Citrus Sinensis ID: 029377


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190----
MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEGEARIDAIGFMCAGLNIIMYASPLSAMVPNGTGFLLGTAQLVLYAIYRNAKPSKNAANSMEEGAQHEPLIIS
cHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccEEEEEEHHHHHHHHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccHHccHHHHHHHHHHHHHHHEEEccccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccHcccccccEEEc
MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRsteefqslPYICTLLNSslwtyygitrpgsyLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEGEARIDAIGFMCAGLNIIMyasplsamvpngtgfLLGTAQLVLYAIYRNakpsknaansmeegaqhepliis
MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRsteefqslpYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEGEARIDAIGFMCAGLNIIMYASPLSAMVPNGTGFLLGTAQLVLYAIYRNAKPsknaansmeegaqhepliis
MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEGEARIDAIGFMCAGLNIIMYASPLSAMVPNGTGFLLGTAQLVLYAIYRNAKPSKNAANSMEEGAQHEPLIIS
***LSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEGEARIDAIGFMCAGLNIIMYASPLSAMVPNGTGFLLGTAQLVLYAIYRN***********************
*KDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEGEARIDAIGFMCAGLNIIMYASPLSAMVPNGTGFLLGTAQLVLYAIY********************PLII*
MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEGEARIDAIGFMCAGLNIIMYASPLSAMVPNGTGFLLGTAQLVLYAIYRNAKPS*******************
*KDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEGEARIDAIGFMCAGLNIIMYASPLSAMVPNGTGFLLGTAQLVLYAIYRNAK*********************
oooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
ooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
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MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEGEARIDAIGFMCAGLNIIMYASPLSAMVPNGTGFLLGTAQLVLYAIYRNAKPSKNAANSMEEGAQHEPLIIS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query194 2.2.26 [Sep-21-2011]
Q84WN3241 Bidirectional sugar trans yes no 0.963 0.775 0.530 9e-58
Q9LUR4230 Bidirectional sugar trans no no 0.963 0.813 0.478 1e-50
Q10LN5328 Bidirectional sugar trans yes no 0.886 0.524 0.413 2e-35
A2WSD8259 Bidirectional sugar trans N/A no 0.902 0.675 0.374 2e-31
Q8LR09259 Bidirectional sugar trans yes no 0.902 0.675 0.374 2e-31
Q9FPN0265 Bidirectional sugar trans N/A no 0.927 0.679 0.326 7e-31
Q9FY94292 Bidirectional sugar trans no no 0.943 0.626 0.324 1e-30
A2YZ24266 Bidirectional sugar trans N/A no 0.881 0.642 0.351 5e-30
A2X5B4319 Bidirectional sugar trans N/A no 0.871 0.529 0.328 5e-30
Q6K602319 Bidirectional sugar trans yes no 0.871 0.529 0.328 6e-30
>sp|Q84WN3|SWT17_ARATH Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana GN=SWEET17 PE=2 SV=2 Back     alignment and function desciption
 Score =  223 bits (567), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 122/230 (53%), Positives = 146/230 (63%), Gaps = 43/230 (18%)

Query: 1   MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGIT 60
           M + SFY+GVIGN+ISVL+FL+PV TFW+I+K RSTEE++SLPYICTLL SSLWTYYGI 
Sbjct: 1   MAEASFYIGVIGNVISVLVFLSPVETFWKIVKRRSTEEYKSLPYICTLLGSSLWTYYGIV 60

Query: 61  RPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLA 120
            PG YLV+TVNGFG LVE +YV+LF  YAP + ++ KT  +  +L+V F  AAI ATR A
Sbjct: 61  TPGEYLVSTVNGFGALVETIYVSLFLFYAP-RHLKLKTVDVDAMLNVFFPIAAIVATRSA 119

Query: 121 LEGEA-RIDAIGFMCAGLNIIMYASPLSAM------------------------------ 149
            E E  R  +IGF+ AGLNIIMY SPLSAM                              
Sbjct: 120 FEDEKMRSQSIGFISAGLNIIMYGSPLSAMKTVVTTKSVKYMPFWLSFFLFLNGAIWAVY 179

Query: 150 ----------VPNGTGFLLGTAQLVLYAIYRNAKPSKNAANSMEEGAQHE 189
                     VPNG GF+ GT QL+LY IYRNAKP    +N + E AQ E
Sbjct: 180 ALLQHDVFLLVPNGVGFVFGTMQLILYGIYRNAKPV-GLSNGLSEIAQDE 228




Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9LUR4|SWT16_ARATH Bidirectional sugar transporter SWEET16 OS=Arabidopsis thaliana GN=SWEET16 PE=2 SV=1 Back     alignment and function description
>sp|Q10LN5|SWT16_ORYSJ Bidirectional sugar transporter SWEET16 OS=Oryza sativa subsp. japonica GN=SWEET16 PE=3 SV=1 Back     alignment and function description
>sp|A2WSD8|SWT6A_ORYSI Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. indica GN=SWEET6A PE=3 SV=1 Back     alignment and function description
>sp|Q8LR09|SWT6A_ORYSJ Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. japonica GN=SWEET6A PE=3 SV=1 Back     alignment and function description
>sp|Q9FPN0|NEC1_PETHY Bidirectional sugar transporter NEC1 OS=Petunia hybrida GN=NEC1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FY94|SWT15_ARATH Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana GN=SWEET15 PE=2 SV=1 Back     alignment and function description
>sp|A2YZ24|SWT7B_ORYSI Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. indica GN=SWEET7B PE=3 SV=1 Back     alignment and function description
>sp|A2X5B4|SWT15_ORYSI Bidirectional sugar transporter SWEET15 OS=Oryza sativa subsp. indica GN=SWEET15 PE=3 SV=1 Back     alignment and function description
>sp|Q6K602|SWT15_ORYSJ Bidirectional sugar transporter SWEET15 OS=Oryza sativa subsp. japonica GN=SWEET15 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query194
225431745233 PREDICTED: bidirectional sugar transport 0.984 0.819 0.598 2e-71
255551797244 conserved hypothetical protein [Ricinus 0.969 0.770 0.609 2e-70
224130420238 predicted protein [Populus trichocarpa] 0.994 0.810 0.632 2e-69
217072846246 unknown [Medicago truncatula] gi|3885230 0.994 0.784 0.572 9e-65
359807170245 uncharacterized protein LOC100776607 [Gl 0.974 0.771 0.581 1e-63
27754697241 putative cytochrome c oxidoreductase [Ar 0.963 0.775 0.530 5e-57
322967649241 RecName: Full=Bidirectional sugar transp 0.963 0.775 0.530 4e-56
240255890241 nodulin MtN3-like protein [Arabidopsis t 0.963 0.775 0.530 4e-56
297800580241 hypothetical protein ARALYDRAFT_493293 [ 0.963 0.775 0.513 1e-55
224123068238 predicted protein [Populus trichocarpa] 0.938 0.764 0.526 6e-55
>gi|225431745|ref|XP_002269234.1| PREDICTED: bidirectional sugar transporter SWEET17 [Vitis vinifera] gi|296083357|emb|CBI22993.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 140/234 (59%), Positives = 166/234 (70%), Gaps = 43/234 (18%)

Query: 1   MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGIT 60
           M+ LSF+ GVIGNIISVL+FLAP+ TFWRI+KHRST++F+SLPY+CTLLNSSLWTYYGI 
Sbjct: 1   MESLSFFAGVIGNIISVLVFLAPIGTFWRIVKHRSTQDFESLPYVCTLLNSSLWTYYGII 60

Query: 61  RPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLA 120
           +PG  LVATVNGFG++VEA YVTLF IYAP K MRAKT  +  +LDVGFL AAI  TRLA
Sbjct: 61  KPGEILVATVNGFGVVVEAAYVTLFLIYAPAK-MRAKTVALVSLLDVGFLAAAILVTRLA 119

Query: 121 LEGEARIDAIGFMCAGLNIIMYASPLSAM------------------------------- 149
           L+G+ RIDA+GF+C+GLNI+MY SPL+AM                               
Sbjct: 120 LQGDTRIDALGFICSGLNIVMYGSPLAAMKTVVTTKSVEFMPFFLSFFLFLNGGIWTIYA 179

Query: 150 ---------VPNGTGFLLGTAQLVLYAIYRNAKPSKNAANSMEEGAQHEPLIIS 194
                    VPNGTG +LGTAQLVLYAIYRN+KPS     S+E+G+Q E LI S
Sbjct: 180 VLVRDYFLAVPNGTGLVLGTAQLVLYAIYRNSKPSNKF--SIEDGSQEEHLIAS 231




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551797|ref|XP_002516944.1| conserved hypothetical protein [Ricinus communis] gi|223544032|gb|EEF45558.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224130420|ref|XP_002328604.1| predicted protein [Populus trichocarpa] gi|222838586|gb|EEE76951.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|217072846|gb|ACJ84783.1| unknown [Medicago truncatula] gi|388523097|gb|AFK49610.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|359807170|ref|NP_001241100.1| uncharacterized protein LOC100776607 [Glycine max] gi|255646128|gb|ACU23550.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|27754697|gb|AAO22792.1| putative cytochrome c oxidoreductase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|322967649|sp|Q84WN3.2|SWT17_ARATH RecName: Full=Bidirectional sugar transporter SWEET17; Short=AtSWEET17 Back     alignment and taxonomy information
>gi|240255890|ref|NP_193327.5| nodulin MtN3-like protein [Arabidopsis thaliana] gi|332658266|gb|AEE83666.1| nodulin MtN3-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297800580|ref|XP_002868174.1| hypothetical protein ARALYDRAFT_493293 [Arabidopsis lyrata subsp. lyrata] gi|297314010|gb|EFH44433.1| hypothetical protein ARALYDRAFT_493293 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224123068|ref|XP_002318986.1| predicted protein [Populus trichocarpa] gi|222857362|gb|EEE94909.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query194
TAIR|locus:2089363230 SWEET16 [Arabidopsis thaliana 0.757 0.639 0.609 2.9e-52
UNIPROTKB|Q10LN5 328 SWEET16 "Bidirectional sugar t 0.762 0.451 0.489 4.9e-37
UNIPROTKB|P93332268 N3 "Bidirectional sugar transp 0.737 0.533 0.423 3.5e-36
UNIPROTKB|Q9FPN0265 NEC1 "Bidirectional sugar tran 0.747 0.547 0.414 2.4e-35
TAIR|locus:2179867292 SAG29 "senescence-associated g 0.731 0.486 0.381 3.9e-35
UNIPROTKB|Q8RZQ8273 SWEET1A "Bidirectional sugar t 0.731 0.520 0.452 6.3e-35
UNIPROTKB|A2X5B4 319 SWEET15 "Bidirectional sugar t 0.731 0.445 0.377 1e-34
UNIPROTKB|Q6K602 319 SWEET15 "Bidirectional sugar t 0.731 0.445 0.377 1e-34
UNIPROTKB|A2YZ24266 SWEET7B "Bidirectional sugar t 0.721 0.526 0.420 9e-34
UNIPROTKB|B8AYH1261 SWEET1B "Bidirectional sugar t 0.762 0.567 0.414 9e-34
TAIR|locus:2089363 SWEET16 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 463 (168.0 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
 Identities = 92/151 (60%), Positives = 115/151 (76%)

Query:     1 MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGIT 60
             M DLSFYVGVIGN+ISVL+FL+PV TFWRI++ RSTEE++  PYICTL++SSLWTYYGI 
Sbjct:     1 MADLSFYVGVIGNVISVLVFLSPVETFWRIVQRRSTEEYECFPYICTLMSSSLWTYYGIV 60

Query:    61 RPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLA 120
              PG YLV+TVNGFG L E++YV +F  + P K+   KT ++   L+V F   AIA TR  
Sbjct:    61 TPGEYLVSTVNGFGALAESIYVLIFLFFVP-KSRFLKTVVVVLALNVCFPVIAIAGTR-T 118

Query:   121 LEGEA--RIDAIGFMCAGLNIIMYASPLSAM 149
             L G+A  R  ++GF+CA LNIIMY SPLSA+
Sbjct:   119 LFGDANSRSSSMGFICATLNIIMYGSPLSAI 149


GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0005887 "integral to plasma membrane" evidence=ISS
GO:0051119 "sugar transmembrane transporter activity" evidence=ISS
UNIPROTKB|Q10LN5 SWEET16 "Bidirectional sugar transporter SWEET16" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|P93332 N3 "Bidirectional sugar transporter N3" [Medicago truncatula (taxid:3880)] Back     alignment and assigned GO terms
UNIPROTKB|Q9FPN0 NEC1 "Bidirectional sugar transporter NEC1" [Petunia x hybrida (taxid:4102)] Back     alignment and assigned GO terms
TAIR|locus:2179867 SAG29 "senescence-associated gene 29" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8RZQ8 SWEET1A "Bidirectional sugar transporter SWEET1a" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A2X5B4 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|Q6K602 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|A2YZ24 SWEET7B "Bidirectional sugar transporter SWEET7b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms
UNIPROTKB|B8AYH1 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84WN3SWT17_ARATHNo assigned EC number0.53040.96390.7759yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query194
pfam0308387 pfam03083, MtN3_slv, Sugar efflux transporter for 4e-27
>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange Back     alignment and domain information
 Score = 98.0 bits (245), Expect = 4e-27
 Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 1/88 (1%)

Query: 6  FYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSY 65
          F +G++  + SV +FL+P+    ++IK +S E    LP++  LL++SLW  YG+ +   Y
Sbjct: 1  FLLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGY 60

Query: 66 LVATVNGFGILVEAVYVTLFFIYAPTKA 93
          ++   NG G ++  +Y+ LF IY P KA
Sbjct: 61 II-IPNGVGCVLGTIYLILFIIYPPKKA 87


This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 194
KOG1623243 consensus Multitransmembrane protein [General func 100.0
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 99.88
KOG1623243 consensus Multitransmembrane protein [General func 99.6
COG409589 Uncharacterized conserved protein [Function unknow 99.36
PF0308387 MtN3_slv: Sugar efflux transporter for intercellul 98.58
PF0419361 PQ-loop: PQ loop repeat 98.13
TIGR00951220 2A43 Lysosomal Cystine Transporter. 97.18
smart0067932 CTNS Repeated motif present between transmembrane 93.93
TIGR00951220 2A43 Lysosomal Cystine Transporter. 92.36
PF03650119 MPC: Uncharacterised protein family (UPF0041); Int 89.85
KOG1589118 consensus Uncharacterized conserved protein [Funct 88.17
KOG3211230 consensus Predicted endoplasmic reticulum membrane 83.99
KOG2913260 consensus Predicted membrane protein [Function unk 83.88
PHA02246192 hypothetical protein 81.89
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=8.3e-38  Score=258.19  Aligned_cols=173  Identities=44%  Similarity=0.790  Sum_probs=149.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCcCCccchhHHHHHHHHHHHHHHHhccCCCeeEEeehhHHHHHHHHH
Q 029377            2 KDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVY   81 (194)
Q Consensus         2 ~~~~~~~g~~~~i~ti~~~~SPl~~~~~i~k~kst~~~s~lp~~~~~~n~~lW~~YG~l~~~~~~v~~~N~~G~~l~~~~   81 (194)
                      +....++|..|+++++++|++|+|+++||+|+||+|++|+.||+++++||.+|+.||.+++||..++.+|.+|++++++|
T Consensus         3 ~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~d~llitIN~~G~~ie~~Y   82 (243)
T KOG1623|consen    3 NVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVHDYLLITINGIGLVIETVY   82 (243)
T ss_pred             chHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccCceEEEEEehhcHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999998875777889999999999999


Q ss_pred             HHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccC-ceeeeehhhhHHHHHHHHhHhhHHhh-----------
Q 029377           82 VTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEG-EARIDAIGFMCAGLNIIMYASPLSAM-----------  149 (194)
Q Consensus        82 l~~~~~y~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~G~~~~~~~i~~y~sPL~~l-----------  149 (194)
                      +..|+.|+++|+ +.+..   ....+.++++..+++....|+ +.+.+.+|.+|++++++||||||+.|           
T Consensus        83 i~~f~~ya~~k~-~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~  158 (243)
T KOG1623|consen   83 ISIFLYYAPKKK-TVKIV---LALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEY  158 (243)
T ss_pred             HHHHheecCchh-eeEee---ehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCceee
Confidence            999999999887 23221   112234445555566666788 78899999999999999999999998           


Q ss_pred             -----------------------------hhhhHHHHHhhhhhheeEEEcCCCCCCCc
Q 029377          150 -----------------------------VPNGTGFLLGTAQLVLYAIYRNAKPSKNA  178 (194)
Q Consensus       150 -----------------------------vPN~~g~~l~~~Ql~L~~iYp~~~~~~~~  178 (194)
                                                   +||++|..+|++||.||+.||+++.++..
T Consensus       159 mPf~Ls~a~fl~a~~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly~~y~~~~~~~~~  216 (243)
T KOG1623|consen  159 MPFPLSFALFLVAVQWLLYGLLIKDFFIAIPNVLGFLLGLIQLILYFKYPKTTEKIVP  216 (243)
T ss_pred             echHHHHHHHHHHHHHHHHHHHhcCeEEEcccHHHHHHHHHHHHHhhhcCCCcccccc
Confidence                                         89999999999999999999998854433



>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>KOG1623 consensus Multitransmembrane protein [General function prediction only] Back     alignment and domain information
>COG4095 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] Back     alignment and domain information
>PF04193 PQ-loop: PQ loop repeat Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins Back     alignment and domain information
>TIGR00951 2A43 Lysosomal Cystine Transporter Back     alignment and domain information
>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function Back     alignment and domain information
>KOG1589 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] Back     alignment and domain information
>KOG2913 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PHA02246 hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00