Citrus Sinensis ID: 029399

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190----
Protein Sequence
MVMAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQKNGYLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLSTGMKKISITSPITITFQTLST
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccccccccEEEcccccccEEEccccccEEEcccccEEEEcccccHHHHHHHHHHHcccccccEEEcccccccEEEcEEEEEcccccccccccHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHccccccccccccccccccccEEcccccEEEEccccEEEEEcccccHHHHHHHHHHHcHHHcccEEEccccccEEEccEEcccccEccccccccHHHHHHHHHHHHHcccccccccHHEEEEcccccccccccEEEEHHHccc
Coil and Loop (DISEMBL)
MVMAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLedsygtdfpsfmrrqkngylqlprgvtfwdndKEAELLRLgyvkpeviswsprILVLHNFLSMEECDYLRAIArphlqvstvvdtktgkgiksnvrtssgmflspeekkypMIQAIEKRISVfsqvpvengELIQVLSTGmkkisitspititfqtlst
Flexible Loop (DISEMBL)
MVMAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQKNGYLQLPRGVTFWDNDKEAELLRLGyvkpeviswsPRILVLHNFLSMEECDYLRAIARPhlqvstvvdtktgkgiksnvrtssgmflspeEKKYPMIQAIEKRISVFSQVPVENGELIQVLStgmkkisitspititfqtlst
Low Complexity Region (SEG)
MVMAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQKNGYLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLSTGMKKisitspititFQTLST
Disordered region (IsUnstruct)
******MKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQKNGYLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTG*********************YPMIQAIEKRISVFSQVPVENGELIQVLSTGMKKISITSPITITF*****
Disordered Region (DISOPRED)
*****SM**VFGLLTFVTFGMIIGALFQLAFI******************************FWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIAR***************GIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLSTGMKKISITSPITITFQTLS*
Disordered Region (DISEMBL)
MVMAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQKNGYLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLSTGMKKISITSPITITFQTLST
Disordered Region (DISPRO)
***APSMKIVFGLLTFVTFGMIIGALFQLAFIRK*******DFPSFM***KNG*LQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLSTGMKKISITSPITITFQTLST
Transmembrane Helix (TMHMM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVMAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQKNGYLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLSTGMKKISITSPITITFQTLST
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	194	2.2.26 [Sep-21-2011]
Q60716	537	Prolyl 4-hydroxylase subu	yes	no	0.458	0.165	0.329	1e-06
P16924	516	Prolyl 4-hydroxylase subu	yes	no	0.618	0.232	0.302	2e-06
Q5ZLK5	534	Prolyl 4-hydroxylase subu	no	no	0.618	0.224	0.294	2e-06
O15460	535	Prolyl 4-hydroxylase subu	yes	no	0.458	0.166	0.318	5e-06
P54001	534	Prolyl 4-hydroxylase subu	no	no	0.453	0.164	0.322	6e-06
Q20065	539	Prolyl 4-hydroxylase subu	yes	no	0.551	0.198	0.247	6e-05
Q10576	559	Prolyl 4-hydroxylase subu	no	no	0.5	0.173	0.252	0.0001
Q1RMU3	534	Prolyl 4-hydroxylase subu	no	no	0.453	0.164	0.288	0.0008
Q5RAG8	534	Prolyl 4-hydroxylase subu	no	no	0.453	0.164	0.288	0.0009
P13674	534	Prolyl 4-hydroxylase subu	no	no	0.453	0.164	0.288	0.0009

>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 86  SPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKY 145
           SP I+  ++ +S EE + ++ IA+P L  +TV D KTG    ++ R S   +L  EE   
Sbjct: 337 SPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDD 394

Query: 146 PMIQAIEKRISVFSQVPVENGELIQVLSTGM 176
           P++  + +R+   + + V+  EL+QV + GM
Sbjct: 395 PVVARVNRRMQHITGLTVKTAELLQVANYGM 425

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.
Mus musculus (taxid: 10090)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 2

>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 9/129 (6%)

Query: 48  RRQKNGYLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAI 107
           RRQK  + +      ++D ++    + LG VK E     PRI+   + +S EE + ++ +
Sbjct: 285 RRQKRLFCR------YYDGNRNPRYI-LGPVKQEDEWDKPRIVRFLDIISDEEIETVKEL 337

Query: 108 ARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGE 167
           A+P L  +TV D +TGK   ++ R S   +LS  E   P++  I  RI   + + V   E
Sbjct: 338 AKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYES--PVVSRINTRIQDLTGLDVSTAE 395

Query: 168 LIQVLSTGM 176
            +QV + G+
Sbjct: 396 ELQVANYGV 404

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1

 Score = 52.8 bits (125), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 9/129 (6%)

Query: 48  RRQKNGYLQLPRGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAI 107
           RRQK  + +      + D ++   LL +   K E    SP I+  ++ +S EE + ++ +
Sbjct: 305 RRQKRLFCR------YHDGNRNPHLL-IAPFKEEDEWDSPHIVRYYDVMSDEEIEKIKQL 357

Query: 108 ARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGE 167
           A+P L  +TV D KTG    ++ R S   +L  EE   P++  + +R+   + + V+  E
Sbjct: 358 AKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDDPVVAKVNQRMQQITGLTVKTAE 415

Query: 168 LIQVLSTGM 176
           L+QV + GM
Sbjct: 416 LLQVANYGM 424

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1

 Score = 51.2 bits (121), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 86  SPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKY 145
           SP I+  ++ +S EE + ++ IA+P L  +TV D KTG    ++ R S   +L  EE   
Sbjct: 335 SPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWL--EEDDD 392

Query: 146 PMIQAIEKRISVFSQVPVENGELIQVLSTGM 176
           P++  + +R+   + + V+  EL+QV + G+
Sbjct: 393 PVVARVNRRMQHITGLTVKTAELLQVANYGV 423

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2

 Score = 50.4 bits (119), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 87  PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP 146
           PRI+  H+ +S  E + ++ +A+P L  +TV D +TGK   +  R S   +LS  E   P
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYED--P 392

Query: 147 MIQAIEKRISVFSQVPVENGELIQVLSTGM 176
           ++  I  RI   + + V   E +QV + G+
Sbjct: 393 VVSRINMRIQDLTGLDVSTAEELQVANYGV 422

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 68  KEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIK 127
           ++   L+L  +K E++ + P  ++  N +   E + ++ +A P L+ +TV ++KTG+   
Sbjct: 306 RDKPFLKLAPIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEH 365

Query: 128 SNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLSTGM 176
           +  R S   +L  +    P+I  + +RI  F+ +     E +QV + G+
Sbjct: 366 ATYRISKSAWLKGDLD--PVIDRVNRRIEDFTNLNQATSEELQVANYGL 412

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans GN=dpy-18 PE=1 SV=2

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 78  VKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMF 137
           +K E+  ++P  ++  + +S +E   ++ +A+P L  +TV D+ TGK + +  R S   +
Sbjct: 319 IKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAW 378

Query: 138 LSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLSTGM 176
           L  +E +  +++ + KRI   + + +E  E +Q+ + G+
Sbjct: 379 L--KEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGI 415

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1

 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 87  PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP 146
           PRI+  H+ +S  E + ++ +A+P L+ +T+ +  TG     + R S   +LS  E   P
Sbjct: 335 PRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYEN--P 392

Query: 147 MIQAIEKRISVFSQVPVENGELIQVLSTGM 176
           ++  I  RI   + + V   E +QV + G+
Sbjct: 393 VVSRINMRIQDLTGLDVSTAEELQVANYGV 422

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 87  PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP 146
           PRI+  H+ +S  E + ++ +A+P L+ +T+ +  TG     + R S   +LS  E   P
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYEN--P 392

Query: 147 MIQAIEKRISVFSQVPVENGELIQVLSTGM 176
           ++  I  RI   + + V   E +QV + G+
Sbjct: 393 VVSRINMRIQDLTGLDVSTAEELQVANYGV 422

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2

 Score = 43.5 bits (101), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 87  PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP 146
           PRI+  H+ +S  E + ++ +A+P L+ +T+ +  TG     + R S   +LS  E   P
Sbjct: 335 PRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYEN--P 392

Query: 147 MIQAIEKRISVFSQVPVENGELIQVLSTGM 176
           ++  I  RI   + + V   E +QV + G+
Sbjct: 393 VVSRINMRIQDLTGLDVSTAEELQVANYGV 422

Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	194
255641158	195	unknown [Glycine max]	0.989	0.984	0.733	6e-80
363814557	238	uncharacterized protein LOC100794585 [Gl	0.876	0.714	0.763	6e-73
356576923	287	PREDICTED: prolyl 4-hydroxylase subunit	0.876	0.592	0.757	1e-72
224069056	287	predicted protein [Populus trichocarpa]	0.876	0.592	0.763	2e-72
255637879	287	unknown [Glycine max]	0.876	0.592	0.763	2e-72
15224220	283	P4H isoform 1 [Arabidopsis thaliana] gi|	0.860	0.590	0.744	6e-67
449468746	290	PREDICTED: putative prolyl 4-hydroxylase	0.881	0.589	0.718	3e-65
297824279	283	AT-P4H-1 [Arabidopsis lyrata subsp. lyra	0.860	0.590	0.726	1e-64
225433714	287	PREDICTED: prolyl 4-hydroxylase subunit	0.876	0.592	0.664	1e-61
357445147	281	Prolyl 4-hydroxylase subunit alpha-1 [Me	0.835	0.576	0.705	3e-61

>gi|255641158|gb|ACU20856.1| unknown [Glycine max]

 Score =  301 bits (772), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 143/195 (73%), Positives = 171/195 (87%), Gaps = 3/195 (1%)

Query: 3   MAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQ---KNGYLQLPR 59
           MAP+M+IVFGLLTFVT GMIIGAL QLA IR+LEDS+GTD   F R +    + +LQLPR
Sbjct: 1   MAPAMRIVFGLLTFVTVGMIIGALSQLAIIRRLEDSHGTDSLPFSRLRGLDTDRHLQLPR 60

Query: 60  GVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVD 119
           G+ FW+NDKEAE+LRLGYVKPEV++WSPRI++LHNFLSMEECDYLRAIA P L +S VVD
Sbjct: 61  GIPFWNNDKEAEVLRLGYVKPEVLNWSPRIILLHNFLSMEECDYLRAIALPRLHISNVVD 120

Query: 120 TKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLSTGMKKI 179
           TKTGKGIKS+VRTSSGMFL+P+E+KYPM+QAIEKRISV+SQ+P+ENGEL+QVLSTG ++I
Sbjct: 121 TKTGKGIKSDVRTSSGMFLNPQERKYPMVQAIEKRISVYSQIPIENGELMQVLSTGTRRI 180

Query: 180 SITSPITITFQTLST 194
           +IT+PI   F  LST
Sbjct: 181 NITNPIMTIFLILST 195

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814557|ref|NP_001242754.1| uncharacterized protein LOC100794585 [Glycine max] gi|255628535|gb|ACU14612.1| unknown [Glycine max]

 Score =  278 bits (712), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 132/173 (76%), Positives = 155/173 (89%), Gaps = 3/173 (1%)

Query: 3   MAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQ---KNGYLQLPR 59
           MAP+M+IVFGLLTFVT GMIIGAL QLA IR+LEDSYGTD   F R +    + +LQLPR
Sbjct: 1   MAPAMRIVFGLLTFVTVGMIIGALSQLAIIRRLEDSYGTDSLPFRRLRGLDTDRHLQLPR 60

Query: 60  GVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVD 119
           GV FW+NDKEAE+LRLGYVKPEV++WSPRI++LHNFLSMEECDYLRA+A P L +STVVD
Sbjct: 61  GVPFWNNDKEAEILRLGYVKPEVLNWSPRIILLHNFLSMEECDYLRALALPRLHISTVVD 120

Query: 120 TKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
           TKTGKGIKS+VRTSSGMFL+ +E+KYPM+QAIEKRISV+SQ+P+ENGEL+QVL
Sbjct: 121 TKTGKGIKSDVRTSSGMFLNSKERKYPMVQAIEKRISVYSQIPIENGELMQVL 173

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576923|ref|XP_003556579.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-1-like [Glycine max]

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 131/173 (75%), Positives = 155/173 (89%), Gaps = 3/173 (1%)

Query: 3   MAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQ---KNGYLQLPR 59
           MAP+M+IVFGLLTFVT GMIIGAL QLA IR+LEDS+GTD   F R +    + +LQLPR
Sbjct: 1   MAPAMRIVFGLLTFVTVGMIIGALSQLAIIRRLEDSHGTDSLPFSRLRGLDTDRHLQLPR 60

Query: 60  GVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVD 119
           G+ FW+NDKEAE+LRLGYVKPEV++WSPRI++LHNFLSMEECDYLRAIA P L +S VVD
Sbjct: 61  GIPFWNNDKEAEVLRLGYVKPEVLNWSPRIILLHNFLSMEECDYLRAIALPRLHISNVVD 120

Query: 120 TKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
           TKTGKGIKS+VRTSSGMFL+P+E+KYPM+QAIEKRISV+SQ+P+ENGEL+QVL
Sbjct: 121 TKTGKGIKSDVRTSSGMFLNPQERKYPMVQAIEKRISVYSQIPIENGELMQVL 173

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069056|ref|XP_002302889.1| predicted protein [Populus trichocarpa] gi|222844615|gb|EEE82162.1| predicted protein [Populus trichocarpa]

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 132/173 (76%), Positives = 151/173 (87%), Gaps = 3/173 (1%)

Query: 3   MAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQK---NGYLQLPR 59
           MA SMKIVFGLL FVT GMI+GA FQLAFI KLEDSYGT FPSF R +K   + YLQLPR
Sbjct: 1   MASSMKIVFGLLAFVTAGMIVGAFFQLAFILKLEDSYGTKFPSFKRVRKLQSDAYLQLPR 60

Query: 60  GVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVD 119
           G++ WDND EA +LR+GYVKPE+ISWSPRI+VLH+FLS EECDYLRA+A+P L++STVVD
Sbjct: 61  GISHWDNDTEAAVLRIGYVKPEIISWSPRIIVLHDFLSSEECDYLRALAKPRLRISTVVD 120

Query: 120 TKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
            KTGKGI+S VRTSSGMFLS EEK Y ++QAIEKRISV+SQVP+ENGELIQVL
Sbjct: 121 VKTGKGIESKVRTSSGMFLSSEEKTYQVVQAIEKRISVYSQVPIENGELIQVL 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637879|gb|ACU19258.1| unknown [Glycine max]

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 132/173 (76%), Positives = 155/173 (89%), Gaps = 3/173 (1%)

Query: 3   MAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQ---KNGYLQLPR 59
           MAP+M+IVFGLLTFVT GMIIGAL QLA IR+LEDSYGTD   F R +    + +LQLPR
Sbjct: 1   MAPAMRIVFGLLTFVTVGMIIGALSQLAIIRRLEDSYGTDSLPFRRLRGLDTDRHLQLPR 60

Query: 60  GVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVD 119
           GV FW+NDKEAE+LRLGYVKPEV++WSPRI++LHNFLSMEECDYLRA+A P L +STVVD
Sbjct: 61  GVPFWNNDKEAEILRLGYVKPEVLNWSPRIILLHNFLSMEECDYLRALALPRLHISTVVD 120

Query: 120 TKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
           TKTGKGIKS+VRTSSGMFL+ +E+KYPM+QAIEKRISV+SQ+P+ENGEL+QVL
Sbjct: 121 TKTGKGIKSDVRTSSGMFLNSKERKYPMVQAIEKRISVYSQIPIENGELMQVL 173

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15224220|ref|NP_181836.1| P4H isoform 1 [Arabidopsis thaliana] gi|3763917|gb|AAC64297.1| hypothetical protein [Arabidopsis thaliana] gi|20197628|gb|AAM15158.1| hypothetical protein [Arabidopsis thaliana] gi|26450452|dbj|BAC42340.1| unknown protein [Arabidopsis thaliana] gi|29824245|gb|AAP04083.1| unknown protein [Arabidopsis thaliana] gi|330255112|gb|AEC10206.1| P4H isoform 1 [Arabidopsis thaliana]

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 128/172 (74%), Positives = 147/172 (85%), Gaps = 5/172 (2%)

Query: 3   MAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSF--MRRQKNGYLQLPRG 60
           MAP+MKIVFGLLTFVT GM+IG+L QLAFI +LEDSYGT FPS   +R Q   YL   R 
Sbjct: 1   MAPAMKIVFGLLTFVTVGMVIGSLLQLAFINRLEDSYGTGFPSLRGLRGQNTRYL---RD 57

Query: 61  VTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDT 120
           V+ W NDK+AELLR+G VKPEV+SWSPRI+VLH+FLS EEC+YL+AIARP LQVSTVVD 
Sbjct: 58  VSRWANDKDAELLRIGNVKPEVVSWSPRIIVLHDFLSPEECEYLKAIARPRLQVSTVVDV 117

Query: 121 KTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
           KTGKG+KS+VRTSSGMFL+  E+ YP+IQAIEKRI+VFSQVP ENGELIQVL
Sbjct: 118 KTGKGVKSDVRTSSGMFLTHVERSYPIIQAIEKRIAVFSQVPAENGELIQVL 169

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449468746|ref|XP_004152082.1| PREDICTED: putative prolyl 4-hydroxylase-like [Cucumis sativus]

 Score =  253 bits (645), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 125/174 (71%), Positives = 144/174 (82%), Gaps = 3/174 (1%)

Query: 2   VMAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQKNGY---LQLP 58
           +++  M+IVFGLLTFVT GMIIGAL QLAF+R+LEDS GT+F    R  K  Y    QLP
Sbjct: 1   MVSSQMRIVFGLLTFVTVGMIIGALLQLAFLRRLEDSIGTEFLPAGRLHKAQYDSQHQLP 60

Query: 59  RGVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVV 118
           RG   W NDKEAE+LRLGYVKPEV+SWSPRI+VLHNFLS +ECDYL+ IA   L++STVV
Sbjct: 61  RGFPNWINDKEAEILRLGYVKPEVVSWSPRIIVLHNFLSTKECDYLKGIALARLEISTVV 120

Query: 119 DTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
           DTKTGKG+KS+ RTSSGMFLS  EK +PM+QAIEKRISV+SQVPVENGELIQVL
Sbjct: 121 DTKTGKGVKSDFRTSSGMFLSHHEKNFPMVQAIEKRISVYSQVPVENGELIQVL 174

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824279|ref|XP_002880022.1| AT-P4H-1 [Arabidopsis lyrata subsp. lyrata] gi|297325861|gb|EFH56281.1| AT-P4H-1 [Arabidopsis lyrata subsp. lyrata]

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 125/172 (72%), Positives = 144/172 (83%), Gaps = 5/172 (2%)

Query: 3   MAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSF--MRRQKNGYLQLPRG 60
           MAP+MKIVFGLLTFVT GM+I +L QLAFI +LEDSYG  FPS   +R Q   YL   R 
Sbjct: 1   MAPAMKIVFGLLTFVTVGMVIASLLQLAFINRLEDSYGPGFPSLRGLRGQNTRYL---RD 57

Query: 61  VTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDT 120
           V+ W NDK+AELLR+G VKPEV+SWSPRI+VLH+FLS EEC+YL+AIARP LQVSTVVD 
Sbjct: 58  VSRWANDKDAELLRIGNVKPEVVSWSPRIIVLHDFLSPEECEYLKAIARPRLQVSTVVDV 117

Query: 121 KTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
           KTGKG+KS+VRTSSGMFL+  E+  P+IQAIEKRI+VFSQVP ENGELIQVL
Sbjct: 118 KTGKGVKSDVRTSSGMFLTHVERSNPIIQAIEKRIAVFSQVPAENGELIQVL 169

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433714|ref|XP_002268409.1| PREDICTED: prolyl 4-hydroxylase subunit alpha-1 [Vitis vinifera] gi|296089634|emb|CBI39453.3| unnamed protein product [Vitis vinifera]

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 115/173 (66%), Positives = 142/173 (82%), Gaps = 3/173 (1%)

Query: 3   MAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSF---MRRQKNGYLQLPR 59
           MA  MK V GLL  V+FGMI GAL QL FI  LE+  G  FPSF    +RQ +G LQL  
Sbjct: 1   MAAPMKFVIGLLALVSFGMIFGALLQLEFIGGLEEVDGKAFPSFRKVHKRQNDGSLQLHG 60

Query: 60  GVTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVD 119
           G++ W NDK+A++LR+GYVKPE+++WSPRI++LH+FLS EECDYLRA+A P LQ+STVVD
Sbjct: 61  GISQWVNDKDADILRIGYVKPEILNWSPRIILLHSFLSSEECDYLRAMAEPLLQISTVVD 120

Query: 120 TKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
            +TGKGI+S+VRTSSGMFLSP++  YP+++AIEKRISV+SQVPVENGELIQVL
Sbjct: 121 AQTGKGIQSDVRTSSGMFLSPDDSTYPIVRAIEKRISVYSQVPVENGELIQVL 173

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445147|ref|XP_003592851.1| Prolyl 4-hydroxylase subunit alpha-1 [Medicago truncatula] gi|355481899|gb|AES63102.1| Prolyl 4-hydroxylase subunit alpha-1 [Medicago truncatula]

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 120/170 (70%), Positives = 139/170 (81%), Gaps = 8/170 (4%)

Query: 5   PSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSFMRRQKNGYLQLPRGVTFW 64
           P+MKIVFGLLTFVT GMIIGAL QLAFIR+LE        +  R        LPRG T+W
Sbjct: 4   PAMKIVFGLLTFVTIGMIIGALSQLAFIRRLELEEPFTTTTTTRSL------LPRGYTYW 57

Query: 65  DN--DKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKT 122
           +N  DKEA++LRLGYVKPEV+SWSPRI++LHNFLS EECDYLR +A P L++STVVD  T
Sbjct: 58  NNNNDKEAQILRLGYVKPEVLSWSPRIILLHNFLSYEECDYLRGVALPRLKISTVVDANT 117

Query: 123 GKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
           GKGIKS+VRTSSGMFLS EE+KYPMI AIEKRISV+SQ+P+ENGEL+QVL
Sbjct: 118 GKGIKSDVRTSSGMFLSHEERKYPMIHAIEKRISVYSQIPIENGELMQVL 167

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	194
TAIR|locus:2041001	283	AT-P4H-1 "P4H isoform 1" [Arab	0.860	0.590	0.744	1.8e-62
TAIR|locus:2156852	289	AT5G66060 [Arabidopsis thalian	0.463	0.311	0.586	3.4e-22
TAIR|locus:2012903	287	AT1G20270 [Arabidopsis thalian	0.463	0.313	0.543	4.9e-21
TAIR|locus:2827906	291	P4H5 "prolyl 4-hydroxylase 5"	0.463	0.309	0.554	2.1e-20
TAIR|locus:2125329	290	AT4G35810 [Arabidopsis thalian	0.463	0.310	0.543	2.1e-20
TAIR|locus:2125344	272	AT4G35820 [Arabidopsis thalian	0.469	0.334	0.435	1.8e-14
TAIR|locus:2081106	299	P4H2 "prolyl 4-hydroxylase 2"	0.474	0.307	0.425	2.3e-13
TAIR|locus:2088892	288	AT3G28490 [Arabidopsis thalian	0.453	0.305	0.406	2.4e-13
TAIR|locus:2144960	298	AT5G18900 [Arabidopsis thalian	0.474	0.308	0.425	6.5e-13
TAIR|locus:2118889	288	AT4G33910 [Arabidopsis thalian	0.5	0.336	0.3	1.9e-07

TAIR|locus:2041001 AT-P4H-1 "P4H isoform 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 128/172 (74%), Positives = 147/172 (85%)

Query:     3 MAPSMKIVFGLLTFVTFGMIIGALFQLAFIRKLEDSYGTDFPSF--MRRQKNGYLQLPRG 60
             MAP+MKIVFGLLTFVT GM+IG+L QLAFI +LEDSYGT FPS   +R Q   YL   R 
Sbjct:     1 MAPAMKIVFGLLTFVTVGMVIGSLLQLAFINRLEDSYGTGFPSLRGLRGQNTRYL---RD 57

Query:    61 VTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDT 120
             V+ W NDK+AELLR+G VKPEV+SWSPRI+VLH+FLS EEC+YL+AIARP LQVSTVVD 
Sbjct:    58 VSRWANDKDAELLRIGNVKPEVVSWSPRIIVLHDFLSPEECEYLKAIARPRLQVSTVVDV 117

Query:   121 KTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
             KTGKG+KS+VRTSSGMFL+  E+ YP+IQAIEKRI+VFSQVP ENGELIQVL
Sbjct:   118 KTGKGVKSDVRTSSGMFLTHVERSYPIIQAIEKRIAVFSQVPAENGELIQVL 169

GO:0005506 "iron ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS;IDA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2156852 AT5G66060 [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 54/92 (58%), Positives = 66/92 (71%)

Query:    81 EVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSP 140
             E+ISW PR  V HNFL+ EEC YL  +A+PH++ STVVD KTGK   S VRTSSG FL+ 
Sbjct:    79 EIISWEPRASVYHNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLAR 138

Query:   141 EEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
                K   I+ IEKRIS F+ +PVE+GE +QVL
Sbjct:   139 GRDK--TIREIEKRISDFTFIPVEHGEGLQVL 168

GO:0005506 "iron ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2012903 AT1G20270 [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 50/92 (54%), Positives = 67/92 (72%)

Query:    81 EVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSP 140
             EV+SW PR  V HNFLS EEC+YL ++A+PH+  STVVD++TGK   S VRTSSG FL  
Sbjct:    77 EVLSWEPRAFVYHNFLSKEECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRR 136

Query:   141 EEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
                K  +I+ IEKRI+ ++ +P ++GE +QVL
Sbjct:   137 GRDK--IIKTIEKRIADYTFIPADHGEGLQVL 166

GO:0005506 "iron ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2827906 P4H5 "prolyl 4-hydroxylase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 51/92 (55%), Positives = 66/92 (71%)

Query:    81 EVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSP 140
             EVISW PR +V HNFL+ EEC++L ++A+P +  STVVD KTG    S VRTSSG FL  
Sbjct:    81 EVISWEPRAVVYHNFLTNEECEHLISLAKPSMVKSTVVDEKTGGSKDSRVRTSSGTFLRR 140

Query:   141 EEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
                +  +++ IEKRIS F+ +PVENGE +QVL
Sbjct:   141 GHDE--VVEVIEKRISDFTFIPVENGEGLQVL 170

GO:0005506 "iron ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0080147 "root hair cell development" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0043090 "amino acid import" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2125329 AT4G35810 [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 50/92 (54%), Positives = 65/92 (70%)

Query:    81 EVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSP 140
             EVISW PR  V HNFL+ EEC++L ++A+P +  S VVD KTGK I S VRTSSG FL+ 
Sbjct:    81 EVISWEPRAFVYHNFLTNEECEHLISLAKPSMMKSKVVDVKTGKSIDSRVRTSSGTFLNR 140

Query:   141 EEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
                +  +++ IE RIS F+ +P ENGE +QVL
Sbjct:   141 GHDE--IVEEIENRISDFTFIPPENGEGLQVL 170

GO:0005506 "iron ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2125344 AT4G35820 [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 44/101 (43%), Positives = 64/101 (63%)

Query:    81 EVISWSPRILVLHNFLSM--------EECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRT 132
             EVI+  PR  V HNFL++        EECD+L ++A+P +  S V +  TG G +S+ RT
Sbjct:    89 EVITKEPRAFVYHNFLALFFKICKTNEECDHLISLAKPSMARSKVRNALTGLGEESSSRT 148

Query:   133 SSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLS 173
             SSG F+     K  +++ IEKRIS F+ +P ENGE +QV++
Sbjct:   149 SSGTFIRSGHDK--IVKEIEKRISEFTFIPQENGETLQVIN 187

GO:0005506 "iron ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2081106 P4H2 "prolyl 4-hydroxylase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 40/94 (42%), Positives = 60/94 (63%)

Query:    79 KPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFL 138
             K + +S  PR  V   FL+  ECD+L ++A+ +LQ S V D   G+   S+VRTSSG F+
Sbjct:    37 KVKQVSSKPRAFVYEGFLTDLECDHLISLAKENLQRSAVADNDNGESQVSDVRTSSGTFI 96

Query:   139 SPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
             S  + K P++  IE ++S ++ +P ENGE +QVL
Sbjct:    97 S--KGKDPIVSGIEDKLSTWTFLPKENGEDLQVL 128

GO:0005506 "iron ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS;IDA

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0004656 "procollagen-proline 4-dioxygenase activity" evidence=IDA

GO:0080147 "root hair cell development" evidence=IMP

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2088892 AT3G28490 [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 2.4e-13, P = 2.4e-13
 Identities = 37/91 (40%), Positives = 61/91 (67%)

Query:    83 ISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVV-DTKTGKGIKSNVRTSSGMFLSPE 141
             +SW+PR  +   FLS EECD+L  +A+  L+ S VV D  +G+   S VRTSSGMFL+  
Sbjct:    35 LSWTPRAFLYKGFLSDEECDHLIKLAKGKLEKSMVVADVDSGESEDSEVRTSSGMFLT-- 92

Query:   142 EKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
             +++  ++  +E +++ ++ +P ENGE +Q+L
Sbjct:    93 KRQDDIVANVEAKLAAWTFLPEENGEALQIL 123

GO:0005506 "iron ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2144960 AT5G18900 [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 6.5e-13, P = 6.5e-13
 Identities = 40/94 (42%), Positives = 59/94 (62%)

Query:    79 KPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFL 138
             K + +S  PR  V   FL+  ECD++ ++A+  L+ S V D  +G+   S VRTSSG F+
Sbjct:    36 KVKQVSSKPRAFVYEGFLTELECDHMVSLAKASLKRSAVADNDSGESKFSEVRTSSGTFI 95

Query:   139 SPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
             S  + K P++  IE +IS ++ +P ENGE IQVL
Sbjct:    96 S--KGKDPIVSGIEDKISTWTFLPKENGEDIQVL 127

GO:0005506 "iron ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2118889 AT4G33910 [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 30/100 (30%), Positives = 54/100 (54%)

Query:    75 LGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTK--TGKGIKSNVRT 132
             +G +  +V+SW PR +   NF + E+C  +   A+ +L+ S +   K  T +  K   RT
Sbjct:    73 IGSIPFQVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALALRKGETAENTKGT-RT 131

Query:   133 SSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVL 172
             SSG F+S  E+    +  +E++I+  + +P  +GE   +L
Sbjct:   132 SSGTFISASEESTGALDFVERKIARATMIPRSHGESFNIL 171

GO:0005506 "iron ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0018401 "peptidyl-proline hydroxylation to 4-hydroxy-L-proline" evidence=ISS

GO:0031418 "L-ascorbic acid binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0031348 "negative regulation of defense response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	194
PLN00052	310	PLN00052, PLN00052, prolyl 4-hydroxylase; Provisio	5e-23
smart00702	165	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subun	2e-09

>gnl|CDD|177683 PLN00052, PLN00052, prolyl 4-hydroxylase; Provisional

 Score = 93.2 bits (231), Expect = 5e-23
 Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 83  ISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEE 142
           +SW PRI V   FLS  ECD+L  +A+  +Q S V D K+GK + S VRTSSGMFL  ++
Sbjct: 50  VSWQPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVMSEVRTSSGMFL--DK 107

Query: 143 KKYPMIQAIEKRISVFSQVPVENGELIQVL 172
           ++ P++  IE+RI+ ++ +P EN E IQ+L
Sbjct: 108 RQDPVVSRIEERIAAWTFLPEENAENIQIL 137

Length = 310

>gnl|CDD|214780 smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues

 Score = 53.5 bits (129), Expect = 2e-09
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 4/82 (4%)

Query: 97  SMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRIS 156
           S  EC  L   A P      V          S  R S+G +L   E +  +I+ I +R++
Sbjct: 1   SPAECQKLLEEAEPLGWRGEVTRGIGNPNETSQYRQSNGTWLELLE-RDLVIERIRQRLA 59

Query: 157 VFSQVP---VENGELIQVLSTG 175
            F  +      + E  QV   G
Sbjct: 60  DFLGLLAGLPLSAEDAQVARYG 81

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor. Length = 165

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	194
KOG1591	289	consensus Prolyl 4-hydroxylase alpha subunit [Amin	100.0
PLN00052	310	prolyl 4-hydroxylase; Provisional	99.97
smart00702	178	P4Hc Prolyl 4-hydroxylase alpha subunit homologues	99.76
PRK05467	226	Fe(II)-dependent oxygenase superfamily protein; Pr	97.75
PF13532	194	2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily;	87.42
PHA02813	354	hypothetical protein; Provisional	83.32
PHA02869	418	C4L/C10L-like gene family protein; Provisional	83.03

>KOG1591 consensus Prolyl 4-hydroxylase alpha subunit [Amino acid transport and metabolism]

Probab=100.00  E-value=2.6e-36  Score=264.07  Aligned_cols=141  Identities=42%  Similarity=0.617  Sum_probs=124.9

Q ss_pred             ccccccccCCCc------------eEEEeCCCCcceEEeecceeEEeecCccEEEEcCCCCHHHHHHHHHHhcCCccccE
Q 029399           49 RQKNGYLQLPRG------------VTFWDNDKEAELLRLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVST  116 (194)
Q Consensus        49 ~~~~~y~~lcrg------------l~C~y~~~~~pfl~LaP~K~E~LS~~P~I~~~hdfLSd~Ecd~Li~lA~p~L~rS~  116 (194)
                      .++..|+..|||            +.|++.+.  ||++++|+|+|++||+|+|++||||||++|||+|+.+|+|+|++++
T Consensus        49 ~~~~~~~~~c~g~~~~~~~~~~~~~~~~~~~~--~~~~~ap~k~E~lsw~P~~~~yhd~ls~~e~d~l~~lak~~l~~st  126 (289)
T KOG1591|consen   49 QEFTVYEQGCRGELPPLTKLTLRRLSCRNRAG--PFLRLAPVKLEELSWDPRVVLYHDFLSDEECDHLISLAKPKLERST  126 (289)
T ss_pred             ccccchhhhccCccCccchhHhhhhhcccccC--cceeecchhhhhcccCCceEeehhcCCHHHHHHHHHhhhhhhhcee
Confidence            456678888887            45665544  9999999999999999999999999999999999999999999999


Q ss_pred             E-eeCCCCCeeecceeeeeeeecCCCCCcchHHHHHHHHHHHhcCCCCCCCccceEEEeCCCcccccc------------
Q 029399          117 V-VDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQVLSTGMKKISITS------------  183 (194)
Q Consensus       117 V-~~~~tG~~~~s~~RtS~~awL~~~~~~~pvv~rI~~Ria~ltGl~~~~~E~LQV~nYg~Gg~~~~~------------  183 (194)
                      | .+.++|....+.+|+|+++|+..++  ++++++|++||+++||+|.+++|+|||+|||+||+|..|            
T Consensus       127 v~~~~~~~~~~~~~~R~S~~t~l~~~~--~~~~~~i~~ri~~~T~l~~e~~E~lqVlnYg~Gg~Y~~H~D~~~~~~~~~~  204 (289)
T KOG1591|consen  127 VVADKGTGHSTTSAVRTSSGTFLPDGA--SPVVSRIEQRIADLTGLPVENGESLQVLNYGLGGHYEPHYDYFLPEEDETF  204 (289)
T ss_pred             eeccCCcccccceeeEecceeEecCCC--CHHHHHHHHHHHhccCCCcccCccceEEEecCCccccccccccccccchhh
Confidence            9 4556677778889999999999954  899999999999999999999999999999999998555            


Q ss_pred             -------ceeEEEEecc
Q 029399          184 -------PITITFQTLS  193 (194)
Q Consensus       184 -------~~~~~f~~~~  193 (194)
                             ||+|+-.|||
T Consensus       205 ~~~~~g~RiaT~l~yls  221 (289)
T KOG1591|consen  205 NGLNGGNRIATVLMYLS  221 (289)
T ss_pred             hhcccCCcceeEEEEec
Confidence                   6777777776

>PLN00052 prolyl 4-hydroxylase; Provisional

Probab=99.97  E-value=1.3e-30  Score=230.22  Aligned_cols=118  Identities=38%  Similarity=0.578  Sum_probs=111.3

Q ss_pred             EeecceeEEeecCccEEEEcCCCCHHHHHHHHHHhcCCccccEEeeCCCCCeeecceeeeeeeecCCCCCcchHHHHHHH
Q 029399           74 RLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEK  153 (194)
Q Consensus        74 ~LaP~K~E~LS~~P~I~~~hdfLSd~Ecd~Li~lA~p~L~rS~V~~~~tG~~~~s~~RtS~~awL~~~~~~~pvv~rI~~  153 (194)
                      .+.|.|+|+|||+|+|++||||||++||++||++|++++++|+|++..+|+...+++|||+++||...+  +|++++|++
T Consensus        41 ~~~~~kve~lS~~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~~~~g~~~~s~~RTS~~~~l~~~~--dpvv~~I~~  118 (310)
T PLN00052         41 PFNASRVKAVSWQPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVMSEVRTSSGMFLDKRQ--DPVVSRIEE  118 (310)
T ss_pred             CcCCceEEEecCCCCEEEECCcCCHHHHHHHHHhcccccccceeecCCCCccccCCCEEecceeecCCC--CHHHHHHHH
Confidence            358999999999999999999999999999999999999999999888888888999999999998765  899999999


Q ss_pred             HHHHhcCCCCCCCccceEEEeCCCcccc---------------ccceeEEEEecc
Q 029399          154 RISVFSQVPVENGELIQVLSTGMKKISI---------------TSPITITFQTLS  193 (194)
Q Consensus       154 Ria~ltGl~~~~~E~LQV~nYg~Gg~~~---------------~~~~~~~f~~~~  193 (194)
                      ||++++|+|.++.|.+||+||++||+|.               .+|++|+++||+
T Consensus       119 Ria~~t~lp~~~~E~lQVlrY~~Gq~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLn  173 (310)
T PLN00052        119 RIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKINQALGGHRYATVLMYLS  173 (310)
T ss_pred             HHHHHhCCCcccCcceEEEecCCCCCCCCCCCccccccccccCCceeEEEEEEec
Confidence            9999999999999999999999999984               468999999997

>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues

Probab=99.76  E-value=6.8e-18  Score=136.38  Aligned_cols=106  Identities=26%  Similarity=0.265  Sum_probs=93.7

Q ss_pred             ccEEEEcCCCCHHHHHHHHHHhcCCccccEEeeCCCCCeeecceeeeeeeecCCCCCcchHHHHHHHHHHHhcCCC---C
Q 029399           87 PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVP---V  163 (194)
Q Consensus        87 P~I~~~hdfLSd~Ecd~Li~lA~p~L~rS~V~~~~tG~~~~s~~RtS~~awL~~~~~~~pvv~rI~~Ria~ltGl~---~  163 (194)
                      |.|+++|||||++||+.|++++++...++.+.+..++....+++|+|+.+|+...+ .++++++|.+|++++++++   .
T Consensus         1 P~i~~~~~~ls~~ec~~li~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~-~~~~~~~l~~~i~~~~~~~~~~~   79 (178)
T smart00702        1 PGVVVFHDFLSPAECQKLLEEAEPLGWRGEVTRGDTNPNHDSKYRQSNGTWLELLK-GDLVIERIRQRLADFLGLLRGLP   79 (178)
T ss_pred             CcEEEECCCCCHHHHHHHHHHhhhhcccceeecCCCCccccCCCEeecceecCCCC-CCHHHHHHHHHHHHHHCCCchhh
Confidence            89999999999999999999999999999998765443356889999999998763 3699999999999999998   7


Q ss_pred             CCCccceEEEeCCCccccc-----------cceeEEEEecc
Q 029399          164 ENGELIQVLSTGMKKISIT-----------SPITITFQTLS  193 (194)
Q Consensus       164 ~~~E~LQV~nYg~Gg~~~~-----------~~~~~~f~~~~  193 (194)
                      .+.|.+|+++|++|++|..           +|+.|+.+||+
T Consensus        80 ~~~~~~~~~~Y~~g~~~~~H~D~~~~~~~~~r~~T~~~yLn  120 (178)
T smart00702       80 LSAEDAQVARYGPGGHYGPHVDNFEDDENGDRIATFLLYLN  120 (178)
T ss_pred             ccCcceEEEEECCCCcccCcCCCCCCCCCCCeEEEEEEEec
Confidence            8999999999999999744           56899999987

Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.

>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional

Probab=97.75  E-value=0.00011  Score=62.94  Aligned_cols=85  Identities=15%  Similarity=0.109  Sum_probs=55.2

Q ss_pred             EEEEcCCCCHHHHHHHHHHhcC-CccccEEeeCCCCCeeecceeeeeeeecCCCCCcchHHHHHHHHHHHhc--------
Q 029399           89 ILVLHNFLSMEECDYLRAIARP-HLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFS--------  159 (194)
Q Consensus        89 I~~~hdfLSd~Ecd~Li~lA~p-~L~rS~V~~~~tG~~~~s~~RtS~~awL~~~~~~~pvv~rI~~Ria~lt--------  159 (194)
                      |+.++||||++||+++++..+. .+....+..   | ...+++|....  +..+   ++..+.|.+||....        
T Consensus         2 i~~I~~vLs~eec~~~~~~le~~~~~dg~~ta---G-~~~~~vKnN~q--l~~d---~~~a~~l~~~i~~~L~~~~l~~s   72 (226)
T PRK05467          2 LLHIPDVLSPEEVAQIRELLDAAEWVDGRVTA---G-AQAAQVKNNQQ--LPED---SPLARELGNLILDALTRNPLFFS   72 (226)
T ss_pred             eeeecccCCHHHHHHHHHHHHhcCCccCCcCc---C-ccchhcccccc--cCCC---CHHHHHHHHHHHHHHhcCchhhh
Confidence            6789999999999999998753 333222211   1 12345565433  3333   577777888877544        


Q ss_pred             -CCCCCCCccceEEEeCCCcccccc
Q 029399          160 -QVPVENGELIQVLSTGMKKISITS  183 (194)
Q Consensus       160 -Gl~~~~~E~LQV~nYg~Gg~~~~~  183 (194)
                       .+| ...+++.+.+|..|++|..|
T Consensus        73 a~lp-~~i~~~~f~rY~~G~~y~~H   96 (226)
T PRK05467         73 AALP-RKIHPPLFNRYEGGMSYGFH   96 (226)
T ss_pred             hccc-cccccceEEEECCCCccCcc
Confidence             233 23357789999999998555

>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A

Probab=87.42  E-value=3.7  Score=32.89  Aligned_cols=21  Identities=38%  Similarity=0.404  Sum_probs=17.6

Q ss_pred             EEEEcCCCCHHHHHHHHHHhc
Q 029399           89 ILVLHNFLSMEECDYLRAIAR  109 (194)
Q Consensus        89 I~~~hdfLSd~Ecd~Li~lA~  109 (194)
                      +.+++||||++|.+.|.+...
T Consensus         2 ~~~~~~fls~~e~~~l~~~l~   22 (194)
T PF13532_consen    2 LYYIPNFLSEEEAAELLNELR   22 (194)
T ss_dssp             EEEETTSS-HHHHHHHHHHHH
T ss_pred             EEEECCCCCHHHHHHHHHHHH
Confidence            578999999999999998775

...

>PHA02813 hypothetical protein; Provisional

Probab=83.32  E-value=3.1  Score=37.99  Aligned_cols=73  Identities=15%  Similarity=0.145  Sum_probs=51.2

Q ss_pred             cCCccccEEeeCCCC-CeeecceeeeeeeecCCCCCcchHHHHHHHHHH-HhcCCC----CCCCccceEEEeCCCccccc
Q 029399          109 RPHLQVSTVVDTKTG-KGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRIS-VFSQVP----VENGELIQVLSTGMKKISIT  182 (194)
Q Consensus       109 ~p~L~rS~V~~~~tG-~~~~s~~RtS~~awL~~~~~~~pvv~rI~~Ria-~ltGl~----~~~~E~LQV~nYg~Gg~~~~  182 (194)
                      .-.+..|.+.+..+| +....+.|+++.+-++..   +.+..+|.+-+- .+.|.+    +.-.|.+-+.+|.+|++|..
T Consensus        33 d~~~~~s~i~~~~~~ge~l~~~iRnNkrviid~~---~~L~erIr~~Lp~~l~~~~lv~~V~vnerirfyrY~kGq~F~~  109 (354)
T PHA02813         33 DIIWEESKVFDHEKGGEVINTNERQCKQYIIRGL---DDIFKVIRKKLLLSFEFPQKISDIILDNTITLIKYEKGDFFNN  109 (354)
T ss_pred             ccCccccceeccccCceEEccccccceEEEEcCH---HHHHHHHHHhhHHHhcCCccceeEEEcceEEEEEECCCcccCc
Confidence            345788999986665 445678999999888743   355555555554 344444    24578999999999999876


Q ss_pred             cc
Q 029399          183 SP  184 (194)
Q Consensus       183 ~~  184 (194)
                      |+
T Consensus       110 H~  111 (354)
T PHA02813        110 HR  111 (354)
T ss_pred             cc
Confidence            64

>PHA02869 C4L/C10L-like gene family protein; Provisional

Probab=83.03  E-value=2.2  Score=39.66  Aligned_cols=69  Identities=10%  Similarity=0.072  Sum_probs=49.7

Q ss_pred             CccccEEeeCCCCC-eeecceeeeeeeecCCCCCcchHHHHHHHHHHH-----hcCC--CCCCCccceEEEeCCCccccc
Q 029399          111 HLQVSTVVDTKTGK-GIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISV-----FSQV--PVENGELIQVLSTGMKKISIT  182 (194)
Q Consensus       111 ~L~rS~V~~~~tG~-~~~s~~RtS~~awL~~~~~~~pvv~rI~~Ria~-----ltGl--~~~~~E~LQV~nYg~Gg~~~~  182 (194)
                      ....|.+.+..+|. ......|+|++.-+.+.     ..+.|.+|++.     +-|.  .+.-.|.+-+.+|.+|++|..
T Consensus        44 ~~~~s~i~~~~~g~e~~~~~~~ksKqii~e~~-----La~~L~erlr~lLp~~lk~~v~~V~lnerirfyrY~kGq~F~~  118 (418)
T PHA02869         44 ICEDSKIFFPEKRTELLSIKDRKSKQIVFENS-----LNDDLLKKLHALIYDELSTVVDSVTVENTVTLIMYEKGDYFAR  118 (418)
T ss_pred             ccccceeeccccCceeEeeccccceeEEechH-----HHHHHHHHHHHhhhHHhhCccceEEEcceEEEEEECCCCcccc
Confidence            46789999987874 34567899999888753     44445555543     3343  345678999999999999987


Q ss_pred             cc
Q 029399          183 SP  184 (194)
Q Consensus       183 ~~  184 (194)
                      |+
T Consensus       119 H~  120 (418)
T PHA02869        119 HR  120 (418)
T ss_pred             cc
Confidence            75

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	194
3gze_A	225	Algal Prolyl 4-Hydroxylase Complexed With Zinc And		4e-18
2jij_A	233	Crystal Structure Of The Apo Form Of Chlamydomonas		5e-18
2jig_A	224	Crystal Structure Of Chlamydomonas Reinhardtii Prol		5e-18
2v4a_A	233	Crystal Structure Of The Semet-Labeled Prolyl-4 Hyd		8e-18
3itq_A	216	Crystal Structure Of A Prolyl 4-Hydroxylase From Ba		2e-08

>pdb|3GZE|A Chain A, Algal Prolyl 4-Hydroxylase Complexed With Zinc And (Ser-Pro)5 Peptide Substrate Length = 225

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 83  ISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEE 142
           +SWSPR  +L NFLS EECDY+   ARP +  S+VVD ++GK + S +RTS+G + +  E
Sbjct: 17  LSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGE 76
Query: 143 KKYPMIQAIEKRISVFSQVPVENGELIQVL 172
               +I  IEKR++  + +P+EN E +QVL
Sbjct: 77  DS--VISKIEKRVAQVTMIPLENHEGLQVL 104

>pdb|2JIJ|A Chain A, Crystal Structure Of The Apo Form Of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I Length = 233

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 83  ISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEE 142
           +SWSPR  +L NFLS EECDY+   ARP +  S+VVD ++GK + S +RTS+G + +  E
Sbjct: 25  LSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGE 84
Query: 143 KKYPMIQAIEKRISVFSQVPVENGELIQVL 172
               +I  IEKR++  + +P+EN E +QVL
Sbjct: 85  DS--VISKIEKRVAQVTMIPLENHEGLQVL 112

>pdb|2JIG|A Chain A, Crystal Structure Of Chlamydomonas Reinhardtii Prolyl-4 Hydroxylase Type I Complexed With Zinc And Pyridine-2,4- Dicarboxylate Length = 224

Iteration: 1
 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 83  ISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEE 142
           +SWSPR  +L NFLS EECDY+   ARP +  S+VVD ++GK + S +RTS+G + +  E
Sbjct: 16  LSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGE 75
Query: 143 KKYPMIQAIEKRISVFSQVPVENGELIQVL 172
               +I  IEKR++  + +P+EN E +QVL
Sbjct: 76  DS--VISKIEKRVAQVTMIPLENHEGLQVL 103

>pdb|2V4A|A Chain A, Crystal Structure Of The Semet-Labeled Prolyl-4 Hydroxylase (P4h) Type I From Green Algae Chlamydomonas Reinhardtii. Length = 233

Iteration: 1
 Score = 86.7 bits (213), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 83  ISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEE 142
           +SWSPR  +L NFLS EECDY+   ARP    S+VVD ++GK + S +RTS+G + +  E
Sbjct: 25  LSWSPRAFLLKNFLSDEECDYIVEKARPKXVKSSVVDNESGKSVDSEIRTSTGTWFAKGE 84
Query: 143 KKYPMIQAIEKRISVFSQVPVENGELIQVL 172
               +I  IEKR++  + +P+EN E +QVL
Sbjct: 85  DS--VISKIEKRVAQVTXIPLENHEGLQVL 112

>pdb|3ITQ|A Chain A, Crystal Structure Of A Prolyl 4-Hydroxylase From Bacillus Anthracis Length = 216

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 87  PRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP 146
           P I+VL N LS EECD L  +++  L  S V  ++      +++RTSSG FL   E    
Sbjct: 39  PLIVVLGNVLSDEECDELIELSKSKLARSKVGSSRD----VNDIRTSSGAFLDDNE---- 90
Query: 147 MIQAIEKRISVFSQVPVENGELIQVLS 173
           +   IEKRIS    VP  +GE + +L+
Sbjct: 91  LTAKIEKRISSIXNVPASHGEGLHILN 117

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	194
2jig_A	224	Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {	3e-33
3itq_A	216	Prolyl 4-hydroxylase, alpha subunit domain protei;	1e-31

>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Length = 224

 Score =  117 bits (294), Expect = 3e-33
 Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 2/94 (2%)

Query: 78  VKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMF 137
            +   +SWSPR  +L NFLS EECDY+   ARP +  S+VVD ++GK + S +RTS+G +
Sbjct: 11  GEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTW 70

Query: 138 LSPEEKKYPMIQAIEKRISVFSQVPVENGELIQV 171
            +  E    +I  IEKR++  + +P+EN E +QV
Sbjct: 71  FAKGE--DSVISKIEKRVAQVTMIPLENHEGLQV 102

>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Length = 216

 Score =  113 bits (284), Expect = 1e-31
 Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 10/121 (8%)

Query: 54  YLQLPRGVTFWDNDKEAELLRLGYVKPEVI--SWSPRILVLHNFLSMEECDYLRAIARPH 111
             Q+         D +  +++    + ++I     P I+VL N LS EECD L  +++  
Sbjct: 4   NNQIGENKEQTIFDHKGNVIKTEDREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSK 63

Query: 112 LQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFSQVPVENGELIQV 171
           L  S V  ++      +++RTSSG FL        +   IEKRIS    VP  +GE + +
Sbjct: 64  LARSKVGSSRD----VNDIRTSSGAFLDDN----ELTAKIEKRISSIMNVPASHGEGLHI 115

Query: 172 L 172
           L
Sbjct: 116 L 116

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	194
2jig_A	224	Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {	99.95
3itq_A	216	Prolyl 4-hydroxylase, alpha subunit domain protei;	99.93
3dkq_A	243	PKHD-type hydroxylase SBAL_3634; putative oxygenas	99.25
2hbt_A	247	EGL nine homolog 1; prolyl hydroxylase, hypoxia in	98.62
2iuw_A	238	Alkylated repair protein ALKB homolog 3; oxidoredu	92.11
3s57_A	204	Alpha-ketoglutarate-dependent dioxygenase ALKB HO;	81.24

>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A

Probab=99.95  E-value=2.2e-27  Score=197.72  Aligned_cols=118  Identities=36%  Similarity=0.545  Sum_probs=110.4

Q ss_pred             EeecceeEEeecCccEEEEcCCCCHHHHHHHHHHhcCCccccEEeeCCCCCeeecceeeeeeeecCCCCCcchHHHHHHH
Q 029399           74 RLGYVKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEK  153 (194)
Q Consensus        74 ~LaP~K~E~LS~~P~I~~~hdfLSd~Ecd~Li~lA~p~L~rS~V~~~~tG~~~~s~~RtS~~awL~~~~~~~pvv~rI~~  153 (194)
                      .++|.|+|+||++|+|+++|||||++||++|++++++++++|++.+..+|+...+.+|+|+++||+..+  ++++++|.+
T Consensus         7 ~~~~~k~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~--~~~~~~i~~   84 (224)
T 2jig_A            7 EEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGE--DSVISKIEK   84 (224)
T ss_dssp             CCCCCCEEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTTC--SHHHHHHHH
T ss_pred             cccCcceEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCCC--CHHHHHHHH
Confidence            578999999999999999999999999999999999999999999987788888899999999999865  799999999


Q ss_pred             HHHHhcCCCCCCCccceEEEeCCCcccc-----------------ccceeEEEEecc
Q 029399          154 RISVFSQVPVENGELIQVLSTGMKKISI-----------------TSPITITFQTLS  193 (194)
Q Consensus       154 Ria~ltGl~~~~~E~LQV~nYg~Gg~~~-----------------~~~~~~~f~~~~  193 (194)
                      ||++++|+|....|.+||+||++||+|.                 .+|+.|+.+||+
T Consensus        85 ri~~~~gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLn  141 (224)
T 2jig_A           85 RVAQVTMIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLT  141 (224)
T ss_dssp             HHHHHHTCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECS
T ss_pred             HHHHHhCCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEec
Confidence            9999999999999999999999999973                 468899999997

>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}

Probab=99.93  E-value=3.3e-26  Score=191.73  Aligned_cols=108  Identities=32%  Similarity=0.402  Sum_probs=93.7

Q ss_pred             ceeEEeecCccEEEEcCCCCHHHHHHHHHHhcCCccccEEeeCCCCCeeecceeeeeeeecCCCCCcchHHHHHHHHHHH
Q 029399           78 VKPEVISWSPRILVLHNFLSMEECDYLRAIARPHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISV  157 (194)
Q Consensus        78 ~K~E~LS~~P~I~~~hdfLSd~Ecd~Li~lA~p~L~rS~V~~~~tG~~~~s~~RtS~~awL~~~~~~~pvv~rI~~Ria~  157 (194)
                      ++++++|++|+|++||||||++||++|+++|++++++|+|...    ...+++|+|+++||++    ++++++|++||++
T Consensus        30 v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~----~~~~~~RtS~~~wl~~----~~~v~~i~~Ri~~  101 (216)
T 3itq_A           30 IQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS----RDVNDIRTSSGAFLDD----NELTAKIEKRISS  101 (216)
T ss_dssp             EEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHHHC------------CCCCGGGTTCEECCC----CHHHHHHHHHHHH
T ss_pred             EEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcccccceeccC----CccCCcEeeeeEEeCC----cHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999999998321    3467899999999987    4999999999999


Q ss_pred             hcCCCCCCCccceEEEeCCCccccc--------------cceeEEEEecc
Q 029399          158 FSQVPVENGELIQVLSTGMKKISIT--------------SPITITFQTLS  193 (194)
Q Consensus       158 ltGl~~~~~E~LQV~nYg~Gg~~~~--------------~~~~~~f~~~~  193 (194)
                      ++|+|.+++|.+||+||++||+|..              +|+.|+.+||+
T Consensus       102 ~~gl~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLn  151 (216)
T 3itq_A          102 IMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLN  151 (216)
T ss_dssp             HHTSCGGGBCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECS
T ss_pred             hcCceeccccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecc
Confidence            9999999999999999999999743              58899999997

>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}

Probab=99.25  E-value=9.8e-12  Score=105.60  Aligned_cols=104  Identities=12%  Similarity=-0.051  Sum_probs=78.6

Q ss_pred             EEeecCccEEEEcCCCCHHHHHHHHHHhcC-CccccEEeeCCCCCeeecceeeeeeeecCCCCCcchHHHHHHHHHHHhc
Q 029399           81 EVISWSPRILVLHNFLSMEECDYLRAIARP-HLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYPMIQAIEKRISVFS  159 (194)
Q Consensus        81 E~LS~~P~I~~~hdfLSd~Ecd~Li~lA~p-~L~rS~V~~~~tG~~~~s~~RtS~~awL~~~~~~~pvv~rI~~Ria~lt  159 (194)
                      |-+-.++.++++|||||++||++|+++++. .+.++.+.    +...  ..+..++.|+..+   +|++++|.+||.+.+
T Consensus        13 ~~~~~~~~i~~i~dvLs~~Ec~~li~~~e~~~~~dg~~t----~g~~--~~~vr~n~~l~~d---~~~~~~l~~~i~~~l   83 (243)
T 3dkq_A           13 ENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQT----SGAM--ATTRKRNQQLDKD---DPVAVALGQQIMDRL   83 (243)
T ss_dssp             -CCCCBTTBEEECCSSCHHHHHHHHHHHHTSCCEEECCC----SSBS--SCCCEEEEECCTT---CHHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEECCCCCHHHHHHHHHHHhhCCCccCccc----CCCc--cccceeeeEECCC---CHHHHHHHHHHHHHH
Confidence            445578999999999999999999999963 33332222    1112  2344556788854   699999999999999


Q ss_pred             CCC--------CCCCccceEEEeCCCcccccc--------------ceeEEEEecc
Q 029399          160 QVP--------VENGELIQVLSTGMKKISITS--------------PITITFQTLS  193 (194)
Q Consensus       160 Gl~--------~~~~E~LQV~nYg~Gg~~~~~--------------~~~~~f~~~~  193 (194)
                      +..        ....|++|+++|++|++|..|              +..|+-+||+
T Consensus        84 ~~~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLn  139 (243)
T 3dkq_A           84 LAHPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLS  139 (243)
T ss_dssp             HTCHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECS
T ss_pred             ccCcchhhcccccccccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeC
Confidence            877        246889999999999998555              5778888886

>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*

Probab=98.62  E-value=1.7e-07  Score=79.30  Aligned_cols=105  Identities=11%  Similarity=0.087  Sum_probs=72.3

Q ss_pred             ccEEEEcCCCCHHHHHHHHHHhcC-----CccccEEeeCCCCCeeecceeeeeeeecCCCCCcch----HHHHHHHHHHH
Q 029399           87 PRILVLHNFLSMEECDYLRAIARP-----HLQVSTVVDTKTGKGIKSNVRTSSGMFLSPEEKKYP----MIQAIEKRISV  157 (194)
Q Consensus        87 P~I~~~hdfLSd~Ecd~Li~lA~p-----~L~rS~V~~~~tG~~~~s~~RtS~~awL~~~~~~~p----vv~rI~~Ria~  157 (194)
                      +-+++++|||+++||+.|++.++.     .++++.+.+.  +.......|+++.+|+...+...+    ..++|++.+..
T Consensus        26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~--~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~  103 (247)
T 2hbt_A           26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQ--KSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRH  103 (247)
T ss_dssp             TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEEC--CSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccc--cccccccccccceeeecccccchhHHHHHHHHHHHHHHH
Confidence            346789999999999999998864     5777777652  123557899999999997641122    34455554444


Q ss_pred             hcCC-CCC---CCccceEEEeCC-Ccccccc--------ceeEEEEecc
Q 029399          158 FSQV-PVE---NGELIQVLSTGM-KKISITS--------PITITFQTLS  193 (194)
Q Consensus       158 ltGl-~~~---~~E~LQV~nYg~-Gg~~~~~--------~~~~~f~~~~  193 (194)
                      +.+. ...   ..+.+|+++|.+ |++|-.|        |..|+-+||.
T Consensus       104 ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~~~~R~~T~vlYLN  152 (247)
T 2hbt_A          104 CNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVTCIYYLN  152 (247)
T ss_dssp             TTTTSTTCCEEEECCEEEEEECSSSCCEEEECSSCSCCSEEEEEEEECB
T ss_pred             HhhhcCcccccccceEEEEEecCCCCcccccccCCCCCCceEEEEEEeC
Confidence            3331 212   136699999997 9988544        6788888885

>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10

Probab=92.11  E-value=1.2  Score=36.80  Aligned_cols=84  Identities=12%  Similarity=0.128  Sum_probs=50.4

Q ss_pred             ccEEEEcCCCCHHHHHHHHHHhc--CCccccEEeeCCCCCeeecceeeeeeeecCCC----------C--CcchHHHHHH
Q 029399           87 PRILVLHNFLSMEECDYLRAIAR--PHLQVSTVVDTKTGKGIKSNVRTSSGMFLSPE----------E--KKYPMIQAIE  152 (194)
Q Consensus        87 P~I~~~hdfLSd~Ecd~Li~lA~--p~L~rS~V~~~~tG~~~~s~~RtS~~awL~~~----------~--~~~pvv~rI~  152 (194)
                      |-+.+++|||+++|.+.|.+.-.  -.++......  -|+......++   +|+.+.          .  .=.+.+..|.
T Consensus        40 ~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~--~g~~~~~~R~~---~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~  114 (238)
T 2iuw_A           40 SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIR--EDITYQQPRLT---AWYGELPYTYSRITMEPNPHWHPVLRTLK  114 (238)
T ss_dssp             EEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEES--SSCEEECSSEE---EEEECCCTTSCHHHHCCBSSCCHHHHHHH
T ss_pred             CcEEEECCCCCHHHHHHHHHHHHHhCCCccCceec--CCcccccCCee---EEcCCCccccCCcccCCCCCCCHHHHHHH
Confidence            45999999999999999987642  2333333221  13333222222   243310          0  0036788889


Q ss_pred             HHHHHhcCCCCCCCccceEEEeCCCc
Q 029399          153 KRISVFSQVPVENGELIQVLSTGMKK  178 (194)
Q Consensus       153 ~Ria~ltGl~~~~~E~LQV~nYg~Gg  178 (194)
                      +++++.+|.+.+   ..-|..|..|+
T Consensus       115 ~~~~~~~g~~~n---~~LvN~Y~~G~  137 (238)
T 2iuw_A          115 NRIEENTGHTFN---SLLCNLYRNEK  137 (238)
T ss_dssp             HHHHHHHSCCCC---EEEEEEECSTT
T ss_pred             HHHHHHhCCCCC---EEEEEEECCCC
Confidence            999988886543   45577799887

>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*

Probab=81.24  E-value=15  Score=29.27  Aligned_cols=88  Identities=10%  Similarity=-0.034  Sum_probs=52.3

Q ss_pred             ecCccEEEEcCCCCHHHHHHHHHHh--cCCc---cccEEeeCCCCCeeecceeeeeeeecCCCC-------------Ccc
Q 029399           84 SWSPRILVLHNFLSMEECDYLRAIA--RPHL---QVSTVVDTKTGKGIKSNVRTSSGMFLSPEE-------------KKY  145 (194)
Q Consensus        84 S~~P~I~~~hdfLSd~Ecd~Li~lA--~p~L---~rS~V~~~~tG~~~~s~~RtS~~awL~~~~-------------~~~  145 (194)
                      --+=..+.|.+||+++|++.|.+.-  +..+   +...+.-  -|+.... -|.  .+|..+..             .=.
T Consensus         7 ~~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~--~gk~~~~-pR~--~~wyg~~~~~Y~Ysg~~~~~~pwp   81 (204)
T 3s57_A            7 RAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQV--FGKWHSV-PRK--QATYGDAGLTYTFSGLTLSPKPWI   81 (204)
T ss_dssp             EETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEE--TTEEEEC-SSE--EEEEECTTCCEEETTEEECCEECC
T ss_pred             eeCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEE--CCeEecc-CcE--EEEECCCCCCcccCCCcccCCCCC
Confidence            3444567899999999999987743  3444   3222221  1332222 121  24443211             004


Q ss_pred             hHHHHHHHHHHHhcCCCCCCCccceEEEeCCCcc
Q 029399          146 PMIQAIEKRISVFSQVPVENGELIQVLSTGMKKI  179 (194)
Q Consensus       146 pvv~rI~~Ria~ltGl~~~~~E~LQV~nYg~Gg~  179 (194)
                      |.+..|.+++++.+|.+.+.   .-|..|..|+-
T Consensus        82 ~~L~~l~~~~~~~~g~~~n~---~LvN~Y~~G~d  112 (204)
T 3s57_A           82 PVLERIRDHVSGVTGQTFNF---VLINRYKDGSD  112 (204)
T ss_dssp             HHHHHHHHHHHHHHCCCCSE---EEEEEESSTTC
T ss_pred             HHHHHHHHHHHHHhCCCCce---eEEEEECCCCC
Confidence            78999999999998876544   34667988873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	194
d2iuwa1	210	AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]	95.76

>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: AlkB-like
domain: AlkB homolog 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.033  Score=42.64  Aligned_cols=101  Identities=14%  Similarity=0.093  Sum_probs=60.4

Q ss_pred             eeEEeecCcc----EEEEcCCCCHHHHHHHHHHhcC--CccccEEeeCCCCCeeec----------ceeeeeeeecCCCC
Q 029399           79 KPEVISWSPR----ILVLHNFLSMEECDYLRAIARP--HLQVSTVVDTKTGKGIKS----------NVRTSSGMFLSPEE  142 (194)
Q Consensus        79 K~E~LS~~P~----I~~~hdfLSd~Ecd~Li~lA~p--~L~rS~V~~~~tG~~~~s----------~~RtS~~awL~~~~  142 (194)
                      +.-++++.|.    +.++.|||+++|.+.|.+....  .+.+.....  -|+....          .++.+...+.....
T Consensus         7 ~~~~~~~~p~g~~~l~y~p~fLs~~e~~~Ll~~L~~e~~w~~~~~~~--~g~~~~~pR~~~~~~d~~y~y~~~~~~~~~~   84 (210)
T d2iuwa1           7 GVYEISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIR--EDITYQQPRLTAWYGELPYTYSRITMEPNPH   84 (210)
T ss_dssp             EEEEEECCSSSCEEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEES--SSCEEECSSEEEEEECCCTTSCHHHHCCBSS
T ss_pred             CceEeccCCCCcceEEEECCcCCHHHHHHHHHHHHhhCCccccceec--cCcccceeeeeEEecCcCccccccccccCCC
Confidence            4557788885    8999999999999999875421  222222211  1121111          11212111111110


Q ss_pred             CcchHHHHHHHHHHHhcCCCCCCCccceEEEeCCCccccccce
Q 029399          143 KKYPMIQAIEKRISVFSQVPVENGELIQVLSTGMKKISITSPI  185 (194)
Q Consensus       143 ~~~pvv~rI~~Ria~ltGl~~~~~E~LQV~nYg~Gg~~~~~~~  185 (194)
                       -.+.+..+.+++...++.+.++   ..+.+|..|+..+..|.
T Consensus        85 -~~~~l~~l~~~~~~~~~~~~~~---~~ln~Y~~~~~~I~~H~  123 (210)
T d2iuwa1          85 -WHPVLRTLKNRIEENTGHTFNS---LLCNLYRNEKDSVDWHS  123 (210)
T ss_dssp             -CCHHHHHHHHHHHHHHSCCCCE---EEEEEECSTTCCEEEEC
T ss_pred             -CcHHHHHHHHhhhhhcCccchh---hhhhccccCCCccccCc
Confidence             1478999999999999887543   46788988888766553