Citrus Sinensis ID: 029377
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 194 | ||||||
| 225431745 | 233 | PREDICTED: bidirectional sugar transport | 0.984 | 0.819 | 0.598 | 2e-71 | |
| 255551797 | 244 | conserved hypothetical protein [Ricinus | 0.969 | 0.770 | 0.609 | 2e-70 | |
| 224130420 | 238 | predicted protein [Populus trichocarpa] | 0.994 | 0.810 | 0.632 | 2e-69 | |
| 217072846 | 246 | unknown [Medicago truncatula] gi|3885230 | 0.994 | 0.784 | 0.572 | 9e-65 | |
| 359807170 | 245 | uncharacterized protein LOC100776607 [Gl | 0.974 | 0.771 | 0.581 | 1e-63 | |
| 27754697 | 241 | putative cytochrome c oxidoreductase [Ar | 0.963 | 0.775 | 0.530 | 5e-57 | |
| 322967649 | 241 | RecName: Full=Bidirectional sugar transp | 0.963 | 0.775 | 0.530 | 4e-56 | |
| 240255890 | 241 | nodulin MtN3-like protein [Arabidopsis t | 0.963 | 0.775 | 0.530 | 4e-56 | |
| 297800580 | 241 | hypothetical protein ARALYDRAFT_493293 [ | 0.963 | 0.775 | 0.513 | 1e-55 | |
| 224123068 | 238 | predicted protein [Populus trichocarpa] | 0.938 | 0.764 | 0.526 | 6e-55 |
| >gi|225431745|ref|XP_002269234.1| PREDICTED: bidirectional sugar transporter SWEET17 [Vitis vinifera] gi|296083357|emb|CBI22993.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/234 (59%), Positives = 166/234 (70%), Gaps = 43/234 (18%)
Query: 1 MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGIT 60
M+ LSF+ GVIGNIISVL+FLAP+ TFWRI+KHRST++F+SLPY+CTLLNSSLWTYYGI
Sbjct: 1 MESLSFFAGVIGNIISVLVFLAPIGTFWRIVKHRSTQDFESLPYVCTLLNSSLWTYYGII 60
Query: 61 RPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLA 120
+PG LVATVNGFG++VEA YVTLF IYAP K MRAKT + +LDVGFL AAI TRLA
Sbjct: 61 KPGEILVATVNGFGVVVEAAYVTLFLIYAPAK-MRAKTVALVSLLDVGFLAAAILVTRLA 119
Query: 121 LEGEARIDAIGFMCAGLNIIMYASPLSAM------------------------------- 149
L+G+ RIDA+GF+C+GLNI+MY SPL+AM
Sbjct: 120 LQGDTRIDALGFICSGLNIVMYGSPLAAMKTVVTTKSVEFMPFFLSFFLFLNGGIWTIYA 179
Query: 150 ---------VPNGTGFLLGTAQLVLYAIYRNAKPSKNAANSMEEGAQHEPLIIS 194
VPNGTG +LGTAQLVLYAIYRN+KPS S+E+G+Q E LI S
Sbjct: 180 VLVRDYFLAVPNGTGLVLGTAQLVLYAIYRNSKPSNKF--SIEDGSQEEHLIAS 231
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551797|ref|XP_002516944.1| conserved hypothetical protein [Ricinus communis] gi|223544032|gb|EEF45558.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224130420|ref|XP_002328604.1| predicted protein [Populus trichocarpa] gi|222838586|gb|EEE76951.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|217072846|gb|ACJ84783.1| unknown [Medicago truncatula] gi|388523097|gb|AFK49610.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|359807170|ref|NP_001241100.1| uncharacterized protein LOC100776607 [Glycine max] gi|255646128|gb|ACU23550.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|27754697|gb|AAO22792.1| putative cytochrome c oxidoreductase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|322967649|sp|Q84WN3.2|SWT17_ARATH RecName: Full=Bidirectional sugar transporter SWEET17; Short=AtSWEET17 | Back alignment and taxonomy information |
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| >gi|240255890|ref|NP_193327.5| nodulin MtN3-like protein [Arabidopsis thaliana] gi|332658266|gb|AEE83666.1| nodulin MtN3-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297800580|ref|XP_002868174.1| hypothetical protein ARALYDRAFT_493293 [Arabidopsis lyrata subsp. lyrata] gi|297314010|gb|EFH44433.1| hypothetical protein ARALYDRAFT_493293 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|224123068|ref|XP_002318986.1| predicted protein [Populus trichocarpa] gi|222857362|gb|EEE94909.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 194 | ||||||
| TAIR|locus:2089363 | 230 | SWEET16 [Arabidopsis thaliana | 0.757 | 0.639 | 0.609 | 2.9e-52 | |
| UNIPROTKB|Q10LN5 | 328 | SWEET16 "Bidirectional sugar t | 0.762 | 0.451 | 0.489 | 4.9e-37 | |
| UNIPROTKB|P93332 | 268 | N3 "Bidirectional sugar transp | 0.737 | 0.533 | 0.423 | 3.5e-36 | |
| UNIPROTKB|Q9FPN0 | 265 | NEC1 "Bidirectional sugar tran | 0.747 | 0.547 | 0.414 | 2.4e-35 | |
| TAIR|locus:2179867 | 292 | SAG29 "senescence-associated g | 0.731 | 0.486 | 0.381 | 3.9e-35 | |
| UNIPROTKB|Q8RZQ8 | 273 | SWEET1A "Bidirectional sugar t | 0.731 | 0.520 | 0.452 | 6.3e-35 | |
| UNIPROTKB|A2X5B4 | 319 | SWEET15 "Bidirectional sugar t | 0.731 | 0.445 | 0.377 | 1e-34 | |
| UNIPROTKB|Q6K602 | 319 | SWEET15 "Bidirectional sugar t | 0.731 | 0.445 | 0.377 | 1e-34 | |
| UNIPROTKB|A2YZ24 | 266 | SWEET7B "Bidirectional sugar t | 0.721 | 0.526 | 0.420 | 9e-34 | |
| UNIPROTKB|B8AYH1 | 261 | SWEET1B "Bidirectional sugar t | 0.762 | 0.567 | 0.414 | 9e-34 |
| TAIR|locus:2089363 SWEET16 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 463 (168.0 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 92/151 (60%), Positives = 115/151 (76%)
Query: 1 MKDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGIT 60
M DLSFYVGVIGN+ISVL+FL+PV TFWRI++ RSTEE++ PYICTL++SSLWTYYGI
Sbjct: 1 MADLSFYVGVIGNVISVLVFLSPVETFWRIVQRRSTEEYECFPYICTLMSSSLWTYYGIV 60
Query: 61 RPGSYLVATVNGFGILVEAVYVTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLA 120
PG YLV+TVNGFG L E++YV +F + P K+ KT ++ L+V F AIA TR
Sbjct: 61 TPGEYLVSTVNGFGALAESIYVLIFLFFVP-KSRFLKTVVVVLALNVCFPVIAIAGTR-T 118
Query: 121 LEGEA--RIDAIGFMCAGLNIIMYASPLSAM 149
L G+A R ++GF+CA LNIIMY SPLSA+
Sbjct: 119 LFGDANSRSSSMGFICATLNIIMYGSPLSAI 149
|
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| UNIPROTKB|Q10LN5 SWEET16 "Bidirectional sugar transporter SWEET16" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P93332 N3 "Bidirectional sugar transporter N3" [Medicago truncatula (taxid:3880)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9FPN0 NEC1 "Bidirectional sugar transporter NEC1" [Petunia x hybrida (taxid:4102)] | Back alignment and assigned GO terms |
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| TAIR|locus:2179867 SAG29 "senescence-associated gene 29" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q8RZQ8 SWEET1A "Bidirectional sugar transporter SWEET1a" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2X5B4 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6K602 SWEET15 "Bidirectional sugar transporter SWEET15" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A2YZ24 SWEET7B "Bidirectional sugar transporter SWEET7b" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B8AYH1 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 194 | |||
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 4e-27 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
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Score = 98.0 bits (245), Expect = 4e-27
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 6 FYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSY 65
F +G++ + SV +FL+P+ ++IK +S E LP++ LL++SLW YG+ + Y
Sbjct: 1 FLLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGY 60
Query: 66 LVATVNGFGILVEAVYVTLFFIYAPTKA 93
++ NG G ++ +Y+ LF IY P KA
Sbjct: 61 II-IPNGVGCVLGTIYLILFIIYPPKKA 87
|
This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 194 | |||
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 100.0 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.88 | |
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 99.6 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.36 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 98.58 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 98.13 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 97.18 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 93.93 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 92.36 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 89.85 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 88.17 | |
| KOG3211 | 230 | consensus Predicted endoplasmic reticulum membrane | 83.99 | |
| KOG2913 | 260 | consensus Predicted membrane protein [Function unk | 83.88 | |
| PHA02246 | 192 | hypothetical protein | 81.89 |
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
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Probab=100.00 E-value=8.3e-38 Score=258.19 Aligned_cols=173 Identities=44% Similarity=0.790 Sum_probs=149.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCcCCccchhHHHHHHHHHHHHHHHhccCCCeeEEeehhHHHHHHHHH
Q 029377 2 KDLSFYVGVIGNIISVLMFLAPVRTFWRIIKHRSTEEFQSLPYICTLLNSSLWTYYGITRPGSYLVATVNGFGILVEAVY 81 (194)
Q Consensus 2 ~~~~~~~g~~~~i~ti~~~~SPl~~~~~i~k~kst~~~s~lp~~~~~~n~~lW~~YG~l~~~~~~v~~~N~~G~~l~~~~ 81 (194)
+....++|..|+++++++|++|+|+++||+|+||+|++|+.||+++++||.+|+.||.+++||..++.+|.+|++++++|
T Consensus 3 ~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~d~llitIN~~G~~ie~~Y 82 (243)
T KOG1623|consen 3 NVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVHDYLLITINGIGLVIETVY 82 (243)
T ss_pred chHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccCceEEEEEehhcHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999998875777889999999999999
Q ss_pred HHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccC-ceeeeehhhhHHHHHHHHhHhhHHhh-----------
Q 029377 82 VTLFFIYAPTKAMRAKTAIIFGILDVGFLGAAIAATRLALEG-EARIDAIGFMCAGLNIIMYASPLSAM----------- 149 (194)
Q Consensus 82 l~~~~~y~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~G~~~~~~~i~~y~sPL~~l----------- 149 (194)
+..|+.|+++|+ +.+.. ....+.++++..+++....|+ +.+.+.+|.+|++++++||||||+.|
T Consensus 83 i~~f~~ya~~k~-~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~ 158 (243)
T KOG1623|consen 83 ISIFLYYAPKKK-TVKIV---LALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEY 158 (243)
T ss_pred HHHHheecCchh-eeEee---ehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCceee
Confidence 999999999887 23221 112234445555566666788 78899999999999999999999998
Q ss_pred -----------------------------hhhhHHHHHhhhhhheeEEEcCCCCCCCc
Q 029377 150 -----------------------------VPNGTGFLLGTAQLVLYAIYRNAKPSKNA 178 (194)
Q Consensus 150 -----------------------------vPN~~g~~l~~~Ql~L~~iYp~~~~~~~~ 178 (194)
+||++|..+|++||.||+.||+++.++..
T Consensus 159 mPf~Ls~a~fl~a~~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly~~y~~~~~~~~~ 216 (243)
T KOG1623|consen 159 MPFPLSFALFLVAVQWLLYGLLIKDFFIAIPNVLGFLLGLIQLILYFKYPKTTEKIVP 216 (243)
T ss_pred echHHHHHHHHHHHHHHHHHHHhcCeEEEcccHHHHHHHHHHHHHhhhcCCCcccccc
Confidence 89999999999999999999998854433
|
|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
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| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
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| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
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| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
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| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
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| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
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| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
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| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] | Back alignment and domain information |
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| >KOG2913 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
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| >PHA02246 hypothetical protein | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00