = 4e-44
 Identities = 48/77 (62%), Positives = 58/77 (75%)

Query: 110 TCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINR 169
           T I F DHML+Q A HG FD+ V+A GD+ IDDHHT EDVG+ +G AL QALGD+KGI R
Sbjct: 1   TGIGFFDHMLEQFAKHGGFDLTVKAKGDLEIDDHHTVEDVGIVLGQALKQALGDKKGIRR 60

Query: 170 FGDFTAPLDEALIHVSL 186
           FG  T P+DEAL  V++
Sbjct: 61  FGSATVPMDEALAEVAV 77

Length = 145

>gnl|CDD|184171 PRK13598, hisB, imidazoleglycerol-phosphate dehydratase; Provisional

 Score = 93.7 bits (233), Expect = 4e-24
 Identities = 45/106 (42%), Positives = 63/106 (59%)

Query: 81  RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHI 140
           R   + R TKET + V +++D  G    ST +PF +HML  L ++      V AT  +  
Sbjct: 3   RNANITRETKETKIEVFLDIDRKGEIKVSTPVPFFNHMLITLLTYMNSTATVSATDKLPY 62

Query: 141 DDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           DDHH  EDV + +G A+ +ALGD++GI RF     P+DEAL+ VSL
Sbjct: 63  DDHHIVEDVAITLGLAIKEALGDKRGIKRFSHQIIPMDEALVLVSL 108

Length = 193

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	196
PLN02800	261	imidazoleglycerol-phosphate dehydratase	100.0
COG0131	195	HisB Imidazoleglycerol-phosphate dehydratase [Amin	100.0
PRK13598	193	hisB imidazoleglycerol-phosphate dehydratase; Prov	100.0
PRK00951	195	hisB imidazoleglycerol-phosphate dehydratase; Vali	100.0
cd07914	190	IGPD Imidazoleglycerol-phosphate dehydratase. Imid	100.0
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	100.0
PF00475	145	IGPD: Imidazoleglycerol-phosphate dehydratase; Int	100.0
KOG3143	219	consensus Imidazoleglycerol-phosphate dehydratase	100.0
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	97.61
PLN02800	261	imidazoleglycerol-phosphate dehydratase	97.57
PRK13598	193	hisB imidazoleglycerol-phosphate dehydratase; Prov	97.53
cd07914	190	IGPD Imidazoleglycerol-phosphate dehydratase. Imid	97.51
PRK00951	195	hisB imidazoleglycerol-phosphate dehydratase; Vali	97.4
PF00475	145	IGPD: Imidazoleglycerol-phosphate dehydratase; Int	97.39
COG0131	195	HisB Imidazoleglycerol-phosphate dehydratase [Amin	96.92
KOG3143	219	consensus Imidazoleglycerol-phosphate dehydratase	89.77

>PLN02800 imidazoleglycerol-phosphate dehydratase

Probab=100.00  E-value=2.7e-61  Score=421.23  Aligned_cols=160  Identities=71%  Similarity=0.957  Sum_probs=141.3

Q ss_pred             eecccccccccccccchhhccch-------hhhcccccCCccCCCCCCCCCCCCCcccCCCCCCCceEEEEeeeCCeEEE
Q 029253           23 LVKPKTNLSRKLLPISTQYCSST-------RRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVS   95 (196)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~a~i~R~TkET~I~   95 (196)
                      ++||+++ ++.+.|.++.+.++.       ++++.  +++++++|++         ..+++...+|+++++|+||||+|+
T Consensus        12 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~R~a~v~R~TkET~I~   79 (261)
T PLN02800         12 LLRPKLS-FIDLLPRRAAIVSSPSSSLPRFLRMES--QLRQSISCAA---------SSSSSNALGRIGEVKRVTKETNVS   79 (261)
T ss_pred             hcCCCcc-ccccccccccccccccccccccccccc--ccCCCccccc---------ccCCCCccceeEEEEecccceEEE
Confidence            4789998 888888887766553       33443  4556666655         333444467999999999999999


Q ss_pred             EEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHHHHhcCCccccceecceec
Q 029253           96 VKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTA  175 (196)
Q Consensus        96 V~LnLDG~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL~qALGdk~GI~RyG~a~v  175 (196)
                      |+|||||+|+++|+||||||||||++|++||+|||+|+|+||+|||+||++||+||+|||||+||||||+||+|||++++
T Consensus        80 v~l~LDG~G~~~i~TGi~FlDHML~~~a~Hg~fdL~V~a~GDl~vD~HHtvEDvgI~LG~Al~~ALGdk~GI~RyG~a~v  159 (261)
T PLN02800         80 VKINLDGTGVADSSTGIPFLDHMLDQLASHGLFDVHVKATGDLWIDDHHTNEDVALAIGTALLKALGDRKGINRFGDFSA  159 (261)
T ss_pred             EEEEeCCCCceeeecCccHHHHHHHHHHHHcCCCeEEEEecCccccCCCchhhhhhhHHHHHHHHhcCccccceeEeeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccceeeeEEEccCceee
Q 029253          176 PLDEALIHVSLVCLFHILL  194 (196)
Q Consensus       176 PMDEALa~vavDlSG~~~~  194 (196)
                      ||||||++|+||||||-.+
T Consensus       160 PMDEALa~vavDlSGRpyl  178 (261)
T PLN02800        160 PLDEALIEVVLDLSGRPYL  178 (261)
T ss_pred             cccceeEEEEEECCCCCce
Confidence            9999999999999999765

>COG0131 HisB Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.2e-59  Score=392.05  Aligned_cols=117  Identities=51%  Similarity=0.809  Sum_probs=114.5

Q ss_pred             CCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHHH
Q 029253           79 SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALL  158 (196)
Q Consensus        79 ~~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL~  158 (196)
                      .+|++++.|+|+||+|+|+|||||+|+++|+||||||||||+||++||+|||+|+|+||++||+|||+||+||+|||||+
T Consensus         2 ~~R~a~v~R~T~ET~I~V~i~lDg~G~~~i~TGv~FfDHML~~~a~H~~~dl~V~a~GDl~iDdHHtvED~gIaLGqAl~   81 (195)
T COG0131           2 AMRTAEVTRKTKETDIEVSLDLDGTGKSKIDTGVGFFDHMLDQLARHGGFDLEVSAKGDLHIDDHHTVEDTGIALGQALK   81 (195)
T ss_pred             CCceeEEEecccceEEEEEEEcCCCCceeecCCCchHHHHHHHHHHhCCCceEEEEccCccccccchHHHHHHHHHHHHH
Confidence            56999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcCCccccceecceecccccceeeeEEEccCceeec
Q 029253          159 QALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLI  195 (196)
Q Consensus       159 qALGdk~GI~RyG~a~vPMDEALa~vavDlSG~~~~~  195 (196)
                      ||||||+||+|||.+++||||||++|+||||||-.+.
T Consensus        82 ~AlGdk~GI~Rfg~~~vPMDEaL~~~~vDlSGRp~lv  118 (195)
T COG0131          82 EALGDKRGIRRFGSAYVPMDEALARVAVDLSGRPYLV  118 (195)
T ss_pred             HHhcccccceecccccccchhhhheeEEecCCCeeEE
Confidence            9999999999999999999999999999999998763

>PRK13598 hisB imidazoleglycerol-phosphate dehydratase; Provisional

Probab=100.00  E-value=3.7e-58  Score=387.52  Aligned_cols=115  Identities=39%  Similarity=0.552  Sum_probs=113.0

Q ss_pred             ceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHHHHh
Q 029253           81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQA  160 (196)
Q Consensus        81 R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL~qA  160 (196)
                      |+++++|+||||+|+|+|||||+|+++|+||||||||||++|++||+|||+|+|+||++||+||++||+||+|||||+||
T Consensus         3 R~a~i~R~T~ET~I~v~l~Ldg~g~~~i~TGi~FlDHML~~~a~H~~~dL~v~a~GDl~vD~HHtvEDvgI~LG~al~~A   82 (193)
T PRK13598          3 RNANITRETKETKIEVFLDIDRKGEIKVSTPVPFFNHMLITLLTYMNSTATVSATDKLPYDDHHIVEDVAITLGLAIKEA   82 (193)
T ss_pred             ceEEEEEcccceEEEEEEEeCCCCceEEecCCchHHHHHHHHHHHcCCCeEEEEecCccccCCCchhhhhhhHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCccccceecceecccccceeeeEEEccCceeec
Q 029253          161 LGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLI  195 (196)
Q Consensus       161 LGdk~GI~RyG~a~vPMDEALa~vavDlSG~~~~~  195 (196)
                      ||||+||+|||++++||||||++|+||||||-.+.
T Consensus        83 lgdk~gI~RyG~a~vPMDEaLa~~~vDlsGRpylv  117 (193)
T PRK13598         83 LGDKRGIKRFSHQIIPMDEALVLVSLDISGRGMAF  117 (193)
T ss_pred             hcCcccceeeecceecchheeeEEEEEcCCCCeEE
Confidence            99999999999999999999999999999998753

>PRK00951 hisB imidazoleglycerol-phosphate dehydratase; Validated

Probab=100.00  E-value=3.9e-58  Score=387.72  Aligned_cols=115  Identities=56%  Similarity=0.869  Sum_probs=113.2

Q ss_pred             CceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHHHH
Q 029253           80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQ  159 (196)
Q Consensus        80 ~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL~q  159 (196)
                      +|+++++|+|+||+|+|+|||||+|+++|+||||||||||++|++||+|||+|+|+||++||+||++||+||+|||||+|
T Consensus         2 ~R~a~v~R~T~ET~I~v~l~LDG~g~~~i~TGi~FlDHML~~~a~H~~~dL~v~a~GDl~vD~HHtvEDvgI~LG~al~~   81 (195)
T PRK00951          2 MRTAEVERKTKETDISVELNLDGTGKSDIDTGVGFLDHMLDQFARHGLFDLTVKAKGDLHIDDHHTVEDVGIVLGQALKE   81 (195)
T ss_pred             CceEEEEEcccceEEEEEEEeCCCCccceeCCccHHHHHHHHHHHHcCCCeEEEEecCccccCCchHHHHHHHHHHHHHH
Confidence            49999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCccccceecceecccccceeeeEEEccCceee
Q 029253          160 ALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILL  194 (196)
Q Consensus       160 ALGdk~GI~RyG~a~vPMDEALa~vavDlSG~~~~  194 (196)
                      |||||+||+|||++++||||||++|+||||||-.+
T Consensus        82 aLgdk~GI~Ryg~a~~PMDEaL~~v~vDlSGRpyl  116 (195)
T PRK00951         82 ALGDKKGIRRYGHAYVPMDEALARVAVDLSGRPYL  116 (195)
T ss_pred             HhcCccccceeEeeeechhheeEEEEEECCCCCeE
Confidence            99999999999999999999999999999999875

>cd07914 IGPD Imidazoleglycerol-phosphate dehydratase

Probab=100.00  E-value=5.9e-57  Score=379.34  Aligned_cols=112  Identities=49%  Similarity=0.798  Sum_probs=109.9

Q ss_pred             EEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHHHHhcC
Q 029253           83 GEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALG  162 (196)
Q Consensus        83 a~i~R~TkET~I~V~LnLDG~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL~qALG  162 (196)
                      ++++|+|+||+|+|+|||||+|+++|+||||||||||++|++||+|||+|+|+||++||+|||+||+||+|||||+||||
T Consensus         1 a~v~R~T~ET~I~v~l~LDg~g~~~i~TGi~FlDHML~~~a~H~~~dL~v~a~GDl~vD~HHtvEDvgI~LG~al~~aLg   80 (190)
T cd07914           1 AEIERKTKETDIEVELNLDGTGKSKIDTGIGFFDHMLTLFARHGGFDLTVKAKGDLEVDDHHTVEDVGIVLGQALKKALG   80 (190)
T ss_pred             CeeEecccceEEEEEEEeCCCCccceecCCcHHHHHHHHHHHHcCCCeEEEEecCccccCCcchhhhHhhHHHHHHHHhc
Confidence            46999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccceecceecccccceeeeEEEccCceee
Q 029253          163 DRKGINRFGDFTAPLDEALIHVSLVCLFHILL  194 (196)
Q Consensus       163 dk~GI~RyG~a~vPMDEALa~vavDlSG~~~~  194 (196)
                      ||+||+|||++++||||||++|+||||||-.+
T Consensus        81 dk~GI~RyG~a~~PMDEal~~v~vDlsGRp~l  112 (190)
T cd07914          81 DKKGIRRYGSALVPMDEALARVAVDLSGRPYL  112 (190)
T ss_pred             CccccceeEccccccchhheEEEEECCCCCeE
Confidence            99999999999999999999999999999775

Imidazoleglycerol-phosphate dehydratase (IGPD; EC 4.2.1.19) catalyzes the dehydration of imidazole glycerol phosphate to imidazole acetol phosphate, the sixth step of histidine biosynthesis in plants and microorganisms where the histidine is synthesized de novo. There is an internal repeat in the protein domain that is related by pseudo-dyad symmetry, perhaps as a result of an ancient gene duplication. The apo-form of IGPD exists as a catalytically inactive trimer which, in the presence of specific divalent metal cations such as manganese (Mn2+), cobalt (Co2+), cadmium (Cd2+), nickel (Ni2+), iron (Fe2+) and zinc (Zn2+), assembles to form a biologically active high molecular weight metalloenzyme; a 24-mer with 4-3-2 symmetry. Each 24-mer has 24 active sites, and contains around 1.5 metal ions per monomer, each monomer contributing residues to three separate active sites. IGPD enzymes are monofunctional in fungi, plants, archaea and s

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=100.00  E-value=5.4e-53  Score=378.70  Aligned_cols=116  Identities=47%  Similarity=0.728  Sum_probs=113.2

Q ss_pred             CCCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHH
Q 029253           78 DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTAL  157 (196)
Q Consensus        78 ~~~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL  157 (196)
                      ..+|+++++|+|+||+|+|+|||||+|+++|+||||||||||++|++||+|||+|+|+||++||+||++||+||+|||||
T Consensus       163 ~~~r~~~~~R~t~et~i~~~l~ldg~g~~~i~tgi~f~dhml~~~~~h~~~~l~v~~~gd~~vd~hh~~ed~~i~lG~a~  242 (354)
T PRK05446        163 KRDRYAHVVRNTKETDIDVEVWLDREGKSKINTGIGFFDHMLDQIATHGGFRLEIKVKGDLHIDDHHTVEDTALALGEAL  242 (354)
T ss_pred             cCCceEEEEecccceEEEEEEEeCCCCceeeecCCcHHHHHHHHHHHHcCCCeEEEEecCccccCCchHHHHHHHHHHHH
Confidence            35799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCccccceecceecccccceeeeEEEccCceee
Q 029253          158 LQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILL  194 (196)
Q Consensus       158 ~qALGdk~GI~RyG~a~vPMDEALa~vavDlSG~~~~  194 (196)
                      ++|||||+||+|||+ ++||||||++|+||+|||-.+
T Consensus       243 ~~alg~~~gi~r~g~-~~pmdeal~~~~~d~sgr~~~  278 (354)
T PRK05446        243 KQALGDKRGIGRFGF-VLPMDECLARCALDISGRPYL  278 (354)
T ss_pred             HHHhcCccccceeee-ccchhheeeEEEEECCCCCee
Confidence            999999999999999 999999999999999999765

>PF00475 IGPD: Imidazoleglycerol-phosphate dehydratase; InterPro: IPR000807 Imidazoleglycerol-phosphate dehydratase is the enzyme that catalyses the seventh step in the biosynthesis of histidine in bacteria, fungi and plants

Probab=100.00  E-value=6e-46  Score=301.90  Aligned_cols=86  Identities=55%  Similarity=0.883  Sum_probs=75.6

Q ss_pred             cCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHHHHhcCCccccceecceecccccceeeeEEEcc
Q 029253          110 TCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCL  189 (196)
Q Consensus       110 TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL~qALGdk~GI~RyG~a~vPMDEALa~vavDlS  189 (196)
                      ||||||||||+||++||+|||+|+|+||++||+|||+||+||+|||||+||||||+||+|||++++||||||++|+||+|
T Consensus         1 TGi~F~DHML~~la~h~~~dl~v~a~GDl~vD~HHtvEDvgI~LG~al~~aLgdk~GI~Ryg~a~~PMDEaL~~v~vDls   80 (145)
T PF00475_consen    1 TGIGFFDHMLEQLAKHGGFDLSVKAKGDLEVDDHHTVEDVGIVLGQALRQALGDKRGINRYGSASVPMDEALARVAVDLS   80 (145)
T ss_dssp             -S-HHHHHHHHHHHHHHT-EEEEEEEC-TTT-CHHHHHHHHHHHHHHHHHHHTT-TTB--EEEEEEEETTEEEEEEEEES
T ss_pred             CCCchHHHHHHHHHHHCCCCEEEEEeCCCCcCcceehhhHHHHHHHHHHHHhccccCceeeeccccchhhhhheeEEEec
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Cceeec
Q 029253          190 FHILLI  195 (196)
Q Consensus       190 G~~~~~  195 (196)
                      ||-.+.
T Consensus        81 GRp~l~   86 (145)
T PF00475_consen   81 GRPYLV   86 (145)
T ss_dssp             SS-EEE
T ss_pred             CCceEE
Confidence            997753

In most organisms it is a monofunctional protein of about 22 to 29 kD. In some bacteria such as Escherichia coli, it is the C-terminal domain of a bifunctional protein that include a histidinol-phosphatase domain [].; GO: 0004424 imidazoleglycerol-phosphate dehydratase activity, 0000105 histidine biosynthetic process; PDB: 2F1D_G 2AE8_A 1RHY_B.

>KOG3143 consensus Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.5e-45  Score=311.78  Aligned_cols=135  Identities=57%  Similarity=0.773  Sum_probs=127.2

Q ss_pred             hhhhcccccCCccCCCCCCCCCCCCCcccCCCCCCCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHh
Q 029253           45 TRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLAS  124 (196)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIgFlDHML~~~a~  124 (196)
                      .+.|+++.+.+.++.|+.               ...+.++..|+|+||.+++..|+||.+.+.++|||||||||+++||+
T Consensus         6 alV~r~tnetkisiaial---------------d~apl~ee~~~~~E~~~s~~anq~g~qVi~v~TGIgFLDHM~haLAk   70 (219)
T KOG3143|consen    6 ALVMRSTNETKISIAIAL---------------DNAPLGEEKRETKETNVSVKANQDGHQVIDVSTGIGFLDHMLHALAK   70 (219)
T ss_pred             hHHhcccccccceEEEec---------------CCCccchhhccccchhheeeecccCceeeecccCcchHHHHHHHHHh
Confidence            477899999999999953               23366778999999999999999999999999999999999999999


Q ss_pred             hcCcceEEEEecCccccCCcchhhhhhhHHHHHHHhcCCccccceecceecccccceeeeEEEccCceee
Q 029253          125 HGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILL  194 (196)
Q Consensus       125 H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL~qALGdk~GI~RyG~a~vPMDEALa~vavDlSG~~~~  194 (196)
                      ||||+|.++|.||++||||||.||+||+||+||+||||+++|++|||.++.|+||||.+++||+|||-++
T Consensus        71 H~gwsl~v~~~GDlhIDDHHT~ED~aiAlG~Afk~AlG~~~GvkRFG~~~aPLDEALsr~vvDLSgRPYa  140 (219)
T KOG3143|consen   71 HGGWSLHVRATGDLHIDDHHTNEDVAIALGTAFKKALGERKGVKRFGDFTAPLDEALSRVVVDLSGRPYA  140 (219)
T ss_pred             cCCceEEEEecCceeecccccchhHHHHHHHHHHHHHhhhhchhhcccccCcHHHHHhHheeccCCCeeE
Confidence            9999999999999999999999999999999999999999999999999999999999999999999765

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=97.61  E-value=0.00016  Score=66.12  Aligned_cols=78  Identities=23%  Similarity=0.317  Sum_probs=66.0

Q ss_pred             ceEEEEeeeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhh
Q 029253           81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVG  150 (196)
Q Consensus        81 R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIg----------FlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvG  150 (196)
                      |-+. .=---|+-+.|.|++-|++-...+.+.+          -+.|.+..|+.++++.|.|+..|+   ++||.+|-+.
T Consensus       254 r~g~-~~pmdeal~~~~~d~sgr~~~~~~~~~~~~~~g~~~~e~~~~f~~~~~~~~~~tlh~~~~g~---n~hh~~ea~f  329 (354)
T PRK05446        254 RFGF-VLPMDECLARCALDISGRPYLVFKAEFKRERVGDMSTEMVEHFFRSLSDAMGCTLHLKTKGK---NDHHKVESLF  329 (354)
T ss_pred             eeee-ccchhheeeEEEEECCCCCeeEEccCCCccccCCCCchHHHHHHHHHHhcCCCEEEEEeccC---ChHHHHHHHH
Confidence            5555 4567899999999999988655544332          478999999999999999998886   7899999999


Q ss_pred             hhHHHHHHHhcC
Q 029253          151 LAIGTALLQALG  162 (196)
Q Consensus       151 IaLGqAL~qALG  162 (196)
                      -++|.||++|+.
T Consensus       330 Ka~~~al~~a~~  341 (354)
T PRK05446        330 KAFGRALRQAIR  341 (354)
T ss_pred             HHHHHHHHHHhc
Confidence            999999999995

>PLN02800 imidazoleglycerol-phosphate dehydratase

Probab=97.57  E-value=0.00025  Score=63.44  Aligned_cols=79  Identities=27%  Similarity=0.456  Sum_probs=66.7

Q ss_pred             ceEEEEeeeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEE--ecCccccCCcchhh
Q 029253           81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRA--TGDIHIDDHHTNED  148 (196)
Q Consensus        81 R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIg----------FlDHML~~~a~H~g~dL~I~A--~GDl~VDdHHtvED  148 (196)
                      |.+...--=.|+-+.|.|+|-|.+-...+.+++          -+.|++..|+.++++.|.|++  .|+   ++||.+|-
T Consensus       153 RyG~a~vPMDEALa~vavDlSGRpylv~~~~~~~~~iG~~~telv~hFf~s~a~~a~~tLHi~~l~~G~---N~HH~~EA  229 (261)
T PLN02800        153 RFGDFSAPLDEALIEVVLDLSGRPYLGYNLEIPTERVGDLDTEMVEHFFQSLVNNSGMTVHIRQLAAGK---NSHHIIEA  229 (261)
T ss_pred             eeEeeeecccceeEEEEEECCCCCceeecCCCCccccCCCchHHHHHHHHHHHhcCCCEEEEEecccCC---cHHHHHHH
Confidence            566666667899999999999987655544332          378999999999999999987  686   67999999


Q ss_pred             hhhhHHHHHHHhcC
Q 029253          149 VGLAIGTALLQALG  162 (196)
Q Consensus       149 vGIaLGqAL~qALG  162 (196)
                      +.-++|.||++|+.
T Consensus       230 ~FKAfgrALr~A~~  243 (261)
T PLN02800        230 TAKAFGRALRQCAE  243 (261)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999999995

>PRK13598 hisB imidazoleglycerol-phosphate dehydratase; Provisional

Probab=97.53  E-value=0.00024  Score=61.07  Aligned_cols=79  Identities=23%  Similarity=0.304  Sum_probs=63.5

Q ss_pred             ceEEEEeeeCCeEEEEEEEeCCCceeeeecCC----------ccHHHHHHHHHhhcCcceEEE-EecCccccCCcchhhh
Q 029253           81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCI----------PFLDHMLDQLASHGLFDVHVR-ATGDIHIDDHHTNEDV  149 (196)
Q Consensus        81 R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGI----------gFlDHML~~~a~H~g~dL~I~-A~GDl~VDdHHtvEDv  149 (196)
                      |-+...=-=.|+-+.+.|+|-|++-+..+-+.          .-+.|.+..|+.++++.|.|+ ..|+   ++||.+|-+
T Consensus        91 RyG~a~vPMDEaLa~~~vDlsGRpylv~~~~~~~~~iG~~~~elv~~Ff~s~a~~a~~tlHi~~~~G~---N~HH~~EA~  167 (193)
T PRK13598         91 RFSHQIIPMDEALVLVSLDISGRGMAFVNLNLKRSEIGGLATENIPHFFQSFAYNSGVTLHISQLSGY---NTHHIIEAS  167 (193)
T ss_pred             eeecceecchheeeEEEEEcCCCCeEEEccccCccccCCCchhhHHHHHHHHHhcCCCeEEEEEccCC---ChHHHHHHH
Confidence            33333334579999999999998765554332          236799999999999999997 6786   789999999


Q ss_pred             hhhHHHHHHHhcC
Q 029253          150 GLAIGTALLQALG  162 (196)
Q Consensus       150 GIaLGqAL~qALG  162 (196)
                      --++|.||++|+.
T Consensus       168 FKA~g~ALr~A~~  180 (193)
T PRK13598        168 FKGLGLALYEATR  180 (193)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999995

>cd07914 IGPD Imidazoleglycerol-phosphate dehydratase

Probab=97.51  E-value=0.00029  Score=60.42  Aligned_cols=79  Identities=23%  Similarity=0.317  Sum_probs=65.2

Q ss_pred             ceEEEEeeeCCeEEEEEEEeCCCceeeeecCC----------ccHHHHHHHHHhhcCcceEEE-EecCccccCCcchhhh
Q 029253           81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCI----------PFLDHMLDQLASHGLFDVHVR-ATGDIHIDDHHTNEDV  149 (196)
Q Consensus        81 R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGI----------gFlDHML~~~a~H~g~dL~I~-A~GDl~VDdHHtvEDv  149 (196)
                      |.+...--=-|+-+.+.|++-|++-...+.+.          --+.|.+..|+.++++.|.|+ ..|+   ++||.+|-+
T Consensus        87 RyG~a~~PMDEal~~v~vDlsGRp~l~~~~~~~~~~iG~~~telv~~Ff~s~a~~a~~tlHi~~~~G~---N~HH~~Ea~  163 (190)
T cd07914          87 RYGSALVPMDEALARVAVDLSGRPYLVFDAEFPREKIGDFDTELVEEFFRSFANNAGITLHIRVLYGR---NDHHIIEAI  163 (190)
T ss_pred             eeEccccccchhheEEEEECCCCCeEEEecCcCcCccCCCChHHHHHHHHHHHhcCCCeEEEEEeecC---ChHHHHHHH
Confidence            55554555678999999999998765555332          247899999999999999997 7786   789999999


Q ss_pred             hhhHHHHHHHhcC
Q 029253          150 GLAIGTALLQALG  162 (196)
Q Consensus       150 GIaLGqAL~qALG  162 (196)
                      --+||.||++|+.
T Consensus       164 FKalgrALr~A~~  176 (190)
T cd07914         164 FKAFARALRQAVA  176 (190)
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999995

Imidazoleglycerol-phosphate dehydratase (IGPD; EC 4.2.1.19) catalyzes the dehydration of imidazole glycerol phosphate to imidazole acetol phosphate, the sixth step of histidine biosynthesis in plants and microorganisms where the histidine is synthesized de novo. There is an internal repeat in the protein domain that is related by pseudo-dyad symmetry, perhaps as a result of an ancient gene duplication. The apo-form of IGPD exists as a catalytically inactive trimer which, in the presence of specific divalent metal cations such as manganese (Mn2+), cobalt (Co2+), cadmium (Cd2+), nickel (Ni2+), iron (Fe2+) and zinc (Zn2+), assembles to form a biologically active high molecular weight metalloenzyme; a 24-mer with 4-3-2 symmetry. Each 24-mer has 24 active sites, and contains around 1.5 metal ions per monomer, each monomer contributing residues to three separate active sites. IGPD enzymes are monofunctional in fungi, plants, archaea and s

>PRK00951 hisB imidazoleglycerol-phosphate dehydratase; Validated

Probab=97.40  E-value=0.0007  Score=58.31  Aligned_cols=80  Identities=20%  Similarity=0.258  Sum_probs=67.1

Q ss_pred             CceEEEEeeeCCeEEEEEEEeCCCceeeeecCC----------ccHHHHHHHHHhhcCcceEEE-EecCccccCCcchhh
Q 029253           80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCI----------PFLDHMLDQLASHGLFDVHVR-ATGDIHIDDHHTNED  148 (196)
Q Consensus        80 ~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGI----------gFlDHML~~~a~H~g~dL~I~-A~GDl~VDdHHtvED  148 (196)
                      .|.+...--=-|+-+.+.|++-|++-...+-+.          .-+.|.+..|+.++++.|.|+ ..|+   ++||.+|-
T Consensus        90 ~Ryg~a~~PMDEaL~~v~vDlSGRpyl~~~~~~~~~~iG~~~tel~~~Ff~s~a~~a~~tlHi~~~~G~---N~HH~~Ea  166 (195)
T PRK00951         90 RRYGHAYVPMDEALARVAVDLSGRPYLVFDVEFTREKIGTFDTELVREFFEAFANNAGITLHIRVLYGR---NAHHIIEA  166 (195)
T ss_pred             ceeEeeeechhheeEEEEEECCCCCeEEEecCCCccccCCCchHHHHHHHHHHHhcCCCeEEEEecccC---ChHHHHHH
Confidence            366666667789999999999998765554332          247899999999999999997 6786   78999999


Q ss_pred             hhhhHHHHHHHhcC
Q 029253          149 VGLAIGTALLQALG  162 (196)
Q Consensus       149 vGIaLGqAL~qALG  162 (196)
                      +--++|.||++|+.
T Consensus       167 ~FKa~g~ALr~A~~  180 (195)
T PRK00951        167 LFKAFARALRMAVE  180 (195)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999999995

>PF00475 IGPD: Imidazoleglycerol-phosphate dehydratase; InterPro: IPR000807 Imidazoleglycerol-phosphate dehydratase is the enzyme that catalyses the seventh step in the biosynthesis of histidine in bacteria, fungi and plants

Probab=97.39  E-value=0.001  Score=55.07  Aligned_cols=76  Identities=26%  Similarity=0.419  Sum_probs=61.5

Q ss_pred             CceEEEEeeeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEEe-cCccccCCcchhh
Q 029253           80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRAT-GDIHIDDHHTNED  148 (196)
Q Consensus        80 ~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIg----------FlDHML~~~a~H~g~dL~I~A~-GDl~VDdHHtvED  148 (196)
                      .|.+...---.|+-+.|.|++-|++-...+-+.+          -+.|.+..|+.++++.|.|++. |+   ++||.+|-
T Consensus        59 ~Ryg~a~~PMDEaL~~v~vDlsGRp~l~~~~~~~~~~iG~~~~el~~~F~~sla~~~~~tlHi~~~~G~---N~HH~~Ea  135 (145)
T PF00475_consen   59 NRYGSASVPMDEALARVAVDLSGRPYLVFNGEFPREKIGDFDTELVEHFFRSLANNAGITLHIRVLYGE---NDHHIIEA  135 (145)
T ss_dssp             --EEEEEEEETTEEEEEEEEESSS-EEEEE---SSSEETTEETTHHHHHHHHHHHHHTEEEEEEEEE-S---SHHHHHHH
T ss_pred             eeeeccccchhhhhheeEEEecCCceEEEecccCccccCCCChhhHHHHHHHHHHhCCceEEEEEEeCC---ChHHHHHH
Confidence            3778888889999999999999987665554443          3789999999999999999998 85   67999999


Q ss_pred             hhhhHHHHHH
Q 029253          149 VGLAIGTALL  158 (196)
Q Consensus       149 vGIaLGqAL~  158 (196)
                      +--++|+||+
T Consensus       136 ~FKa~grALR  145 (145)
T PF00475_consen  136 IFKAFGRALR  145 (145)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhC
Confidence            9999999985

In most organisms it is a monofunctional protein of about 22 to 29 kD. In some bacteria such as Escherichia coli, it is the C-terminal domain of a bifunctional protein that include a histidinol-phosphatase domain [].; GO: 0004424 imidazoleglycerol-phosphate dehydratase activity, 0000105 histidine biosynthetic process; PDB: 2F1D_G 2AE8_A 1RHY_B.

>COG0131 HisB Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]

Probab=96.92  E-value=0.0022  Score=55.47  Aligned_cols=72  Identities=24%  Similarity=0.305  Sum_probs=58.2

Q ss_pred             eCCeEEEEEEEeCCCceeeeecC----------CccHHHHHHHHHhhcCcceEEEE-ecCccccCCcchhhhhhhHHHHH
Q 029253           89 TKETNVSVKINVDGSGVADSSTC----------IPFLDHMLDQLASHGLFDVHVRA-TGDIHIDDHHTNEDVGLAIGTAL  157 (196)
Q Consensus        89 TkET~I~V~LnLDG~G~~~I~TG----------IgFlDHML~~~a~H~g~dL~I~A-~GDl~VDdHHtvEDvGIaLGqAL  157 (196)
                      -.|+-..+.+++-|+.-...+-.          .--+-|.+..||.|+++.|.+++ .|+   ++||-+|-+-=++|.||
T Consensus       100 MDEaL~~~~vDlSGRp~lv~~~~f~~~~vG~~~te~v~hFf~sla~~a~itlHi~~~~G~---N~HH~iEa~FKA~arAL  176 (195)
T COG0131         100 MDEALARVAVDLSGRPYLVFNAEFTREKVGDFDTELVEHFFRSLANNAGITLHLSVLYGK---NDHHIIEALFKAFARAL  176 (195)
T ss_pred             chhhhheeEEecCCCeeEEEecccCccccCCcchhhHHHHHHHHHHhcCcEEEEEeccCC---ChHHHHHHHHHHHHHHH
Confidence            46888888999888754332221          12467999999999999999999 875   68999999999999999


Q ss_pred             HHhcCC
Q 029253          158 LQALGD  163 (196)
Q Consensus       158 ~qALGd  163 (196)
                      ++|+--
T Consensus       177 r~A~~i  182 (195)
T COG0131         177 RQAVEI  182 (195)
T ss_pred             HHHhcc
Confidence            999843

>KOG3143 consensus Imidazoleglycerol-phosphate dehydratase [Amino acid transport and metabolism]

Probab=89.77  E-value=0.66  Score=40.64  Aligned_cols=75  Identities=27%  Similarity=0.340  Sum_probs=60.2

Q ss_pred             eeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHH
Q 029253           88 VTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTAL  157 (196)
Q Consensus        88 ~TkET~I~V~LnLDG~G~~~I~TGIg----------FlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL  157 (196)
                      --.|.-+.+.++|.|+--..++-|++          ..-|.|..|+.-+|+.|.|+|---  -++||.+|-.--+|-.|+
T Consensus       122 PLDEALsr~vvDLSgRPYav~~Lgl~rekVG~lscemipHfl~Sf~~asgiTLHv~cL~G--kNdHHr~EsaFKalAvAl  199 (219)
T KOG3143|consen  122 PLDEALSRVVVDLSGRPYAVYNLGLPREKVGTLSCEMIPHFLQSFVNASGITLHVRCLAG--KNDHHRIESAFKALAVAL  199 (219)
T ss_pred             cHHHHHhHheeccCCCeeEEEecCCchhhcccchHhhHHHHHHHHHhhcCcEEEEEeecC--CCchhHHHHHHHHHHHHH
Confidence            34566677888888876666666664          467999999999999999998532  467999999999999999


Q ss_pred             HHhcCCc
Q 029253          158 LQALGDR  164 (196)
Q Consensus       158 ~qALGdk  164 (196)
                      +||-..+
T Consensus       200 R~ATsp~  206 (219)
T KOG3143|consen  200 RQATSPR  206 (219)
T ss_pred             HHhcCCC
Confidence            9997644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	196
2f1d_A	207	X-Ray Structure Of Imidazoleglycerol-Phosphate Dehy		1e-55
1rhy_A	202	Crystal Structure Of Imidazole Glycerol Phosphate D		5e-23
2ae8_A	221	Crystal Structure Of Imidazoleglycerol-Phosphate De		1e-12

>pdb|2F1D|A Chain A, X-Ray Structure Of Imidazoleglycerol-Phosphate Dehydratase Length = 207

Iteration: 1
 Score =  212 bits (540), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 102/116 (87%), Positives = 112/116 (96%)
Query: 71  ASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDV 130
           AS+SS++  GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPFLDHMLDQLASHGLFDV
Sbjct: 1   ASSSSSMALGRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDV 60
Query: 131 HVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           HVRATGD+HIDDHHTNED+ LAIGTALL+ALG+RKGINRFGDFTAPLDEALIHVSL
Sbjct: 61  HVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSL 116

>pdb|1RHY|A Chain A, Crystal Structure Of Imidazole Glycerol Phosphate Dehydratase Length = 202

Iteration: 1
 Score =  103 bits (258), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 79  SGRIGEVKRVTKETNVSVKINVDG-SGVADS----STCIPFLDHMLDQLASHGLFDVHVR 133
           S RI  V+R T ET++S  I++D   GV +     ST I FLDHM   LA HG   + ++
Sbjct: 2   SERIASVERTTSETHISCTIDLDHIPGVTEQKINVSTGIGFLDHMFTALAKHGGMSLQLQ 61
Query: 134 ATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEAL 181
             GD+HIDDHHT ED  LA+G A  +ALG+RKGI R+G   APLDE+L
Sbjct: 62  CKGDLHIDDHHTAEDCALALGEAFKKALGERKGIKRYGYAYAPLDESL 109

>pdb|2AE8|A Chain A, Crystal Structure Of Imidazoleglycerol-Phosphate Dehydratase From Staphylococcus Aureus Subsp. Aureus N315 Length = 221

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 82  IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHID 141
           I + +R T ET +++ I+ D S  +  +T + FL+H L     H    +++ A GDI +D
Sbjct: 31  IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHXLTLFTFHSGLSLNIEAQGDIDVD 89
Query: 142 DHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHV 184
           DHH  ED+G+ IG  LL+ + D+K   R+G    P DE L  V
Sbjct: 90  DHHVTEDIGIVIGQLLLEXIKDKKHFVRYGTXYIPXDETLARV 132

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	196
2f1d_A	207	IGPD 1, imidazoleglycerol-phosphate dehydratase 1;	2e-62
2ae8_A	221	IGPD, imidazoleglycerol-phosphate dehydratase; bet	1e-57
1rhy_A	202	IGPD, imidazole glycerol phosphate dehydratase; de	5e-57

>2f1d_A IGPD 1, imidazoleglycerol-phosphate dehydratase 1; herbicide, manganese, histidine biosynthesis, lyase; 3.00A {Arabidopsis thaliana} SCOP: d.14.1.9 d.14.1.9 Length = 207

 Score =  191 bits (487), Expect = 2e-62
 Identities = 102/116 (87%), Positives = 112/116 (96%)

Query: 71  ASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDV 130
           AS+SS++  GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPFLDHMLDQLASHGLFDV
Sbjct: 1   ASSSSSMALGRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDV 60

Query: 131 HVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           HVRATGD+HIDDHHTNED+ LAIGTALL+ALG+RKGINRFGDFTAPLDEALIHVSL
Sbjct: 61  HVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSL 116

>2ae8_A IGPD, imidazoleglycerol-phosphate dehydratase; beta-alpha-beta sandwich, duplication of A half-domain; 2.01A {Staphylococcus aureus subsp} SCOP: d.14.1.9 d.14.1.9 Length = 221

 Score =  180 bits (458), Expect = 1e-57
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 72  STSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVH 131
           S   +  +  I + +R T ET +++ I+ D    +  +T + FL+HML     H    ++
Sbjct: 21  SNIGSGSNAMIYQKQRNTAETQLNISIS-DDQSPSHINTGVGFLNHMLTLFTFHSGLSLN 79

Query: 132 VRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           + A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +
Sbjct: 80  IEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVV 134

>1rhy_A IGPD, imidazole glycerol phosphate dehydratase; dehydratases, histidine biosynthesis, LEFT-handed B-A-B CROS motif, gene duplication; 2.30A {Filobasidiella neoformans} SCOP: d.14.1.9 d.14.1.9 Length = 202

 Score =  177 bits (452), Expect = 5e-57
 Identities = 52/111 (46%), Positives = 68/111 (61%), Gaps = 5/111 (4%)

Query: 81  RIGEVKRVTKETNVSVKINVD-----GSGVADSSTCIPFLDHMLDQLASHGLFDVHVRAT 135
           RI  V+R T ET++S  I++D          + ST I FLDHM   LA HG   + ++  
Sbjct: 4   RIASVERTTSETHISCTIDLDHIPGVTEQKINVSTGIGFLDHMFTALAKHGGMSLQLQCK 63

Query: 136 GDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSL 186
           GD+HIDDHHT ED  LA+G A  +ALG+RKGI R+G   APLDE+L    +
Sbjct: 64  GDLHIDDHHTAEDCALALGEAFKKALGERKGIKRYGYAYAPLDESLSRAVI 114

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	196
2f1d_A	207	IGPD 1, imidazoleglycerol-phosphate dehydratase 1;	100.0
1rhy_A	202	IGPD, imidazole glycerol phosphate dehydratase; de	100.0
2ae8_A	221	IGPD, imidazoleglycerol-phosphate dehydratase; bet	100.0
1rhy_A	202	IGPD, imidazole glycerol phosphate dehydratase; de	97.56
2ae8_A	221	IGPD, imidazoleglycerol-phosphate dehydratase; bet	97.55
2f1d_A	207	IGPD 1, imidazoleglycerol-phosphate dehydratase 1;	97.51

>2f1d_A IGPD 1, imidazoleglycerol-phosphate dehydratase 1; herbicide, manganese, histidine biosynthesis, lyase; 3.00A {Arabidopsis thaliana} SCOP: d.14.1.9 d.14.1.9

Probab=100.00  E-value=1.2e-59  Score=398.88  Aligned_cols=118  Identities=84%  Similarity=1.177  Sum_probs=114.0

Q ss_pred             CCCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHH
Q 029253           78 DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTAL  157 (196)
Q Consensus        78 ~~~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL  157 (196)
                      ..+|+++++|+|+||+|+|+|||||+|+++|+||||||||||+||++||+|||+|+|+||++||+|||+||+||+|||||
T Consensus         8 ~~~R~a~v~R~T~ET~I~v~l~LDG~G~~~i~TGigFlDHML~~~a~Hg~~dL~v~a~GDl~iD~HHtvEDvgI~LG~Al   87 (207)
T 2f1d_A            8 ALGRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTAL   87 (207)
T ss_dssp             --CCEEEEEEECSSCEEEEEEETTCCCCEEEECSCHHHHHHHHHHHHHHTCEEEEEEECCTTTCSHHHHHHHHHHHHHHH
T ss_pred             cccceEEEEEcCCcEEEEEEEEeCCCCceeeeCCChHHHHHHHHHHHHcCCceEEEEecCccccCCCchhhhhhhHHHHH
Confidence            35699999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCccccceecceecccccceeeeEEEccCceeec
Q 029253          158 LQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLI  195 (196)
Q Consensus       158 ~qALGdk~GI~RyG~a~vPMDEALa~vavDlSG~~~~~  195 (196)
                      +||||||+||+|||++++||||||++|+||||||-.+.
T Consensus        88 ~~ALGdk~GI~RyG~a~vPMDEaLa~v~vDlSGRpylv  125 (207)
T 2f1d_A           88 LKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLG  125 (207)
T ss_dssp             HHHHTTCCSBCCBCCEEEEETTEEEEEEEECCSSCEEE
T ss_pred             HHHhcCccccceeEeeeecccceeeEEEEEcCCCCeEE
Confidence            99999999999999999999999999999999998764

>1rhy_A IGPD, imidazole glycerol phosphate dehydratase; dehydratases, histidine biosynthesis, LEFT-handed B-A-B CROS motif, gene duplication; 2.30A {Filobasidiella neoformans} SCOP: d.14.1.9 d.14.1.9

Probab=100.00  E-value=2.5e-59  Score=395.66  Aligned_cols=117  Identities=45%  Similarity=0.686  Sum_probs=108.4

Q ss_pred             CCceEEEEeeeCCeEEEEEEEeCCCc-----eeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhH
Q 029253           79 SGRIGEVKRVTKETNVSVKINVDGSG-----VADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAI  153 (196)
Q Consensus        79 ~~R~a~i~R~TkET~I~V~LnLDG~G-----~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaL  153 (196)
                      ++|+++++|+|+||+|+|+|||||+|     +++|+||||||||||+||++||+|||+|+|+||++||+|||+||+||+|
T Consensus         2 ~~R~a~v~R~T~ET~I~v~l~LDG~g~~~~~~~~i~TGigFlDHML~~la~Hg~~dL~v~a~GDl~iD~HHtvED~gI~L   81 (202)
T 1rhy_A            2 SERIASVERTTSETHISCTIDLDHIPGVTEQKINVSTGIGFLDHMFTALAKHGGMSLQLQCKGDLHIDDHHTAEDCALAL   81 (202)
T ss_dssp             CCCEEEEEEECSSCEEEEEEESCCCTTTCCCCEEEECSCHHHHHHHHHHHHHTTCEEEEEEESCC------CCHHHHHHH
T ss_pred             CceeEEEEecCCceEEEEEEEeCCCCCcccceeeeeCCCcHHHHHHHHHHHHcCCceEEEEecCCccccCccHHHhhhhH
Confidence            46999999999999999999999999     9999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCccccceecceecccccceeeeEEEccCceeec
Q 029253          154 GTALLQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLI  195 (196)
Q Consensus       154 GqAL~qALGdk~GI~RyG~a~vPMDEALa~vavDlSG~~~~~  195 (196)
                      ||||+||||||+||+|||++++||||||++|+||||||-.+.
T Consensus        82 G~Al~~ALGdk~GI~RyG~a~vPMDEaL~~v~vDlSgRpylv  123 (202)
T 1rhy_A           82 GEAFKKALGERKGIKRYGYAYAPLDESLSRAVIDISSRPYFM  123 (202)
T ss_dssp             HHHHHHHHTTCTTCCCEEEEEEEETTEEEEEEEECSSCCEEE
T ss_pred             HHHHHHHhcCccccceeecccccccceeeEEEEEcCCCceEE
Confidence            999999999999999999999999999999999999998764

>2ae8_A IGPD, imidazoleglycerol-phosphate dehydratase; beta-alpha-beta sandwich, duplication of A half-domain; 2.01A {Staphylococcus aureus subsp} SCOP: d.14.1.9 d.14.1.9

Probab=100.00  E-value=7.5e-58  Score=390.85  Aligned_cols=117  Identities=33%  Similarity=0.535  Sum_probs=104.3

Q ss_pred             CCCceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHH
Q 029253           78 DSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTAL  157 (196)
Q Consensus        78 ~~~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL  157 (196)
                      +.+|+++++|+|+||+|+|+|||| +|+++|+||||||||||+||++||+|||+|+|+||++||+|||+||+||+|||||
T Consensus        27 ~~~R~a~v~R~T~ET~I~v~l~LD-~G~~~i~TGigFlDHML~~la~Hg~~dL~v~a~GDl~iD~HHTvEDvgI~LGqAl  105 (221)
T 2ae8_A           27 SNAMIYQKQRNTAETQLNISISDD-QSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLL  105 (221)
T ss_dssp             ---CEEEEEC----CEEEEEEESS-CCCCEEECSCHHHHHHHHHHHHHHCCEEEEEEECC----HHHHHHHHHHHHHHHH
T ss_pred             CcceeEEEEEeCCcEEEEEEEEeC-CCcceecCCCcHHHHHHHHHHHHcCCceEEEEeeCCcccCCccHHHHHhHHHHHH
Confidence            456999999999999999999999 9999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCccccceecceecccccceeeeEEEccCceeec
Q 029253          158 LQALGDRKGINRFGDFTAPLDEALIHVSLVCLFHILLI  195 (196)
Q Consensus       158 ~qALGdk~GI~RyG~a~vPMDEALa~vavDlSG~~~~~  195 (196)
                      +||||||+||+|||++++||||||++|+||||||-.+.
T Consensus       106 ~~ALGdk~GI~RyG~a~vPMDEaLa~v~vDlSGRpylv  143 (221)
T 2ae8_A          106 LEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLS  143 (221)
T ss_dssp             HHHHHHCCSBCCEEEEEEEETTEEEEEEEECCSCCEEE
T ss_pred             HHHhcCcccCceeecceecccceeEEEEEEcCCCceEE
Confidence            99999999999999999999999999999999998764

>1rhy_A IGPD, imidazole glycerol phosphate dehydratase; dehydratases, histidine biosynthesis, LEFT-handed B-A-B CROS motif, gene duplication; 2.30A {Filobasidiella neoformans} SCOP: d.14.1.9 d.14.1.9

Probab=97.56  E-value=0.0003  Score=59.67  Aligned_cols=81  Identities=19%  Similarity=0.245  Sum_probs=69.8

Q ss_pred             CceEEEEeeeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEE-ecCccccCCcchhh
Q 029253           80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRA-TGDIHIDDHHTNED  148 (196)
Q Consensus        80 ~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIg----------FlDHML~~~a~H~g~dL~I~A-~GDl~VDdHHtvED  148 (196)
                      .|.+...--=-|+-+.+.|++-|+.-...+-+.+          -+.|.+..|+.++++.|.|++ .|+   ++||.+|-
T Consensus        96 ~RyG~a~vPMDEaL~~v~vDlSgRpylv~~~~~~~~~iG~~~tel~~~Ff~s~a~~a~~tLHi~~l~G~---N~HH~~Ea  172 (202)
T 1rhy_A           96 KRYGYAYAPLDESLSRAVIDISSRPYFMCHLPFTREKVGDLSTEMVSHLLQSFAFAAGVTLHIDSIRGE---NNHHIAES  172 (202)
T ss_dssp             CCEEEEEEEETTEEEEEEEECSSCCEEEEECCCCSSEETTEETHHHHHHHHHHHHHHTCEEEEEEEECS---SHHHHHHH
T ss_pred             ceeecccccccceeeEEEEEcCCCceEEEccCCCCcccCCCChHHHHHHHHHHHhhCCCeEEEEEEecC---CcHHHHHH
Confidence            3777777788999999999999987666654432          588999999999999999996 785   67999999


Q ss_pred             hhhhHHHHHHHhcCC
Q 029253          149 VGLAIGTALLQALGD  163 (196)
Q Consensus       149 vGIaLGqAL~qALGd  163 (196)
                      +--++|.||++|+..
T Consensus       173 ~FKA~arALr~A~~~  187 (202)
T 1rhy_A          173 AFKALALAIRMAISR  187 (202)
T ss_dssp             HHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999999864

>2ae8_A IGPD, imidazoleglycerol-phosphate dehydratase; beta-alpha-beta sandwich, duplication of A half-domain; 2.01A {Staphylococcus aureus subsp} SCOP: d.14.1.9 d.14.1.9

Probab=97.55  E-value=0.00036  Score=59.99  Aligned_cols=81  Identities=20%  Similarity=0.272  Sum_probs=69.9

Q ss_pred             CceEEEEeeeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEE-ecCccccCCcchhh
Q 029253           80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRA-TGDIHIDDHHTNED  148 (196)
Q Consensus        80 ~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIg----------FlDHML~~~a~H~g~dL~I~A-~GDl~VDdHHtvED  148 (196)
                      .|.+...--=-|+-+.+.|++-|+.-...+-+.+          -+.|.+..|+.++++.|.|++ .|+   ++||.+|-
T Consensus       116 ~RyG~a~vPMDEaLa~v~vDlSGRpylv~~~~~~~~~iG~~~telv~hFf~s~a~~a~~tLHi~~l~G~---N~HH~~EA  192 (221)
T 2ae8_A          116 VRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGG---NTHHEIEA  192 (221)
T ss_dssp             CCEEEEEEEETTEEEEEEEECCSCCEEEEECCCSCSEETTEETTHHHHHHHHHHHHTTCEEEEEEEECS---CHHHHHHH
T ss_pred             ceeecceecccceeEEEEEEcCCCceEEEecccCCcccCCCChHHHHHHHHHHHhcCCceEEEEeeecC---CcHHHHHH
Confidence            3777777788999999999999988666654432          588999999999999999999 785   67999999


Q ss_pred             hhhhHHHHHHHhcCC
Q 029253          149 VGLAIGTALLQALGD  163 (196)
Q Consensus       149 vGIaLGqAL~qALGd  163 (196)
                      +--++|.||++|+.-
T Consensus       193 ~FKA~arALr~A~~~  207 (221)
T 2ae8_A          193 IFKAFSRALGIALTA  207 (221)
T ss_dssp             HHHHHHHHHHHHTCB
T ss_pred             HHHHHHHHHHHhhCc
Confidence            999999999999863

>2f1d_A IGPD 1, imidazoleglycerol-phosphate dehydratase 1; herbicide, manganese, histidine biosynthesis, lyase; 3.00A {Arabidopsis thaliana} SCOP: d.14.1.9 d.14.1.9

Probab=97.51  E-value=0.00019  Score=61.15  Aligned_cols=79  Identities=25%  Similarity=0.418  Sum_probs=67.3

Q ss_pred             ceEEEEeeeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEE-ecCccccCCcchhhh
Q 029253           81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRA-TGDIHIDDHHTNEDV  149 (196)
Q Consensus        81 R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIg----------FlDHML~~~a~H~g~dL~I~A-~GDl~VDdHHtvEDv  149 (196)
                      |.+...--=-|+-+.+.|++-|+.-...+-+.+          -+.|.+..|+.++++.|.|++ .|+   ++||.+|-+
T Consensus        99 RyG~a~vPMDEaLa~v~vDlSGRpylv~~~~~~~~~iG~~~tel~~~Ff~s~a~~a~~tLHi~~l~G~---N~HH~~Ea~  175 (207)
T 2f1d_A           99 RFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGE---NSHHIIEAT  175 (207)
T ss_dssp             CBCCEEEEETTEEEEEEEECCSSCEEEEECCCSSSEETTEETTHHHHHHHHHHHHHTCEEEEEEEECC---CHHHHHHHH
T ss_pred             eeEeeeecccceeeEEEEEcCCCCeEEEecccCccccCCCchhhHHHHHHHHHhcCCCEEEEEeeecC---CcHHHHHHH
Confidence            666566677899999999999988666654432          588999999999999999995 786   679999999


Q ss_pred             hhhHHHHHHHhcC
Q 029253          150 GLAIGTALLQALG  162 (196)
Q Consensus       150 GIaLGqAL~qALG  162 (196)
                      --++|.||++|+.
T Consensus       176 FKA~arALr~A~~  188 (207)
T 2f1d_A          176 FKAFARALRQATE  188 (207)
T ss_dssp             HHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhc
Confidence            9999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	196
d2f1da1	86	d.14.1.9 (A:10-95) Imidazole glycerol phosphate de	3e-38
d2ae8a1	84	d.14.1.9 (A:1-84) Imidazole glycerol phosphate deh	5e-34
d1rhya1	92	d.14.1.9 (A:2-93) Imidazole glycerol phosphate deh	2e-33
d2f1da2	97	d.14.1.9 (A:96-192) Imidazole glycerol phosphate d	2e-04
d1rhya2	94	d.14.1.9 (A:94-187) Imidazole glycerol phosphate d	3e-04

>d2f1da1 d.14.1.9 (A:10-95) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 86

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  124 bits (314), Expect = 3e-38
 Identities = 77/86 (89%), Positives = 84/86 (97%)

Query: 80  GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIH 139
           GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPFLDHMLDQLASHGLFDVHVRATGD+H
Sbjct: 1   GRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVH 60

Query: 140 IDDHHTNEDVGLAIGTALLQALGDRK 165
           IDDHHTNED+ LAIGTALL+ALG+RK
Sbjct: 61  IDDHHTNEDIALAIGTALLKALGERK 86

>d2ae8a1 d.14.1.9 (A:1-84) Imidazole glycerol phosphate dehydratase {Staphylococcus aureus [TaxId: 1280]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Staphylococcus aureus [TaxId: 1280]

 Score =  114 bits (286), Expect = 5e-34
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 82  IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHID 141
           I + +R T ET +++ I+ D    +  +T + FL+HML     H    +++ A GDI +D
Sbjct: 2   IYQKQRNTAETQLNISIS-DDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVD 60

Query: 142 DHHTNEDVGLAIGTALLQALGDRK 165
           DHH  ED+G+ IG  LL+ + D+K
Sbjct: 61  DHHVTEDIGIVIGQLLLEMIKDKK 84

>d1rhya1 d.14.1.9 (A:2-93) Imidazole glycerol phosphate dehydratase {Fungus (Filobasidiella neoformans) [TaxId: 5207]} Length = 92

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Fungus (Filobasidiella neoformans) [TaxId: 5207]

 Score =  112 bits (282), Expect = 2e-33
 Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 5/92 (5%)

Query: 79  SGRIGEVKRVTKETNVSVKINVD-----GSGVADSSTCIPFLDHMLDQLASHGLFDVHVR 133
           S RI  V+R T ET++S  I++D          + ST I FLDHM   LA HG   + ++
Sbjct: 1   SERIASVERTTSETHISCTIDLDHIPGVTEQKINVSTGIGFLDHMFTALAKHGGMSLQLQ 60

Query: 134 ATGDIHIDDHHTNEDVGLAIGTALLQALGDRK 165
             GD+HIDDHHT ED  LA+G A  +ALG+RK
Sbjct: 61  CKGDLHIDDHHTAEDCALALGEAFKKALGERK 92

>d2f1da2 d.14.1.9 (A:96-192) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 97

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 21/23 (91%), Positives = 21/23 (91%)

Query: 166 GINRFGDFTAPLDEALIHVSLVC 188
           GINRFGDFTAPLDEALIHVSL  
Sbjct: 1   GINRFGDFTAPLDEALIHVSLDL 23

>d1rhya2 d.14.1.9 (A:94-187) Imidazole glycerol phosphate dehydratase {Fungus (Filobasidiella neoformans) [TaxId: 5207]} Length = 94

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Fungus (Filobasidiella neoformans) [TaxId: 5207]

 Score = 36.4 bits (84), Expect = 3e-04
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 166 GINRFGDFTAPLDEALIHVSL 186
           GI R+G   APLDE+L    +
Sbjct: 1   GIKRYGYAYAPLDESLSRAVI 21

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	196
d2f1da1	86	Imidazole glycerol phosphate dehydratase {Thale cr	100.0
d1rhya1	92	Imidazole glycerol phosphate dehydratase {Fungus (	100.0
d2ae8a1	84	Imidazole glycerol phosphate dehydratase {Staphylo	100.0
d1rhya2	94	Imidazole glycerol phosphate dehydratase {Fungus (	98.33
d2ae8a2	95	Imidazole glycerol phosphate dehydratase {Staphylo	98.15
d2f1da2	97	Imidazole glycerol phosphate dehydratase {Thale cr	98.05

>d2f1da1 d.14.1.9 (A:10-95) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.1e-46  Score=279.09  Aligned_cols=86  Identities=90%  Similarity=1.311  Sum_probs=84.5

Q ss_pred             CceEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHHHH
Q 029253           80 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQ  159 (196)
Q Consensus        80 ~R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL~q  159 (196)
                      .|+++++|+|+||+|.|+|||||+|+++|+||||||||||+||++||+|||+|+|+||++||+||++||+||+||+||+|
T Consensus         1 gR~a~v~R~TkET~I~v~l~lDG~g~~~i~TGi~FldHML~~~a~h~~~dl~i~a~GDl~vD~HHtvED~gI~LG~al~~   80 (86)
T d2f1da1           1 GRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTALLK   80 (86)
T ss_dssp             CCEEEEEEECSSCEEEEEEETTCCCCEEEECSCHHHHHHHHHHHHHHTCEEEEEEECCTTTCSHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEecCceEEEEEEEeCCCCccccccCchHHHHHHHHHHHhCCCeEEEEEEeccccCcchhhHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCcc
Q 029253          160 ALGDRK  165 (196)
Q Consensus       160 ALGdk~  165 (196)
                      |||||+
T Consensus        81 ALGdkk   86 (86)
T d2f1da1          81 ALGERK   86 (86)
T ss_dssp             HHTTCC
T ss_pred             HhcCCC
Confidence            999985

>d1rhya1 d.14.1.9 (A:2-93) Imidazole glycerol phosphate dehydratase {Fungus (Filobasidiella neoformans) [TaxId: 5207]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Fungus (Filobasidiella neoformans) [TaxId: 5207]

Probab=100.00  E-value=8.9e-46  Score=279.47  Aligned_cols=86  Identities=49%  Similarity=0.771  Sum_probs=78.0

Q ss_pred             CceEEEEeeeCCeEEEEEEEeC-----CCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHH
Q 029253           80 GRIGEVKRVTKETNVSVKINVD-----GSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIG  154 (196)
Q Consensus        80 ~R~a~i~R~TkET~I~V~LnLD-----G~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLG  154 (196)
                      .|+++++|+|+||+|.|+||||     |+|+++|+||||||||||+||++||+|||+|+|+||++||+||++||+||+||
T Consensus         2 ~R~a~v~R~T~ET~I~v~l~LD~~~g~g~g~~~i~TGi~F~DHML~~~a~H~~~dl~i~a~GDl~vD~HHtvEDvgI~LG   81 (92)
T d1rhya1           2 ERIASVERTTSETHISCTIDLDHIPGVTEQKINVSTGIGFLDHMFTALAKHGGMSLQLQCKGDLHIDDHHTAEDCALALG   81 (92)
T ss_dssp             CCEEEEEEECSSCEEEEEEESCCCTTTCCCCEEEECSCHHHHHHHHHHHHHTTCEEEEEEESCC------CCHHHHHHHH
T ss_pred             CceEEEeEecCceEEEEEEEccCCCCCcCceeeeecCchHHHHHHHHHHHhcCCCEEEEEEeccccccchhhHHHHHHHH
Confidence            5999999999999999999999     68899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCcc
Q 029253          155 TALLQALGDRK  165 (196)
Q Consensus       155 qAL~qALGdk~  165 (196)
                      |||++|||||+
T Consensus        82 ~al~~ALGdkk   92 (92)
T d1rhya1          82 EAFKKALGERK   92 (92)
T ss_dssp             HHHHHHHTTCT
T ss_pred             HHHHHHhccCC
Confidence            99999999985

>d2ae8a1 d.14.1.9 (A:1-84) Imidazole glycerol phosphate dehydratase {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=1.8e-43  Score=263.09  Aligned_cols=83  Identities=37%  Similarity=0.648  Sum_probs=72.4

Q ss_pred             eEEEEeeeCCeEEEEEEEeCCCceeeeecCCccHHHHHHHHHhhcCcceEEEEecCccccCCcchhhhhhhHHHHHHHhc
Q 029253           82 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQAL  161 (196)
Q Consensus        82 ~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIgFlDHML~~~a~H~g~dL~I~A~GDl~VDdHHtvEDvGIaLGqAL~qAL  161 (196)
                      .++++|+|+||+|.|+|| ||.|.++|+||||||||||+||++||+|||+|+|+||++||+||++||+||+|||||++||
T Consensus         2 i~~~~R~T~ET~I~v~l~-~~~g~~~i~Tgi~FldHML~~~~~h~~~dl~i~a~GDl~iD~HHtvEDvgI~LG~al~~AL   80 (84)
T d2ae8a1           2 IYQKQRNTAETQLNISIS-DDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMI   80 (84)
T ss_dssp             EEEEEC----CEEEEEEE-SSCCCCEEECSCHHHHHHHHHHHHHHCCEEEEEEECC----HHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEeccCCeEEEEEEE-cCCCcceEecCchHHHHHHHHHHHhCCCcEEEEEEecccccccchHHHHHHHHHHHHHHHh
Confidence            588999999999999999 6778899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcc
Q 029253          162 GDRK  165 (196)
Q Consensus       162 Gdk~  165 (196)
                      |||+
T Consensus        81 gdkk   84 (84)
T d2ae8a1          81 KDKK   84 (84)
T ss_dssp             HHCC
T ss_pred             ccCC
Confidence            9985

>d1rhya2 d.14.1.9 (A:94-187) Imidazole glycerol phosphate dehydratase {Fungus (Filobasidiella neoformans) [TaxId: 5207]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Fungus (Filobasidiella neoformans) [TaxId: 5207]

Probab=98.33  E-value=5.4e-07  Score=66.50  Aligned_cols=79  Identities=19%  Similarity=0.257  Sum_probs=65.1

Q ss_pred             ceEEEEeeeCCeEEEEEEEeCCCceeeeecCCc----------cHHHHHHHHHhhcCcceEEEE-ecCccccCCcchhhh
Q 029253           81 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIP----------FLDHMLDQLASHGLFDVHVRA-TGDIHIDDHHTNEDV  149 (196)
Q Consensus        81 R~a~i~R~TkET~I~V~LnLDG~G~~~I~TGIg----------FlDHML~~~a~H~g~dL~I~A-~GDl~VDdHHtvEDv  149 (196)
                      |.+...=-=.|+-+.+.|+|-|++-+..+...+          -+.|.+..|+.|+++.|.|+. +|+   |.||.+|-+
T Consensus         4 R~g~a~vPMDEal~~v~vDlsgRp~~~~~~~~~~~~iG~~~~el~~hFf~s~a~~a~~tlHi~~~~G~---N~HHi~Ea~   80 (94)
T d1rhya2           4 RYGYAYAPLDESLSRAVIDISSRPYFMCHLPFTREKVGDLSTEMVSHLLQSFAFAAGVTLHIDSIRGE---NNHHIAESA   80 (94)
T ss_dssp             CEEEEEEEETTEEEEEEEECSSCCEEEEECCCCSSEETTEETHHHHHHHHHHHHHHTCEEEEEEEECS---SHHHHHHHH
T ss_pred             eeeccccchhhhhhheeeecCCceEEEEeCcccccccCCccchhHHHHHHHHHhhCCcEEEEEeccCC---ChHHHHHHH
Confidence            444444456799999999999988666555433          588999999999999999975 785   679999999


Q ss_pred             hhhHHHHHHHhcC
Q 029253          150 GLAIGTALLQALG  162 (196)
Q Consensus       150 GIaLGqAL~qALG  162 (196)
                      .=++|.||++|+.
T Consensus        81 FKa~grALr~A~~   93 (94)
T d1rhya2          81 FKALALAIRMAIS   93 (94)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999973

>d2ae8a2 d.14.1.9 (A:85-179) Imidazole glycerol phosphate dehydratase {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.15  E-value=2.9e-06  Score=62.67  Aligned_cols=78  Identities=21%  Similarity=0.284  Sum_probs=63.2

Q ss_pred             ceEEEEeeeCCeEEEEEEEeCCCceeeeecC----------CccHHHHHHHHHhhcCcceEEEE-ecCccccCCcchhhh
Q 029253           81 RIGEVKRVTKETNVSVKINVDGSGVADSSTC----------IPFLDHMLDQLASHGLFDVHVRA-TGDIHIDDHHTNEDV  149 (196)
Q Consensus        81 R~a~i~R~TkET~I~V~LnLDG~G~~~I~TG----------IgFlDHML~~~a~H~g~dL~I~A-~GDl~VDdHHtvEDv  149 (196)
                      |-+...=-=.|+-+.|.|||-|++-...+.+          .-.+.|.+..|+.++++.|.|+. .|+   |+||.+|-+
T Consensus         4 R~g~~~vPMDEal~~vavDlSGRpy~~~~~~~~~~~iG~~~~el~~hFf~sfa~~a~~tlHi~~~~G~---N~HHi~Ea~   80 (95)
T d2ae8a2           4 RYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGG---NTHHEIEAI   80 (95)
T ss_dssp             CEEEEEEEETTEEEEEEEECCSCCEEEEECCCSCSEETTEETTHHHHHHHHHHHHTTCEEEEEEEECS---CHHHHHHHH
T ss_pred             EEEcceechhheeeeEEEEcCCCCeeEecCCCCccccCCCCccchHHHHHHHHhcCccEEEEEEecCC---ChHHHHHHH
Confidence            4444344457999999999999876554433          23578999999999999999986 685   679999999


Q ss_pred             hhhHHHHHHHhc
Q 029253          150 GLAIGTALLQAL  161 (196)
Q Consensus       150 GIaLGqAL~qAL  161 (196)
                      --++|+||++|+
T Consensus        81 FKa~arALr~Av   92 (95)
T d2ae8a2          81 FKAFSRALGIAL   92 (95)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH
Confidence            999999999997

>d2f1da2 d.14.1.9 (A:96-192) Imidazole glycerol phosphate dehydratase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Imidazole glycerol phosphate dehydratase
domain: Imidazole glycerol phosphate dehydratase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.05  E-value=5.1e-06  Score=61.44  Aligned_cols=72  Identities=22%  Similarity=0.334  Sum_probs=59.6

Q ss_pred             eeCCeEEEEEEEeCCCceeeeecC----------CccHHHHHHHHHhhcCcceEEEE-ecCccccCCcchhhhhhhHHHH
Q 029253           88 VTKETNVSVKINVDGSGVADSSTC----------IPFLDHMLDQLASHGLFDVHVRA-TGDIHIDDHHTNEDVGLAIGTA  156 (196)
Q Consensus        88 ~TkET~I~V~LnLDG~G~~~I~TG----------IgFlDHML~~~a~H~g~dL~I~A-~GDl~VDdHHtvEDvGIaLGqA  156 (196)
                      -=-|+-+.+.|+|-|++-+..+-.          .-.+.|.+..|+.++++.|.|+. .|+   ++||.+|-+-=++|.|
T Consensus        11 PMDEal~~vavDlsGRpy~~~~~~~~~~~iG~~~~el~~hFf~sfa~~a~~tlHi~~~~G~---N~HH~~Ea~FKa~arA   87 (97)
T d2f1da2          11 PLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGE---NSHHIIEATFKAFARA   87 (97)
T ss_dssp             EETTEEEEEEEECCSSCEEEEECCCSSSEETTEETTHHHHHHHHHHHHHTCEEEEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred             chhhhhhheeeecCCCcceEEecccccccccCCCcchHHHHHHHHHhhCceEEEEEeeecC---ChHHHHHHHHHHHHHH
Confidence            346899999999999875433322          22588999999999999999974 886   6799999999999999


Q ss_pred             HHHhcC
Q 029253          157 LLQALG  162 (196)
Q Consensus       157 L~qALG  162 (196)
                      |++|+.
T Consensus        88 Lr~A~~   93 (97)
T d2f1da2          88 LRQATE   93 (97)
T ss_dssp             HHHHHS
T ss_pred             HHHHhc
Confidence            999974