Citrus Sinensis ID: 029587

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-
Protein Sequence
MAASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD
Secondary Structure (PSIPRED)
ccEEccccccccccEEEEEEEEEEcEEEcccEEEEcccccEEEEEEEccccccccccccccEEEEEcccccEEEEEEccccccEEEEEcccccccEEEEEEEEccccccccEEEEEEEcccccccccEEEEEEEccccEEEEEEccEEEEEEEEEEEEccEEEEEcEEEEEEEcccccHHHHHEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccEEcccHcccccccEEEEEEEEEEEEccccEEEEEccccEEEEEccccccccccEccccccEEEEcccccEEEEEEccccccEEEEEcccccccccEEEEEEcccEEcccEEEEEEEccccccccccEEEEEccccccEEEEEcccEEEEEEEEEcccEEEEcccEEEEEEccccccHHHHHHHHHHccc
Coil and Loop (DISEMBL)
maasgpiytanspipvdlfvskkypgltrgdigfadssgdVIYRVNrtqhqsksnssqrrKRVVVVDSAGNPLISVYRQdkglwqgfkgddgeeKELIFKVNRTMKTLTRTEFEVFIvdensedsashftikgspfqksctiyrgnsIIAQTSLMYKLQQIYVRRnkfrltifptsiePAVIVALVVIFLD
Flexible Loop (DISEMBL)
maasgpiytanspipvDLFVSKKYPGLTRGDIGFADSSGDVIYRVNrtqhqsksnssqrrkrvvvvdsagnplisvyrqdkglwqgfkgddgeekelifkvnrtmktltrTEFEVFIVDensedsashftikgspfqkscTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLtifptsiepavIVALVVIFLD
Low Complexity Region (SEG)
MAASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHqsksnssqrrkrvvvvDSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD
Disordered region (IsUnstruct)
*******YTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRV*****************VVVVDSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDE******SHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFL*
Disordered Region (DISOPRED)
*AASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD
Disordered Region (DISEMBL)
MAASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNR****************VVVDSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD
Disordered Region (DISPRO)
MAASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	191	2.2.26 [Sep-21-2011]
Q8GWL2	182	Protein LURP-one-related	yes	no	0.853	0.895	0.502	1e-39
Q9LZX1	217	Protein LURP-one-related	no	no	0.916	0.806	0.272	6e-18
Q9SF24	194	Protein LURP-one-related	no	no	0.942	0.927	0.263	1e-14
Q9LQ36	224	Protein LURP-one-related	no	no	0.879	0.75	0.247	7e-11
Q9ZQR8	207	Protein LURP1 OS=Arabidop	no	no	0.895	0.826	0.254	2e-10
Q9LSQ1	185	Protein LURP-one-related	no	no	0.769	0.794	0.282	9e-10
Q9LYM3	204	Protein LURP-one-related	no	no	0.890	0.833	0.221	6e-05

>sp|Q8GWL2|LOR7_ARATH Protein LURP-one-related 7 OS=Arabidopsis thaliana GN=At2g30270 PE=2 SV=1

 Score =  162 bits (411), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/177 (50%), Positives = 117/177 (66%), Gaps = 14/177 (7%)

Query: 14  IPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPL 73
           IPVDLF SKK PGL+ GD+GFADSS  +++ + ++    KS              +G PL
Sbjct: 18  IPVDLFASKKLPGLSSGDLGFADSSEHLVFILRKSSSSLKSLLDS----------SGVPL 67

Query: 74  ISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKG 133
            S+ R   G+W+  KGD  + K+L+  V RT K  ++TE EV    E+SE+      IKG
Sbjct: 68  FSISRLHNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGESSEN----LVIKG 123

Query: 134 SPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFL 190
            PFQKSCTIY  +SI+AQTSLMYKL+QIYV R+KFRLTIFP SI+ +++VA+V IFL
Sbjct: 124 VPFQKSCTIYSQDSIVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIFL 180

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1

 Score = 90.5 bits (223), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 106/191 (55%), Gaps = 16/191 (8%)

Query: 6   PIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVV 65
           P Y A  P P+D+ + +K   LT G+    D +G+++++V       K        + V+
Sbjct: 30  PKYCA--PYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKV-------KEPVFGLHDKRVL 80

Query: 66  VDSAGNPLISVYRQDKGL---WQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENS 122
           +D +G P++++  +   +   WQ F+G   ++++L++ V R+     +T+ +VF+   N 
Sbjct: 81  LDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFL-GHNK 139

Query: 123 EDSASHFTIKGSPFQKSCTIYRGNS--IIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPA 180
           ++    F +KGS  ++SC +Y G S  I+AQ    + +Q +++ ++ F +T++P +++ A
Sbjct: 140 DEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYP-NVDYA 198

Query: 181 VIVALVVIFLD 191
            I +LVVI  D
Sbjct: 199 FIASLVVILDD 209

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740 PE=2 SV=2

 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 104/197 (52%), Gaps = 17/197 (8%)

Query: 1   MAASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRR 60
           MA   P + A  P P++L + +K   LT G+    D +G+++++V        S S +R 
Sbjct: 1   MAIVSPNFCA--PYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLF---SISDKR- 54

Query: 61  KRVVVVDSAGNPLISVYRQDKGL---WQGFKGDDGEEKELIFKVNRT-MKTLTRTEFEVF 116
              +++D+   P++++      L   W  ++G   ++ +L++ + R+ M  + + + ++F
Sbjct: 55  ---ILLDAYDTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIF 111

Query: 117 IVDENSEDSASHFTIKGSPFQKSCTIYRGNS--IIAQTSLMYKLQQIYVRRNKFRLTIFP 174
           +   N E     F +KGS   +SC +Y G S  I+AQ    +  Q I + ++ F +T++P
Sbjct: 112 LA-HNKEMKICDFHVKGSWIDRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYP 170

Query: 175 TSIEPAVIVALVVIFLD 191
            +++ A IV+L+VI  D
Sbjct: 171 -NVDFAFIVSLIVILDD 186

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840 PE=2 SV=2

 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 94/182 (51%), Gaps = 14/182 (7%)

Query: 15  PVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPLI 74
           PVDL + +K   +T G+    ++ G+++++V       K       ++ +++D  G  ++
Sbjct: 37  PVDLAIVRKVLKITDGNFVITNAEGNLLFKV-------KDPFFSLHEKRILMDGFGTKVL 89

Query: 75  SVYRQDKGL---WQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTI 131
           ++  +   +   W  F+G   EE +L++ V R+      T+ +VF+ D N E     + +
Sbjct: 90  TLKGKIMTMHDRWLVFRGGSTEEVDLLYTVKRSNMVQITTKLDVFLAD-NIEQKKCDYRL 148

Query: 132 KGSPFQKSCTIYRGNS--IIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIF 189
           +G   + SC +Y G+S  I+AQ      +Q +   ++ F LT+ P +++ A I +L+VI 
Sbjct: 149 EGVWLETSCFVYAGDSDIILAQMREKKTMQSVLFGKDNFCLTVNP-NVDYAFIASLIVIL 207

Query: 190 LD 191
           ++
Sbjct: 208 VE 209

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQR8|LURP1_ARATH Protein LURP1 OS=Arabidopsis thaliana GN=LURP1 PE=2 SV=1

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 14/185 (7%)

Query: 12  SPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGN 71
           SP PV L + +K   +T G+     + G ++++V           S   KR+++ D +G 
Sbjct: 14  SPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLF------SLHGKRILL-DCSGA 66

Query: 72  PLISVYRQDKGL---WQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASH 128
            ++++  +   +   WQ F+G   EE  L++ V R+       + EVF+ + N E+    
Sbjct: 67  KVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRSSMIQLAPKLEVFLAN-NVEEKICD 125

Query: 129 FTIKGSPFQKSCTIYRGNS--IIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALV 186
           F +KG+    SC +Y G+S  IIA       ++  +  ++ F +T+   +++ A I +L+
Sbjct: 126 FKVKGAWLDDSCVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTV-DKNVDYAFIASLI 184

Query: 187 VIFLD 191
           VI ++
Sbjct: 185 VILVE 189

Involved in basal defense against virulent oomycetes. Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSQ1|LOR13_ARATH Protein LURP-one-related 13 OS=Arabidopsis thaliana GN=At3g16900 PE=3 SV=1

 Score = 63.2 bits (152), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 37/184 (20%)

Query: 13  PIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNP 72
           P P+DL ++        GD    D++G+ +++V       K+       + ++VD   +P
Sbjct: 23  PQPLDLTIT--------GDT-VKDATGNKVFKV-------KTPLFGLHNKRILVDPNDSP 66

Query: 73  LISVY-----RQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSAS 127
           ++++      + D+  WQ ++G D ++K  IF V R+     +T  EVF+    + +S+ 
Sbjct: 67  IVTMKMKVTSKHDR--WQVYRGSDLDDK--IFTVKRSSTVQLKTRVEVFLKHNQTRESSC 122

Query: 128 HFTIKGSPFQKSCTIYRGNS--IIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVAL 185
            FTIKG   +++CTIY  +S  IIA         Q+Y    +   TI+P +++ A IV L
Sbjct: 123 DFTIKGRFMKRACTIYVADSTKIIA---------QVYEGHERLVATIYP-NVDYAFIVTL 172

Query: 186 VVIF 189
           + IF
Sbjct: 173 IFIF 176

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYM3|LOR14_ARATH Protein LURP-one-related 14 OS=Arabidopsis thaliana GN=At3g56180 PE=2 SV=2

 Score = 47.4 bits (111), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 15/185 (8%)

Query: 12  SPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGN 71
           +P P+DL V +K    ++      D SG+++ +++             RKRV+  D AG 
Sbjct: 25  NPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAW------GFNRKRVMR-DPAGF 77

Query: 72  PLISVYRQDKGL---WQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENS--EDSA 126
            ++S+ ++   L   W+   G+  E ++L+F V ++     +T  +VF+ + N+  + + 
Sbjct: 78  TILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTSVDVFLPENNNVKKTNT 137

Query: 127 SHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALV 186
             F   G     S  +++ +++IA     +        +  F++ + P  ++ A I+AL+
Sbjct: 138 CDFHASGGYSNISFKVFKADALIAGVGFTWG--SFCKGKYNFKVRVNP-EVDYAFIIALL 194

Query: 187 VIFLD 191
           V+  D
Sbjct: 195 VMVDD 199

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
224145491	172	predicted protein [Populus trichocarpa]	0.890	0.988	0.610	4e-55
297745801	419	unnamed protein product [Vitis vinifera]	0.942	0.429	0.560	3e-52
225434402	186	PREDICTED: protein LURP-one-related 7-li	0.942	0.967	0.560	7e-52
449444136	185	PREDICTED: protein LURP-one-related 7-li	0.879	0.908	0.558	2e-49
449493016	185	PREDICTED: protein LURP-one-related 7-li	0.879	0.908	0.558	3e-49
356553130	197	PREDICTED: protein LURP-one-related 7-li	0.947	0.918	0.5	7e-48
355430070	195	hypothetical protein [Linum usitatissimu	0.942	0.923	0.540	1e-47
356500912	197	PREDICTED: protein LURP-one-related 7-li	0.947	0.918	0.494	6e-47
357491351	196	hypothetical protein MTR_5g074550 [Medic	0.952	0.928	0.461	1e-42
30684527	182	protein LURP-one-related 7 [Arabidopsis	0.853	0.895	0.502	5e-38

>gi|224145491|ref|XP_002325662.1| predicted protein [Populus trichocarpa] gi|222862537|gb|EEF00044.1| predicted protein [Populus trichocarpa]

 Score =  219 bits (558), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 108/177 (61%), Positives = 139/177 (78%), Gaps = 7/177 (3%)

Query: 14  IPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPL 73
           IPVDLFVSKK+PGL  GD+GFADS G+++++VN       S SS +R   V++D++GNPL
Sbjct: 1   IPVDLFVSKKHPGLN-GDLGFADSLGNIVFKVN---FDKSSKSSFKR---VLLDASGNPL 53

Query: 74  ISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKG 133
           I+V+R  KG WQGFKG D  EK+LIF+V RT+K LTRTE EVF+V E S +S   F +KG
Sbjct: 54  ITVFRDGKGSWQGFKGGDNREKDLIFRVKRTVKKLTRTELEVFLVGEISRESTPDFKVKG 113

Query: 134 SPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFL 190
            PFQ+SCTIYR +SI+AQTSLMYKL QIY RR+K+RLTIFP S++ ++I +L+VIFL
Sbjct: 114 FPFQRSCTIYRSDSIVAQTSLMYKLHQIYARRSKYRLTIFPGSVDHSLIASLIVIFL 170

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745801|emb|CBI15857.3| unnamed protein product [Vitis vinifera]

 Score =  209 bits (533), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 107/191 (56%), Positives = 138/191 (72%), Gaps = 11/191 (5%)

Query: 1   MAASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRR 60
           MA+S   Y ++  IP DLF+SKK+PGL RG +G ADSSG ++YRVNR         S + 
Sbjct: 234 MASSALAYPSDFQIPFDLFISKKHPGLPRGYLGLADSSGTIVYRVNR--------RSPKH 285

Query: 61  KRVVVVDSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDE 120
            RV++ D+AGNPLIS+     G WQ F+GD G  ++LIF+V RT+ TLTRTEF +F+   
Sbjct: 286 NRVLL-DAAGNPLISMRGSHDGSWQCFRGD-GSGEDLIFRVERTLNTLTRTEFNIFLGGA 343

Query: 121 NSEDSASHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPA 180
           N EDS + F +KG PFQ+SCTIY+GNSI+AQTSLMYKL + +V R KFRLTIFP S + A
Sbjct: 344 NCEDS-TDFKMKGCPFQRSCTIYKGNSIVAQTSLMYKLGKAFVGRCKFRLTIFPGSGDHA 402

Query: 181 VIVALVVIFLD 191
           V++AL+VIF D
Sbjct: 403 VVMALIVIFFD 413

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434402|ref|XP_002277024.1| PREDICTED: protein LURP-one-related 7-like [Vitis vinifera]

 Score =  208 bits (530), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 107/191 (56%), Positives = 138/191 (72%), Gaps = 11/191 (5%)

Query: 1   MAASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRR 60
           MA+S   Y ++  IP DLF+SKK+PGL RG +G ADSSG ++YRVNR         S + 
Sbjct: 1   MASSALAYPSDFQIPFDLFISKKHPGLPRGYLGLADSSGTIVYRVNR--------RSPKH 52

Query: 61  KRVVVVDSAGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDE 120
            RV++ D+AGNPLIS+     G WQ F+GD G  ++LIF+V RT+ TLTRTEF +F+   
Sbjct: 53  NRVLL-DAAGNPLISMRGSHDGSWQCFRGD-GSGEDLIFRVERTLNTLTRTEFNIFLGGA 110

Query: 121 NSEDSASHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPA 180
           N EDS + F +KG PFQ+SCTIY+GNSI+AQTSLMYKL + +V R KFRLTIFP S + A
Sbjct: 111 NCEDS-TDFKMKGCPFQRSCTIYKGNSIVAQTSLMYKLGKAFVGRCKFRLTIFPGSGDHA 169

Query: 181 VIVALVVIFLD 191
           V++AL+VIF D
Sbjct: 170 VVMALIVIFFD 180

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444136|ref|XP_004139831.1| PREDICTED: protein LURP-one-related 7-like [Cucumis sativus]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/179 (55%), Positives = 135/179 (75%), Gaps = 11/179 (6%)

Query: 13  PIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNP 72
           PIP+DLF+SK++P          +SSGD+IYR+NR  H  KS+S    K ++    A +P
Sbjct: 15  PIPIDLFLSKQHPDY------LTNSSGDIIYRINR--HALKSSSVD--KILLPHADAADP 64

Query: 73  LISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIK 132
           LIS++R +K  W+GFKGD GEE  L+FKV RT+  L RTEF+VF+V  N +DS + F +K
Sbjct: 65  LISIFRVNKESWEGFKGDVGEE-NLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMK 123

Query: 133 GSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD 191
           G PFQ+SCT+Y GN+I+AQTSLM+KL+QI+VRR +FRLTIFP+S++PA+IVAL+VIF D
Sbjct: 124 GWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFD 182

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449493016|ref|XP_004159168.1| PREDICTED: protein LURP-one-related 7-like [Cucumis sativus]

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 100/179 (55%), Positives = 135/179 (75%), Gaps = 11/179 (6%)

Query: 13  PIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNP 72
           PIP+DLF+SK++P          +SSGD+IYR+NR  H  KS+S    K ++    A +P
Sbjct: 15  PIPIDLFLSKQHPDY------LTNSSGDIIYRINR--HALKSSSVD--KILLPHADAADP 64

Query: 73  LISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIK 132
           LIS++R +K  W+GFKGD GEE  L+FKV RT+  L RTEF+VF+V  N +DS + F +K
Sbjct: 65  LISIFRVNKESWEGFKGDVGEE-NLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMK 123

Query: 133 GSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD 191
           G PFQ+SCT+Y GN+I+AQTSLM+KL+QI+VRR +FRLTIFP+S++PA+IVAL+VIF D
Sbjct: 124 GWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFD 182

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553130|ref|XP_003544911.1| PREDICTED: protein LURP-one-related 7-like [Glycine max]

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 127/182 (69%), Gaps = 1/182 (0%)

Query: 9   TANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDS 68
           + N  IP+DLF SKK+ G++RG + F D SG++++RVNR      S+   + K++++ D+
Sbjct: 13  SGNWEIPIDLFGSKKHAGVSRGVLAFTDESGNIVFRVNRHPPNPNSSPLPKDKKLLL-DA 71

Query: 69  AGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASH 128
           +GN L S+YR   G W+ +KG+  E KEL+F V RT+KTLTR E EV    E S D    
Sbjct: 72  SGNTLFSIYRYHNGSWKCYKGNSDENKELVFSVQRTLKTLTRVELEVLFAAERSNDEGCD 131

Query: 129 FTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVI 188
             +KGSPFQ+SC IY+   ++AQ+SLMYKL Q++V R+KFRLTIFP +I+ A+IVAL VI
Sbjct: 132 LKVKGSPFQRSCCIYKDADLVAQSSLMYKLHQMFVSRSKFRLTIFPGTIDHALIVALFVI 191

Query: 189 FL 190
           FL
Sbjct: 192 FL 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|355430070|gb|AER92596.1| hypothetical protein [Linum usitatissimum]

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 99/183 (54%), Positives = 141/183 (77%), Gaps = 3/183 (1%)

Query: 9   TANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDS 68
            A S IPVDLFVSK +PG+ +G++GFADSSG++++RV          S Q +K  ++++S
Sbjct: 14  AAASQIPVDLFVSKNHPGVPQGNLGFADSSGELLFRVAPLPSPKAWKSRQSKK--LILNS 71

Query: 69  AGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSAS- 127
           +G+PLIS++R DKG W+GF+G +  EKE++F+V RT+  L RTEFEVF+  E+S+D +S 
Sbjct: 72  SGSPLISLHRLDKGSWEGFEGGEDTEKEMLFRVQRTVNKLCRTEFEVFLAGESSQDQSSP 131

Query: 128 HFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVV 187
            F +KG  FQ+SCTIY G+SI+AQTSLMYKL +++  R+KFRLT+FP SI+ A++VALVV
Sbjct: 132 DFKVKGCCFQRSCTIYGGDSIVAQTSLMYKLHEVHASRSKFRLTVFPGSIDHALVVALVV 191

Query: 188 IFL 190
           +FL
Sbjct: 192 VFL 194

Source: Linum usitatissimum

Species: Linum usitatissimum

Genus: Linum

Family: Linaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500912|ref|XP_003519274.1| PREDICTED: protein LURP-one-related 7-like [Glycine max]

 Score =  192 bits (487), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 90/182 (49%), Positives = 125/182 (68%), Gaps = 1/182 (0%)

Query: 9   TANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDS 68
           + N  IP+DLF SKK+ G++RG + F D SG++++RVNR      S    + K++++ D+
Sbjct: 13  SGNWEIPIDLFGSKKHAGVSRGVLAFTDESGNIVFRVNRHPPNPNSLPLPKDKKLLL-DA 71

Query: 69  AGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASH 128
           +GN L S+YR   G W+ +KG+  E KEL+F V RT+KT+TR E EV    E S D    
Sbjct: 72  SGNTLFSIYRYHNGSWKCYKGNSEENKELVFSVQRTLKTITRVELEVLFEAERSNDECCD 131

Query: 129 FTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVI 188
             +KGSPF++SC IY+   ++AQ+SLMYKL QI+V R KFRLTIFP +I+ A+IVAL VI
Sbjct: 132 LKVKGSPFKRSCCIYKHVDLVAQSSLMYKLHQIHVSRGKFRLTIFPGTIDHALIVALFVI 191

Query: 189 FL 190
           FL
Sbjct: 192 FL 193

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357491351|ref|XP_003615963.1| hypothetical protein MTR_5g074550 [Medicago truncatula] gi|355517298|gb|AES98921.1| hypothetical protein MTR_5g074550 [Medicago truncatula]

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 85/184 (46%), Positives = 127/184 (69%), Gaps = 2/184 (1%)

Query: 9   TANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDS 68
           T +  IP+DLF SKK+ G+ RG + F D+SG+++++V+R      S+SS +  ++++ DS
Sbjct: 11  TEDQHIPIDLFGSKKHAGVPRGILAFTDASGNIVFKVHRQPPDPNSSSSLKDTKLLL-DS 69

Query: 69  AGNPLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDS-AS 127
             NPL S++R   G+W+ +KG   E KEL+ +V RT+KT+T+ E EVF   E  +D+   
Sbjct: 70  NDNPLFSIHRHHNGIWKCYKGSGDENKELVLQVKRTVKTITKVELEVFFAGERLKDNDTC 129

Query: 128 HFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVV 187
              + GSPF++SC++Y+   ++AQ+SLMYKL QIYV R KFRLTIFP  I+  +IVAL V
Sbjct: 130 DLKVIGSPFKRSCSVYKDGDLVAQSSLMYKLNQIYVSRGKFRLTIFPGIIDRGLIVALFV 189

Query: 188 IFLD 191
           IFL+
Sbjct: 190 IFLN 193

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30684527|ref|NP_180586.2| protein LURP-one-related 7 [Arabidopsis thaliana] gi|75150998|sp|Q8GWL2.1|LOR7_ARATH RecName: Full=Protein LURP-one-related 7 gi|26452565|dbj|BAC43367.1| unknown protein [Arabidopsis thaliana] gi|28973165|gb|AAO63907.1| unknown protein [Arabidopsis thaliana] gi|330253270|gb|AEC08364.1| protein LURP-one-related 7 [Arabidopsis thaliana]

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 89/177 (50%), Positives = 117/177 (66%), Gaps = 14/177 (7%)

Query: 14  IPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPL 73
           IPVDLF SKK PGL+ GD+GFADSS  +++ + ++    KS              +G PL
Sbjct: 18  IPVDLFASKKLPGLSSGDLGFADSSEHLVFILRKSSSSLKSLLDS----------SGVPL 67

Query: 74  ISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKG 133
            S+ R   G+W+  KGD  + K+L+  V RT K  ++TE EV    E+SE+      IKG
Sbjct: 68  FSISRLHNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGESSEN----LVIKG 123

Query: 134 SPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFL 190
            PFQKSCTIY  +SI+AQTSLMYKL+QIYV R+KFRLTIFP SI+ +++VA+V IFL
Sbjct: 124 VPFQKSCTIYSQDSIVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIFL 180

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	191
TAIR|locus:2065753	182	AT2G30270 "AT2G30270" [Arabido	0.853	0.895	0.502	2.6e-38
TAIR|locus:2181082	217	AT5G01750 "AT5G01750" [Arabido	0.916	0.806	0.261	5.8e-18
TAIR|locus:2081481	194	AT3G11740 "AT3G11740" [Arabido	0.942	0.927	0.248	1.8e-14
TAIR|locus:2055250	207	LURP1 "AT2G14560" [Arabidopsis	0.910	0.840	0.236	9.4e-11
TAIR|locus:2086062	185	AT3G16900 "AT3G16900" [Arabido	0.502	0.518	0.339	3.2e-10
TAIR|locus:2093242	220	AT3G15810 "AT3G15810" [Arabido	0.780	0.677	0.295	8.6e-06
TAIR|locus:2078506	204	AT3G56180 "AT3G56180" [Arabido	0.879	0.823	0.219	6.6e-05

TAIR|locus:2065753 AT2G30270 "AT2G30270" [Arabidopsis thaliana (taxid:3702)]

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 89/177 (50%), Positives = 117/177 (66%)

Query:    14 IPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHXXXXXXXXXXXXXXXXDSAGNPL 73
             IPVDLF SKK PGL+ GD+GFADSS  +++ + ++                  DS+G PL
Sbjct:    18 IPVDLFASKKLPGLSSGDLGFADSSEHLVFILRKSS----------SSLKSLLDSSGVPL 67

Query:    74 ISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKG 133
              S+ R   G+W+  KGD  + K+L+  V RT K  ++TE EV    E+SE+      IKG
Sbjct:    68 FSISRLHNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAGESSEN----LVIKG 123

Query:   134 SPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFL 190
              PFQKSCTIY  +SI+AQTSLMYKL+QIYV R+KFRLTIFP SI+ +++VA+V IFL
Sbjct:   124 VPFQKSCTIYSQDSIVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIFL 180

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2181082 AT5G01750 "AT5G01750" [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 50/191 (26%), Positives = 101/191 (52%)

Query:     6 PIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHXXXXXXXXXXXXXXX 65
             P Y A  P P+D+ + +K   LT G+    D +G+++++V                    
Sbjct:    30 PKYCA--PYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEP-------VFGLHDKRVL 80

Query:    66 XDSAGNPLISVYRQDKGL---WQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENS 122
              D +G P++++  +   +   WQ F+G   ++++L++ V R+     +T+ +VF+   N 
Sbjct:    81 LDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFL-GHNK 139

Query:   123 EDSASHFTIKGSPFQKSCTIYRGNS--IIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPA 180
             ++    F +KGS  ++SC +Y G S  I+AQ    + +Q +++ ++ F +T++P +++ A
Sbjct:   140 DEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYP-NVDYA 198

Query:   181 VIVALVVIFLD 191
              I +LVVI  D
Sbjct:   199 FIASLVVILDD 209

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2081481 AT3G11740 "AT3G11740" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 49/197 (24%), Positives = 97/197 (49%)

Query:     1 MAASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHXXXXXXXXXX 60
             MA   P + A  P P++L + +K   LT G+    D +G+++++V               
Sbjct:     1 MAIVSPNFCA--PYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEP-------LFSIS 51

Query:    61 XXXXXXDSAGNPLISVYRQDKGL---WQGFKGDDGEEKELIFKVNRT-MKTLTRTEFEVF 116
                   D+   P++++      L   W  ++G   ++ +L++ + R+ M  + + + ++F
Sbjct:    52 DKRILLDAYDTPILTLRENKVSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIF 111

Query:   117 IVDENSEDSASHFTIKGSPFQKSCTIYRGNS--IIAQTSLMYKLQQIYVRRNKFRLTIFP 174
             +   N E     F +KGS   +SC +Y G S  I+AQ    +  Q I + ++ F +T++P
Sbjct:   112 LA-HNKEMKICDFHVKGSWIDRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYP 170

Query:   175 TSIEPAVIVALVVIFLD 191
              +++ A IV+L+VI  D
Sbjct:   171 -NVDFAFIVSLIVILDD 186

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2055250 LURP1 "AT2G14560" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 43/182 (23%), Positives = 85/182 (46%)

Query:    12 SPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHXXXXXXXXXXXXXXXXDSAGN 71
             SP PV L + +K   +T G+     + G ++++V                      +   
Sbjct:    14 SPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSLHGKRILLDCSGAKVLTLRG 73

Query:    72 PLISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTI 131
              +++++  D+  WQ F+G   EE  L++ V R+       + EVF+ + N E+    F +
Sbjct:    74 KMMTMH--DR--WQVFRGGSTEEGALLYTVKRSSMIQLAPKLEVFLAN-NVEEKICDFKV 128

Query:   132 KGSPFQKSCTIYRGNS--IIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIF 189
             KG+    SC +Y G+S  IIA       ++  +  ++ F +T+   +++ A I +L+VI 
Sbjct:   129 KGAWLDDSCVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTV-DKNVDYAFIASLIVIL 187

Query:   190 LD 191
             ++
Sbjct:   188 VE 189

GO:0003674 "molecular_function" evidence=ND

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

TAIR|locus:2086062 AT3G16900 "AT3G16900" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 36/106 (33%), Positives = 59/106 (55%)

Query:    84 WQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGSPFQKSCTIY 143
             WQ ++G D ++K  IF V R+     +T  EVF+    + +S+  FTIKG   +++CTIY
Sbjct:    81 WQVYRGSDLDDK--IFTVKRSSTVQLKTRVEVFLKHNQTRESSCDFTIKGRFMKRACTIY 138

Query:   144 RGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIF 189
               +S    T +   + Q+Y    +   TI+P +++ A IV L+ IF
Sbjct:   139 VADS----TKI---IAQVYEGHERLVATIYP-NVDYAFIVTLIFIF 176

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2093242 AT3G15810 "AT3G15810" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 8.6e-06, P = 8.6e-06
 Identities = 50/169 (29%), Positives = 75/169 (44%)

Query:    30 GDIGFA--DSSGDVIYRVNRTQHXXXXXXXXXXXXXXXXDSAGNPLISVYRQDKGL---W 84
             GD GFA  D  GD+I+RV+                    D+ G  L++V R+   L   W
Sbjct:    44 GD-GFAAYDCRGDIIFRVD-----SYGPDTRDNDEIVLMDATGKCLLTVKRKRPTLHQRW 97

Query:    85 QGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGSPFQKSCTIYR 144
             +GF G+  E ++ IF V R+   + R   EV + D   E+    + I G   Q+SC IY 
Sbjct:    98 EGFLGERSEGQKPIFSVRRS-SIIGRCTMEVEVYDGTGEE----YIIDGDFSQRSCLIYD 152

Query:   145 GNSI-IAQTSLMYKLQ-QIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD 191
                  +A+          + + R+ F L I P   + A  + LVV+ LD
Sbjct:   153 TKKCTVAEIKRKVDASTNVMLGRDVFTLEIKP-GFDGAFAMGLVVV-LD 199

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2078506 AT3G56180 "AT3G56180" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 41/187 (21%), Positives = 85/187 (45%)

Query:    12 SPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHXXXXXXXXXXXXXXXXDSAGN 71
             +P P+DL V +K    ++      D SG+++ +++                    D AG 
Sbjct:    25 NPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQID-------GQAWGFNRKRVMRDPAGF 77

Query:    72 PLISVYRQDKGL-----WQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENS--ED 124
              ++S+ RQ KGL     W+   G+  E ++L+F V ++     +T  +VF+ + N+  + 
Sbjct:    78 TILSM-RQ-KGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTSVDVFLPENNNVKKT 135

Query:   125 SASHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVA 184
             +   F   G     S  +++ +++IA     +        +  F++ + P  ++ A I+A
Sbjct:   136 NTCDFHASGGYSNISFKVFKADALIAGVGFTWG--SFCKGKYNFKVRVNP-EVDYAFIIA 192

Query:   185 LVVIFLD 191
             L+V+  D
Sbjct:   193 LLVMVDD 199


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      191       175   0.00078  109 3  11 22  0.40    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  576 (61 KB)
  Total size of DFA:  136 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.48u 0.09s 14.57t   Elapsed:  00:00:01
  Total cpu time:  14.48u 0.09s 14.57t   Elapsed:  00:00:01
  Start:  Sat May 11 03:36:03 2013   End:  Sat May 11 03:36:04 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8GWL2	LOR7_ARATH	No assigned EC number	0.5028	0.8534	0.8956	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XIX.2731.1 hypothetical protein (172 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	191
pfam04525	185	pfam04525, Tub_2, Tubby C 2	3e-26

>gnl|CDD|218129 pfam04525, Tub_2, Tubby C 2

 Score = 99.0 bits (247), Expect = 3e-26
 Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 17/185 (9%)

Query: 12  SPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGN 71
           SP P DL V +K            DS+G++++RV          +       V++DS+GN
Sbjct: 10  SPEPEDLTVWRKSLVFNGDGFTVYDSNGNLVFRV-------DGYAFGLSDERVLMDSSGN 62

Query: 72  PLISVYRQDKGL---WQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENS----ED 124
           PL+++ R+   L   W+ ++G+  E K+ +F V R+     +T   VF    ++    ++
Sbjct: 63  PLLTIRRKKLSLHDRWEVYRGEGTEGKDPLFTVRRSSIVQLKTSSSVFSKRNSNVIVDDE 122

Query: 125 SASHFTIKGSPFQKSCTIYRGN-SIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIV 183
               F IKGS   +SC IY  +  +IA+       + +++ ++ + +T+ P  ++ A I+
Sbjct: 123 KNCDFDIKGSFLDRSCKIYDDSDKLIAEVK-RQTSKGVFLGKDVYTVTVKP-EVDYAFIM 180

Query: 184 ALVVI 188
           ALVV+
Sbjct: 181 ALVVV 185

The structure of this family has been solved. It comprises a 12-stranded beta barrel with a central C-terminal alpha helix. This helix is thought to be a transmembrane helix. It is structurally similar to the C-terminal domain of the Tubby protein. In plants it plays a role in defense against pathogens. Length = 185

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	191
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	100.0
COG4894	159	Uncharacterized conserved protein [Function unknow	100.0
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	99.64
COG4894	159	Uncharacterized conserved protein [Function unknow	98.09
KOG0621	292	consensus Phospholipid scramblase [Cell wall/membr	97.78
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	97.58
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	96.69

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=100.00  E-value=1.8e-46  Score=301.60  Aligned_cols=177  Identities=32%  Similarity=0.586  Sum_probs=108.1

Q ss_pred             cccccccCCCCCCcEEEEEEEeeceEeCCCeEEEcCCCCEEEEEec-ccccCccCccccCceEEEEcCCCCeeEEEeccC
Q 029587            2 AASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNR-TQHQSKSNSSQRRKRVVVVDSAGNPLISVYRQD   80 (191)
Q Consensus         2 ~~v~~~~c~~~~~~~~l~vkqk~~s~~~~~f~V~D~~G~~vf~V~g-~~~~~~~~~s~~~~~~~l~D~~G~~L~ti~~k~   80 (191)
                      ++|+++||  +++|++|+||||.+++++++|+|+|++|+++|+|+| +.+      ++ ++++.|+|++|+||++|++|+
T Consensus         2 ~vv~~~~~--~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~------s~-~~~~~l~D~~G~~L~~i~~k~   72 (187)
T PF04525_consen    2 VVVDAQYC--SPQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDGGKFF------SI-GKKRTLMDASGNPLFTIRRKL   72 (187)
T ss_dssp             -SS-GGGB---SS-EEEEEE----------EEEEETTS-EEEEEE--SCT------TB-TTEEEEE-TTS-EEEEEE---
T ss_pred             cEECHHHc--CCCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEEeccc------CC-CCEEEEECCCCCEEEEEEeee
Confidence            68999999  899999999999999988999999999999999999 777      66 555699999999999999985


Q ss_pred             ---CccceeEecCCCCcceeEEEEEecccCCCcceEEEEEecCC----CCCCcceEEEEcccCCceeEEE-ECCeEEEEE
Q 029587           81 ---KGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDEN----SEDSASHFTIKGSPFQKSCTIY-RGNSIIAQT  152 (191)
Q Consensus        81 ---~~~w~~~~~~~~~~~~~~f~vkk~~~~~~k~~~~V~~~~~~----~~~~~~~~~v~G~~~~~~~~I~-~~~~~VAeV  152 (191)
                         +++|++|.+++.++++++|++||++....++++.+|+....    .+.+.++|+|+|||++++|+|+ .+|++||||
T Consensus        73 ~~l~~~w~i~~~~~~~~~~~i~tvkk~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~i~G~~~~~~~~I~~~~g~~VA~i  152 (187)
T PF04525_consen   73 FSLRPTWEIYRGGGSEGKKPIFTVKKKSMLQNKDSFDVFLPPKSNISIDDSEGPDFEIKGNFWDRSFTIYDSGGRVVAEI  152 (187)
T ss_dssp             -----EEEEEETT---GGGEEEEEE----------EEEEET--T----------SEEEES-TTTT--EEEECC--EEEEE
T ss_pred             cccceEEEEEECCCCccCceEEEEEEecccCCCcceeEEEecccceeecCCCCceEEEEEEecCcEEEEEEcCCCEEEEE
Confidence               69999999999877789999999976677899999987432    1346789999999999999999 568999999


Q ss_pred             EeeeeeeeEEEeeceEEEEEcCCCCcHHHHHHhhee
Q 029587          153 SLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVI  188 (191)
Q Consensus       153 ~rk~~~~~~~~~~dty~l~V~pg~vD~a~i~alvvI  188 (191)
                      +||+..++++.|+|+|.|+|+|| +|++|++|||||
T Consensus       153 ~rk~~~k~~~~~~dty~l~V~pg-~D~~lv~alvvi  187 (187)
T PF04525_consen  153 SRKYSSKKWFSGRDTYTLTVAPG-VDQALVVALVVI  187 (187)
T ss_dssp             EE----------B-SEEEEE-TT-SBHHHHHHHHHH
T ss_pred             ecccceeeEEecCcEEEEEEcCC-CCHHHheeEEeC
Confidence            99999889999999999999999 899999999953

; PDB: 1ZXU_A 2Q4M_A.

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.6e-34  Score=218.05  Aligned_cols=147  Identities=20%  Similarity=0.392  Sum_probs=132.7

Q ss_pred             cEEEEEEEeeceEeCCCeEEEcCCCCEEEEEecccccCccCccccCceEEEEcCCCCeeEEEeccC---CccceeEecCC
Q 029587           15 PVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPLISVYRQD---KGLWQGFKGDD   91 (191)
Q Consensus        15 ~~~l~vkqk~~s~~~~~f~V~D~~G~~vf~V~g~~~~~~~~~s~~~~~~~l~D~~G~~L~ti~~k~---~~~w~~~~~~~   91 (191)
                      +.+|.|+||+.|++ ++|.|+|++|+.+|+|+|+++      +. +.++.+.|++|.+|.+|++|+   ++++++-.|++
T Consensus         5 ~~tl~mkQk~~~~g-d~f~I~d~dgE~af~VeGs~f------~i-~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~g   76 (159)
T COG4894           5 MITLFMKQKMFSFG-DAFHIYDRDGEEAFKVEGSFF------SI-GDTLTITDASGKTLVSIEQKLLSLLPRYEISDGGG   76 (159)
T ss_pred             hHhHhhhhhhhhcc-cceEEECCCCcEEEEEeeeEE------ee-CceEEEEecCCCChHHHHHHHhhccceeEEEcCCC
Confidence            56889999999995 599999999999999999998      67 556999999999999999997   59999998886


Q ss_pred             CCcceeEEEEEecccCCCcceEEEEEecCCCCCCcceEEEEcccCCceeEEEECCeEEEEEEeeeeeeeEEEeeceEEEE
Q 029587           92 GEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLT  171 (191)
Q Consensus        92 ~~~~~~~f~vkk~~~~~~k~~~~V~~~~~~~~~~~~~~~v~G~~~~~~~~I~~~~~~VAeV~rk~~~~~~~~~~dty~l~  171 (191)
                           .++.++|+. +++|+++++.         ..+|+++||+|+.+|++.+|++++|+|++|     |++|+|||.|+
T Consensus        77 -----~~~~vrKK~-tf~Rdk~e~d---------~~~~eihGNi~d~efkl~dg~~~~aeVsKk-----wf~~rdTY~l~  136 (159)
T COG4894          77 -----TVCEVRKKV-TFSRDKFEID---------GLNWEIHGNIWDDEFKLTDGENVRAEVSKK-----WFSWRDTYHLQ  136 (159)
T ss_pred             -----CEEEEEEEE-EEEeeeEEEc---------CCCeEEecceeceEEEEecCCceehhheee-----eEeccceEEEE
Confidence                 589999885 7779988883         346999999999999999999999999975     89999999999


Q ss_pred             EcCCCCcHHHHHHhheeeeC
Q 029587          172 IFPTSIEPAVIVALVVIFLD  191 (191)
Q Consensus       172 V~pg~vD~a~i~alvvI~~D  191 (191)
                      |+|+ -|.++|+|++ +|||
T Consensus       137 vapd-e~a~lii~i~-VaLD  154 (159)
T COG4894         137 VAPD-EDALLIIAIA-VALD  154 (159)
T ss_pred             EcCc-hhhHHHHHHH-HHHH
Confidence            9999 6999999999 8876

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=99.64  E-value=3.1e-14  Score=116.78  Aligned_cols=164  Identities=16%  Similarity=0.281  Sum_probs=123.8

Q ss_pred             EEEEEEEeeceE-------eCCCeEEEcCCCCEEEEEecccccCcc--CccccCceEEEEcCCCCeeEEEeccCC-----
Q 029587           16 VDLFVSKKYPGL-------TRGDIGFADSSGDVIYRVNRTQHQSKS--NSSQRRKRVVVVDSAGNPLISVYRQDK-----   81 (191)
Q Consensus        16 ~~l~vkqk~~s~-------~~~~f~V~D~~G~~vf~V~g~~~~~~~--~~s~~~~~~~l~D~~G~~L~ti~~k~~-----   81 (191)
                      -.++|+|+.-.+       ..+.|.|+|++|+.+|.+.-..-...|  +.+.|+-++.++|+.|+++++++|...     
T Consensus        22 ~~l~I~Q~~e~~e~~~~~e~~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~Rp~~c~~C~  101 (221)
T PF03803_consen   22 DQLLIKQQIEPLEIFTGFETPNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIERPFKCCSCC  101 (221)
T ss_pred             CEEEEEEEEEEeceecccccCceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEcCCcceecc
Confidence            367788886543       348999999999999988654111111  123566678999999999999999752     


Q ss_pred             ----ccceeEecCCCCcceeEEEEEecccCCCcceEEEEEecCCCCCCcceEEEEcc------cCCceeEEEEC-CeEEE
Q 029587           82 ----GLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGS------PFQKSCTIYRG-NSIIA  150 (191)
Q Consensus        82 ----~~w~~~~~~~~~~~~~~f~vkk~~~~~~k~~~~V~~~~~~~~~~~~~~~v~G~------~~~~~~~I~~~-~~~VA  150 (191)
                          ...+++.+.+    +++.+|++++ ..++++++|.-+++     ..-+.|+|.      +.++.|.|++. |+.||
T Consensus       102 ~~~~~~~~V~~p~g----~~iG~I~q~~-~~~~~~f~I~d~~~-----~~~~~I~gp~~~~~~~~~~~F~I~~~~~~~vg  171 (221)
T PF03803_consen  102 PCCLQEMEVESPPG----NLIGSIRQPF-SCCRPNFDIFDANG-----NPIFTIKGPCCCCSCCCDWEFEIKDPNGQEVG  171 (221)
T ss_pred             cccceeEEEecCCC----cEEEEEEEcC-cccceEEEEEECCC-----ceEEEEeCCcceeccccceeeeeecccCcEEE
Confidence                3444544433    5999999985 78899999975543     456889887      46889999994 89999


Q ss_pred             EEEeeeee--eeEEEeeceEEEEEcCCCCcH---HHHHHhheeeeC
Q 029587          151 QTSLMYKL--QQIYVRRNKFRLTIFPTSIEP---AVIVALVVIFLD  191 (191)
Q Consensus       151 eV~rk~~~--~~~~~~~dty~l~V~pg~vD~---a~i~alvvI~~D  191 (191)
                      +|+|+|..  ++.+...|.|.|+..|. .|.   |+++|.+ |+||
T Consensus       172 ~I~k~w~G~~~e~~t~~d~f~i~Fp~~-l~~~~Kalll~a~-~liD  215 (221)
T PF03803_consen  172 SITKKWSGFCRELFTDADNFVIEFPPD-LDVEQKALLLGAA-FLID  215 (221)
T ss_pred             EEEEecCCcchhhccccceEEEEcCCC-CCHHHHHHHHHHH-HHhh
Confidence            99999963  35667899999999887 676   6888888 7776

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=98.09  E-value=8.7e-06  Score=62.64  Aligned_cols=99  Identities=12%  Similarity=0.204  Sum_probs=76.2

Q ss_pred             CCCcEEEEEEEeeceEeCCCeEEEcCCCCEEEEEecccccCccCccccCceEEEEcCCCCeeEEEeccC---Ccc-----
Q 029587           12 SPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPLISVYRQD---KGL-----   83 (191)
Q Consensus        12 ~~~~~~l~vkqk~~s~~~~~f~V~D~~G~~vf~V~g~~~~~~~~~s~~~~~~~l~D~~G~~L~ti~~k~---~~~-----   83 (191)
                      ...+..+.|.-+.+++.+ .|+|+|+.|.+++.++.+..      +..++ +.+.|++|+ .+.+++|.   .+.     
T Consensus        26 ~dgE~af~VeGs~f~i~d-tlti~Da~G~~l~~i~~kll------~l~~~-yeI~d~~g~-~~~vrKK~tf~Rdk~e~d~   96 (159)
T COG4894          26 RDGEEAFKVEGSFFSIGD-TLTITDASGKTLVSIEQKLL------SLLPR-YEISDGGGT-VCEVRKKVTFSRDKFEIDG   96 (159)
T ss_pred             CCCcEEEEEeeeEEeeCc-eEEEEecCCCChHHHHHHHh------hccce-eEEEcCCCC-EEEEEEEEEEEeeeEEEcC
Confidence            567789999999999965 89999999999999999987      67565 699999999 88888885   233     


Q ss_pred             --ceeEec---C---CCCcceeEEEEEecccCCCcceEEEEEecC
Q 029587           84 --WQGFKG---D---DGEEKELIFKVNRTMKTLTRTEFEVFIVDE  120 (191)
Q Consensus        84 --w~~~~~---~---~~~~~~~~f~vkk~~~~~~k~~~~V~~~~~  120 (191)
                        |+++-.   .   -.++.+..++|.|++ ...+..|.+.++++
T Consensus        97 ~~~eihGNi~d~efkl~dg~~~~aeVsKkw-f~~rdTY~l~vapd  140 (159)
T COG4894          97 LNWEIHGNIWDDEFKLTDGENVRAEVSKKW-FSWRDTYHLQVAPD  140 (159)
T ss_pred             CCeEEecceeceEEEEecCCceehhheeee-EeccceEEEEEcCc
Confidence              444320   0   023345889999986 56688899887654

>KOG0621 consensus Phospholipid scramblase [Cell wall/membrane/envelope biogenesis]

Probab=97.78  E-value=0.00036  Score=59.95  Aligned_cols=155  Identities=14%  Similarity=0.146  Sum_probs=92.8

Q ss_pred             eCCCeEEEcCCCCEEEEEec-ccccCcc--CccccCceEEEEcCCCCeeEEEeccCC--cc--ceeEec--CC-CCccee
Q 029587           28 TRGDIGFADSSGDVIYRVNR-TQHQSKS--NSSQRRKRVVVVDSAGNPLISVYRQDK--GL--WQGFKG--DD-GEEKEL   97 (191)
Q Consensus        28 ~~~~f~V~D~~G~~vf~V~g-~~~~~~~--~~s~~~~~~~l~D~~G~~L~ti~~k~~--~~--w~~~~~--~~-~~~~~~   97 (191)
                      +.+.|.|.|.+|+.+|.+-- +.. ..|  +.+.|+-...++|.-|+++++++|...  ..  +..-.-  +. .....+
T Consensus        97 t~NRY~v~~~~g~~v~~~~E~S~~-~~Rq~~g~~RpF~~~i~D~~g~eVl~~~R~~~c~~~~c~~~~~~~~~v~~p~~~~  175 (292)
T KOG0621|consen   97 TANRYVVHDMYGQPLYYAMERSNV-FARQYLGTHRPFAMRIMDNFGQEVLTCKRPFPCCSSACALCLAQEIEIQSPPMGL  175 (292)
T ss_pred             cCcEEEEEcCCcChhHHHHhhchH-HHHHhhccCCcceeEeecccCcEEEEEeccccccccccccccccEEEEEcCCCce
Confidence            35899999999999984422 210 000  113556678899999999999999862  21  111000  00 001124


Q ss_pred             EEEEEecccCCCcceEEEEEecCCCCCCcceEEEEcc-------cCCceeEEE-EC-CeEEEEEEeeeee--eeEEEeec
Q 029587           98 IFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGS-------PFQKSCTIY-RG-NSIIAQTSLMYKL--QQIYVRRN  166 (191)
Q Consensus        98 ~f~vkk~~~~~~k~~~~V~~~~~~~~~~~~~~~v~G~-------~~~~~~~I~-~~-~~~VAeV~rk~~~--~~~~~~~d  166 (191)
                      +-+|.+.. ....++++|.=.     +...-+.|+|.       +-+..+.+. .+ +++|++|.|+|..  .+.+...|
T Consensus       176 lG~v~q~~-~~~~~~f~i~~~-----~~~~v~~v~gp~~~~~~~~~d~~f~~~~~d~~~~vg~I~k~w~g~~rE~fTDad  249 (292)
T KOG0621|consen  176 LGKVLQTW-GCVNPNFHLWDR-----DGNLVFLVEGPRCCTFACCDDTVFFPKTTDNGRIVGSISRKWAGLVREAFTDAD  249 (292)
T ss_pred             EEEEEEee-ccccceEEEEcc-----cceeEEEEEcCceeEEEeecCcceeEEEcCCCeEEEEEeecccchhhhheeccc
Confidence            55555553 456777777421     12334677766       233444444 33 7899999999974  36777788


Q ss_pred             eEEEEEcCCCCcH---HHHHHhheeeeC
Q 029587          167 KFRLTIFPTSIEP---AVIVALVVIFLD  191 (191)
Q Consensus       167 ty~l~V~pg~vD~---a~i~alvvI~~D  191 (191)
                      +|.|.---. +|.   |+++|.+ .+||
T Consensus       250 ~f~v~FPld-Ldvk~kavllga~-flID  275 (292)
T KOG0621|consen  250 TFVVHFPLD-LDVKLKALLLGST-FLID  275 (292)
T ss_pred             eeeEecCCc-CCHHHHhhhhhhe-eeEE
Confidence            888876444 454   6777777 6665

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=97.58  E-value=0.00072  Score=54.13  Aligned_cols=60  Identities=20%  Similarity=0.342  Sum_probs=38.8

Q ss_pred             CCCcEEEEEEE-eeceEeCCCeEEEcCCCCEEEEEecccccCccCccccCceEEEEcCCCC----eeEEEecc
Q 029587           12 SPIPVDLFVSK-KYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGN----PLISVYRQ   79 (191)
Q Consensus        12 ~~~~~~l~vkq-k~~s~~~~~f~V~D~~G~~vf~V~g~~~~~~~~~s~~~~~~~l~D~~G~----~L~ti~~k   79 (191)
                      ......|.++. +.+++++ ...++|++|++++.+..+.+      +++ .+..+.+++++    ++++|+++
T Consensus        35 ~~G~~vf~V~g~~~~s~~~-~~~l~D~~G~~L~~i~~k~~------~l~-~~w~i~~~~~~~~~~~i~tvkk~   99 (187)
T PF04525_consen   35 ENGNVVFRVDGGKFFSIGK-KRTLMDASGNPLFTIRRKLF------SLR-PTWEIYRGGGSEGKKPIFTVKKK   99 (187)
T ss_dssp             TTS-EEEEEE--SCTTBTT-EEEEE-TTS-EEEEEE---------------EEEEEETT---GGGEEEEEE--
T ss_pred             CCCCEEEEEEEecccCCCC-EEEEECCCCCEEEEEEeeec------ccc-eEEEEEECCCCccCceEEEEEEe
Confidence            45568899999 8899965 99999999999999999877      674 45699999988    59999998

; PDB: 1ZXU_A 2Q4M_A.

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=96.69  E-value=0.0047  Score=50.45  Aligned_cols=65  Identities=11%  Similarity=0.178  Sum_probs=48.6

Q ss_pred             CCeEEEcCCCCEEEEEecccccCccCccccCceEEEEcCCCCeeEEEeccCC-------ccceeEecCCCCcceeEEEEE
Q 029587           30 GDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPLISVYRQDK-------GLWQGFKGDDGEEKELIFKVN  102 (191)
Q Consensus        30 ~~f~V~D~~G~~vf~V~g~~~~~~~~~s~~~~~~~l~D~~G~~L~ti~~k~~-------~~w~~~~~~~~~~~~~~f~vk  102 (191)
                      ...+|.+.+|+++-+|.....       .-..++.|+|++|+++++|+....       -.++++..++    +.+.+|+
T Consensus       106 ~~~~V~~p~g~~iG~I~q~~~-------~~~~~f~I~d~~~~~~~~I~gp~~~~~~~~~~~F~I~~~~~----~~vg~I~  174 (221)
T PF03803_consen  106 QEMEVESPPGNLIGSIRQPFS-------CCRPNFDIFDANGNPIFTIKGPCCCCSCCCDWEFEIKDPNG----QEVGSIT  174 (221)
T ss_pred             eeEEEecCCCcEEEEEEEcCc-------ccceEEEEEECCCceEEEEeCCcceeccccceeeeeecccC----cEEEEEE
Confidence            467788899999999998753       335668999999999999987631       3455555443    4789999


Q ss_pred             ecc
Q 029587          103 RTM  105 (191)
Q Consensus       103 k~~  105 (191)
                      |++
T Consensus       175 k~w  177 (221)
T PF03803_consen  175 KKW  177 (221)
T ss_pred             Eec
Confidence            886

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	191
1zxu_A	217	X-Ray Structure Of Protein From Arabidopsis Thalian		4e-17

>pdb|1ZXU|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g01750 Length = 217

Iteration: 1
 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 16/191 (8%)
Query: 6   PIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHXXXXXXXXXXXXXXX 65
           P Y A  P P+D  + +K   LT G+    D +G+++++V                    
Sbjct: 30  PKYCA--PYPIDXAIVRKXXSLTDGNFVITDVNGNLLFKVKEP-------VFGLHDKRVL 80
Query: 66  XDSAGNPLISVYRQD---KGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENS 122
            D +G P++++  +       WQ F+G   ++++L++ V R+     +T+ +VF+   N 
Sbjct: 81  LDGSGTPVVTLREKXVSXHDRWQVFRGGSTDQRDLLYTVKRSSXLQLKTKLDVFL-GHNK 139
Query: 123 EDSASHFTIKGSPFQKSCTIYRGNS--IIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPA 180
           ++    F +KGS  ++SC +Y G S  I+AQ    + +Q +++ ++ F +T++P +++ A
Sbjct: 140 DEKRCDFRVKGSWLERSCVVYAGESDAIVAQXHRKHTVQSVFLGKDNFSVTVYP-NVDYA 198
Query: 181 VIVALVVIFLD 191
            I +LVVI  D
Sbjct: 199 FIASLVVILDD 209
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	191
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	5e-31
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A Length = 217

 Score =  111 bits (279), Expect = 5e-31
 Identities = 50/193 (25%), Positives = 105/193 (54%), Gaps = 16/193 (8%)

Query: 2   AASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRK 61
               P Y A  P P+D+ + +K   LT G+    D +G+++++V       K        
Sbjct: 26  VVVDPKYCA--PYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKV-------KEPVFGLHD 76

Query: 62  RVVVVDSAGNPLISVYRQ---DKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIV 118
           + V++D +G P++++  +       WQ F+G   ++++L++ V R+     +T+ +VF +
Sbjct: 77  KRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVF-L 135

Query: 119 DENSEDSASHFTIKGSPFQKSCTIYRG--NSIIAQTSLMYKLQQIYVRRNKFRLTIFPTS 176
             N ++    F +KGS  ++SC +Y G  ++I+AQ    + +Q +++ ++ F +T++P +
Sbjct: 136 GHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYP-N 194

Query: 177 IEPAVIVALVVIF 189
           ++ A I +LVVI 
Sbjct: 195 VDYAFIASLVVIL 207

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 2e-05
 Identities = 33/214 (15%), Positives = 69/214 (32%), Gaps = 65/214 (30%)

Query: 31  DIGFADSSGDVIYRVNRTQHQSKSNSSQR-------RKRVVVVDSAGNPLIS--VYR--- 78
           ++   +S   V+  + +  +Q   N + R       + R+  + +    L+    Y    
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 79  ------QDKGLWQGFKGDDGEEKELI------------------FKVNRTMKTLTRTE-F 113
                 Q+   W  F   +   K L+                    ++    TLT  E  
Sbjct: 248 LVLLNVQNAKAWNAF---NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304

Query: 114 EVF--IVDENSEDSASHFTIKGSPFQKS----------CTI--YRG------NSIIAQTS 153
            +    +D   +D      +  +P + S           T   ++        +II ++S
Sbjct: 305 SLLLKYLDCRPQDL-PREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII-ESS 362

Query: 154 LMYKLQQIYVRRNKFRLTIFP--TSIEPAVIVAL 185
           L   L+    R+   RL++FP    I   ++  +
Sbjct: 363 LNV-LEPAEYRKMFDRLSVFPPSAHIPTILLSLI 395

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	191
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	100.0
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	97.7

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=100.00  E-value=4.6e-43  Score=286.53  Aligned_cols=179  Identities=26%  Similarity=0.624  Sum_probs=141.3

Q ss_pred             CcccccccCCCCCCcEEEEEEEeeceEeCCCeEEEcCCCCEEEEEecccccCccCccccCceEEEEcCCCCeeEEEeccC
Q 029587            1 MAASGPIYTANSPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNPLISVYRQD   80 (191)
Q Consensus         1 ~~~v~~~~c~~~~~~~~l~vkqk~~s~~~~~f~V~D~~G~~vf~V~g~~~~~~~~~s~~~~~~~l~D~~G~~L~ti~~k~   80 (191)
                      ||+|+|+||  +++|++|+||||+++|++++|+|+|++|+++|+|+|+.+      +. +.++.|+|++|+||++|++|.
T Consensus        25 ~~vv~~~~~--~~~~~~l~vkqk~~~~~~~~f~V~D~~G~~vf~V~~~~~------~~-~~~~~l~D~~G~~l~~i~rk~   95 (217)
T 1zxu_A           25 GVVVDPKYC--APYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVF------GL-HDKRVLLDGSGTPVVTLREKM   95 (217)
T ss_dssp             CCSSCGGGB--CSSCEEEEEECC-----CCCEEEEETTSCEEEEEECSST------TC-CSEEEEECTTSCEEEEEEC--
T ss_pred             EEEECcccc--CCCCcEEEEEEEEeEeeCCCEEEEeCCCCEEEEEEcccc------CC-CCEEEEECCCCCEEEEEEccc
Confidence            689999999  899999999999999998999999999999999999976      44 667899999999999999985


Q ss_pred             ---CccceeEecCCCCcceeEEEEEecccCCCcceEEEEEecCCCCCCcceEEEEcccCCceeEEEEC--CeEEEEEEee
Q 029587           81 ---KGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIKGSPFQKSCTIYRG--NSIIAQTSLM  155 (191)
Q Consensus        81 ---~~~w~~~~~~~~~~~~~~f~vkk~~~~~~k~~~~V~~~~~~~~~~~~~~~v~G~~~~~~~~I~~~--~~~VAeV~rk  155 (191)
                         +++|++|.+++.++++++|+|||++...++++++|+++++.. ++.++|+|+|+|++++|+|+++  |++||+|+||
T Consensus        96 ~~~~~~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~~~~~-~~~~~~~I~G~~~~~~f~I~~~~~~~~Va~I~kk  174 (217)
T 1zxu_A           96 VSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKD-EKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRK  174 (217)
T ss_dssp             ----CEEEEEETTCCCGGGEEEEEEC-------CCEEEEETTCCC--CCCSEEEESCTTTTCCEEEETTTCCEEEEEEEC
T ss_pred             cccCcEEEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEECCCCC-CCceEEEEEEeEeCCEEEEEECCCCEEEEEEEee
Confidence               689999999876555689999998422379999999886532 3457899999999999999999  7999999999


Q ss_pred             eeeeeEEEeeceEEEEEcCCCCcHHHHHHhheeeeC
Q 029587          156 YKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD  191 (191)
Q Consensus       156 ~~~~~~~~~~dty~l~V~pg~vD~a~i~alvvI~~D  191 (191)
                      ++.+++++++|+|.|+|.|+ +|.+|+||+| ++||
T Consensus       175 ~~~~~~~~~~D~y~l~V~p~-~D~aliialv-v~iD  208 (217)
T 1zxu_A          175 HTVQSVFLGKDNFSVTVYPN-VDYAFIASLV-VILD  208 (217)
T ss_dssp             --------CBCSEEEEECTT-SBHHHHHHHH-HHHH
T ss_pred             eeccccccCCcEEEEEECCC-CCHHHHHHHH-HHHH
Confidence            98888999999999999999 8999999999 6665

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=97.70  E-value=0.00021  Score=57.36  Aligned_cols=96  Identities=21%  Similarity=0.172  Sum_probs=66.5

Q ss_pred             CCCcEEEEEEEeeceEeCCCeEEEcCCCCEEEEEecccccCccCccccCceEEEEcCCCC----eeEEEecc--C--Ccc
Q 029587           12 SPIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGN----PLISVYRQ--D--KGL   83 (191)
Q Consensus        12 ~~~~~~l~vkqk~~s~~~~~f~V~D~~G~~vf~V~g~~~~~~~~~s~~~~~~~l~D~~G~----~L~ti~~k--~--~~~   83 (191)
                      ......|.+..+.+++++ .+.|+|.+|++++++..+.+      +++ .+..++++.+.    ||++|+++  .  .+.
T Consensus        59 ~~G~~vf~V~~~~~~~~~-~~~l~D~~G~~l~~i~rk~~------~~~-~~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~  130 (217)
T 1zxu_A           59 VNGNLLFKVKEPVFGLHD-KRVLLDGSGTPVVTLREKMV------SMH-DRWQVFRGGSTDQRDLLYTVKRSSMLQLKTK  130 (217)
T ss_dssp             TTSCEEEEEECSSTTCCS-EEEEECTTSCEEEEEEC-------------CEEEEEETTCCCGGGEEEEEEC-------CC
T ss_pred             CCCCEEEEEEccccCCCC-EEEEECCCCCEEEEEEcccc------ccC-cEEEEEcCCCCCCCcEEEEEEEeccccCCCe
Confidence            356688999999888864 99999999999999999876      564 45688888765    79999997  3  578


Q ss_pred             ceeEecCCCCcceeEEEEEecccCCCcceEEEEEe
Q 029587           84 WQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIV  118 (191)
Q Consensus        84 w~~~~~~~~~~~~~~f~vkk~~~~~~k~~~~V~~~  118 (191)
                      |+++.++...++.+.++|+.+   ++..+++|.-.
T Consensus       131 ~~V~~~~~~~~~~~~~~I~G~---~~~~~f~I~~~  162 (217)
T 1zxu_A          131 LDVFLGHNKDEKRCDFRVKGS---WLERSCVVYAG  162 (217)
T ss_dssp             EEEEETTCCC-CCCSEEEESC---TTTTCCEEEET
T ss_pred             EEEEECCCCCCCceEEEEEEe---EeCCEEEEEEC
Confidence            999987644333466777654   34566777643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	191
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	2e-31

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	191
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	100.0
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	97.46