Citrus Sinensis ID: 029475

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190---
Protein Sequence
MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Secondary Structure (PSIPRED)
cHHccHHHcccccccEEEEEEEEEEEEEEEEEEEccccEEEEEEEEcccccccccEEEEEEEEcccccccccccccEEEEEcccEEEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEEEEccccccccEEEEEEEcccEEEEEEEEEccHHHHHHHHHHHHccEEEHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccEEEEEEEEEEccccEEEcccccccccccccccccccccEEEEEEEcccccccccccccccccEEEccccccEEEEEEEEEEEEEEEcccEEEEEcEEEEEEEEEEcccccccccEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MIKKVKHALesgegcrvygVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIhdlsfgpkypgihnpldgtvrmlhdtsgtfkYYIKIvpteyryiskdvlptnqfsvTEYFSTINefdrtwpavyflydlspitvTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTkpsarsvlr
Flexible Loop (DISEMBL)
mikkvkhalesgegcrvYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEaltkpsarsvlr
Low Complexity Region (SEG)
MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Disordered region (IsUnstruct)
***********GEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL**********
Disordered Region (DISOPRED)
**K*********EGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFS******RTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL**********
Disordered Region (DISEMBL)
MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK********
Disordered Region (DISPRO)
*****K****SGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPS******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	193	2.2.26 [Sep-21-2011]
Q66KH2	389	Endoplasmic reticulum-Gol	N/A	no	0.922	0.457	0.419	4e-37
Q6NVS2	384	Endoplasmic reticulum-Gol	yes	no	0.932	0.468	0.419	1e-36
Q4R8X1	382	Endoplasmic reticulum-Gol	N/A	no	0.932	0.471	0.419	1e-36
Q9Y282	383	Endoplasmic reticulum-Gol	yes	no	0.932	0.469	0.419	1e-36
Q5R8G3	383	Endoplasmic reticulum-Gol	yes	no	0.932	0.469	0.419	1e-36
Q5EAE0	383	Endoplasmic reticulum-Gol	yes	no	0.932	0.469	0.419	2e-36
Q9CQE7	383	Endoplasmic reticulum-Gol	yes	no	0.932	0.469	0.419	2e-36
Q803I2	383	Endoplasmic reticulum-Gol	yes	no	0.932	0.469	0.413	3e-35
Q54DW2	383	Probable endoplasmic reti	yes	no	0.901	0.454	0.383	1e-32
Q4V8Y6	290	Endoplasmic reticulum-Gol	no	no	0.906	0.603	0.349	4e-25

>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus laevis GN=ergic3 PE=2 SV=1

 Score =  154 bits (389), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 81/193 (41%), Positives = 114/193 (59%), Gaps = 15/193 (7%)

Query: 6   KHALESGEGCRVYGVLDVQRVAGNFH-----------ISVHGLNIYVAQMIFGGAKNVNV 54
           K   +  EGC+VYG L+V +VAGNFH           + VH + I+  Q    G  N+N+
Sbjct: 191 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQSF--GLDNINM 248

Query: 55  SHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSV 114
           +H I  LSFG  YPG+ NPLDGT  +   +S  F+Y++KIVPT Y  +  +VL TNQFSV
Sbjct: 249 THEIKHLSFGKDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQFSV 308

Query: 115 TEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 172
           T +    N    D+  P V+ LY+LSP+ V   E+ RSF H +T +CA++GG F + G++
Sbjct: 309 TRHEKMTNGLIGDQGLPGVFVLYELSPMMVKFTEKHRSFTHFLTGVCAIIGGVFTVAGLI 368

Query: 173 DRWMYRLLEALTK 185
           D  +Y    A+ K
Sbjct: 369 DSLIYYSTRAIQK 381

Possible role in transport between endoplasmic reticulum and Golgi.
Xenopus laevis (taxid: 8355)

>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1

 Score =  152 bits (385), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 113/186 (60%), Gaps = 6/186 (3%)

Query: 6   KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
           K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  L
Sbjct: 191 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHEIRHL 250

Query: 62  SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
           SFG  YPG+ NPLDG+      +S  F+Y++KIVPT Y  +  +VL TNQFSVT +    
Sbjct: 251 SFGRDYPGLVNPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQFSVTRHEKMT 310

Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
           N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y  
Sbjct: 311 NGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGVFTVAGLIDSLVYYS 370

Query: 180 LEALTK 185
             A+ K
Sbjct: 371 TRAIQK 376

Possible role in transport between endoplasmic reticulum and Golgi.

Xenopus tropicalis (taxid: 8364)

>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1

 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 6/186 (3%)

Query: 6   KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
           K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  L
Sbjct: 189 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHL 248

Query: 62  SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
           SFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    
Sbjct: 249 SFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA 308

Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
           N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y  
Sbjct: 309 NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHS 368

Query: 180 LEALTK 185
             A+ K
Sbjct: 369 ARAIQK 374

Possible role in transport between endoplasmic reticulum and Golgi.

Macaca fascicularis (taxid: 9541)

>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Homo sapiens GN=ERGIC3 PE=1 SV=1

 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 6/186 (3%)

Query: 6   KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
           K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  L
Sbjct: 190 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHL 249

Query: 62  SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
           SFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    
Sbjct: 250 SFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA 309

Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
           N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y  
Sbjct: 310 NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHS 369

Query: 180 LEALTK 185
             A+ K
Sbjct: 370 ARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Homo sapiens (taxid: 9606)

>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Pongo abelii GN=ERGIC3 PE=2 SV=1

 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 6/186 (3%)

Query: 6   KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
           K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  L
Sbjct: 190 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHL 249

Query: 62  SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
           SFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    
Sbjct: 250 SFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA 309

Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
           N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y  
Sbjct: 310 NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHS 369

Query: 180 LEALTK 185
             A+ K
Sbjct: 370 ARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Pongo abelii (taxid: 9601)

>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Bos taurus GN=ERGIC3 PE=2 SV=1

 Score =  151 bits (382), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 6/186 (3%)

Query: 6   KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
           K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  L
Sbjct: 190 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIRHL 249

Query: 62  SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
           SFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    
Sbjct: 250 SFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA 309

Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
           N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y  
Sbjct: 310 NGLMGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHS 369

Query: 180 LEALTK 185
             A+ K
Sbjct: 370 ARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Bos taurus (taxid: 9913)

>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus GN=Ergic3 PE=2 SV=1

 Score =  151 bits (382), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 111/186 (59%), Gaps = 6/186 (3%)

Query: 6   KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
           K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  L
Sbjct: 190 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHL 249

Query: 62  SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
           SFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    
Sbjct: 250 SFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVA 309

Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
           N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y  
Sbjct: 310 NGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHS 369

Query: 180 LEALTK 185
             A+ K
Sbjct: 370 ARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Mus musculus (taxid: 10090)

>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1

 Score =  147 bits (372), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 110/186 (59%), Gaps = 6/186 (3%)

Query: 6   KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDL 61
           K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  L
Sbjct: 190 KMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHFIKHL 249

Query: 62  SFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI 121
           SFG  YPGI NPLD T       S  ++Y++KIVPT Y     +V+ TNQFSVT +    
Sbjct: 250 SFGKDYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKTNQFSVTRHEKIA 309

Query: 122 NEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRL 179
           N    D+  P V+ LY+LSP+ V   E++RSF H +T +CA++GG F + G++D  +Y  
Sbjct: 310 NGLIGDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFTVAGLIDSLIYHS 369

Query: 180 LEALTK 185
             A+ K
Sbjct: 370 ARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3 SV=1

 Score =  139 bits (350), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/185 (38%), Positives = 112/185 (60%), Gaps = 11/185 (5%)

Query: 10  ESGEGCRVYGVLDVQRVAGNFHIS------VHGLNIYVAQMIFGGAKNVNVSHVIHDLSF 63
           ++GEGC+VYG + V +VAGNFH +       H ++++  Q    G+   NVSH I+ LSF
Sbjct: 193 QNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGS--FNVSHTINRLSF 250

Query: 64  GPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI-- 121
           G  +PGI NPLD   +      G F+Y++K+VPT Y  ++ + + TNQ+SVTE++  +  
Sbjct: 251 GNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQYSVTEHYRLLAK 310

Query: 122 -NEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
             E     P ++F+YDLSPI + + E  +SF   +T +CA++GG F + G+ D ++Y   
Sbjct: 311 KGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVFGIFDSFIYYST 370

Query: 181 EALTK 185
           + L K
Sbjct: 371 KNLQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Danio rerio GN=ergic1 PE=2 SV=1

 Score =  114 bits (285), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 14/189 (7%)

Query: 3   KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLS 62
             +K  L +G GCR  G   + +V GNFH+S H      AQ      ++ +++H+IH L+
Sbjct: 103 NSMKVPLNNGHGCRFEGEFSINKVPGNFHVSTHSA---TAQ-----PQSPDMTHIIHKLA 154

Query: 63  FGPKYP-----GIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVT-E 116
           FG K       G  N L G  R+  +   +  Y +KIVPT Y  +      + Q++V  +
Sbjct: 155 FGAKLQVQHVQGAFNALGGADRLQSNALASHDYILKIVPTVYEELGGKQRFSYQYTVANK 214

Query: 117 YFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM 176
            +   +   R  PA++F YDLSPITV   E RR F   IT +CA++GGTF + G++D  +
Sbjct: 215 EYVAYSHTGRIIPAIWFRYDLSPITVKYTERRRPFYRFITTICAIIGGTFTVAGIIDSCI 274

Query: 177 YRLLEALTK 185
           +   EA  K
Sbjct: 275 FTASEAWKK 283

Possible role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
224086657	351	predicted protein [Populus trichocarpa]	1.0	0.549	0.896	1e-100
118482697	366	unknown [Populus trichocarpa]	0.984	0.519	0.894	1e-97
224137484	351	predicted protein [Populus trichocarpa]	0.984	0.541	0.894	1e-97
356547537	351	PREDICTED: probable endoplasmic reticulu	0.979	0.538	0.883	1e-97
225446891	351	PREDICTED: endoplasmic reticulum-Golgi i	1.0	0.549	0.870	4e-97
356575088	347	PREDICTED: endoplasmic reticulum-Golgi i	0.979	0.544	0.878	6e-97
255563175	191	Endoplasmic reticulum-Golgi intermediate	0.979	0.989	0.883	1e-96
255637400	347	unknown [Glycine max]	0.979	0.544	0.873	2e-96
30686584	354	Endoplasmic reticulum vesicle transporte	0.984	0.536	0.874	7e-96
297830940	354	hypothetical protein ARALYDRAFT_479742 [	0.974	0.531	0.877	9e-96

>gi|224086657|ref|XP_002307923.1| predicted protein [Populus trichocarpa] gi|222853899|gb|EEE91446.1| predicted protein [Populus trichocarpa]

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 173/193 (89%), Positives = 184/193 (95%)

Query: 1   MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
           M+KKVK AL +GEGCRVYGVLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHD
Sbjct: 159 MVKKVKQALANGEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHD 218

Query: 61  LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
           LSFGPKYPGIHNPLDGT R+LH+TSGTFKYYIKIVPTEYRYISK+VLPTNQFSVTEYFS 
Sbjct: 219 LSFGPKYPGIHNPLDGTTRILHETSGTFKYYIKIVPTEYRYISKEVLPTNQFSVTEYFSP 278

Query: 121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
           + +FDRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCAVLGGTFALTGMLDRWM RLL
Sbjct: 279 MTDFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMCRLL 338

Query: 181 EALTKPSARSVLR 193
           EALTKP+ RSVLR
Sbjct: 339 EALTKPNPRSVLR 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482697|gb|ABK93267.1| unknown [Populus trichocarpa]

 Score =  360 bits (925), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 170/190 (89%), Positives = 179/190 (94%)

Query: 1   MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
           MIKKVK AL +GEGCRVYGVLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHD
Sbjct: 174 MIKKVKQALANGEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHD 233

Query: 61  LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
           LSFGPKYPGIHNPLDGT R+L +TSG FKYYIKIVPTEYRYISKDVLPTNQFSVTEYFS 
Sbjct: 234 LSFGPKYPGIHNPLDGTARILRETSGIFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSP 293

Query: 121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
           I +FDRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCA+LGGTFALTGMLDRWMYRLL
Sbjct: 294 ITDFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAILGGTFALTGMLDRWMYRLL 353

Query: 181 EALTKPSARS 190
           EALTKP+  S
Sbjct: 354 EALTKPNRGS 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137484|ref|XP_002322569.1| predicted protein [Populus trichocarpa] gi|222867199|gb|EEF04330.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (925), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 170/190 (89%), Positives = 179/190 (94%)

Query: 1   MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
           MIKKVK AL +GEGCRVYGVLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHD
Sbjct: 159 MIKKVKQALANGEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHD 218

Query: 61  LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
           LSFGPKYPGIHNPLDGT R+L +TSG FKYYIKIVPTEYRYISKDVLPTNQFSVTEYFS 
Sbjct: 219 LSFGPKYPGIHNPLDGTARILRETSGIFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSP 278

Query: 121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
           I +FDRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCA+LGGTFALTGMLDRWMYRLL
Sbjct: 279 ITDFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAILGGTFALTGMLDRWMYRLL 338

Query: 181 EALTKPSARS 190
           EALTKP+  S
Sbjct: 339 EALTKPNRGS 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547537|ref|XP_003542168.1| PREDICTED: probable endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Glycine max]

 Score =  360 bits (924), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 167/189 (88%), Positives = 180/189 (95%)

Query: 1   MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
           +IKKVK AL++GEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHD
Sbjct: 162 IIKKVKEALKNGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHD 221

Query: 61  LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
           LSFGPKYPG+HNPLD T R+LHDTSGTFKYYIK+VPTEYRYISK+VLPTNQFSV+EY+S 
Sbjct: 222 LSFGPKYPGLHNPLDDTTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSP 281

Query: 121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
           IN+FDRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCAVLGGTFA+TGMLDRWMYRLL
Sbjct: 282 INQFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLL 341

Query: 181 EALTKPSAR 189
           EALTK  ++
Sbjct: 342 EALTKSKSK 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446891|ref|XP_002284045.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Vitis vinifera] gi|296086333|emb|CBI31774.3| unnamed protein product [Vitis vinifera]

 Score =  358 bits (920), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 168/193 (87%), Positives = 180/193 (93%)

Query: 1   MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
           M+KKVK AL +GEGCRVYGVLDVQRVAGNFHISVHGLNI+VAQMIF GA +VNVSH+IHD
Sbjct: 159 MVKKVKQALANGEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAIHVNVSHIIHD 218

Query: 61  LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
           LSFGPKYPG+HNPLDGTVR+L   SGTFKYYIKIVPTEYRYISK+VLPTNQFSV EYFS 
Sbjct: 219 LSFGPKYPGLHNPLDGTVRILRGASGTFKYYIKIVPTEYRYISKEVLPTNQFSVMEYFSP 278

Query: 121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
           +NEFDRTWPAVYFLYDLSP+TVTIKEERRSFLH ITRLCAVLGGTFALTGMLDRWMYR L
Sbjct: 279 MNEFDRTWPAVYFLYDLSPVTVTIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMYRFL 338

Query: 181 EALTKPSARSVLR 193
           E LTKP+A+SV R
Sbjct: 339 EMLTKPNAKSVYR 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575088|ref|XP_003555674.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Glycine max]

 Score =  358 bits (919), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 166/189 (87%), Positives = 179/189 (94%)

Query: 1   MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
           +IKKVK AL++GEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHD
Sbjct: 158 IIKKVKEALKNGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHD 217

Query: 61  LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
           LSFGPKYPG+HNPLD T R+LHDTSGTFKYYIK+VPTEYRYISK+VLPTNQFSV+EY+S 
Sbjct: 218 LSFGPKYPGLHNPLDDTTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSP 277

Query: 121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
           IN+FDRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCAVLGGTFA+TGMLDRWMYRLL
Sbjct: 278 INQFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLL 337

Query: 181 EALTKPSAR 189
           E LTK  ++
Sbjct: 338 ETLTKSKSK 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563175|ref|XP_002522591.1| Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus communis] gi|223538182|gb|EEF39792.1| Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus communis]

 Score =  357 bits (916), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 167/189 (88%), Positives = 180/189 (95%)

Query: 1   MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
           MIKKVK AL +GEGCRVYGVLDVQRVAGNFHISVHGLNI+VAQMIF GA +VNVSH+IHD
Sbjct: 1   MIKKVKQALANGEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAIHVNVSHIIHD 60

Query: 61  LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
           LSFGPK+PG+HNPLDGT R+LHD SGTFKYYIKIVPTEYRYISK+VLPTNQFSVTEYFS 
Sbjct: 61  LSFGPKFPGLHNPLDGTARILHDASGTFKYYIKIVPTEYRYISKEVLPTNQFSVTEYFSP 120

Query: 121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
           ++E+DRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCAVLGGTFALTGMLDRWMYRLL
Sbjct: 121 MSEYDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMYRLL 180

Query: 181 EALTKPSAR 189
           EA+TKP+ R
Sbjct: 181 EAVTKPNTR 189

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637400|gb|ACU19028.1| unknown [Glycine max]

 Score =  356 bits (914), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 165/189 (87%), Positives = 178/189 (94%)

Query: 1   MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
           +IKKVK AL++GEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHD
Sbjct: 158 IIKKVKEALKNGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHD 217

Query: 61  LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
           LSFGPKYPG+HNPLD T R+LHDTSGTFKYYIK+VPTEYRYISK+VLPTNQFSV+EY+S 
Sbjct: 218 LSFGPKYPGLHNPLDDTTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSP 277

Query: 121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
           IN+FDRTWPAVYFLYDLSPITVTIKEERRSF H ITRLCAVLGGTFA+TGMLDRWMYRLL
Sbjct: 278 INQFDRTWPAVYFLYDLSPITVTIKEERRSFFHFITRLCAVLGGTFAVTGMLDRWMYRLL 337

Query: 181 EALTKPSAR 189
           E LTK  ++
Sbjct: 338 ETLTKSKSK 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686584|ref|NP_188868.2| Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana] gi|13877821|gb|AAK43988.1|AF370173_1 unknown protein [Arabidopsis thaliana] gi|51969000|dbj|BAD43192.1| unknown protein [Arabidopsis thaliana] gi|51970108|dbj|BAD43746.1| unknown protein [Arabidopsis thaliana] gi|51970556|dbj|BAD43970.1| unknown protein [Arabidopsis thaliana] gi|51970734|dbj|BAD44059.1| unknown protein [Arabidopsis thaliana] gi|62319967|dbj|BAD94071.1| hypothetical protein [Arabidopsis thaliana] gi|332643097|gb|AEE76618.1| Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana]

 Score =  355 bits (910), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 167/191 (87%), Positives = 178/191 (93%), Gaps = 1/191 (0%)

Query: 1   MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
           MIKKVK AL  GEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHD
Sbjct: 164 MIKKVKQALADGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHD 223

Query: 61  LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
           LSFGPKYPGIHNPLD T R+LHDTSGTFKYYIKIVPTEYRY+SKDVL TNQ+SVTEYF+ 
Sbjct: 224 LSFGPKYPGIHNPLDDTNRILHDTSGTFKYYIKIVPTEYRYLSKDVLSTNQYSVTEYFTP 283

Query: 121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
           + EFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM+R +
Sbjct: 284 MTEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMFRFI 343

Query: 181 EALT-KPSARS 190
           E+   KPS R+
Sbjct: 344 ESFNKKPSTRA 354

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830940|ref|XP_002883352.1| hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata] gi|297329192|gb|EFH59611.1| hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata]

 Score =  354 bits (909), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 165/188 (87%), Positives = 177/188 (94%)

Query: 1   MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
           MIKKVK AL  GEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHD
Sbjct: 164 MIKKVKQALADGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHD 223

Query: 61  LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
           LSFGPKYPGIHNPLD T R+LHDTSGTFKYYIKIVPTEYRY+SKDVL TNQ+SVTEY++ 
Sbjct: 224 LSFGPKYPGIHNPLDDTNRILHDTSGTFKYYIKIVPTEYRYLSKDVLSTNQYSVTEYYTP 283

Query: 121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
           + EFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM+RL+
Sbjct: 284 MTEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMFRLI 343

Query: 181 EALTKPSA 188
           E+  K S+
Sbjct: 344 ESFNKKSS 351

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	193
TAIR|locus:2087817	354	AT3G22290 "AT3G22290" [Arabido	0.984	0.536	0.874	2.8e-89
UNIPROTKB|Q5EAE0	383	ERGIC3 "Endoplasmic reticulum-	0.911	0.459	0.423	1.5e-35
UNIPROTKB|Q9Y282	383	ERGIC3 "Endoplasmic reticulum-	0.911	0.459	0.423	1.5e-35
MGI|MGI:1913616	383	Ergic3 "ERGIC and golgi 3" [Mu	0.911	0.459	0.423	1.9e-35
TAIR|locus:2034330	489	AT1G36050 "AT1G36050" [Arabido	0.937	0.370	0.410	3.1e-35
TAIR|locus:2015056	386	AT1G22200 "AT1G22200" [Arabido	0.937	0.468	0.410	4e-35
ZFIN|ZDB-GENE-040426-795	383	ergic3 "ERGIC and golgi 3" [Da	0.911	0.459	0.417	5.8e-34
DICTYBASE|DDB_G0292002	383	ergic3 "endoplasmic reticulum-	0.901	0.454	0.383	1.3e-31
FB|FBgn0036489	373	CG7011 [Drosophila melanogaste	0.886	0.458	0.394	1.2e-26
WB|WBGene00010725	380	erv-46 [Caenorhabditis elegans	0.906	0.460	0.355	1.8e-25

TAIR|locus:2087817 AT3G22290 "AT3G22290" [Arabidopsis thaliana (taxid:3702)]

 Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
 Identities = 167/191 (87%), Positives = 178/191 (93%)

Query:     1 MIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHD 60
             MIKKVK AL  GEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHD
Sbjct:   164 MIKKVKQALADGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHD 223

Query:    61 LSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST 120
             LSFGPKYPGIHNPLD T R+LHDTSGTFKYYIKIVPTEYRY+SKDVL TNQ+SVTEYF+ 
Sbjct:   224 LSFGPKYPGIHNPLDDTNRILHDTSGTFKYYIKIVPTEYRYLSKDVLSTNQYSVTEYFTP 283

Query:   121 INEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
             + EFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM+R +
Sbjct:   284 MTEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMFRFI 343

Query:   181 EALTK-PSARS 190
             E+  K PS R+
Sbjct:   344 ESFNKKPSTRA 354

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|Q5EAE0 ERGIC3 "Endoplasmic reticulum-Golgi intermediate compartment protein 3" [Bos taurus (taxid:9913)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 77/182 (42%), Positives = 110/182 (60%)

Query:    10 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 65
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIRHLSFGE 253

Query:    66 KYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF- 124
              YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N   
Sbjct:   254 DYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLM 313

Query:   125 -DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL 183
              D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+
Sbjct:   314 GDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAI 373

Query:   184 TK 185
              K
Sbjct:   374 QK 375

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9Y282 ERGIC3 "Endoplasmic reticulum-Golgi intermediate compartment protein 3" [Homo sapiens (taxid:9606)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 77/182 (42%), Positives = 110/182 (60%)

Query:    10 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 65
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGE 253

Query:    66 KYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF- 124
              YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N   
Sbjct:   254 DYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLL 313

Query:   125 -DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL 183
              D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+
Sbjct:   314 GDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAI 373

Query:   184 TK 185
              K
Sbjct:   374 QK 375

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

MGI|MGI:1913616 Ergic3 "ERGIC and golgi 3" [Mus musculus (taxid:10090)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 77/182 (42%), Positives = 110/182 (60%)

Query:    10 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 65
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGE 253

Query:    66 KYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF- 124
              YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N   
Sbjct:   254 DYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLL 313

Query:   125 -DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL 183
              D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+
Sbjct:   314 GDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAI 373

Query:   184 TK 185
              K
Sbjct:   374 QK 375

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

TAIR|locus:2034330 AT1G36050 "AT1G36050" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 78/190 (41%), Positives = 119/190 (62%)

Query:     2 IKKVKHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHV 57
             +++VK   E GEGC +YG L+V +VAGNFH     S H   ++V  ++     + N+SH 
Sbjct:   192 LQRVKD--EEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDLLAFQKDSFNISHK 249

Query:    58 IHDLSFGPKYPGIHNPLDGTVRMLHDT-SGTFKYYIKIVPTEYRYISKDVLPTNQFSVTE 116
             I+ L++G  +PG+ NPLD  V    DT +  ++Y+IK+VPT Y  I    + +NQFSVTE
Sbjct:   250 INRLTYGDYFPGVVNPLD-KVEWSQDTPNAMYQYFIKVVPTVYTDIRGHTIQSNQFSVTE 308

Query:   117 YFSTINEFD-RTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRW 175
             +  +      ++ P V+F YDLSPI VT  EE  SFLH +T +CA++GG F ++G++D +
Sbjct:   309 HVKSSEAGQLQSLPGVFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGGVFTVSGIIDAF 368

Query:   176 MYRLLEALTK 185
             +Y   +A+ K
Sbjct:   369 IYHGQKAIKK 378

GO:0003674 "molecular_function" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2015056 AT1G22200 "AT1G22200" [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 78/190 (41%), Positives = 116/190 (61%)

Query:     2 IKKVKHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHV 57
             ++KVK   E GEGC V+G L+V +VAGNFH     S H        M+     N N+SH 
Sbjct:   192 VQKVKD--EEGEGCNVHGFLEVNKVAGNFHFIPGQSFHQSGFQFHDMLLFQQGNYNISHK 249

Query:    58 IHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEY 117
             ++ L+FG  +PG+ NPLDG        SG ++Y+IK+VP+ Y  + ++ + +NQFSVTE+
Sbjct:   250 VNRLAFGDFFPGVVNPLDGVQWNQGKQSGVYQYFIKVVPSIYTDVHQNTIQSNQFSVTEH 309

Query:   118 FSTINEFDRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRW 175
             F  + E  R    P V+F YDLSPI V  +E+   FLH +T +CA++GG F ++G++D +
Sbjct:   310 FQNM-EAGRMQSPPGVFFYYDLSPIKVIFEEQHVEFLHFLTNVCAIVGGIFTVSGIVDSF 368

Query:   176 MYRLLEALTK 185
             +Y    A+ K
Sbjct:   369 IYHGQRAIKK 378

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

ZFIN|ZDB-GENE-040426-795 ergic3 "ERGIC and golgi 3" [Danio rerio (taxid:7955)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 76/182 (41%), Positives = 109/182 (59%)

Query:    10 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 65
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHFIKHLSFGK 253

Query:    66 KYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF- 124
              YPGI NPLD T       S  ++Y++KIVPT Y     +V+ TNQFSVT +    N   
Sbjct:   254 DYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKTNQFSVTRHEKIANGLI 313

Query:   125 -DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL 183
              D+  P V+ LY+LSP+ V   E++RSF H +T +CA++GG F + G++D  +Y    A+
Sbjct:   314 GDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFTVAGLIDSLIYHSARAI 373

Query:   184 TK 185
              K
Sbjct:   374 QK 375

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

DICTYBASE|DDB_G0292002 ergic3 "endoplasmic reticulum-golgi intermediate compartment protein 3" [Dictyostelium discoideum (taxid:44689)]

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 71/185 (38%), Positives = 112/185 (60%)

Query:    10 ESGEGCRVYGVLDVQRVAGNFHISV------HGLNIYVAQMIFGGAKNVNVSHVIHDLSF 63
             ++GEGC+VYG + V +VAGNFH +       H ++++  Q    G+   NVSH I+ LSF
Sbjct:   193 QNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGS--FNVSHTINRLSF 250

Query:    64 GPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI-- 121
             G  +PGI NPLD   +      G F+Y++K+VPT Y  ++ + + TNQ+SVTE++  +  
Sbjct:   251 GNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQYSVTEHYRLLAK 310

Query:   122 -NEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 180
               E     P ++F+YDLSPI + + E  +SF   +T +CA++GG F + G+ D ++Y   
Sbjct:   311 KGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVFGIFDSFIYYST 370

Query:   181 EALTK 185
             + L K
Sbjct:   371 KNLQK 375

GO:0003674 "molecular_function" evidence=ND

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0036489 CG7011 [Drosophila melanogaster (taxid:7227)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 71/180 (39%), Positives = 101/180 (56%)

Query:    13 EGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAK--NVNVSHVIHDLSFGPK--YP 68
             EGCR+ G L+V R+AG+FH +  G +  + Q      +  NV +SH I+ LSFG K  + 
Sbjct:   188 EGCRIQGHLEVNRMAGSFHFAP-GKSFSIRQFHIHDFQFSNVKLSHTINHLSFGEKIEFA 246

Query:    69 GIHNPLDGT-VRMLHDTSGTFKYYIKIVPTEYRYISKDVLP--TNQFSVTEYFSTINEFD 125
               H PLDG  V +    S  F YY+KIVPT Y   + D  P  TNQFSVT Y   +++ +
Sbjct:   247 KTH-PLDGLRVDVAETKSEMFNYYLKIVPTLYMRGNSDGEPIYTNQFSVTRYRKDLSDRE 305

Query:   126 RTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 185
             R  P ++F Y+LSP+ V   E   SF H  T  C+++GG F + G+L   +    EA+ +
Sbjct:   306 RGMPGIFFSYELSPLMVKYAERHSSFGHFATNCCSIIGGVFTVAGILAVLLNNSWEAIQR 365

GO:0030134 "ER to Golgi transport vesicle" evidence=ISS

WB|WBGene00010725 erv-46 [Caenorhabditis elegans (taxid:6239)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 64/180 (35%), Positives = 99/180 (55%)

Query:     3 KKVKHALE-SGEGCRVYGVLDVQRVAGNFHISV---H-GLNIYVAQMIFGGAKNVNVSHV 57
             K VK   E   EGCRVYG + V +VAGNFH++    H  +  +V  +        + SH 
Sbjct:   185 KWVKEFNEHKNEGCRVYGTVKVAKVAGNFHLAPGDPHQAMRSHVHDLHNLDPVKFDASHT 244

Query:    58 IHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEY 117
             ++ +SFG  +PG + PLDG V   +     ++YY+K+VPT Y Y+   V  ++QFSVT +
Sbjct:   245 VNHVSFGKSFPGKNYPLDGKVNTDNRGGIMYQYYVKVVPTRYDYLDGRVDQSHQFSVTTH 304

Query:   118 FSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMY 177
                +       P  +  Y+ SP+ V  +E R+SF   +  LCA++GG FA+  ++D  +Y
Sbjct:   305 KKDLGFRQSGLPGFFLQYEFSPLMVQYEEFRQSFASFLVSLCAIVGGVFAMAQLVDITIY 364

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	193
pfam07970	222	pfam07970, COPIIcoated_ERV, Endoplasmic reticulum	4e-58

>gnl|CDD|219673 pfam07970, COPIIcoated_ERV, Endoplasmic reticulum vesicle transporter

 Score =  181 bits (461), Expect = 4e-58
 Identities = 72/180 (40%), Positives = 103/180 (57%), Gaps = 10/180 (5%)

Query: 3   KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIF-----GGAKNVNVSHV 57
           +K+K    S EGCRV G L+V RVAGNFHI+  G +                + +N SH 
Sbjct: 44  EKLKAQKNSNEGCRVKGTLEVNRVAGNFHIA-PGRSFQEKGGHVHDLSLFTDEKLNFSHT 102

Query: 58  IHDLSFGPKYP-GIHNPLDGT--VRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSV 114
           I+ LSFG ++P G+ NPLDGT            + Y++K+VPT Y  ++  ++ TNQ+SV
Sbjct: 103 INHLSFGEEFPGGVTNPLDGTTKFVQTDKGYHMYSYFLKVVPTRYESLNGLIVETNQYSV 162

Query: 115 TEYFSTINE-FDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLD 173
           T +   +        P V+F YD SPI V   E+R+SF H +T LCA++GG FA+ G++D
Sbjct: 163 TSHDRPVTGGSRGGVPGVFFNYDFSPIKVINTEDRQSFSHFLTNLCAIIGGVFAVAGLID 222

This family is conserved from plants and fungi to humans. Erv46 works in close conjunction with Erv41 and together they form a complex which cycles between the endoplasmic reticulum and Golgi complex. Erv46-41 interacts strongly with the endoplasmic reticulum glucosidase II. Mammalian glucosidase II comprises a catalytic alpha-subunit and a 58 kDa beta subunit, which is required for ER localisation. All proteins identified biochemically as Erv41p-Erv46p interactors are localised to the early secretory pathway and are involved in protein maturation and processing in the ER and/or sorting into COPII vesicles for transport to the Golgi. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	193
KOG2667	379	consensus COPII vesicle protein [Intracellular tra	100.0
PF07970	222	COPIIcoated_ERV: Endoplasmic reticulum vesicle tra	100.0

>KOG2667 consensus COPII vesicle protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=5.3e-60  Score=417.97  Aligned_cols=183  Identities=45%  Similarity=0.800  Sum_probs=161.9

Q ss_pred             hccCCCcceEEEEEEEeeeeeEEEEEEcCCc----ceeeeehhCCCccccccEEEEEeEecCCCCCCCCCCCCeeEeecC
Q 029475            8 ALESGEGCRVYGVLDVQRVAGNFHISVHGLN----IYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHD   83 (193)
Q Consensus         8 ~~~~~egCri~G~~~VnkV~GnfhI~~~~~~----~~~~~~~~~~~~~~N~SH~I~~lsFG~~~~~~~~PLdg~~~~~~~   83 (193)
                      +.+.+|||||+|++.||||||||||++.+..    .+.++..  ..+++|+||+|||||||+.+|++.|||||+..++.+
T Consensus       190 ~~~~geGCRi~G~l~VNKVaGnfHia~g~~~~~~~~h~hd~~--~~~~~n~SH~InhLSFG~~~p~~~nPLdG~~~~~~~  267 (379)
T KOG2667|consen  190 AEQKGEGCRIYGQLEVNKVAGNFHIAPGKSSQHSNAHVHDLS--LLDNLNFSHRINHLSFGEYIPGIVNPLDGTNFIANE  267 (379)
T ss_pred             CCCCCCceEEEEEEEEeeecceEEEccCCCccccccccchhh--hcccCCceEEEeeeccCCCCcccccCCCCccccccC
Confidence            4456899999999999999999999974211    1111111  014699999999999999999999999999888888


Q ss_pred             CceeeEEEEEEEEEEEEeecCceeeeeeeEEEEEEEeecC-CCC-CcceEEEEEEccceEEEEEeeeccHHHHHHhHhhh
Q 029475           84 TSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINE-FDR-TWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAV  161 (193)
Q Consensus        84 ~~~~~~YflkvVPT~y~~~~~~~~~t~QySvt~~~~~~~~-~~~-~~PgI~F~Yd~SPi~v~~~e~~~s~~~flt~lcaI  161 (193)
                      ...+|+||+|||||.|.+.++.++.|||||||++.+.... .++ ++|||||+||+|||+|+++|+|.||+|||||||||
T Consensus       268 ~~~~~~Yf~KvVPT~y~~~~~~~~~T~QysVt~~~~~~~~~~~~~~~PGifF~YelSPl~V~v~E~r~sf~~Flt~lCAI  347 (379)
T KOG2667|consen  268 HLTTFQYFLKVVPTVYKYKSGRVIDTNQYSVTEYEYVLHSHRAKSGIPGIFFKYELSPLMVKVTEERQSFSHFLTRLCAI  347 (379)
T ss_pred             CccceeeEEEEcceEEEeecCceecceeeeeeeeEEeccccccccCCCeEEEEEecCceEEEEEeccccHHHHHHHHHHH
Confidence            8899999999999999999999999999999999988763 333 89999999999999999999999999999999999


Q ss_pred             ccceeeehhhhHHHHHHHHHHHcCCCccCCC
Q 029475          162 LGGTFALTGMLDRWMYRLLEALTKPSARSVL  192 (193)
Q Consensus       162 iGGvftv~g~iD~~~~~~~~~~~k~~~~~~~  192 (193)
                      |||+|||||+||++++.+.++++++.+.+|+
T Consensus       348 iGGvftvagiid~~~~~~~~~i~~k~~~gk~  378 (379)
T KOG2667|consen  348 IGGVFTVAGILDSLLYHILELIKGKIALGKY  378 (379)
T ss_pred             hcceeehHHHHHHHHHHHHHHHhcchhhhcc
Confidence            9999999999999999999999988888876

>PF07970 COPIIcoated_ERV: Endoplasmic reticulum vesicle transporter ; InterPro: IPR012936 This domain occurs in many hypothetical proteins, and also two partially characterised proteins

Probab=100.00  E-value=4.2e-58  Score=384.04  Aligned_cols=171  Identities=43%  Similarity=0.812  Sum_probs=148.3

Q ss_pred             hhhhhhccCCCcceEEEEEEEeeeeeEEEEEEcCCcc----eeeee-hhCCCccccccEEEEEeEecCCCCCCCCCCCCe
Q 029475            3 KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNI----YVAQM-IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGT   77 (193)
Q Consensus         3 ~~~~~~~~~~egCri~G~~~VnkV~GnfhI~~~~~~~----~~~~~-~~~~~~~~N~SH~I~~lsFG~~~~~~~~PLdg~   77 (193)
                      ++++.+.+.+|||||+|++.||||||||||+++....    +.++. .+.....+|+||+|||||||+++|+..|||||+
T Consensus        44 ~~~~~~~~~~egCri~G~l~VnkV~Gnfhi~~g~~~~~~~~h~hd~~~~~~~~~~N~SH~I~~lsFG~~~~~~~~PLdg~  123 (222)
T PF07970_consen   44 KKIKEQVNEGEGCRIYGSLEVNKVPGNFHIAPGRSFQQDGGHIHDLSPFDDEPKFNFSHTINHLSFGEEIPGIVNPLDGT  123 (222)
T ss_pred             hhhhhhccCCCCCEEEEEEEEEEEEEEEEEEecchhccCCcceeehhhhccccCCCCCeEEEEEEeccccccccccccCc
Confidence            4566777778999999999999999999999865321    11111 122111799999999999999999999999999


Q ss_pred             eEe--ecCCceeeEEEEEEEEEEEEeecCceeeeeeeEEEEEEEeecCCC-CCcceEEEEEEccceEEEEEeeeccHHHH
Q 029475           78 VRM--LHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFD-RTWPAVYFLYDLSPITVTIKEERRSFLHL  154 (193)
Q Consensus        78 ~~~--~~~~~~~~~YflkvVPT~y~~~~~~~~~t~QySvt~~~~~~~~~~-~~~PgI~F~Yd~SPi~v~~~e~~~s~~~f  154 (193)
                      .++  .+....+|+||||||||+|...++..++|||||+|++.+.+.... .++|||||+||||||+|+++++|+||+||
T Consensus       124 ~~~~~~~~~~~~~~YflkvVPT~y~~~~~~~~~t~qYsvt~~~~~~~~~~~~~~PGI~F~Yd~SPi~v~~~~~r~s~~~f  203 (222)
T PF07970_consen  124 QKIVQTDNGNYMYQYFLKVVPTTYEDLDGFSIETYQYSVTEHSRPLNGGSSGGLPGIFFKYDFSPIMVVITEDRKSFLHF  203 (222)
T ss_pred             cccccCCCCceeEEEEEEEeeeeeEeccccccccccccceeeeeeccCCCCCCCceEEEEEeceeEEEEEEEecCCHHHH
Confidence            883  466788999999999999999988767999999999999987654 78999999999999999999999999999


Q ss_pred             HHhHhhhccceeeehhhhH
Q 029475          155 ITRLCAVLGGTFALTGMLD  173 (193)
Q Consensus       155 lt~lcaIiGGvftv~g~iD  173 (193)
                      ||+||||||||||++||||
T Consensus       204 lt~lcaIiGGvftv~gliD  222 (222)
T PF07970_consen  204 LTRLCAIIGGVFTVAGLID  222 (222)
T ss_pred             HHHHHHHhchHheEEEecC
Confidence            9999999999999999998

One of these proteins, PTX1 Q96RQ1 from SWISSPROT, is a homeodomain-containing transcription factor involved in regulating all pituitary hormone genes []. This protein is down regulated in prostate carcinoma []. The other protein, ERGIC-32 Q969X5 from SWISSPROT, is involved in protein transport from the ER to the Golgi [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00