Citrus Sinensis ID: 029644

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Protein Sequence
MKMRGNVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEEEEGRT
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mkmrgnvsdnssssinrfpmlkLVDCFLRISAIPLSIAAIWLTVtnqednsdygklkfsnltglKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYngdqqvtwseTCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRffsmfdppsvssnkeeeegrt
Flexible Loop (DISEMBL)
mkmrgnvsdnssssinrfPMLKLVDCFLRISAIPLSIAAIWLTVtnqednsdygKLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSmfdppsvssnkeeeegrt
Low Complexity Region (SEG)
MKMRGNVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEEEEGRT
Disordered region (IsUnstruct)
*****************FPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMF****************
Disordered Region (DISOPRED)
**********************LVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFS******************
Disordered Region (DISEMBL)
************SSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPP*************
Disordered Region (DISPRO)
*****************FPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDP**************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKMRGNVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEEEEGRT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	190	2.2.26 [Sep-21-2011]
B9HTL5	170	CASP-like protein POPTRDR	yes	no	0.884	0.988	0.732	6e-69
A7P0P3	186	CASP-like protein VIT_19s	yes	no	0.952	0.973	0.697	4e-67
B9SV84	173	CASP-like protein RCOM_13	N/A	no	0.884	0.971	0.676	1e-64
C6T2J5	185	CASP-like protein 4 OS=Gl	yes	no	0.968	0.994	0.559	2e-53
Q9FFT2	194	CASP-like protein At5g549	yes	no	0.878	0.860	0.547	1e-45
D7MUY4	193	CASP-like protein ARALYDR	N/A	no	0.826	0.813	0.547	5e-44
A2X2I0	201	CASP-like protein OsI_063	N/A	no	0.884	0.835	0.421	2e-38
Q6YW53	201	CASP-like protein Os02g02	yes	no	0.884	0.835	0.415	4e-38
C5XY39	180	CASP-like protein Sb04g00	N/A	no	0.889	0.938	0.398	5e-33
D7KFC7	204	CASP-like protein ARALYDR	N/A	no	0.878	0.818	0.389	8e-32

>sp|B9HTL5|CSPLC_POPTR CASP-like protein POPTRDRAFT_833824 OS=Populus trichocarpa GN=POPTRDRAFT_833824 PE=3 SV=1

 Score =  259 bits (663), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 123/168 (73%), Positives = 147/168 (87%)

Query: 20  MLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAF 79
           MLKL+D  LR+S IPLS+A IWLTVTN++DNS YG LK+S+LTGLKYMV ISGICA YAF
Sbjct: 1   MLKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAF 60

Query: 80  IAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYG 139
           IAAVS+W+R +VTK WLFF+SDQIVAYLMVTSG AVLEILYLAYNGD++V+WSE C++YG
Sbjct: 61  IAAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYG 120

Query: 140 KFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEEEE 187
           KFC R+K+A +LHA+AL CFIILAVISA+R FS+F+PP V S   EE+
Sbjct: 121 KFCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPLVPSKVVEED 168

Populus trichocarpa (taxid: 3694)

>sp|A7P0P3|CSPL3_VITVI CASP-like protein VIT_19s0090g00570 OS=Vitis vinifera GN=VIT_19s0090g00570 PE=2 SV=1

 Score =  253 bits (647), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 127/182 (69%), Positives = 153/182 (84%), Gaps = 1/182 (0%)

Query: 6   NVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLK 65
           N+++ +  S    P LKL+DC LR+  IPLS+A IWLTVTNQ+DNS YGKL+FSNLTGLK
Sbjct: 3   NLAETAPISSAHIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLK 62

Query: 66  YMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNG 125
           YMVCISGI AGYA +A V+SW+R LV KAWLFF+SDQI+AYLMVTSGAAVLEILYLAY G
Sbjct: 63  YMVCISGISAGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKG 122

Query: 126 DQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEE 185
           D+ V+WSE CS+YG+FCSR+ +A  LHA+AL CF++LAVISA+R FSMF+PP VSS + E
Sbjct: 123 DRGVSWSEACSSYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPP-VSSKEVE 181

Query: 186 EE 187
           EE
Sbjct: 182 EE 183

Vitis vinifera (taxid: 29760)

>sp|B9SV84|CSPL7_RICCO CASP-like protein RCOM_1302390 OS=Ricinus communis GN=RCOM_1302390 PE=2 SV=1

 Score =  245 bits (625), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 115/170 (67%), Positives = 139/170 (81%), Gaps = 2/170 (1%)

Query: 19  PMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYA 78
           P+LKL+D  LR+S IPLS A IWLTVTN +DNS YG LK+SN+ GLKYMVCIS ICA YA
Sbjct: 3   PLLKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYA 62

Query: 79  FIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTY 138
           F+AAVS W++ LV K WLFF+SDQI+AYLMVTS AA +EILY+AYNGDQ+VTWSE C++Y
Sbjct: 63  FVAAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSY 122

Query: 139 GKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEEEEG 188
           GKFC+ +K A +LHA+ L  FI+LAVISA+R FSM+ PP   S+KE  EG
Sbjct: 123 GKFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPP--VSSKETVEG 170

Ricinus communis (taxid: 3988)

>sp|C6T2J5|CSPL4_SOYBN CASP-like protein 4 OS=Glycine max PE=2 SV=1

 Score =  208 bits (530), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 104/186 (55%), Positives = 141/186 (75%), Gaps = 2/186 (1%)

Query: 3   MRGNVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLT 62
           MR ++ D++S   +  PML   D  LR+ AIPLS+A +W+TVTN+EDNS YG LK++NL+
Sbjct: 1   MRTHIDDSASGKNHHLPMLWFFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLS 60

Query: 63  GLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLA 122
            LKYMV +S +CA YA +AA  S +R  V+KAW+FF+SDQIVAYL +TS AAV+E+ YLA
Sbjct: 61  ALKYMVLVSALCACYALLAAACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLA 120

Query: 123 YNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSN 182
           YNG ++ +WSE CS+YG FCS++K+A +LH +   CF ++AVISAFR FS+FDPP V  N
Sbjct: 121 YNGAKEDSWSEACSSYGSFCSKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFV--N 178

Query: 183 KEEEEG 188
            +E +G
Sbjct: 179 SQEVQG 184

Glycine max (taxid: 3847)

>sp|Q9FFT2|CSPLX_ARATH CASP-like protein At5g54980 OS=Arabidopsis thaliana GN=At5g54980 PE=2 SV=1

 Score =  182 bits (462), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/168 (54%), Positives = 120/168 (71%), Gaps = 1/168 (0%)

Query: 19  PM-LKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGY 77
           PM LK++D  LR+S +PLS+A IWLTVTN E N DYG L+++++ GLKYMV +S I A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 78  AFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCST 137
           A ++ VSSW+  LV+KAWLFFI DQ++AY+M TS A   EI+YL   GD+ VTWSE CS+
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 138 YGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEE 185
           Y  +CS++ IA  LH   L  F+ L+VISA+R FS FDPP  S    +
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQTNND 193

Arabidopsis thaliana (taxid: 3702)

>sp|D7MUY4|CSPL2_ARALL CASP-like protein ARALYDRAFT_495581 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495581 PE=3 SV=1

 Score =  177 bits (448), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 86/157 (54%), Positives = 114/157 (72%)

Query: 21  LKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFI 80
           LK++D  LR+S +PLS+A IWLTVTN E N DYG L ++++ GLKYMV +S I A YA +
Sbjct: 28  LKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLDYNSIMGLKYMVGVSAISAIYALL 87

Query: 81  AAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGK 140
           + +S W+  LV+KAWLFF+ DQ++AY+M TS A   EI+YL   GD+ VTWSE CS+Y  
Sbjct: 88  STISLWVTCLVSKAWLFFVPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSSYPH 147

Query: 141 FCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPP 177
           +CS++ IA  LH   L  F+ L+VISA+R FS FDPP
Sbjct: 148 YCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPP 184

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|A2X2I0|CSPL9_ORYSI CASP-like protein OsI_06397 OS=Oryza sativa subsp. indica GN=OsI_06397 PE=2 SV=1

 Score =  158 bits (400), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 119/171 (69%), Gaps = 3/171 (1%)

Query: 22  KLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFIA 81
           +L +  LR+ A+PL++A++W   TN++ +  YG+++FS+L+G +Y+V I+ I A Y+  +
Sbjct: 26  RLAELGLRVCAVPLAVASVWEMATNKQVDETYGEVRFSDLSGFRYLVWINAITAAYSVAS 85

Query: 82  AVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKF 141
            + S  RF+    WL FI DQ  AYL++TS +A  E++YLA  GD++V+W E CS +G+F
Sbjct: 86  ILLSSCRFITRFDWLIFILDQASAYLLLTSASAAAEVVYLAREGDREVSWGEVCSYFGRF 145

Query: 142 CSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKE---EEEGR 189
           C    ++  L+A AL CF+ L++ISAFR F+ F+PPS S++K+   +E+G+
Sbjct: 146 CGAATVSVALNAAALLCFMALSLISAFRVFTKFNPPSQSNSKQQLSQEQGK 196

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q6YW53|CSPL9_ORYSJ CASP-like protein Os02g0219900 OS=Oryza sativa subsp. japonica GN=Os02g0219900 PE=2 SV=1

 Score =  157 bits (397), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 119/171 (69%), Gaps = 3/171 (1%)

Query: 22  KLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFIA 81
           +L +  LR+ A+PL++A++W   TN++ +  YG+++FS+L+G +Y+V I+ I A Y+  +
Sbjct: 26  RLAELGLRVCAVPLAVASVWEMATNKQVDETYGEVRFSDLSGFRYLVWINAITAAYSVAS 85

Query: 82  AVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKF 141
            + S  RF+    WL F+ DQ  AYL++TS +A  E++YLA  GD++V+W E CS +G+F
Sbjct: 86  ILLSSCRFITRFDWLIFLLDQASAYLLLTSASAAAEVVYLAREGDREVSWGEVCSYFGRF 145

Query: 142 CSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKE---EEEGR 189
           C    ++  L+A AL CF+ L++ISAFR F+ F+PPS S++K+   +E+G+
Sbjct: 146 CGAATVSVALNAAALLCFMALSLISAFRVFTKFNPPSQSNSKQQLSQEQGK 196

Oryza sativa subsp. japonica (taxid: 39947)

>sp|C5XY39|CSPLA_SORBI CASP-like protein Sb04g007720 OS=Sorghum bicolor GN=Sb04g007720 PE=2 SV=1

 Score =  140 bits (353), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 110/173 (63%), Gaps = 4/173 (2%)

Query: 21  LKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFI 80
           LK+ +  LR+  +PL++A++W   TN + +  YG++KFS+L+G  Y+V ++ + A YA +
Sbjct: 6   LKVPEMALRVCVVPLALASLWEMATNAQADDTYGEVKFSDLSGFSYLVGVNAVTAAYALV 65

Query: 81  AAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGK 140
           + + S L+ L    W+  + DQ  AYL+VTS +A  E+L LA  GD++V+W E CS +G+
Sbjct: 66  SILLSSLKPLARYDWVILVMDQASAYLLVTSASAAAELLQLARRGDREVSWGEVCSYFGR 125

Query: 141 FCSRIKIAFVLHAVALGCFIILAVISAFRFFSMF----DPPSVSSNKEEEEGR 189
           FC +  ++  LHA AL CF+ LA++SAFR  S       PP  +  +E E+GR
Sbjct: 126 FCGKATVSLALHAAALACFVALALVSAFRVLSTTGSSCHPPKHAQAQEHEQGR 178

Sorghum bicolor (taxid: 4558)

>sp|D7KFC7|CSPLB_ARALL CASP-like protein ARALYDRAFT_471923 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471923 PE=3 SV=1

 Score =  136 bits (342), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 113/172 (65%), Gaps = 5/172 (2%)

Query: 19  PMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYA 78
           P ++  +  LR++ + L +AA+ + + + E N ++G + +SNLT  +Y+V  +GICAGY+
Sbjct: 28  PGIRTAETMLRLAPVGLCVAALVVMLKDSETN-EFGSISYSNLTAFRYLVHANGICAGYS 86

Query: 79  FI-AAVSSWLRFLVT--KAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETC 135
            + AA+++  R   T  + W FF  DQ++ YL++ +GA   E+LYLAYNGD  +TWS+ C
Sbjct: 87  LLSAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDAC 146

Query: 136 STYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPS-VSSNKEEE 186
           S+YG FC R   + ++    +  +I+L++IS+++ F+ FDPPS V S+K  E
Sbjct: 147 SSYGGFCHRATASVIITFFVVCFYILLSLISSYKLFTRFDPPSIVDSDKTLE 198

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
224109564	170	predicted protein [Populus trichocarpa]	0.884	0.988	0.732	3e-67
225460947	186	PREDICTED: UPF0497 membrane protein 16 [	0.952	0.973	0.697	2e-65
147776968	186	hypothetical protein VITISV_007688 [Viti	0.952	0.973	0.697	3e-65
388495704	187	unknown [Medicago truncatula]	0.963	0.978	0.597	3e-64
255578066	173	conserved hypothetical protein [Ricinus	0.884	0.971	0.676	7e-63
388507636	186	unknown [Lotus japonicus]	0.968	0.989	0.605	4e-56
351725497	185	CASP-like protein 4 [Glycine max] gi|288	0.968	0.994	0.559	8e-52
449521561	171	PREDICTED: CASP-like protein POPTRDRAFT_	0.857	0.953	0.601	6e-50
449463260	171	PREDICTED: CASP-like protein POPTRDRAFT_	0.857	0.953	0.595	1e-49
15240435	194	uncharacterized protein [Arabidopsis tha	0.878	0.860	0.547	6e-44

>gi|224109564|ref|XP_002315238.1| predicted protein [Populus trichocarpa] gi|341958558|sp|B9HTL5.1|CSPLC_POPTR RecName: Full=CASP-like protein POPTRDRAFT_833824 gi|222864278|gb|EEF01409.1| predicted protein [Populus trichocarpa]

 Score =  259 bits (663), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 123/168 (73%), Positives = 147/168 (87%)

Query: 20  MLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAF 79
           MLKL+D  LR+S IPLS+A IWLTVTN++DNS YG LK+S+LTGLKYMV ISGICA YAF
Sbjct: 1   MLKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAF 60

Query: 80  IAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYG 139
           IAAVS+W+R +VTK WLFF+SDQIVAYLMVTSG AVLEILYLAYNGD++V+WSE C++YG
Sbjct: 61  IAAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYG 120

Query: 140 KFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEEEE 187
           KFC R+K+A +LHA+AL CFIILAVISA+R FS+F+PP V S   EE+
Sbjct: 121 KFCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPLVPSKVVEED 168

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460947|ref|XP_002279766.1| PREDICTED: UPF0497 membrane protein 16 [Vitis vinifera] gi|226713187|sp|A7P0P3.1|CSPL3_VITVI RecName: Full=CASP-like protein VIT_19s0090g00570 gi|297737447|emb|CBI26648.3| unnamed protein product [Vitis vinifera]

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 127/182 (69%), Positives = 153/182 (84%), Gaps = 1/182 (0%)

Query: 6   NVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLK 65
           N+++ +  S    P LKL+DC LR+  IPLS+A IWLTVTNQ+DNS YGKL+FSNLTGLK
Sbjct: 3   NLAETAPISSAHIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLK 62

Query: 66  YMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNG 125
           YMVCISGI AGYA +A V+SW+R LV KAWLFF+SDQI+AYLMVTSGAAVLEILYLAY G
Sbjct: 63  YMVCISGISAGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKG 122

Query: 126 DQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEE 185
           D+ V+WSE CS+YG+FCSR+ +A  LHA+AL CF++LAVISA+R FSMF+PP VSS + E
Sbjct: 123 DRGVSWSEACSSYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPP-VSSKEVE 181

Query: 186 EE 187
           EE
Sbjct: 182 EE 183

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147776968|emb|CAN63416.1| hypothetical protein VITISV_007688 [Vitis vinifera]

 Score =  253 bits (645), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/182 (69%), Positives = 152/182 (83%), Gaps = 1/182 (0%)

Query: 6   NVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLK 65
           N+++ +  S    P LKL+DC LR+  IPLS+A IWLTVTNQ+DNS YGKL+FSNLTGLK
Sbjct: 3   NLAETAPISSAHIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTGLK 62

Query: 66  YMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNG 125
           YMVCISGI AGYA +A V+SW+R LV KAWLFF+SDQI+AYLMVTSGAAVLEILYLAY G
Sbjct: 63  YMVCISGISAGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAYKG 122

Query: 126 DQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEE 185
           D+ V+WSE CS YG+FCSR+ +A  LHA+AL CF++LAVISA+R FSMF+PP VSS + E
Sbjct: 123 DRGVSWSEACSXYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPP-VSSKEVE 181

Query: 186 EE 187
           EE
Sbjct: 182 EE 183

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495704|gb|AFK35918.1| unknown [Medicago truncatula]

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 110/184 (59%), Positives = 152/184 (82%), Gaps = 1/184 (0%)

Query: 4   RGNVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTG 63
           R ++ DN+S   N  PMLKL+D  LR+ ++PLS+A IW+TVTN++DN+ YG LK+S+++G
Sbjct: 3   RVHIDDNASGE-NNLPMLKLLDSSLRLCSVPLSLATIWITVTNKQDNTSYGTLKYSDISG 61

Query: 64  LKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAY 123
           LKYM+ +S +CAGYA +AAV SW+R+L+TKAW+FFISDQ+VAYLMVTS AA +EI YLAY
Sbjct: 62  LKYMIFVSALCAGYAIVAAVCSWVRYLMTKAWIFFISDQVVAYLMVTSIAATMEIYYLAY 121

Query: 124 NGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNK 183
           NG ++ +WS+ CS+YGKFCS++K+A +LH +  GCF +LA+ISAFR FS+FDPPSV+S +
Sbjct: 122 NGAREDSWSQACSSYGKFCSKVKLALILHMITFGCFFVLAIISAFRAFSVFDPPSVNSQE 181

Query: 184 EEEE 187
             E+
Sbjct: 182 VYED 185

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578066|ref|XP_002529903.1| conserved hypothetical protein [Ricinus communis] gi|288559184|sp|B9SV84.1|CSPL7_RICCO RecName: Full=CASP-like protein RCOM_1302390 gi|223530580|gb|EEF32457.1| conserved hypothetical protein [Ricinus communis]

 Score =  245 bits (625), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 115/170 (67%), Positives = 139/170 (81%), Gaps = 2/170 (1%)

Query: 19  PMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYA 78
           P+LKL+D  LR+S IPLS A IWLTVTN +DNS YG LK+SN+ GLKYMVCIS ICA YA
Sbjct: 3   PLLKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYA 62

Query: 79  FIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTY 138
           F+AAVS W++ LV K WLFF+SDQI+AYLMVTS AA +EILY+AYNGDQ+VTWSE C++Y
Sbjct: 63  FVAAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSY 122

Query: 139 GKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEEEEG 188
           GKFC+ +K A +LHA+ L  FI+LAVISA+R FSM+ PP   S+KE  EG
Sbjct: 123 GKFCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPP--VSSKETVEG 170

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507636|gb|AFK41884.1| unknown [Lotus japonicus]

 Score =  223 bits (567), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 112/185 (60%), Positives = 146/185 (78%), Gaps = 1/185 (0%)

Query: 3   MRGNVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLT 62
           MR ++ D S S  N  PMLK+ D  LR+ A+PLS+A IW+TVTN +DNS YG LK+SNL 
Sbjct: 1   MRTHIHD-SPSVKNHLPMLKVFDSSLRLFAVPLSVATIWITVTNNQDNSIYGMLKYSNLL 59

Query: 63  GLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLA 122
           GLKYMV +S +CA YA +AA  SW+R++V+KAW+FFISDQIVAYL+VTS AA +EI YLA
Sbjct: 60  GLKYMVFVSALCAAYALVAAACSWVRYVVSKAWIFFISDQIVAYLLVTSVAASMEIHYLA 119

Query: 123 YNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSN 182
           YNG ++ +WSE CS YG+FCS++K+AF+L  +   CFIILAVISAFR FS+FDPP V++ 
Sbjct: 120 YNGAKEDSWSEACSIYGRFCSKVKLAFILQMITFLCFIILAVISAFRAFSLFDPPFVTAQ 179

Query: 183 KEEEE 187
           + +E+
Sbjct: 180 EMQED 184

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725497|ref|NP_001235047.1| CASP-like protein 4 [Glycine max] gi|288559180|sp|C6T2J5.1|CSPL4_SOYBN RecName: Full=CASP-like protein 4 gi|255630994|gb|ACU15861.1| unknown [Glycine max]

 Score =  208 bits (530), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 104/186 (55%), Positives = 141/186 (75%), Gaps = 2/186 (1%)

Query: 3   MRGNVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLT 62
           MR ++ D++S   +  PML   D  LR+ AIPLS+A +W+TVTN+EDNS YG LK++NL+
Sbjct: 1   MRTHIDDSASGKNHHLPMLWFFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLS 60

Query: 63  GLKYMVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLA 122
            LKYMV +S +CA YA +AA  S +R  V+KAW+FF+SDQIVAYL +TS AAV+E+ YLA
Sbjct: 61  ALKYMVLVSALCACYALLAAACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLA 120

Query: 123 YNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSN 182
           YNG ++ +WSE CS+YG FCS++K+A +LH +   CF ++AVISAFR FS+FDPP V  N
Sbjct: 121 YNGAKEDSWSEACSSYGSFCSKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFV--N 178

Query: 183 KEEEEG 188
            +E +G
Sbjct: 179 SQEVQG 184

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449521561|ref|XP_004167798.1| PREDICTED: CASP-like protein POPTRDRAFT_833824-like [Cucumis sativus]

 Score =  202 bits (513), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 98/163 (60%), Positives = 129/163 (79%)

Query: 20  MLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAF 79
           + K +D  LR+ ++P S+AA+WLTVTN++DN DYG L+F NL+GLKY+VCIS I A YAF
Sbjct: 9   LFKFLDFSLRLCSVPFSVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAF 68

Query: 80  IAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYG 139
           +AA  S  R+ + +AW+FF+SDQIVAYLMV SGAAV EILY+AYNGD++V+WSE CS+YG
Sbjct: 69  LAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYG 128

Query: 140 KFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSN 182
           KFC+ +K+A +  A+   CF  LA+ISAFR FS+F PP +SS 
Sbjct: 129 KFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 171

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463260|ref|XP_004149352.1| PREDICTED: CASP-like protein POPTRDRAFT_833824-like [Cucumis sativus]

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 97/163 (59%), Positives = 129/163 (79%)

Query: 20  MLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAF 79
           + K +D  LR+ ++P ++AA+WLTVTN++DN DYG L+F NL+GLKY+VCIS I A YAF
Sbjct: 9   LFKFLDFSLRLCSVPFTVAALWLTVTNRQDNPDYGNLEFHNLSGLKYLVCISAIAAVYAF 68

Query: 80  IAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYG 139
           +AA  S  R+ + +AW+FF+SDQIVAYLMV SGAAV EILY+AYNGD++V+WSE CS+YG
Sbjct: 69  LAAAVSCFRWFIVRAWVFFVSDQIVAYLMVASGAAVGEILYIAYNGDREVSWSEACSSYG 128

Query: 140 KFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSN 182
           KFC+ +K+A +  A+   CF  LA+ISAFR FS+F PP +SS 
Sbjct: 129 KFCNNMKMALIFQALGFACFFPLAIISAFRAFSVFPPPLISSQ 171

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240435|ref|NP_200309.1| uncharacterized protein [Arabidopsis thaliana] gi|75170289|sp|Q9FFT2.1|CSPLX_ARATH RecName: Full=CASP-like protein At5g54980 gi|9758278|dbj|BAB08777.1| unnamed protein product [Arabidopsis thaliana] gi|27754655|gb|AAO22772.1| unknown protein [Arabidopsis thaliana] gi|28394049|gb|AAO42432.1| unknown protein [Arabidopsis thaliana] gi|332009182|gb|AED96565.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 92/168 (54%), Positives = 120/168 (71%), Gaps = 1/168 (0%)

Query: 19  PM-LKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGY 77
           PM LK++D  LR+S +PLS+A IWLTVTN E N DYG L+++++ GLKYMV +S I A Y
Sbjct: 26  PMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKYMVGVSAISAIY 85

Query: 78  AFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCST 137
           A ++ VSSW+  LV+KAWLFFI DQ++AY+M TS A   EI+YL   GD+ VTWSE CS+
Sbjct: 86  ALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSS 145

Query: 138 YGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEE 185
           Y  +CS++ IA  LH   L  F+ L+VISA+R FS FDPP  S    +
Sbjct: 146 YPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQTNND 193

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
TAIR|locus:2160200	194	AT5G54980 [Arabidopsis thalian	0.936	0.917	0.525	4.8e-46
TAIR|locus:2020297	204	AT1G17200 "AT1G17200" [Arabido	0.868	0.808	0.388	7.7e-32
TAIR|locus:2091045	178	AT3G14380 "AT3G14380" [Arabido	0.873	0.932	0.319	1.4e-23
TAIR|locus:2058744	201	AT2G35760 "AT2G35760" [Arabido	0.873	0.825	0.315	3.7e-16
TAIR|locus:505006479	182	AT4G16442 "AT4G16442" [Arabido	0.810	0.846	0.298	1.1e-14
TAIR|locus:2053514	206	CASP1 "AT2G36100" [Arabidopsis	0.863	0.796	0.297	7.9e-14
TAIR|locus:2117308	170	AT4G25040 "AT4G25040" [Arabido	0.778	0.870	0.257	5.2e-10
TAIR|locus:2117502	175	AT4G25830 "AT4G25830" [Arabido	0.826	0.897	0.230	1.8e-09
TAIR|locus:2150986	187	CASP5 "Casparian strip membran	0.763	0.775	0.259	5.6e-09
TAIR|locus:2128776	164	AT4G03540 "AT4G03540" [Arabido	0.7	0.810	0.248	9.7e-09

TAIR|locus:2160200 AT5G54980 [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 94/179 (52%), Positives = 124/179 (69%)

Query:     8 SDNSSSSINRFPM-LKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKY 66
             S +S     + PM LK++D  LR+S +PLS+A IWLTVTN E N DYG L+++++ GLKY
Sbjct:    15 SSSSKQQQPQAPMSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDYGNLEYNSIMGLKY 74

Query:    67 MVCISGICAGYAFIAAVSSWLRFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGD 126
             MV +S I A YA ++ VSSW+  LV+KAWLFFI DQ++AY+M TS A   EI+YL   GD
Sbjct:    75 MVGVSAISAIYALLSTVSSWVTCLVSKAWLFFIPDQVLAYVMTTSVAGATEIVYLLNKGD 134

Query:   127 QQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPSVSSNKEE 185
             + VTWSE CS+Y  +CS++ IA  LH   L  F+ L+VISA+R FS FDPP  S    +
Sbjct:   135 KIVTWSEMCSSYPHYCSKLTIALGLHVFVLFFFLFLSVISAYRAFSPFDPPCDSQTNND 193

GO:0005634 "nucleus" evidence=ISM

GO:0005747 "mitochondrial respiratory chain complex I" evidence=IBA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IBA

GO:0045333 "cellular respiration" evidence=IBA

TAIR|locus:2020297 AT1G17200 "AT1G17200" [Arabidopsis thaliana (taxid:3702)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 66/170 (38%), Positives = 111/170 (65%)

Query:    21 LKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFI 80
             ++  +  LR++ + L +AA+ + + + E N ++G + +SNLT  +Y+V  +GICAGY+ +
Sbjct:    30 IRTAETMLRLAPVGLCVAALVVMLKDSETN-EFGSISYSNLTAFRYLVHANGICAGYSLL 88

Query:    81 -AAVSSWLRFLVT--KAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCST 137
              AA+++  R   T  + W FF  DQ++ YL++ +GA   E+LYLAYNGD  +TWS+ CS+
Sbjct:    89 SAAIAAMPRSSSTMPRVWTFFCLDQLLTYLVLAAGAVSAEVLYLAYNGDSAITWSDACSS 148

Query:   138 YGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPPS-VSSNKEEE 186
             YG FC R   + ++    +  +I+L++IS+++ F+ FDPPS V S K  E
Sbjct:   149 YGGFCHRATASVIITFFVVCFYIVLSLISSYKLFTRFDPPSIVDSAKNLE 198

GO:0005515 "protein binding" evidence=IPI

GO:0080167 "response to karrikin" evidence=IEP

GO:0006949 "syncytium formation" evidence=RCA

TAIR|locus:2091045 AT3G14380 "AT3G14380" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 55/172 (31%), Positives = 101/172 (58%)

Query:     9 DNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMV 68
             D S+  +NR    K  +  LR++++ LSI  + + + N   N ++G + +SN+    Y+V
Sbjct:    10 DESALVLNRTE--KSAEAVLRVASMALSITGLVIMIKNSISN-EFGSVSYSNIGAFMYLV 66

Query:    69 CISGICAGYAFIAAVSSW-LRFLVTKAWL--FFISDQIVAYLMVTSGAAVLEILYLAYNG 125
               +G+CA Y+ ++A++   L   ++K  +   F+ DQ+V Y+++ +GA   E +YLAY G
Sbjct:    67 SANGVCAAYSLLSALAILALPCPISKVQVRTLFLLDQVVTYVVLAAGAVSAETVYLAYYG 126

Query:   126 DQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDPP 177
             +  +TWS  C +YG FC    I+ V   V    +++L++IS++R F+ F+ P
Sbjct:   127 NIPITWSSACDSYGSFCHNALISVVFTFVVSLLYMLLSLISSYRLFTRFEAP 178

GO:0016020 "membrane" evidence=ISS

GO:0010227 "floral organ abscission" evidence=IEP

TAIR|locus:2058744 AT2G35760 "AT2G35760" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 58/184 (31%), Positives = 97/184 (52%)

Query:     5 GNVSDNSSSS--INRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDY---GKLKFS 59
             GNVS +++    I+R   +++ +  LR     L++ A  L  T+ +    +    K KF+
Sbjct:    11 GNVSGSTTKMKLIDR--KVRVTELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFT 68

Query:    60 NLTGLKYMVCISGICAGYAFIAAVSSWL-----RFLVTK--AWLFFISDQIVAYLMVTSG 112
             ++  L  +V ++GI AGY+ + AV   +     R L +K  AW  F  DQ VAYL V   
Sbjct:    69 DMKALVLLVVVNGIAAGYSLVQAVRCVVGLMKGRVLFSKPLAWAIFFGDQAVAYLCVAGV 128

Query:   113 AAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIK--IAFVLHAVALGCFIILAVISAFRF 170
             AA  +    A  G+ ++ W + C+ YGKFC+++   IA  L A  +G  ++++ ISAF  
Sbjct:   129 AAAAQSAAFAKLGEPELQWMKICNMYGKFCNQVGEGIASALFA-CIG-MVLISCISAFGV 186

Query:   171 FSMF 174
             F ++
Sbjct:   187 FRLY 190

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0015996 "chlorophyll catabolic process" evidence=RCA

TAIR|locus:505006479 AT4G16442 "AT4G16442" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 49/164 (29%), Positives = 84/164 (51%)

Query:    21 LKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLK---YMVCISGICAGY 77
             ++L +  LR S    ++ A+ L VT+ E    +   K +  T +K   ++V  +GI A Y
Sbjct:     8 MRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVY 67

Query:    78 AFIAAVSSWL-----RFLVTK--AWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVT 130
             + + +V   +     + L +K  AW FF  DQ +AYL V + AA  E   +A  G++ + 
Sbjct:    68 SLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEEDLQ 127

Query:   131 WSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMF 174
             W   C+ YGKFC+++ I      +A    + ++ ISAF  F ++
Sbjct:   128 WMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2053514 CASP1 "AT2G36100" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 52/175 (29%), Positives = 85/175 (48%)

Query:     2 KMRGNVSDNSSSSINRFPMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGK-LKFS- 59
             K +G V+  S     R   L + D  LR++AI ++I A  +  T +E    + + L+F  
Sbjct:    28 KKKGFVAVASRGGAKRG--LAIFDFLLRLAAIAVTIGAASVMYTAEETLPFFTQFLQFQA 85

Query:    60 ---NLTGLKYMVCISGICAGYAFIA---AVSSWLR-FLVTKAWLFFISDQIVAYLMVTSG 112
                +L   +Y V    + A Y  ++   ++ S +R   V    +  I D +V  L  ++ 
Sbjct:    86 GYDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSAA 145

Query:   113 AAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISA 167
             AA   I YLA+NG+Q   W   C  +G FC  +  A V  ++A+  FI+L +ISA
Sbjct:   146 AAAASITYLAHNGNQSTNWLPICQQFGDFCQNVSTAVVADSIAILFFIVLIIISA 200

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2117308 AT4G25040 "AT4G25040" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 41/159 (25%), Positives = 73/159 (45%)

Query:    17 RFPMLKL-VDCFLRISAIPLSIAAIWLTVTNQEDNSDYG---KLKFSNLTGLKYMVCIS- 71
             R P+L L V   +R+  I  ++A++W+ +TN+E  S YG   + K+S  +  +Y+V    
Sbjct:     9 RTPLLNLGVQVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQI 68

Query:    72 GICAGYAFIAAVSSWLRFLVTKAWL---FFISDQIVAYLMVTSGAAVLEILYLAYNGDQQ 128
              +CA   F      W    V +  L    F  D +     +++ +A     Y+   G++Q
Sbjct:    69 AVCAATLFTLV---WACLAVRRRGLVFALFFFDLLTTLTAISAFSAAFAEGYVGKYGNKQ 125

Query:   129 VTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISA 167
               W   C     +CSR+ I+  +   +     IL V++A
Sbjct:   126 AGWLPICGYVHGYCSRVTISLAMSFASFILLFILTVLTA 164

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117502 AT4G25830 "AT4G25830" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 38/165 (23%), Positives = 72/165 (43%)

Query:    20 MLKL--VDCFLRISAI---PLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGIC 74
             M+KL   +  LR+  +    L+   I L    +E    +  + F  L  L+  + I  + 
Sbjct:     1 MVKLRETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVV 60

Query:    75 AGYAFIAAVSSWLRF---LVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTW 131
             A Y  +     W           W  ++ DQ  AY++    +A  +   L   G +++ W
Sbjct:    61 AAYNLVQLGLGWYNVEQKTSNPKWFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGSRELQW 120

Query:   132 SETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRFFSMFDP 176
              + C  + +FC ++  A +L+ +A    ++L+ ISAF  F ++ P
Sbjct:   121 MKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSP 165

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005747 "mitochondrial respiratory chain complex I" evidence=IBA

GO:0008137 "NADH dehydrogenase (ubiquinone) activity" evidence=IBA

GO:0008150 "biological_process" evidence=ND

GO:0045333 "cellular respiration" evidence=IBA

TAIR|locus:2150986 CASP5 "Casparian strip membrane domain protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 5.6e-09, P = 5.6e-09
 Identities = 41/158 (25%), Positives = 78/158 (49%)

Query:    21 LKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKL-----KFSNLTGLKYMVCISGICA 75
             + +++  LRI A   +I +  L  T  E    + +      ++++L  L + V  + + +
Sbjct:    25 IAILEFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANAVVS 84

Query:    76 GYAFIAAVSSWLRFLVTKAW----LFFISDQIVAYL-MVTSGAA-VLEILYLAYNGDQQV 129
             GY  ++   +++  +  K      L  I D  VA L ++TSGA+    I+YLA+NG+ + 
Sbjct:    85 GYLILSLTLAFVHIVKRKTQNTRILLIILD--VAMLGLLTSGASSAAAIVYLAHNGNNKT 142

Query:   130 TWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISA 167
              W   C  +  FC RI  + +   +A+   I+L ++SA
Sbjct:   143 NWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSA 180

GO:0005739 "mitochondrion" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0007043 "cell-cell junction assembly" evidence=IDA

GO:0042545 "cell wall modification" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0048226 "Casparian strip" evidence=IDA

TAIR|locus:2128776 AT4G03540 "AT4G03540" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 36/145 (24%), Positives = 72/145 (49%)

Query:    28 LRISAIPLSIAAIWLTVTNQEDNSDYG---KLKFSNLTGLKYMVCISGICAGYAFIAAVS 84
             LR++A   ++AA+ + +T++E  S      + K++++   KY V  + + + Y+F+    
Sbjct:    13 LRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSVYSFLVL-- 70

Query:    85 SWLRFLVTKA--WLFFIS-DQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKF 141
                 FL  ++  W F +  D ++  L+ +S +A L +  +   G+    W   C    KF
Sbjct:    71 ----FLPKESLLWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWLPICGQVPKF 126

Query:   142 CSRIKIAFVLHAVALGCFIILAVIS 166
             C +I  A +   VAL  +++L + S
Sbjct:   127 CDQITGALIAGFVALVLYVLLLLYS 151

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FFT2	CSPLX_ARATH	No assigned EC number	0.5476	0.8789	0.8608	yes	no
A7P0P3	CSPL3_VITVI	No assigned EC number	0.6978	0.9526	0.9731	yes	no
B9HTL5	CSPLC_POPTR	No assigned EC number	0.7321	0.8842	0.9882	yes	no
C6T2J5	CSPL4_SOYBN	No assigned EC number	0.5591	0.9684	0.9945	yes	no
Q6YW53	CSPL9_ORYSJ	No assigned EC number	0.4152	0.8842	0.8358	yes	no
D7MUY4	CSPL2_ARALL	No assigned EC number	0.5477	0.8263	0.8134	N/A	no
B9SV84	CSPL7_RICCO	No assigned EC number	0.6764	0.8842	0.9710	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	190
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	4e-30
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	5e-19

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score =  107 bits (270), Expect = 4e-30
 Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 9/149 (6%)

Query: 19  PMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDY---GKLKFSNLTGLKYMVCISGICA 75
             L+L +  LR++A  L++AA  +  TN++    +    K  FS+L   +Y+V  + I A
Sbjct: 2   RPLRLAELVLRLAAFVLALAAAVVMGTNKQTKPFFFIQKKASFSDLPAFRYLVVANAIAA 61

Query: 76  GYAFIAAVSSWLRFLVTK------AWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQV 129
           GY+ +  V S       K      AWL FI DQ++AYL++ + +A   I+YLA NG+   
Sbjct: 62  GYSLLQLVLSVYLLSRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNSHA 121

Query: 130 TWSETCSTYGKFCSRIKIAFVLHAVALGC 158
            W + C+ +G+FC+R   +  L  +A   
Sbjct: 122 NWMKICNQFGRFCNRAAASVALSFLAFLL 150

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score = 79.0 bits (195), Expect = 5e-19
 Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 9/151 (5%)

Query: 28  LRISAIPLSIAAIWLTVTNQEDNSDYGKL-----KFSNLTGLKYMVCISGICAGYAFIAA 82
           LR+ A   ++AA  +  TN+E    + +L     KFS+L    Y V  + I  GY+ ++ 
Sbjct: 3   LRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSL 62

Query: 83  VSSWL----RFLVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTY 138
           V S      R +  K    F  D ++  L+ +  +A   + Y+   G+++  W + C  +
Sbjct: 63  VVSIFGLLKRRVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVF 122

Query: 139 GKFCSRIKIAFVLHAVALGCFIILAVISAFR 169
           GKFC RI  +  L   A+   ++L+++SA  
Sbjct: 123 GKFCDRIAGSLALSLFAVILLVLLSILSAIS 153

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	190
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.65

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=2e-43  Score=282.73  Aligned_cols=145  Identities=28%  Similarity=0.501  Sum_probs=136.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCcccc-----ceeeecchhHHHHHHHHHHHHHHHHHHHHHHHHh---h-hhchHHH
Q 029644           26 CFLRISAIPLSIAAIWLTVTNQEDNSDYG-----KLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLR---F-LVTKAWL   96 (190)
Q Consensus        26 l~LR~~a~~~sl~a~vvM~t~~qt~~~~~-----~~~f~~~~af~ylv~an~I~~~Ys~lql~~~~~~---~-~~~~~~~   96 (190)
                      ++||+++++++++|+++|+||+|+.++++     +++|+|+|+|+|+|++|+|+++|+++|+++++++   + ....+|+
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~~~~~~~~   80 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRRVFFKLIA   80 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecccceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence            47999999999999999999999998754     7999999999999999999999999999998863   2 1245899


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 029644           97 FFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAVISAFRF  170 (190)
Q Consensus        97 ~f~~Dqv~ayLL~saasAA~~v~~l~~~G~~~~~W~~iC~~~~~FC~~~~~Sv~lsflA~~~~~~~s~iSa~~L  170 (190)
                      +|++||+++||++||++||++++|++|+||+|++|+|+|+++++||||+.+|++++|+|++++++++++|++++
T Consensus        81 ~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        81 LFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGVFGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999975

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=2e-38  Score=251.52  Aligned_cols=140  Identities=32%  Similarity=0.569  Sum_probs=130.8

Q ss_pred             CchhHhHHHHHHHHHHHHHHHHHHHHhccCCCccc---cceeeecchhHHHHHHHHHHHHHHHHHHHHHHHHh------h
Q 029644           19 PMLKLVDCFLRISAIPLSIAAIWLTVTNQEDNSDY---GKLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLR------F   89 (190)
Q Consensus        19 ~~~~~~~l~LR~~a~~~sl~a~vvM~t~~qt~~~~---~~~~f~~~~af~ylv~an~I~~~Ys~lql~~~~~~------~   89 (190)
                      +..+..+++||+++++++++|+++|++|+||.++.   .+++|+|+++|+|++++|+|+++|+++|++.+++.      +
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~~~~~~~   80 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVFSIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSLSRGKLR   80 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceeeccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence            35688999999999999999999999999998764   48999999999999999999999999999999863      2


Q ss_pred             hhchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCccccccccccchhhhhhhHHHHHHHHHHHHHH
Q 029644           90 LVTKAWLFFISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGC  158 (190)
Q Consensus        90 ~~~~~~~~f~~Dqv~ayLL~saasAA~~v~~l~~~G~~~~~W~~iC~~~~~FC~~~~~Sv~lsflA~~~  158 (190)
                      .+...|++|++||+++||++||++||+++++++++|+++++|+++|+.+++||+|+++|++++|+|+++
T Consensus        81 ~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   81 SKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQFGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             ccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccchhhHHHHHHHHHHHHHHHHHC
Confidence            356789999999999999999999999999999999999999999999999999999999999999874

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.65  E-value=9.1e-07  Score=67.80  Aligned_cols=137  Identities=15%  Similarity=0.112  Sum_probs=101.1

Q ss_pred             hHhHHHHHHHHHHHHHHHHHHHHhccCCCccccceeeecchhHHHHHHHHHHHHHHHHHHHHHHHHh----hhhchHHHH
Q 029644           22 KLVDCFLRISAIPLSIAAIWLTVTNQEDNSDYGKLKFSNLTGLKYMVCISGICAGYAFIAAVSSWLR----FLVTKAWLF   97 (190)
Q Consensus        22 ~~~~l~LR~~a~~~sl~a~vvM~t~~qt~~~~~~~~f~~~~af~ylv~an~I~~~Ys~lql~~~~~~----~~~~~~~~~   97 (190)
                      +....+||+++++++++.+.+++....+..   .......++..|.+.+.++...+++..++....+    +...+.+.+
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   79 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGS---QIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFSLKYRPRIPWPLVE   79 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhccc---cccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhH
Confidence            456789999999999999999998874221   1245667788999999999999998888887742    234456689


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHhCCccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 029644           98 FISDQIVAYLMVTSGAAVLEILYLAYNGDQQVTWSETCSTYGKFCSRIKIAFVLHAVALGCFIILAV  164 (190)
Q Consensus        98 f~~Dqv~ayLL~saasAA~~v~~l~~~G~~~~~W~~iC~~~~~FC~~~~~Sv~lsflA~~~~~~~s~  164 (190)
                      ++.|.+++.+-+.+..+-+.-....+.+++   +++.+....+-|+...++.+++|+.++.+..+.+
T Consensus        80 ~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   80 FIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYSGCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998877665433222112211   2233445567799999999999999999988765

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00