Citrus Sinensis ID: 029466

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
Protein Sequence
MTILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVKSEHEGIKLGRKDVRLPVQQVTLEGERQEVDETEVDETKKAKPEESKDEGGGGGDDEIDGNEQDKSEEEEPEEVEDLIDEEDREREEETAEQESEEAENQLEDESLLLNPVHYGDGSSSEAREELYKGENAAGR
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccHHHHHcccccccccccccccccccccccccccccccccHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mtilkqsssknlrskgfkvKHFLQICLLLAICFWLLHQVRKSYDrkkayeegtatqsevksehegiklgrkdvrlpvqqvtlegerqevdetevdetkkakpeeskdegggggddeidgneqdkseeeepeeveDLIDEEDREREEETAEQESEEAENQledeslllnpvhygdgssseAREELYKGENAAGR
Flexible Loop (DISEMBL)
mtilkqsssknlrskgfkVKHFLQICLLLAICFWLLHQVRKSYDRKKAyeegtatqsevksehegiklgrkdvrlpvqqvtlegerqevdetevdetkkakpeeskdegggggddeidgneqdkseeeepeevedlideedrEREEETaeqeseeaenqledesllLNPVHYGdgssseareelykgenaagr
Low Complexity Region (SEG)
MTILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVKSEHEGIKLGRKDVRLPVQQVTLEGERQEVDETEVDETKKAKPeeskdegggggddeidgneqdkseeeepeevedlideedrereeetaeqeseeaenqledeSLLLNPVHYGDGSSSEAREELYKGENAAGR
Disordered region (IsUnstruct)
***************GFKVKHFLQICLLLAICFWLLHQVRKSY******************************************************************************************************************************************************
Disordered Region (DISOPRED)
********************HFLQICLLLAICFWLLHQVRKSY***********************KLG****************************************************************************************************************************
Disordered Region (DISEMBL)
MTILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYD*********************IKLGRKDVRLPVQQVTLEGE***************************************************************************EDESLLLNPVHYG********************
Disordered Region (DISPRO)
***************GFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEE***********HEGIK***KDV************************************************************************************************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVKSEHEGIKLGRKDVRLPVQQVTLEGERQEVDETEVDETKKAKPEESKDEGGGGGDDEIDGNEQDKSEEEEPEEVEDLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLNPVHYGDGSSSEAREELYKGENAAGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
255537912	368	conserved hypothetical protein [Ricinus	0.963	0.505	0.5	6e-33
224067140	283	predicted protein [Populus trichocarpa]	0.974	0.664	0.507	3e-30
359496668	659	PREDICTED: uncharacterized protein LOC10	0.595	0.174	0.440	5e-21
147800906	274	hypothetical protein VITISV_001849 [Viti	0.699	0.492	0.492	8e-19
225429143	511	PREDICTED: uncharacterized protein LOC10	0.647	0.244	0.398	7e-18
224097204	431	predicted protein [Populus trichocarpa]	0.637	0.285	0.458	7e-18
297745702	475	unnamed protein product [Vitis vinifera]	0.373	0.151	0.5	6e-17
356540315	500	PREDICTED: uncharacterized protein LOC10	0.373	0.144	0.520	1e-15
255562138	584	Pinin, putative [Ricinus communis] gi|22	0.378	0.125	0.506	2e-15
297736385	116	unnamed protein product [Vitis vinifera]	0.352	0.586	0.550	1e-13

>gi|255537912|ref|XP_002510021.1| conserved hypothetical protein [Ricinus communis] gi|223550722|gb|EEF52208.1| conserved hypothetical protein [Ricinus communis]

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/192 (50%), Positives = 133/192 (69%), Gaps = 6/192 (3%)

Query: 3   ILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSE-VKS 61
           +LKQS+S+  RSKGFKVKHFLQICL L IC WLL+ ++ SYD+K AY+  T   SE V+S
Sbjct: 1   MLKQSTSRTHRSKGFKVKHFLQICLFLGICIWLLNHLKHSYDKKNAYDNSTGKISEQVQS 60

Query: 62  EHEGIKLGRKDVRLPVQQVTLEGERQEVDETEVDETKKAKPEESKDEGGGGGDDEIDGNE 121
           ++E +KLGRK +   V +  L  E Q       +E ++ KP++ +D+  GGGDDEIDG++
Sbjct: 61  KYEVVKLGRKHLHPRVDETALGIESQLDKAELEEEVEEIKPQDLEDDERGGGDDEIDGHD 120

Query: 122 QDKSEEEEPEEVEDLIDEEDREREEETAEQESEEAENQLEDESLLLNPVHYGDG--SSSE 179
           Q+++EE+E EEVEDLID +DRER+  + EQESEE  N+LED S   N     +G     +
Sbjct: 121 QERAEEDESEEVEDLIDVDDRERDVGSEEQESEEKGNRLEDAS---NNQSRNNGERFPRQ 177

Query: 180 AREELYKGENAA 191
           AREE +KG++A+
Sbjct: 178 AREEHFKGDDAS 189

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067140|ref|XP_002302375.1| predicted protein [Populus trichocarpa] gi|222844101|gb|EEE81648.1| predicted protein [Populus trichocarpa]

 Score =  137 bits (344), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/191 (50%), Positives = 135/191 (70%), Gaps = 3/191 (1%)

Query: 3   ILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQS-EVKS 61
           +LKQSSS+NLRSKGFKVKHF+Q+ LLLAI  WL++Q++ SY +K AYE+ T   S EV+ 
Sbjct: 1   MLKQSSSRNLRSKGFKVKHFIQVFLLLAIGVWLVNQLKHSYHKKAAYEDSTGKISEEVRG 60

Query: 62  EHEGIKLGRKDVRLPVQQVTLEGERQEVDETEVDETKKAKPEESKDEGGGGGDDEIDGNE 121
           ++E +KLGRK +   V++  LE E  E      +E ++ KP E +DE G GGD+EIDG++
Sbjct: 61  DYEVVKLGRKGLHPRVRETGLEIENHEGKAELEEEIEEIKPGEIEDE-GSGGDEEIDGHD 119

Query: 122 QDKSEEEEPEEVEDLIDEEDREREEETAEQESEEAENQLEDESLLLNPVHY-GDGSSSEA 180
           Q ++EEEE EEVEDLID +D+EREE   +QE EE  +QLED S L +     G+ +  + 
Sbjct: 120 QVRTEEEETEEVEDLIDVDDKEREETNEDQEIEEKGDQLEDVSSLDDQTQNEGERNLQQL 179

Query: 181 REELYKGENAA 191
           REE Y+G++A+
Sbjct: 180 REEHYRGDDAS 190

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496668|ref|XP_002263304.2| PREDICTED: uncharacterized protein LOC100249180 [Vitis vinifera]

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 82/118 (69%), Gaps = 3/118 (2%)

Query: 3   ILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVKSE 62
           + +QS  +N RSKGFKVKH +QICLLL IC WL++QV+ SY++K A+++ +    +V++ 
Sbjct: 2   MFRQSPRRNQRSKGFKVKHAVQICLLLGICIWLIYQVKSSYEKKAAFDKSSQISGKVQNG 61

Query: 63  HEGIKLGRKDVRLPVQQVTLEGERQ---EVDETEVDETKKAKPEESKDEGGGGGDDEI 117
           +E  KLGRKD+   +++  ++ + Q   E +E    E + +KPEE++D G GGGDDE+
Sbjct: 62  NEIPKLGRKDLNPQLEERGIKDDMQRGEEEEEENRTEEEPSKPEENEDIGKGGGDDEV 119

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147800906|emb|CAN62370.1| hypothetical protein VITISV_001849 [Vitis vinifera]

 Score = 99.0 bits (245), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/138 (49%), Positives = 91/138 (65%), Gaps = 3/138 (2%)

Query: 2   TILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSE-VK 60
            +L+QS S+N RSKGFK+K  LQIC+LL IC WLL+QV K +  K AY+  T   SE V 
Sbjct: 124 IMLRQSPSRNQRSKGFKLKPVLQICVLLVICIWLLYQV-KHFGDKMAYKGSTKRISEKVG 182

Query: 61  SEHEGIKLGRKDVRLPVQQVTLEGERQ-EVDETEVDETKKAKPEESKDEGGGGGDDEIDG 119
           S HE  +LGRKD+   + +  LE ER  E  E   DE ++++ EE+ DE  G GDDE+DG
Sbjct: 183 SGHEIRRLGRKDLHPELVEEGLENERHGEGKEDPEDEEEESRAEENGDEARGAGDDEMDG 242

Query: 120 NEQDKSEEEEPEEVEDLI 137
            +QD+ EEEE ++ ED +
Sbjct: 243 RDQDRLEEEESDQGEDFV 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429143|ref|XP_002274729.1| PREDICTED: uncharacterized protein LOC100259947 isoform 1 [Vitis vinifera] gi|359475528|ref|XP_003631696.1| PREDICTED: uncharacterized protein LOC100259947 isoform 2 [Vitis vinifera]

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 87/153 (56%), Gaps = 28/153 (18%)

Query: 4   LKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTA-TQSEVKSE 62
           + +S S+N RSKGFKVKH LQICLLLA+CFWL++QV+ S+D+KK ++   A   S  +  
Sbjct: 1   MFKSPSRNQRSKGFKVKHILQICLLLAVCFWLIYQVKHSHDKKKEFDANDAKISSNTQGG 60

Query: 63  HEGIKLGRKDVRLPV---------------------------QQVTLEGERQEVDETEVD 95
           +E +K GRKD+   V                            +   E E +E    E  
Sbjct: 61  NELLKFGRKDLHPRVDGEAKNEKHGEEETEEEDEAGGVEEEESKHDEEQEEEESKHDEEQ 120

Query: 96  ETKKAKPEESKDEGGGGGDDEIDGNEQDKSEEE 128
           E +++K +E +DEG GGGDDEID N+Q+++E E
Sbjct: 121 EEEESKVDEREDEGRGGGDDEIDENDQERAEGE 153

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097204|ref|XP_002310875.1| predicted protein [Populus trichocarpa] gi|222853778|gb|EEE91325.1| predicted protein [Populus trichocarpa]

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/133 (45%), Positives = 87/133 (65%), Gaps = 10/133 (7%)

Query: 7   SSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVKSEHEGI 66
           S  +N RSKGFKVKH LQICLL+ +C WLL+QV+ S+D+K AYE+   T+++V      +
Sbjct: 5   SPRRNQRSKGFKVKHALQICLLIGVCGWLLYQVKHSHDKKAAYEKSVKTENDV------V 58

Query: 67  KLGRKDVRLPVQQVTLEGERQ-EVDETEVDETKKAKPEESKDEGGGGGDDEIDGNEQDKS 125
           KLGRKD++  V++  +  ER  E +E E    +++KP+++   G  GGDDEI  +  DK+
Sbjct: 59  KLGRKDLQPEVKENFIGDERHKEEEEEESKSEEESKPDDNT--GTEGGDDEIHDHFHDKT 116

Query: 126 EEEEPEEVEDLID 138
            EE  E  ED ID
Sbjct: 117 -EEGAERREDSID 128

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745702|emb|CBI41024.3| unnamed protein product [Vitis vinifera]

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 54/72 (75%)

Query: 3  ILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVKSE 62
          + +QS  +N RSKGFKVKH +QICLLL IC WL++QV+ SY++K A+++ +    +V++ 
Sbjct: 1  MFRQSPRRNQRSKGFKVKHAVQICLLLGICIWLIYQVKSSYEKKAAFDKSSQISGKVQNG 60

Query: 63 HEGIKLGRKDVR 74
          +E  KLGRKD+ 
Sbjct: 61 NEIPKLGRKDLN 72

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540315|ref|XP_003538635.1| PREDICTED: uncharacterized protein LOC100798137 [Glycine max]

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 55/73 (75%), Gaps = 1/73 (1%)

Query: 3  ILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQS-EVKS 61
          ++K+S S+N RSKG KVKH LQI LLL +CFWL++QV+ S+D+KK +EE  A  S   ++
Sbjct: 1  MIKRSPSRNNRSKGIKVKHVLQIILLLGVCFWLIYQVKHSHDKKKEFEENDAKVSVGTQT 60

Query: 62 EHEGIKLGRKDVR 74
           ++ +KLGRKD+ 
Sbjct: 61 AYQTLKLGRKDLH 73

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562138|ref|XP_002522077.1| Pinin, putative [Ricinus communis] gi|223538676|gb|EEF40277.1| Pinin, putative [Ricinus communis]

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 55/75 (73%), Gaps = 2/75 (2%)

Query: 3  ILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQS-EVKS 61
          ++K++ S+N RSKGFKVKH LQICLLL +CFWL++QV+ S+D+KK +++  A  S   +S
Sbjct: 1  MIKRTPSRNTRSKGFKVKHVLQICLLLGVCFWLIYQVKHSHDKKKEFDQKDAKLSVRTQS 60

Query: 62 EHEGIKLGRKDVRLP 76
            +   LGRK + LP
Sbjct: 61 TDDITNLGRKGL-LP 74

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736385|emb|CBI25108.3| unnamed protein product [Vitis vinifera]

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 1/69 (1%)

Query: 6  QSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTA-TQSEVKSEHE 64
          +S S+N RSKGFKVKH LQICLLLA+CFWL++QV+ S+D+KK ++   A   S  +  +E
Sbjct: 3  KSPSRNQRSKGFKVKHILQICLLLAVCFWLIYQVKHSHDKKKEFDANDAKISSNTQGGNE 62

Query: 65 GIKLGRKDV 73
           +K GRKD+
Sbjct: 63 LLKFGRKDL 71

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
TAIR|locus:2134208	472	AT4G33740 "AT4G33740" [Arabido	0.471	0.192	0.453	1.2e-15
TAIR|locus:504955937	734	AT2G22795 "AT2G22795" [Arabido	0.440	0.115	0.402	8.5e-12
TAIR|locus:2137544	532	AT4G37820 "AT4G37820" [Arabido	0.404	0.146	0.382	6.4e-11

TAIR|locus:2134208 AT4G33740 "AT4G33740" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
 Identities = 44/97 (45%), Positives = 64/97 (65%)

Query:     4 LKQSSSKNLR-SKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVK-S 61
             +K++S+++ R SKG K KH LQIC+LL +C WL++QV+ S+D+KK + E    +S V  S
Sbjct:     1 MKKTSTRSQRGSKGIKGKHVLQICVLLGVCIWLIYQVKYSHDKKKEFYEKDVEKSTVLLS 60

Query:    62 EHEG--IKLGRKDVRLPVQQVTLEGERQEVDETEVDE 96
             E E   +KLGRKD+ LP      E E+  V+E E +E
Sbjct:    61 EVEDGVVKLGRKDL-LPKNYNQKENEKH-VEEDEDEE 95

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:504955937 AT2G22795 "AT2G22795" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
 Identities = 39/97 (40%), Positives = 59/97 (60%)

Query:     3 ILKQSSSKNLRSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVKSE 62
             + + S  +  RSKGFKVKH +Q+ LLL++  WLL+QV+ S+++K  +EE  + +  V   
Sbjct:     1 MFRSSPRRGQRSKGFKVKHCIQLTLLLSVGIWLLYQVKHSHEKKAQFEE--SAKIVVGGV 58

Query:    63 HEGIKLGRKDVRLPVQQVTLEGERQEVDETEVDETKK 99
              + +KLGRKD+   + +V       EVDE E DE  K
Sbjct:    59 DKVVKLGRKDL---IPRVV------EVDEAE-DEGSK 85

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2137544 AT4G37820 "AT4G37820" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
 Identities = 31/81 (38%), Positives = 52/81 (64%)

Query:    13 RSKGFKVKHFLQICLLLAICFWLLHQVRKSYDRKKAYEEGTATQSEVKSEHEGIKLGRKD 72
             RSKG KVKH +Q+ LLL +  WL++Q++ S++ KKA  EGT+       ++  + LGRKD
Sbjct:    10 RSKGIKVKHCIQLTLLLGVGIWLIYQMKHSHE-KKAEFEGTSKIVVDDIDNTVVNLGRKD 68

Query:    73 VRLPVQQVTLEGERQEVDETE 93
             +R  +++   +  + EV++ E
Sbjct:    69 LRPRIEET--KDVKDEVEDEE 87

GO:0003674 "molecular_function" evidence=ND

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	193
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	1e-06
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	8e-05
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	6e-04
pfam04147	809	pfam04147, Nop14, Nop14-like family	0.001
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	0.002
pfam03344	715	pfam03344, Daxx, Daxx Family	0.004

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 47.3 bits (112), Expect = 1e-06
 Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 5/102 (4%)

Query: 55  TQSEVKSEHEGIKLGRKDVRLPVQQVTLEGERQEVDETEVDETKKAKPEESK-DEGGGGG 113
             +E K EHEG     +      Q  T   + +  DET   E       E+K DE G  G
Sbjct: 795 EGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDG 854

Query: 114 DDEIDGNEQDKSEEEEPEEVEDLIDEEDREREEETAEQESEE 155
               DG + ++ EEEE EE E    EE+ E EEE  E+E+EE
Sbjct: 855 GGGSDGGDSEEEEEEEEEEEE----EEEEEEEEEEEEEENEE 892

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 42.3 bits (99), Expect = 8e-05
 Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 8/129 (6%)

Query: 44  DRKKAYEEGTATQSEVKSEHEGIKLGRKDVRL-----PVQQVTLEGERQEVDETEVDETK 98
           DRK+   EG       + E EG     +D  +        +V  EGE +  ++ E +   
Sbjct: 760 DRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQS 819

Query: 99  KAKPEESKDEGGGGGDDEIDGNEQDKSEEE---EPEEVEDLIDEEDREREEETAEQESEE 155
           + + ++++ +   G  +    N+ +  ++E   +     D  D E+ E EEE  E+E EE
Sbjct: 820 ETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEE 879

Query: 156 AENQLEDES 164
            E + E+E 
Sbjct: 880 EEEEEEEEE 888

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 39.6 bits (92), Expect = 6e-04
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 18/148 (12%)

Query: 51  EGTATQSEVKSEHEGIKLGRKDVRLPVQQVTLEGERQ-EVDETEVDETKKAKPEESKDEG 109
           EGT  + E+++  EG ++  +       +   E E + +  ETE +   +A+ +E +DEG
Sbjct: 724 EGTEDEGEIETGEEGEEVEDEGEG--EAEGKHEVETEGDRKETEHEGETEAEGKEDEDEG 781

Query: 110 -----GGG---GDDEIDGNEQDKSEEEEPEEVEDLIDEE----DREREEETAEQESEEAE 157
                  G   GD+  +G  + + E E  E+ E     E    D E ++ET EQE   AE
Sbjct: 782 EIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQEL-NAE 840

Query: 158 NQLE--DESLLLNPVHYGDGSSSEAREE 183
           NQ E   +   ++     DG  SE  EE
Sbjct: 841 NQGEAKQDEKGVDGGGGSDGGDSEEEEE 868

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|217927 pfam04147, Nop14, Nop14-like family

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 22/80 (27%), Positives = 38/80 (47%)

Query: 86  RQEVDETEVDETKKAKPEESKDEGGGGGDDEIDGNEQDKSEEEEPEEVEDLIDEEDRERE 145
           R E ++ E +E  K   ++  DE     DD     + ++ EEEE + V+D  +E+D +  
Sbjct: 283 RGEEEDDEEEEDSKESADDLDDEFEPDDDDNFGLGQGEEDEEEEEDGVDDEDEEDDDDDL 342

Query: 146 EETAEQESEEAENQLEDESL 165
           EE  E      E + E++  
Sbjct: 343 EEEEEDVDLSDEEEDEEDED 362

Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production. Length = 809

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 83  EGERQEVDETEVDETK---KAKPEESKDEGGGGGDDEIDGNEQDKSEEEEPEEVEDLIDE 139
           E + ++  E E++  +   K + E  + E  G  + E   +E +    EE EEVED  + 
Sbjct: 688 ERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEG 747

Query: 140 EDREREEETAEQESEEAENQLEDESLLLNPVHYGDGSSSEAREELYKGENAA 191
           E   + E   E + +E E++ E E+        G+  + E  E   KG+  A
Sbjct: 748 EAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGE--MKGDEGA 797

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|217503 pfam03344, Daxx, Daxx Family

 Score = 37.2 bits (86), Expect = 0.004
 Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 8/111 (7%)

Query: 78  QQVTLEGERQEVDETEVDETKKAKPEESKDEGGGG-----GDDEIDGNEQDKSEEEEPEE 132
           Q  T E ER++  E E   T     + SK     G        E +  E  + EEEE EE
Sbjct: 395 QDDTEEEERRKRQERERQGTSSRSSDPSKASSTSGESPSMASQESEEEESVEEEEEEEEE 454

Query: 133 VEDLIDEEDREREEETAEQESEEAENQLEDESLLLNPVHYGDGSSSEAREE 183
            E+   E + E  E+  E+E  EA+N  E+E   +     GDG   E  E+
Sbjct: 455 EEEEEQESEEEEGEDEEEEEEVEADNGSEEE---MEGSSEGDGDGEEPEED 502

The Daxx protein (also known as the Fas-binding protein) is thought to play a role in apoptosis, but precise role played by Daxx remains to be determined. Daxx forms a complex with Axin. Length = 715

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	193
PF15339	200	Afaf: Acrosome formation-associated factor	82.85
PF10828	110	DUF2570: Protein of unknown function (DUF2570); In	80.85
PF03908	92	Sec20: Sec20; InterPro: IPR005606 Sec20 is a membr	80.04

>PF15339 Afaf: Acrosome formation-associated factor

Probab=82.85  E-value=1.2  Score=38.79  Aligned_cols=25  Identities=20%  Similarity=0.340  Sum_probs=19.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhh
Q 029466           21 HFLQICLLLAICFWLLHQVRKSYDR   45 (193)
Q Consensus        21 h~LQI~lLl~VciWLlYQvkhS~dk   45 (193)
                      .+|-.++|||+|+-.||-|||-..|
T Consensus       140 Tl~lfv~Ll~~c~atlyklk~l~~k  164 (200)
T PF15339_consen  140 TLFLFVILLAFCSATLYKLKHLSYK  164 (200)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccc
Confidence            3444466899999999999997666

>PF10828 DUF2570: Protein of unknown function (DUF2570); InterPro: IPR022538 This entry is represented by Bacteriophage IME08, pseT

Probab=80.85  E-value=1.9  Score=33.19  Aligned_cols=22  Identities=23%  Similarity=0.308  Sum_probs=16.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhh
Q 029466           20 KHFLQICLLLAICFWLLHQVRK   41 (193)
Q Consensus        20 Kh~LQI~lLl~VciWLlYQvkh   41 (193)
                      ..+.=++|+||.|.|+.||-..
T Consensus         5 ~~~~l~~lvl~L~~~l~~qs~~   26 (110)
T PF10828_consen    5 IYIALAVLVLGLGGWLWYQSQR   26 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            3444578889999999998644

3. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This is a family of proteins with unknown function.

>PF03908 Sec20: Sec20; InterPro: IPR005606 Sec20 is a membrane glycoprotein associated with secretory pathway

Probab=80.04  E-value=1.9  Score=31.87  Aligned_cols=19  Identities=16%  Similarity=0.483  Sum_probs=15.1

Q ss_pred             hHHHHHHHHHHHHHHHHHH
Q 029466           20 KHFLQICLLLAICFWLLHQ   38 (193)
Q Consensus        20 Kh~LQI~lLl~VciWLlYQ   38 (193)
                      --++-++++++||+|+||.
T Consensus        72 li~~~~~~f~~~v~yI~~r   90 (92)
T PF03908_consen   72 LIFFAFLFFLLVVLYILWR   90 (92)
T ss_pred             HHHHHHHHHHHHHHHHhhh
Confidence            3456678899999999985

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00