Citrus Sinensis ID: 029655

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Protein Sequence
MGFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRWHLGHSHDHHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLSASPEVVRPVLGK
Secondary Structure (PSIPRED)
ccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEcccccc
Secondary Structure Prediction (SSPRO)
cccEEEccccccEEEEEEEccccccccccEEEEccccEccccccccccccccEHEEcHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcc
Coil and Loop (DISEMBL)
MGFRFRNINSMCRTYITRVSsqsnnyyhpiiqcqslnfqfqnhpssvcsnqhylkipirwhlghshdhhqqlsgkdaENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKaakapkdkehpyghgkfetLGALGISSMLLATAGGIAWHALDLLLDLLsaspevvrpvlgk
Flexible Loop (DISEMBL)
MGFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRWHLGHSHDHHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAkapkdkehpygHGKFETLGALGISSMLLATAGGIAWHALDLLLDLlsaspevvrpvlgk
Low Complexity Region (SEG)
MGFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRWHLGHSHDHHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTaiiadaahsisdVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHaldllldllsasPEVVRPVLGK
Disordered region (IsUnstruct)
***RFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRWHLGHSHDHHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKA*****HPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLSA***********
Disordered Region (DISOPRED)
***R***************************************************************************IFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLSASPEVVRPVLGK
Disordered Region (DISEMBL)
MGFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRWHLG**********GKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLSASPEVVRPVLGK
Disordered Region (DISPRO)
*GFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRWHLGHSHDHHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLSASPEVVRPVLGK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRWHLGHSHDHHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLSASPEVVRPVLGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	190	2.2.26 [Sep-21-2011]
Q8L725	471	Metal tolerance protein C	yes	no	0.657	0.265	0.742	3e-48
Q10LJ2	389	Metal tolerance protein 2	yes	no	0.568	0.277	0.75	2e-41
Q08970	484	Mitochondrial metal trans	yes	no	0.531	0.208	0.386	2e-13
Q03218	510	Mitochondrial metal trans	no	no	0.531	0.198	0.366	5e-11
O59758	397	Uncharacterized metal tra	yes	no	0.6	0.287	0.333	2e-10
Q57891	283	Uncharacterized transport	yes	no	0.394	0.265	0.386	3e-08
C0SP78	297	Uncharacterized transport	yes	no	0.521	0.333	0.320	5e-07
P46348	290	Uncharacterized transport	no	no	0.421	0.275	0.333	3e-06
P32798	439	Cobalt uptake protein COT	no	no	0.447	0.193	0.366	9e-06
O13918	387	Zinc homeostasis factor 1	no	no	0.536	0.263	0.317	2e-05

>sp|Q8L725|MTPC1_ARATH Metal tolerance protein C1 OS=Arabidopsis thaliana GN=MTPC1 PE=2 SV=1

 Score =  191 bits (485), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 95/128 (74%), Positives = 106/128 (82%), Gaps = 3/128 (2%)

Query: 59  RWHLGHSHDHHQQLS--GKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSIS 116
           RWH GH  DHHQQ    G++ E IFRLGL +D+GL+  KALTGYL GSTAIIADAAHS+S
Sbjct: 54  RWHFGHP-DHHQQYQKPGEEGEKIFRLGLTADIGLSVAKALTGYLCGSTAIIADAAHSVS 112

Query: 117 DVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDL 176
           DVVLS +AL SY+AA  PKDKEHPYGHGKFETLGALGIS+MLLAT  GIAWHALDLL   
Sbjct: 113 DVVLSGVALVSYRAANVPKDKEHPYGHGKFETLGALGISAMLLATGSGIAWHALDLLSIA 172

Query: 177 LSASPEVV 184
           LSA+PEV+
Sbjct: 173 LSAAPEVI 180

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.
Arabidopsis thaliana (taxid: 3702)

>sp|Q10LJ2|MTP2_ORYSJ Metal tolerance protein 2 OS=Oryza sativa subsp. japonica GN=MTP2 PE=2 SV=1

 Score =  168 bits (425), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/108 (75%), Positives = 97/108 (89%)

Query: 77  AENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKD 136
           +E IFRLGLA+DV L  GKA+TGYLSGSTAI ADAAHS+SD+VLS +AL SYKAAKAP+D
Sbjct: 76  SERIFRLGLAADVVLTVGKAVTGYLSGSTAIAADAAHSLSDIVLSGVALLSYKAAKAPRD 135

Query: 137 KEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLSASPEVV 184
           KEHPYGHGKFE+LGALGISSMLL TAGGIAWHA D+L  ++S++P+++
Sbjct: 136 KEHPYGHGKFESLGALGISSMLLVTAGGIAWHAFDVLQGVMSSAPDII 183

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q08970|MMT2_YEAST Mitochondrial metal transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT2 PE=1 SV=2

 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 61/101 (60%)

Query: 70  QQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYK 129
           QQ+       I  +GLAS+VG+A GK + G    S A++AD+ H++SD+V   + L+S +
Sbjct: 122 QQIKKNPGVRITWIGLASNVGMAVGKFVGGITFHSQALLADSVHALSDLVSDFLTLFSVQ 181

Query: 130 AAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHAL 170
            A      E+PYG+GK ET+G+L +S++L      I W +L
Sbjct: 182 YASRKPTSEYPYGYGKVETVGSLAVSTILAMAGISIGWSSL 222

Mitochondrial metal transporter involved in mitochondrial iron accumulation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q03218|MMT1_YEAST Mitochondrial metal transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT1 PE=1 SV=1

 Score = 67.8 bits (164), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 56/101 (55%)

Query: 70  QQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYK 129
           +Q+       I  +GL  +VG+A GK   G +  S A+ ADA H+ISD+V   + L S  
Sbjct: 153 EQIRKNAGVRITWVGLGVNVGIAIGKFFGGIVFHSQALFADAIHAISDMVSDLLTLLSVG 212

Query: 130 AAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHAL 170
            A      ++PYG+GK ET+G+L +S++L      I W +L
Sbjct: 213 LAANKPTADYPYGYGKIETVGSLAVSTILAMAGISIGWSSL 253

Mitochondrial metal transporter involved in mitochondrial iron accumulation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O59758|YJM3_SCHPO Uncharacterized metal transporter C1020.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.03 PE=3 SV=1

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 12/126 (9%)

Query: 64  HSHDHHQ-----------QLSGKDAE-NIFRLGLASDVGLAAGKALTGYLSGSTAIIADA 111
           H+HDH             +  GK  E  +  LGL S++GLAA K + G    S+ ++ADA
Sbjct: 48  HTHDHGSDKEMLELVKALKKEGKSPELKLAWLGLYSNIGLAAAKGIGGVALQSSILVADA 107

Query: 112 AHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALD 171
           AH + D +   + L + K       +++P G GK+ET+G   +S +L+A + GIA  +L 
Sbjct: 108 AHQLGDTLSDLVTLATLKICSKKPTQKYPAGFGKWETIGTFTVSGLLVAVSVGIAHSSLS 167

Query: 172 LLLDLL 177
            L  +L
Sbjct: 168 RLYTIL 173

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q57891|Y449_METJA Uncharacterized transporter MJ0449 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0449 PE=3 SV=1

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 43/75 (57%)

Query: 100 YLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLL 159
           Y+  S ++I+D  HS+SDV+ S I +   K A  P D+ HPYGH +FE L +  I   L 
Sbjct: 27  YVYSSISLISDGIHSLSDVITSIIGIIGVKIASKPPDESHPYGHSRFECLFSFFIGLALF 86

Query: 160 ATAGGIAWHALDLLL 174
            TA  I   A++ ++
Sbjct: 87  FTAYEIGKFAVERII 101

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

>sp|C0SP78|YDFM_BACSU Uncharacterized transporter YdfM OS=Bacillus subtilis (strain 168) GN=ydfM PE=3 SV=1

 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 4/103 (3%)

Query: 68  HHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWS 127
             +Q+S K A     + L +++ L AGK   G +  S A+ AD  HS +DVV S   L  
Sbjct: 4   EREQISRKVA----LIALIANLILMAGKVFFGLVGDSEAVFADGIHSAADVVASIAVLAV 59

Query: 128 YKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHAL 170
              +  P D++HP+GHGK E +    +  +L+  +  I   A+
Sbjct: 60  IGISNKPPDQDHPFGHGKAEVISEAIVGIILVIVSVYILIEAI 102

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|P46348|YEAB_BACSU Uncharacterized transporter YeaB OS=Bacillus subtilis (strain 168) GN=yeaB PE=3 SV=2

 Score = 51.6 bits (122), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 1/81 (1%)

Query: 83  LGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYG 142
           + +A+ + L+A K + GYL  S A+ AD  ++ +D++ S   L   + ++ P D++HPYG
Sbjct: 16  VSIAAYLVLSAIKLIIGYLFHSEALTADGLNNTTDIIASVAVLIGLRISQKPPDEDHPYG 75

Query: 143 HGKFETLGALGISSMLLATAG 163
           H + ET+ +L I+S ++   G
Sbjct: 76  HFRAETIASL-IASFIMMVVG 95

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|P32798|COT1_YEAST Cobalt uptake protein COT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COT1 PE=1 SV=2

 Score = 50.1 bits (118), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 98  TGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPK-DKEHPYGHGKFETLGALGISS 156
           TGYLS S A+IAD+ H ++D++   +ALW+   AK    D  + YG  + E LGAL  + 
Sbjct: 27  TGYLSHSLALIADSFHMLNDIISLVVALWAVNVAKNRNPDSTYTYGWKRAEILGALINAV 86

Query: 157 MLLATAGGIAWHALDLLLDLLSASPEVVRP 186
            L+A    I   AL  ++    A P +  P
Sbjct: 87  FLIALCVSILIEALQRII----APPVIENP 112

Probably responsible for the uptake of cobalt ions. It appears to act in a dosage-dependent manner to counteract the adverse effects of cobalt ions on cells. It may participate in the regulation of cobalt levels under normal physiological conditions and may be important in the supply of metal that is required for metalloenzyme or cofactor synthesis. It reduces the toxicity of cobalt and rhodium ions. Other components responsible for cobalt transport exist.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O13918|ZHF1_SCHPO Zinc homeostasis factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zhf1 PE=2 SV=3

 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 5/107 (4%)

Query: 83  LGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPK-DKEHPY 141
           L L  DV     + +TGY   S A+IAD+ H ++D+V   +ALW+ + A +   + ++ Y
Sbjct: 12  LLLGIDVTFFFIEIITGYAIDSLALIADSFHMLNDIVSLLVALWATRLAHSTSHEPKYTY 71

Query: 142 GHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLSASPEVVRPVL 188
           G  + E LGAL     L+A    I   A++  ++     P V  P L
Sbjct: 72  GWQRAEILGALSNGVFLIALCMFIFMEAIERFIE----PPSVSNPTL 114

Involved in zinc homeostasis, where it plays a role in its accumulation in the endoplasmic reticulum/nucleus. Also has a role in the sequestration of cadmium into the endoplasmic reticulum.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
449436799	500	PREDICTED: metal tolerance protein C1-li	0.952	0.362	0.614	5e-58
356500266	491	PREDICTED: metal tolerance protein C1-li	0.947	0.366	0.649	2e-56
356535392	490	PREDICTED: metal tolerance protein C1-li	0.947	0.367	0.638	5e-55
359479745	520	PREDICTED: metal tolerance protein C1 [V	0.947	0.346	0.610	6e-55
255636852	407	unknown [Glycine max]	0.947	0.442	0.638	9e-55
255559272	479	cation efflux protein/ zinc transporter,	0.873	0.346	0.605	3e-48
3738295	483	unknown protein [Arabidopsis thaliana]	0.657	0.258	0.742	1e-46
30690801	471	metal tolerance protein C1 [Arabidopsis	0.657	0.265	0.742	1e-46
30690804	468	metal tolerance protein C1 [Arabidopsis	0.657	0.267	0.742	1e-46
297828503	462	hypothetical protein ARALYDRAFT_322424 [	0.847	0.348	0.539	1e-44

>gi|449436799|ref|XP_004136180.1| PREDICTED: metal tolerance protein C1-like [Cucumis sativus] gi|449524166|ref|XP_004169094.1| PREDICTED: metal tolerance protein C1-like [Cucumis sativus]

 Score =  229 bits (583), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 121/197 (61%), Positives = 145/197 (73%), Gaps = 16/197 (8%)

Query: 1   MGFRFRNINSMCRTYITRVSSQSNNYYH--PIIQCQSLNFQFQ-----NHPSSVCSNQHY 53
           MG+RF  +N + +++ +R+S  ++  +H  P  Q  SL+ QF      + P S       
Sbjct: 1   MGYRFHRLNPILQSFYSRISPPTHKEFHSIPSFQSPSLHPQFTFLGIYDDPKS------- 53

Query: 54  LKIPIRWHLGHSHDHHQQLS-GKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAA 112
            KI  RWHLGHSH H      G++ ENIF+LGL +D+GLA GKA+TGYLSGSTAIIADAA
Sbjct: 54  -KICRRWHLGHSHRHDDDHRFGQEGENIFKLGLGADIGLAVGKAVTGYLSGSTAIIADAA 112

Query: 113 HSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDL 172
           HS+SDVVLS IALWS+KA KAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHA +L
Sbjct: 113 HSVSDVVLSGIALWSFKAGKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHASEL 172

Query: 173 LLDLLSASPEVVRPVLG 189
           LL LLSA+PE+V    G
Sbjct: 173 LLGLLSAAPEIVNQPFG 189

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500266|ref|XP_003518954.1| PREDICTED: metal tolerance protein C1-like [Glycine max]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/191 (64%), Positives = 146/191 (76%), Gaps = 11/191 (5%)

Query: 1   MGFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQH-YLKIPIR 59
           MGFR RN+N + RT ITR+SS  +N+  P+++  SLN    +HP   C  ++   KIP R
Sbjct: 1   MGFRVRNLNPVFRTCITRLSS--SNFLPPVLE--SLN----SHPLESCLTENPAFKIPRR 52

Query: 60  WHLGHSHDHHQQLSG--KDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISD 117
           WHLGHSH HH       K+ ENIFRLGLA+D+GLA GKA TGYLSGSTAIIADAAHS+SD
Sbjct: 53  WHLGHSHSHHDDRHHYHKEGENIFRLGLAADIGLATGKAFTGYLSGSTAIIADAAHSVSD 112

Query: 118 VVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLL 177
           VVLS IAL S+K AKAP+DKEHPYGHGKFETLGALGIS MLLAT GGIAWHA+D+L+ L 
Sbjct: 113 VVLSGIALLSFKVAKAPRDKEHPYGHGKFETLGALGISCMLLATGGGIAWHAVDILMGLF 172

Query: 178 SASPEVVRPVL 188
           S+ PE+V   L
Sbjct: 173 SSGPEMVSQAL 183

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535392|ref|XP_003536229.1| PREDICTED: metal tolerance protein C1-like [Glycine max]

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 122/191 (63%), Positives = 143/191 (74%), Gaps = 11/191 (5%)

Query: 1   MGFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQH-YLKIPIR 59
           MGFR RN+N + R  +TR SS  +N+  P+++  SLN    +HP   C  ++   KIP R
Sbjct: 1   MGFRVRNLNPIYRKCVTRFSS--SNFLPPVLE--SLN----SHPLESCLTENPAFKIPRR 52

Query: 60  WHLGHSHDHHQQLSG--KDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISD 117
           WHLGHSH HH       K+ E IFRLGLA+D+GLA GKA TGYLSGSTAIIADAAHS+SD
Sbjct: 53  WHLGHSHSHHDDRHHYHKEGEKIFRLGLAADIGLATGKAFTGYLSGSTAIIADAAHSVSD 112

Query: 118 VVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLL 177
           VVLS IAL S+K AKAP+DKEHPYGHGKFETLGALGIS MLLAT GGIAWHA+D+L+ L 
Sbjct: 113 VVLSGIALLSFKVAKAPRDKEHPYGHGKFETLGALGISCMLLATGGGIAWHAVDILMGLF 172

Query: 178 SASPEVVRPVL 188
           S+ PEVV   L
Sbjct: 173 SSGPEVVSQTL 183

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359479745|ref|XP_002269478.2| PREDICTED: metal tolerance protein C1 [Vitis vinifera] gi|296086610|emb|CBI32245.3| unnamed protein product [Vitis vinifera]

 Score =  219 bits (557), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 119/195 (61%), Positives = 148/195 (75%), Gaps = 15/195 (7%)

Query: 1   MGFRFRNINSMCRTYITRVSS-------QSNNYYHPIIQCQSLNFQFQNH-PSSVCSNQH 52
           MGFRF+N+NS+ +T ++R+SS       Q+ N+ +P  +    +F  Q++ PSS+  +  
Sbjct: 1   MGFRFQNLNSIHKTLVSRISSHTHGTLLQTPNFPNPTTR----SFIPQSYDPSSIFPHNP 56

Query: 53  YLKIPIRWHLGHSHDHHQQLSG---KDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIA 109
             ++P RWH GHSH+HH        +  E+IFRLGL +D+GL  GK LTGYLSGSTAIIA
Sbjct: 57  IFRVPRRWHFGHSHNHHDHQHHHSSEVGESIFRLGLFADIGLVTGKTLTGYLSGSTAIIA 116

Query: 110 DAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHA 169
           DAAHS SDVVLS +ALWSYK AKAPKDKEHPYGHGKFETLGALGIS MLLATAGGIAWHA
Sbjct: 117 DAAHSASDVVLSGVALWSYKVAKAPKDKEHPYGHGKFETLGALGISCMLLATAGGIAWHA 176

Query: 170 LDLLLDLLSASPEVV 184
           +D+LL +LSA+PEV+
Sbjct: 177 VDVLLGVLSAAPEVI 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255636852|gb|ACU18759.1| unknown [Glycine max]

 Score =  218 bits (555), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 122/191 (63%), Positives = 143/191 (74%), Gaps = 11/191 (5%)

Query: 1   MGFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQH-YLKIPIR 59
           MGFR RN+N + R  +TR SS  +N+  P+++  SLN    +HP   C  ++   KIP R
Sbjct: 1   MGFRVRNLNPIYRKCVTRFSS--SNFLPPVLE--SLN----SHPLESCLTENPAFKIPRR 52

Query: 60  WHLGHSHDHHQQLSG--KDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISD 117
           WHLGHSH HH       K+ E IFRLGLA+D+GLA GKA TGYLSGSTAIIADAAHS+SD
Sbjct: 53  WHLGHSHSHHDDRHHYHKEGEKIFRLGLAADIGLATGKAFTGYLSGSTAIIADAAHSVSD 112

Query: 118 VVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLL 177
           VVLS IAL S+K AKAP+DKEHPYGHGKFETLGALGIS MLLAT GGIAWHA+D+L+ L 
Sbjct: 113 VVLSGIALLSFKVAKAPRDKEHPYGHGKFETLGALGISCMLLATGGGIAWHAVDILMGLF 172

Query: 178 SASPEVVRPVL 188
           S+ PEVV   L
Sbjct: 173 SSGPEVVSQTL 183

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559272|ref|XP_002520656.1| cation efflux protein/ zinc transporter, putative [Ricinus communis] gi|223540041|gb|EEF41618.1| cation efflux protein/ zinc transporter, putative [Ricinus communis]

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/190 (60%), Positives = 132/190 (69%), Gaps = 24/190 (12%)

Query: 1   MGFRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRW 60
           MGFR    +++  T  +R         H  +  QSLN    +  S+        + P RW
Sbjct: 1   MGFRILCKSNLLATLSSR---------HKTLLIQSLNSHLLDSSST--------RTPKRW 43

Query: 61  HLGHSHDHHQQL-------SGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAH 113
           H GHSH H           SG+  ENIFRLGLA+D+GLAAGK LTGYLSGSTAIIADAAH
Sbjct: 44  HFGHSHSHSDHHHRHNHPASGEKGENIFRLGLAADIGLAAGKTLTGYLSGSTAIIADAAH 103

Query: 114 SISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLL 173
           S+SDVVLS +ALWS+KA  AP+DKEHPYGHGKFE+LGALGIS MLLATAGGIAWHALDLL
Sbjct: 104 SVSDVVLSGVALWSFKAGNAPRDKEHPYGHGKFESLGALGISCMLLATAGGIAWHALDLL 163

Query: 174 LDLLSASPEV 183
           + LLSASPEV
Sbjct: 164 IGLLSASPEV 173

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3738295|gb|AAC63637.1| unknown protein [Arabidopsis thaliana]

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/128 (74%), Positives = 106/128 (82%), Gaps = 3/128 (2%)

Query: 59  RWHLGHSHDHHQQLS--GKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSIS 116
           RWH GH  DHHQQ    G++ E IFRLGL +D+GL+  KALTGYL GSTAIIADAAHS+S
Sbjct: 54  RWHFGHP-DHHQQYQKPGEEGEKIFRLGLTADIGLSVAKALTGYLCGSTAIIADAAHSVS 112

Query: 117 DVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDL 176
           DVVLS +AL SY+AA  PKDKEHPYGHGKFETLGALGIS+MLLAT  GIAWHALDLL   
Sbjct: 113 DVVLSGVALVSYRAANVPKDKEHPYGHGKFETLGALGISAMLLATGSGIAWHALDLLSIA 172

Query: 177 LSASPEVV 184
           LSA+PEV+
Sbjct: 173 LSAAPEVI 180

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30690801|ref|NP_182304.2| metal tolerance protein C1 [Arabidopsis thaliana] gi|71151963|sp|Q8L725.1|MTPC1_ARATH RecName: Full=Metal tolerance protein C1; Short=AtMTPc1; AltName: Full=AtMTP6 gi|22655099|gb|AAM98140.1| unknown protein [Arabidopsis thaliana] gi|30387579|gb|AAP31955.1| At2g47830 [Arabidopsis thaliana] gi|330255799|gb|AEC10893.1| metal tolerance protein C1 [Arabidopsis thaliana]

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/128 (74%), Positives = 106/128 (82%), Gaps = 3/128 (2%)

Query: 59  RWHLGHSHDHHQQLS--GKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSIS 116
           RWH GH  DHHQQ    G++ E IFRLGL +D+GL+  KALTGYL GSTAIIADAAHS+S
Sbjct: 54  RWHFGHP-DHHQQYQKPGEEGEKIFRLGLTADIGLSVAKALTGYLCGSTAIIADAAHSVS 112

Query: 117 DVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDL 176
           DVVLS +AL SY+AA  PKDKEHPYGHGKFETLGALGIS+MLLAT  GIAWHALDLL   
Sbjct: 113 DVVLSGVALVSYRAANVPKDKEHPYGHGKFETLGALGISAMLLATGSGIAWHALDLLSIA 172

Query: 177 LSASPEVV 184
           LSA+PEV+
Sbjct: 173 LSAAPEVI 180

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30690804|ref|NP_850480.1| metal tolerance protein C1 [Arabidopsis thaliana] gi|330255800|gb|AEC10894.1| metal tolerance protein C1 [Arabidopsis thaliana]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/128 (74%), Positives = 106/128 (82%), Gaps = 3/128 (2%)

Query: 59  RWHLGHSHDHHQQLS--GKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSIS 116
           RWH GH  DHHQQ    G++ E IFRLGL +D+GL+  KALTGYL GSTAIIADAAHS+S
Sbjct: 54  RWHFGHP-DHHQQYQKPGEEGEKIFRLGLTADIGLSVAKALTGYLCGSTAIIADAAHSVS 112

Query: 117 DVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDL 176
           DVVLS +AL SY+AA  PKDKEHPYGHGKFETLGALGIS+MLLAT  GIAWHALDLL   
Sbjct: 113 DVVLSGVALVSYRAANVPKDKEHPYGHGKFETLGALGISAMLLATGSGIAWHALDLLSIA 172

Query: 177 LSASPEVV 184
           LSA+PEV+
Sbjct: 173 LSAAPEVI 180

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297828503|ref|XP_002882134.1| hypothetical protein ARALYDRAFT_322424 [Arabidopsis lyrata subsp. lyrata] gi|297327973|gb|EFH58393.1| hypothetical protein ARALYDRAFT_322424 [Arabidopsis lyrata subsp. lyrata]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/189 (53%), Positives = 120/189 (63%), Gaps = 28/189 (14%)

Query: 1   MGFRFRNINS--MCRTYITRVSSQSNNYYHPII---QCQSLNFQFQNHPSSVCSNQHYLK 55
           MG RF+ +N    CR+ +       ++         Q  S +F F               
Sbjct: 1   MGIRFQMVNPRICCRSRLLSCRDLPSSPLRLSSSSSQNPSFDFDFSR------------- 47

Query: 56  IPIRWHLGHSHDHHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSI 115
              RWH GH       L G++ E IFRLGL +D+GL+  KALTGYL GSTAIIADAAHS+
Sbjct: 48  ---RWHFGH-------LPGEEGEKIFRLGLTADIGLSVAKALTGYLCGSTAIIADAAHSV 97

Query: 116 SDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLD 175
           SDVVLS +AL SY+AA  PKDKEHPYGHGKFETLGALGIS+MLLAT  GIAWHALDLL  
Sbjct: 98  SDVVLSGVALVSYRAANVPKDKEHPYGHGKFETLGALGISAMLLATGSGIAWHALDLLSI 157

Query: 176 LLSASPEVV 184
            LSA+PEV+
Sbjct: 158 ALSAAPEVL 166

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	190
TAIR|locus:2043328	471	AT2G47830 [Arabidopsis thalian	0.910	0.367	0.478	1e-36
SGD|S000006145	484	MMT2 "Putative metal transport	0.542	0.212	0.342	4.5e-09
TIGR_CMR|BA_4640	298	BA_4640 "cation efflux family	0.463	0.295	0.359	7.5e-09
ASPGD|ASPL0000075823	490	AN8791 [Emericella nidulans (t	0.552	0.214	0.313	1.6e-08
SGD|S000004789	510	MMT1 "Putative metal transport	0.547	0.203	0.318	5.5e-07
POMBASE|SPCC1020.03	397	SPCC1020.03 "mitochondrial iro	0.484	0.231	0.336	2.2e-05
TIGR_CMR|DET_0331	311	DET_0331 "cation efflux family	0.405	0.247	0.320	2.2e-05
TIGR_CMR|BA_2310	296	BA_2310 "cation efflux family	0.478	0.307	0.260	0.00023
TIGR_CMR|CHY_0502	303	CHY_0502 "cation efflux family	0.405	0.254	0.307	0.00085

TAIR|locus:2043328 AT2G47830 [Arabidopsis thaliana (taxid:3702)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 88/184 (47%), Positives = 104/184 (56%)

Query:     3 FRFRNINSMCRTYITRVSSQSNNYYHPIIQCQSLNFQFQNHPSSVCSNQHYLKIPIRWHL 62
             F+  N   +CR+ I  +S +    Y P     S   +     SS  S +       RWH 
Sbjct:     6 FQILNPTRICRSTIYYMSCR----YLPSSSSSSSPLRV----SSSSSQKPSFDFSRRWHF 57

Query:    63 GHSHDHHQQLS--GKDAENIFRLGLASDVGLAAGKALTGYLSGSTXXXXXXXXXXXXVVL 120
             GH  DHHQQ    G++ E IFRLGL +D+GL+  KALTGYL GST            VVL
Sbjct:    58 GHP-DHHQQYQKPGEEGEKIFRLGLTADIGLSVAKALTGYLCGSTAIIADAAHSVSDVVL 116

Query:   121 SSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHXXXXXXXXXXXX 180
             S +AL SY+AA  PKDKEHPYGHGKFETLGALGIS+MLLAT  GIAWH            
Sbjct:   117 SGVALVSYRAANVPKDKEHPYGHGKFETLGALGISAMLLATGSGIAWHALDLLSIALSAA 176

Query:   181 PEVV 184
             PEV+
Sbjct:   177 PEVI 180

GO:0006812 "cation transport" evidence=IEA;ISS

GO:0008324 "cation transmembrane transporter activity" evidence=IEA;ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

SGD|S000006145 MMT2 "Putative metal transporter involved in mitochondrial iron accumulation" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 143 (55.4 bits), Expect = 4.5e-09, P = 4.5e-09
 Identities = 38/111 (34%), Positives = 55/111 (49%)

Query:    64 HSHDHH------QQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTXXXXXXXXXXXX 117
             H HD+       QQ+       I  +GLAS+VG+A GK + G    S             
Sbjct:   110 HMHDNPLLSLNVQQIKKNPGVRITWIGLASNVGMAVGKFVGGITFHSQALLADSVHALSD 169

Query:   118 VVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAG-GIAW 167
             +V   + L+S + A      E+PYG+GK ET+G+L +S+ +LA AG  I W
Sbjct:   170 LVSDFLTLFSVQYASRKPTSEYPYGYGKVETVGSLAVST-ILAMAGISIGW 219

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA;IGI;IMP

GO:0006810 "transport" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=ISM;IEA;ISS

GO:0055072 "iron ion homeostasis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0055085 "transmembrane transport" evidence=IEA

TIGR_CMR|BA_4640 BA_4640 "cation efflux family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 137 (53.3 bits), Expect = 7.5e-09, P = 7.5e-09
 Identities = 32/89 (35%), Positives = 48/89 (53%)

Query:    75 KDAENIFRLGLASDVGLAAGKALTGYLSGSTXXXXXXXXXXXXVVLSSIALWSYKAAKAP 134
             K AE    +G+  ++ LA  KA+ GY+  S             V+ S   L+  +AAK P
Sbjct:     9 KQAEFGAIVGIVGNIILAIIKAVIGYIGNSKALLADAVHSASDVIGSLAVLFGLRAAKQP 68

Query:   135 KDKEHPYGHGKFETLGALGISSMLLATAG 163
              D++HPYGHGK E++ A+ I ++LL   G
Sbjct:    69 PDEDHPYGHGKAESISAI-IVAVLLFIVG 96

GO:0006812 "cation transport" evidence=ISS

GO:0008324 "cation transmembrane transporter activity" evidence=ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

ASPGD|ASPL0000075823 AN8791 [Emericella nidulans (taxid:162425)]

 Score = 138 (53.6 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 37/118 (31%), Positives = 57/118 (48%)

Query:    59 RWHLGHSHDHHQQ-------LSGKDAEN----IFRLGLASDVGLAAGKALTGYLSGSTXX 107
             R H GH H HH         L+  +  +    I RLGL +++ +A GK + GY+  S   
Sbjct:   108 REHGGHGHHHHHHHHHGNAYLTSTNKHDAGVRITRLGLVANLAMAIGKFIGGYVFHSQAL 167

Query:   108 XXXXXXXXXXVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGI 165
                       +V   + L +   +  P  +  P G+GK E++GALG+S +LLA  GG+
Sbjct:   168 IADAYHALTDLVSDFLTLGTVAWSLKPPSERFPNGYGKIESIGALGVSGLLLA--GGV 223

GO:0005739 "mitochondrion" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

SGD|S000004789 MMT1 "Putative metal transporter involved in mitochondrial iron accumulation" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 124 (48.7 bits), Expect = 5.5e-07, P = 5.5e-07
 Identities = 37/116 (31%), Positives = 53/116 (45%)

Query:    63 GHSHDH--HQQLSGKDAENIFR--------LGLASDVGLAAGKALTGYLSGSTXXXXXXX 112
             GH+H H  H  L     E I +        +GL  +VG+A GK   G +  S        
Sbjct:   136 GHTHSHAAHNPLLVLSTEQIRKNAGVRITWVGLGVNVGIAIGKFFGGIVFHSQALFADAI 195

Query:   113 XXXXXVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAG-GIAW 167
                  +V   + L S   A      ++PYG+GK ET+G+L +S+ +LA AG  I W
Sbjct:   196 HAISDMVSDLLTLLSVGLAANKPTADYPYGYGKIETVGSLAVST-ILAMAGISIGW 250

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA;IGI;IMP

GO:0016021 "integral to membrane" evidence=ISM;IEA;ISS

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0003674 "molecular_function" evidence=ND

GO:0055085 "transmembrane transport" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0055072 "iron ion homeostasis" evidence=IEA

POMBASE|SPCC1020.03 SPCC1020.03 "mitochondrial iron ion transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 116 (45.9 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 32/95 (33%), Positives = 48/95 (50%)

Query:    74 GKDAE-NIFRLGLASDVGLAAGKALTGYLSGSTXXXXXXXXXXXXVVLSSIALWSYK-AA 131
             GK  E  +  LGL S++GLAA K + G    S+             +   + L + K  +
Sbjct:    69 GKSPELKLAWLGLYSNIGLAAAKGIGGVALQSSILVADAAHQLGDTLSDLVTLATLKICS 128

Query:   132 KAPKDKEHPYGHGKFETLGALGISSMLLATAGGIA 166
             K P  K +P G GK+ET+G   +S +L+A + GIA
Sbjct:   129 KKPTQK-YPAGFGKWETIGTFTVSGLLVAVSVGIA 162

GO:0005381 "iron ion transmembrane transporter activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS

GO:0006880 "intracellular sequestering of iron ion" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0048250 "mitochondrial iron ion transport" evidence=ISS

GO:0055085 "transmembrane transport" evidence=IEA

TIGR_CMR|DET_0331 DET_0331 "cation efflux family protein" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 115 (45.5 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 25/78 (32%), Positives = 40/78 (51%)

Query:    85 LASDVGLAAGKALTGYLSGSTXXXXXXXXXXXXVVLSSIALWSYKAAKAPKDKEHPYGHG 144
             +AS+  L   KA  G+++GS             +V + IA +  KA+  P D  HPYGHG
Sbjct:    13 IASNSTLIVMKAAVGFVTGSVSILAEAIHSTLDLVAAVIAFFGVKASDKPADATHPYGHG 72

Query:   145 KFETLGALGISSMLLATA 162
             K+E +    + ++L+  A
Sbjct:    73 KWENVSGT-VEAVLIFVA 89

GO:0006812 "cation transport" evidence=ISS

GO:0008324 "cation transmembrane transporter activity" evidence=ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

TIGR_CMR|BA_2310 BA_2310 "cation efflux family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 108 (43.1 bits), Expect = 0.00023, P = 0.00023
 Identities = 24/92 (26%), Positives = 48/92 (52%)

Query:    72 LSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTXXXXXXXXXXXXVVLSSIALWSYKAA 131
             LS K+A+    + + + + L++ K +  Y++ S+            +  S   L   K +
Sbjct:     7 LSNKEADKGAIVSILAYIFLSSMKIIISYITLSSALRADGLNNLTDIGASLAILIGLKIS 66

Query:   132 KAPKDKEHPYGHGKFETLGALGISSMLLATAG 163
             + P+D +HPYGH + E + +L ++S ++AT G
Sbjct:    67 RKPRDPDHPYGHSRAEQIASL-VASFIMATVG 97

GO:0006812 "cation transport" evidence=ISS

GO:0008324 "cation transmembrane transporter activity" evidence=ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

TIGR_CMR|CHY_0502 CHY_0502 "cation efflux family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 104 (41.7 bits), Expect = 0.00085, P = 0.00085
 Identities = 24/78 (30%), Positives = 35/78 (44%)

Query:    82 RLGLASDVGLAAGKALTGYLSGSTXXXXXXXXXXXXVVLSSIALWSYKAAKAPKDKEHPY 141
             +L + S+  L   K + G  +GS             ++ S I  +S K A  P D  HPY
Sbjct:    10 KLSIISNTLLVLFKIVVGLFTGSVSIIAEGLHSGVDLLASIITFFSVKVASRPADVRHPY 69

Query:   142 GHGKFETLGALGISSMLL 159
             GHGK E +    I  +L+
Sbjct:    70 GHGKVENIAGT-IEGLLI 86


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      190       166   0.00097  107 3  11 22  0.37    32
                                                     30  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  169 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.14u 0.14s 13.28t   Elapsed:  00:00:01
  Total cpu time:  13.14u 0.14s 13.28t   Elapsed:  00:00:01
  Start:  Sat May 11 06:03:37 2013   End:  Sat May 11 06:03:38 2013

GO:0006812 "cation transport" evidence=ISS

GO:0008324 "cation transmembrane transporter activity" evidence=ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8L725	MTPC1_ARATH	No assigned EC number	0.7421	0.6578	0.2653	yes	no
Q10LJ2	MTP2_ORYSJ	No assigned EC number	0.75	0.5684	0.2776	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	190
COG0053	304	COG0053, MMT1, Predicted Co/Zn/Cd cation transport	3e-29
TIGR01297	268	TIGR01297, CDF, cation diffusion facilitator famil	3e-27
pfam01545	273	pfam01545, Cation_efflux, Cation efflux family	3e-21
COG1230	296	COG1230, CzcD, Co/Zn/Cd efflux system component [I	4e-15
COG3965	314	COG3965, COG3965, Predicted Co/Zn/Cd cation transp	4e-07
PRK03557	312	PRK03557, PRK03557, zinc transporter ZitB; Provisi	1e-06
COG0053	304	COG0053, MMT1, Predicted Co/Zn/Cd cation transport	1e-05
PRK09509	299	PRK09509, fieF, ferrous iron efflux protein F; Rev	5e-05
pfam01545	273	pfam01545, Cation_efflux, Cation efflux family	0.003

>gnl|CDD|223131 COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

 Score =  109 bits (274), Expect = 3e-29
 Identities = 40/100 (40%), Positives = 59/100 (59%)

Query: 75  KDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAP 134
           K       + LA ++ LA  K + G L+GS A++ADA HS+SD+V S I L   + +  P
Sbjct: 9   KLVRRAALISLAVNLALALLKLIAGILTGSVALLADAIHSLSDIVASLIVLIGLRISSKP 68

Query: 135 KDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLL 174
            D++HPYGHGK ETL +L +S ++ A    I   A+  L+
Sbjct: 69  PDRDHPYGHGKAETLASLIVSILIFAAGFEILLEAIKRLI 108

Length = 304

>gnl|CDD|233348 TIGR01297, CDF, cation diffusion facilitator family transporter

 Score =  103 bits (258), Expect = 3e-27
 Identities = 36/86 (41%), Positives = 54/86 (62%)

Query: 90  GLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETL 149
            L   K + G LSGS A++ADA HS+SDV  S+IAL + + ++ P D+ HP+GHG+ E L
Sbjct: 1   LLMLIKIVGGLLSGSLALLADAIHSLSDVAASAIALLALRISRRPADERHPFGHGRAEIL 60

Query: 150 GALGISSMLLATAGGIAWHALDLLLD 175
            AL     L+  A  I + A++ L++
Sbjct: 61  AALLNGLFLVVVALFILYEAIERLIN 86

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence [Transport and binding proteins, Cations and iron carrying compounds]. Length = 268

>gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family

 Score = 87.4 bits (217), Expect = 3e-21
 Identities = 34/85 (40%), Positives = 53/85 (62%)

Query: 90  GLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETL 149
            LA  K   G L+GS A++ADA HS+ D++ S +AL + + +  P DK HP+GHG+ E L
Sbjct: 1   LLALVKLAAGLLTGSLALLADALHSLIDLLSSLLALLALRLSSRPPDKRHPFGHGRLEPL 60

Query: 150 GALGISSMLLATAGGIAWHALDLLL 174
            AL +S +LL     I + +++ L+
Sbjct: 61  AALIVSLLLLGVGVFILYESIERLI 85

Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are thought to be efflux pumps that remove these ions from cells. Length = 273

>gnl|CDD|224151 COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]

 Score = 71.2 bits (175), Expect = 4e-15
 Identities = 31/110 (28%), Positives = 52/110 (47%)

Query: 61  HLGHSHDHHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVL 120
              HSH H         E    + L  ++     + + G L+GS A++ADA H +SD + 
Sbjct: 4   AAHHSHGHDHAHDNPRNERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALA 63

Query: 121 SSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHAL 170
             +AL + K A+ P  K   +G+ + E L A   + +L+  +  I W A+
Sbjct: 64  LLLALIAIKLARRPATKRFTFGYKRLEILAAFLNALLLIVVSLLILWEAI 113

Length = 296

>gnl|CDD|226474 COG3965, COG3965, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 6/107 (5%)

Query: 80  IFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALW-SYKAAKAPKDKE 138
             R+ +A  V  AA   + G LSGS +II D  +S+ D  ++ ++L  S   AK P+D  
Sbjct: 21  YLRISIAGTVIFAAFGIIWGLLSGSMSIIFDGVYSLIDAGMTLLSLLVSRLIAKDPRDAR 80

Query: 139 HPYGHGKFETLGALGISSMLLATAGGIAWHAL-DLLLDLLSASPEVV 184
            PYG    E L  L I+  LLA    +  +AL + L  LL    EV 
Sbjct: 81  FPYGFWHLEPL-VLAINGTLLA---LLCLYALINALGSLLDGGREVE 123

Length = 314

>gnl|CDD|235130 PRK03557, PRK03557, zinc transporter ZitB; Provisional

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 62  LGHSHDHHQQLSGKDAENIFRLGLASDV--GLAAGKALTGYLSGSTAIIADAAHSISDVV 119
           + HSH H      +D  N  RL  A  V  G    + + G+LSGS A++ADA H ++D  
Sbjct: 1   MAHSHSHTSSHLPEDN-NARRLLYAFGVTAGFMLVEVIGGFLSGSLALLADAGHMLTDAA 59

Query: 120 LSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHAL 170
               AL + + ++ P    H +G  +  TL A   +  L+     I W A+
Sbjct: 60  ALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVITILIVWEAI 110

Length = 312

>gnl|CDD|223131 COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 9/86 (10%)

Query: 102 SGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLAT 161
           + S A+IADA H  SDV+ S   L     +          G    + L AL IS  +L T
Sbjct: 144 TNSQALIADALHHRSDVLTSLAVLVGLLGSL--------LGWPWLDPLAALLISLYILKT 195

Query: 162 AGGIAWHALDLLLDLLSASPEVVRPV 187
              +   +++ L+D  +  PE +  +
Sbjct: 196 GFRLFKESVNELMD-AALDPEDLEKI 220

Length = 304

>gnl|CDD|181919 PRK09509, fieF, ferrous iron efflux protein F; Reviewed

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 10/98 (10%)

Query: 95  KALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGI 154
           K    + +GS +++A    S+ D+  S   L   + +  P D EH +GHGK E+L AL  
Sbjct: 27  KIFAWWYTGSVSLLAALVDSLVDIAASLTNLLVVRYSLQPADDEHTFGHGKAESLAALA- 85

Query: 155 SSMLLATAGGIAWHALDLLLDLLS--ASPEVVR-PVLG 189
            SM       I+  AL L L  +    SP  +  P +G
Sbjct: 86  QSMF------ISGSALFLFLTGIQHLISPTPMNDPGVG 117

Length = 299

>gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family

 Score = 36.9 bits (86), Expect = 0.003
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 8/84 (9%)

Query: 104 STAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAG 163
           S+A+ ADA H++ DV+ S   L                G    + L +L I+ ++L T  
Sbjct: 124 SSALRADALHALVDVLGSLAVLIGLLLI-------LLTGLPIADPLASLLIALLILYTGL 176

Query: 164 GIAWHALDLLLDLLSASPEVVRPV 187
            +   +L  LL   S  PE+V  +
Sbjct: 177 RLLKESLSELLG-ASPDPELVDEI 199

Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are thought to be efflux pumps that remove these ions from cells. Length = 273

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	190
PRK03557	312	zinc transporter ZitB; Provisional	99.91
COG1230	296	CzcD Co/Zn/Cd efflux system component [Inorganic i	99.9
COG0053	304	MMT1 Predicted Co/Zn/Cd cation transporters [Inorg	99.89
PRK09509	299	fieF ferrous iron efflux protein F; Reviewed	99.87
KOG1485	412	consensus Mitochondrial Fe2+ transporter MMT1 and	99.81
TIGR01297	268	CDF cation diffusion facilitator family transporte	99.77
KOG1484	354	consensus Putative Zn2+ transporter MSC2 (cation d	99.71
PF01545	284	Cation_efflux: Cation efflux family; InterPro: IPR	99.69
KOG1483	404	consensus Zn2+ transporter ZNT1 and related Cd2+/Z	99.63
KOG1482	379	consensus Zn2+ transporter [Inorganic ion transpor	99.63
KOG2802	503	consensus Membrane protein HUEL (cation efflux sup	99.42
COG3965	314	Predicted Co/Zn/Cd cation transporters [Inorganic	99.31
COG0053	304	MMT1 Predicted Co/Zn/Cd cation transporters [Inorg	99.28
PRK09509	299	fieF ferrous iron efflux protein F; Reviewed	99.04
TIGR01297	268	CDF cation diffusion facilitator family transporte	99.03
PRK03557	312	zinc transporter ZitB; Provisional	98.7
KOG1485	412	consensus Mitochondrial Fe2+ transporter MMT1 and	98.57
PF01545	284	Cation_efflux: Cation efflux family; InterPro: IPR	97.59
COG1230	296	CzcD Co/Zn/Cd efflux system component [Inorganic i	97.46
KOG1484	354	consensus Putative Zn2+ transporter MSC2 (cation d	95.41
KOG1482	379	consensus Zn2+ transporter [Inorganic ion transpor	87.46

>PRK03557 zinc transporter ZitB; Provisional

Probab=99.91  E-value=1.8e-23  Score=181.59  Aligned_cols=104  Identities=23%  Similarity=0.360  Sum_probs=99.1

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHH
Q 029655           74 GKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALG  153 (190)
Q Consensus        74 ~~~~~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali  153 (190)
                      ++..+|.+++++++|+++++.|+++|+.+||.+|++||+|++.|++++++.++++++++||+|++|||||+|+|++++++
T Consensus        14 ~~~~~r~~~~~~~~n~~l~i~k~~~g~~tgS~AllaDa~hsl~D~~~~~~~l~a~~~s~kp~d~~hpyG~~r~E~l~al~   93 (312)
T PRK03557         14 EDNNARRLLYAFGVTAGFMLVEVIGGFLSGSLALLADAGHMLTDAAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFV   93 (312)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHH
Confidence            33357889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc
Q 029655          154 ISSMLLATAGGIAWHALDLLLDLL  177 (190)
Q Consensus       154 ~sv~li~~~~~ii~eav~~Ll~~~  177 (190)
                      ++++|++++++++++++++++++.
T Consensus        94 ~~~~l~~~~~~i~~eai~~l~~~~  117 (312)
T PRK03557         94 NAIALVVITILIVWEAIERFRTPR  117 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCc
Confidence            999999999999999999998764

>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]

Probab=99.90  E-value=3.2e-23  Score=178.32  Aligned_cols=115  Identities=29%  Similarity=0.411  Sum_probs=105.4

Q ss_pred             cCCCCCCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 029655           62 LGHSHDHHQQLSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPY  141 (190)
Q Consensus        62 ~~h~h~~~~~~~~~~~~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~  141 (190)
                      ++|+|+|.  ....+.+|.+++++++|+.++++|+++|+.+||++|+||++|+++|+++.++.++++++++|+++.+|||
T Consensus         7 ~~h~h~~~--~~~~~~~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~a~r~~~~~~Tf   84 (296)
T COG1230           7 HSHGHDHA--HDNPRNERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKLARRPATKRFTF   84 (296)
T ss_pred             hccCCccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence            44444443  3456678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 029655          142 GHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLS  178 (190)
Q Consensus       142 G~~r~E~l~ali~sv~li~~~~~ii~eav~~Ll~~~~  178 (190)
                      ||.|+|.+++++++++|+..++++++|+++|+.+|..
T Consensus        85 Gy~R~eiLaa~~nav~Li~~s~~I~~EAi~R~~~P~~  121 (296)
T COG1230          85 GYKRLEILAAFLNALLLIVVSLLILWEAIQRLLAPPP  121 (296)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999999999997653

>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

Probab=99.89  E-value=7.3e-23  Score=177.50  Aligned_cols=113  Identities=36%  Similarity=0.518  Sum_probs=106.1

Q ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH
Q 029655           72 LSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGA  151 (190)
Q Consensus        72 ~~~~~~~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~a  151 (190)
                      ++.+..+|+.++++++|+++++.|+++|+.+||.||+||++|+++|++++++.++++++++||+|++|||||+|+|++++
T Consensus         6 ~~~~~~~~~~~~sl~~nl~l~~~K~~~g~~~gS~ALlADaihs~~D~~~si~~l~~l~~s~kp~d~~HpyGh~k~E~l~s   85 (304)
T COG0053           6 ERLKLVRRAALISLAVNLALALLKLIAGILTGSVALLADAIHSLSDIVASLIVLIGLRISSKPPDRDHPYGHGKAETLAS   85 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHH
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 029655          152 LGISSMLLATAGGIAWHALDLLLDLLSASPEVV  184 (190)
Q Consensus       152 li~sv~li~~~~~ii~eav~~Ll~~~~~~p~~~  184 (190)
                      ++.+++|+++|+.++++++.+++.+...++..+
T Consensus        86 l~~~~~i~~~g~~i~~~a~~~~~~~~~~~~~~~  118 (304)
T COG0053          86 LIVSILIFAAGFEILLEAIKRLISPQPVEPPLL  118 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHH
Confidence            999999999999999999999998655554443

>PRK09509 fieF ferrous iron efflux protein F; Reviewed

Probab=99.87  E-value=1.2e-21  Score=169.12  Aligned_cols=106  Identities=24%  Similarity=0.266  Sum_probs=100.9

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHH
Q 029655           75 KDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGI  154 (190)
Q Consensus        75 ~~~~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~  154 (190)
                      +..+|+.++++++|+++++.|+++|+.+||.+|+||++|++.|+++.++++++.++++|++|++|||||+|+|+++++++
T Consensus         7 ~~~~~~~~~~~~~n~~l~i~k~~~g~~sgS~allaDa~hsl~D~~~~~l~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~   86 (299)
T PRK09509          7 RLVSRAAIAATAMASLLLLIKIFAWWYTGSVSLLAALVDSLVDIAASLTNLLVVRYSLQPADDEHTFGHGKAESLAALAQ   86 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHH
Confidence            35679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCC
Q 029655          155 SSMLLATAGGIAWHALDLLLDLLSAS  180 (190)
Q Consensus       155 sv~li~~~~~ii~eav~~Ll~~~~~~  180 (190)
                      +++|++.+++++++++++++++...+
T Consensus        87 ~~~l~~~~~~~~~esi~~l~~~~~~~  112 (299)
T PRK09509         87 SMFISGSALFLFLTGIQHLISPTPMN  112 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999999999765433

>KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=99.81  E-value=1.1e-19  Score=161.15  Aligned_cols=103  Identities=37%  Similarity=0.585  Sum_probs=99.5

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHH
Q 029655           73 SGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGAL  152 (190)
Q Consensus        73 ~~~~~~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~al  152 (190)
                      ..+.++++.|+++++|++++++|.++++.+||++++||++|++.|+++.++.++++++++++++.+||+|++|+|+++.+
T Consensus       109 ~~~~~~~~~~i~l~~Nigl~vaK~~as~~sgS~aIiAsavdSl~Dl~s~fvll~s~~~~~k~~~~~YP~G~~r~EtvG~i  188 (412)
T KOG1485|consen  109 LKNAERRAAWIGLAANIGLAVAKVVASYLSGSMAIIASAVDSLSDLVSGFVLLFSLRAAKKKPTYEYPRGRGRVETVGLI  188 (412)
T ss_pred             hhcHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhCCCCCCcccchhHH
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Q 029655          153 GISSMLLATAGGIAWHALDLLLD  175 (190)
Q Consensus       153 i~sv~li~~~~~ii~eav~~Ll~  175 (190)
                      +++++|...+++++++++..+.+
T Consensus       189 ~~S~iMa~agv~ii~sSl~~i~~  211 (412)
T KOG1485|consen  189 AVSVIMAMAGVQIIWSSLRLIVG  211 (412)
T ss_pred             HHHHHHHHHHHHHHHHhHHhhhc
Confidence            99999999999999999999987

>TIGR01297 CDF cation diffusion facilitator family transporter

Probab=99.77  E-value=1.5e-18  Score=146.38  Aligned_cols=87  Identities=41%  Similarity=0.579  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 029655           91 LAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHAL  170 (190)
Q Consensus        91 l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~li~~~~~ii~eav  170 (190)
                      +++.|+++|+.+||.+|++||+|++.|++++++++++.+.++|++|++|||||+|+|+++++++++++++.++.++++++
T Consensus         2 l~~~k~~~g~~~~S~allada~~s~~D~~~~~~~l~~~~~~~~~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~~~~~si   81 (268)
T TIGR01297         2 LMLIKIVGGLLSGSLALLADAIHSLSDVAASAIALLALRISRRPADERHPFGHGRAEILAALLNGLFLVVVALFILYEAI   81 (268)
T ss_pred             EEEeehHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcc
Q 029655          171 DLLLDLL  177 (190)
Q Consensus       171 ~~Ll~~~  177 (190)
                      ++++++.
T Consensus        82 ~~l~~~~   88 (268)
T TIGR01297        82 ERLINPE   88 (268)
T ss_pred             HHHhCCC
Confidence            9999764

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.

>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=99.71  E-value=1.4e-16  Score=138.04  Aligned_cols=108  Identities=24%  Similarity=0.258  Sum_probs=100.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHH
Q 029655           77 AENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISS  156 (190)
Q Consensus        77 ~~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv  156 (190)
                      .+|-.+..+++|+.++.++.+++..+||+.|++|++|++.|+.+.++.+++..++++|++.+|+|||.|+|+++++.+++
T Consensus        33 ~sr~if~f~llnl~~~fv~l~y~~~snSlgLiSda~hm~FDctal~~gL~a~~is~~~~~~~fsyG~~r~evLagF~n~v  112 (354)
T KOG1484|consen   33 DSRSIFLFLLLNLAFMFVELFYGSWSNSLGLISDAFHMFFDCTALLAGLYASVISKWPANDKFSYGYGRIEVLAGFVNGV  112 (354)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHhhhhHHHHhcCCCccccCcchhHHHHHHHHHHHH
Confidence            35667777899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCccccccc
Q 029655          157 MLLATAGGIAWHALDLLLDLLSASPEVVRPVL  188 (190)
Q Consensus       157 ~li~~~~~ii~eav~~Ll~~~~~~p~~~~~~l  188 (190)
                      ++++.+++++.|+++||+++    ||+.++.|
T Consensus       113 flvl~a~fi~~Es~eRl~~p----pei~t~rl  140 (354)
T KOG1484|consen  113 FLVLIAFFIFSESVERLFDP----PEIHTNRL  140 (354)
T ss_pred             HHHHHHHHHhHHHHHHhcCc----hhcCCcee
Confidence            99999999999999999954    77776655

>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt

Probab=99.69  E-value=4.7e-18  Score=144.13  Aligned_cols=98  Identities=30%  Similarity=0.456  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 029655           81 FRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLA  160 (190)
Q Consensus        81 l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~li~  160 (190)
                      +++++++++++++.|+.+|+.+||.++++|++|++.|+++.++.+++.+.+++++|++|||||+|+|++++++.++++++
T Consensus         1 L~i~~~~~~~~~~~~~~~~~~t~S~al~~d~~~sl~d~~~~~~~l~~~~~~~~~~~~~~pfG~~r~e~l~~~~~~~~l~~   80 (284)
T PF01545_consen    1 LIISLILNLILAVVKIIAGIITGSLALLADGLHSLADAISLLISLFALRIASKPPDKRYPFGYGRLEPLAALIVSILLIF   80 (284)
T ss_dssp             -HHHHHHHCCTHHCTTCSS-SSSSS---SCCCHHHHHHHHHHHHHHHHHHHTSS-SSSSSSSSTTHHHHHHHHHHHHHHH
T ss_pred             CeeeHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccchhhhhhHhhhhhhhhHhh
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccC
Q 029655          161 TAGGIAWHALDLLLDLLS  178 (190)
Q Consensus       161 ~~~~ii~eav~~Ll~~~~  178 (190)
                      .++.++++++++++++..
T Consensus        81 ~~~~~~~~si~~~~~~~~   98 (284)
T PF01545_consen   81 LGLFLIVESIQRLISPHE   98 (284)
T ss_dssp             HHHHHHHHHTTTSSSSSS
T ss_pred             hHHHHHHHHhhccccccc
Confidence            999999999999998743

These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.

>KOG1483 consensus Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=99.63  E-value=1e-15  Score=134.80  Aligned_cols=101  Identities=27%  Similarity=0.344  Sum_probs=95.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHH
Q 029655           78 ENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSM  157 (190)
Q Consensus        78 ~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~  157 (190)
                      +..++..+++++++++.|++.++.++|++|++|++|++.|+++.++++++++.+++.++.+|+|||-|.|.+++++++++
T Consensus         8 ~~rli~~l~ltiiFfvLEli~gyv~~sLaLiadSfHML~dIiaLivaf~~ik~a~~~~~~k~tyGw~rAEilGalvN~if   87 (404)
T KOG1483|consen    8 SLRLISVLVLTIIFFVLELITGYVTNSLALIADSFHMLNDIIALIVAFWAIKEAKRIPLQKYTYGWARAEILGALVNAIF   87 (404)
T ss_pred             ccceeehHHHHHHHHHhhhhhhcccchHHHHhhHHHHHHHHHHHHHHHHHHHhhhcCcccccCcchhHHHHHhhhhHHHH
Confidence            44566778999999999999999999999999999999999999999999999998899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccC
Q 029655          158 LLATAGGIAWHALDLLLDLLS  178 (190)
Q Consensus       158 li~~~~~ii~eav~~Ll~~~~  178 (190)
                      +...++.++.|+++|++++..
T Consensus        88 l~alc~~I~~EA~~R~I~p~~  108 (404)
T KOG1483|consen   88 LTALCVSILIEAIERIIEPHH  108 (404)
T ss_pred             HHHHHHHHHHHHHHhhcCCcc
Confidence            999999999999999997754

>KOG1482 consensus Zn2+ transporter [Inorganic ion transport and metabolism]

Probab=99.63  E-value=2.4e-15  Score=131.87  Aligned_cols=106  Identities=29%  Similarity=0.382  Sum_probs=100.4

Q ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH
Q 029655           72 LSGKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGA  151 (190)
Q Consensus        72 ~~~~~~~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~a  151 (190)
                      ++++..+|.++++.++++.+++.|.+.|+..||+|+++|+.|.+.|+.+..+.+++++.++++++++..|||.|+|.+++
T Consensus        66 ~~~~~~~r~L~~~~~l~l~fm~~E~vGg~~a~SLAImTDAaHlLsD~~sf~isl~slw~s~~pa~~r~sfG~~R~Evlga  145 (379)
T KOG1482|consen   66 AKRRAAERKLSIAAALCLVFMIGEVVGGYKANSLAIMTDAAHLLSDVASFIISLFSLWLSSRPATKRMSFGFHRAEVLGA  145 (379)
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHhCCeeccchhhhhcchHHHHHHHHHHHHHHHHHHccCCCCCceecceehHHHHHH
Confidence            34445678999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc
Q 029655          152 LGISSMLLATAGGIAWHALDLLLDLL  177 (190)
Q Consensus       152 li~sv~li~~~~~ii~eav~~Ll~~~  177 (190)
                      ++..+.++...+.++++++++++++.
T Consensus       146 l~Sv~~IW~~tgvLV~~Ai~Rl~s~~  171 (379)
T KOG1482|consen  146 LVSVLLIWVVTGVLVYEAIQRLLSGD  171 (379)
T ss_pred             HHHHHHHHHhhhhhHHHHHhhhhcCc
Confidence            99999999999999999999999764

>KOG2802 consensus Membrane protein HUEL (cation efflux superfamily) [General function prediction only]

Probab=99.42  E-value=1.4e-13  Score=120.83  Aligned_cols=108  Identities=18%  Similarity=0.181  Sum_probs=100.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHH
Q 029655           75 KDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGI  154 (190)
Q Consensus        75 ~~~~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~  154 (190)
                      +...|+..+++++|++-+.+|+.+|+.+||-.|+|+++||++|.+..++..+|+..+.+.||..|||||++.-.+..|+.
T Consensus       203 k~s~rvVatAi~iN~l~~~~Kfg~w~~tgShsmfAEaIHS~aD~~NQ~lLa~Gis~S~q~PD~lhPYGYsnmRyVsSLIS  282 (503)
T KOG2802|consen  203 KGSGRVVATAICINGLNCFFKFGAWIYTGSHSMFAEAIHSLADTCNQLLLALGISKSVQTPDPLHPYGYSNMRYVSSLIS  282 (503)
T ss_pred             cCCCceehhHHHHHHHHHHHHhhHhhhcccHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCcccchhHHHHHHh
Confidence            44567888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHH-HHHHHHHHHhccCCCCc
Q 029655          155 SSMLLATAGGI-AWHALDLLLDLLSASPE  182 (190)
Q Consensus       155 sv~li~~~~~i-i~eav~~Ll~~~~~~p~  182 (190)
                      ++-|+.+|..+ +++.++.|+++.+.++-
T Consensus       283 gvGIfc~G~GlSiyhGv~gLlhpePi~~l  311 (503)
T KOG2802|consen  283 GVGIFCMGCGLSIYHGVMGLLHPEPIESL  311 (503)
T ss_pred             ccceeeecccchhhhccccccCCCCCcch
Confidence            99999988887 89999999988765543

>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

Probab=99.31  E-value=1.2e-11  Score=104.50  Aligned_cols=104  Identities=28%  Similarity=0.285  Sum_probs=98.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCchHHHHHHHHHHH
Q 029655           76 DAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAK-APKDKEHPYGHGKFETLGALGI  154 (190)
Q Consensus        76 ~~~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~-~~~~~~~p~G~~r~E~l~ali~  154 (190)
                      .+++.+.++++..++++...+++|..+||.+++-||++++.|+..+.+.+...++.. ++++.|||||+.-+|++.-.++
T Consensus        17 ~eq~~L~~Si~~tvi~A~~GIi~GL~~gS~~IiFDGvYSl~da~mtllsL~vsrli~~~p~~~RF~~GfwhlEplvL~in   96 (314)
T COG3965          17 NEQLYLRISIAGTVIFAAFGIIWGLLSGSMSIIFDGVYSLIDAGMTLLSLLVSRLIAKDPRDARFPYGFWHLEPLVLAIN   96 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcceEEEeccHHHHHHHHHHHHHHHHHHHhccCCCccccCcchhhhhhhHhhhc
Confidence            457899999999999999999999999999999999999999999999999998877 6777799999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCC
Q 029655          155 SSMLLATAGGIAWHALDLLLDLLSA  179 (190)
Q Consensus       155 sv~li~~~~~ii~eav~~Ll~~~~~  179 (190)
                      +.+|...+++.++.++..|+|+..+
T Consensus        97 g~ll~ll~lyAlinAl~~l~dGGR~  121 (314)
T COG3965          97 GTLLALLCLYALINALGSLLDGGRE  121 (314)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            9999999999999999999998754

>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

Probab=99.28  E-value=4.8e-11  Score=103.71  Aligned_cols=95  Identities=25%  Similarity=0.194  Sum_probs=86.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHH
Q 029655           78 ENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSM  157 (190)
Q Consensus        78 ~r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~  157 (190)
                      --+..++++++.++..++...+..+||.+|.||++|+.+|+++++.+++++....        +||.++|++++++++++
T Consensus       120 ~~v~l~s~~~~~~l~~~~~~~~kk~~S~aL~Ada~h~~sD~~ts~~~lvgl~~~~--------~g~~~lD~i~a~~I~~~  191 (304)
T COG0053         120 LGVALISIVIKEALYRYLRRVGKKTNSQALIADALHHRSDVLTSLAVLVGLLGSL--------LGWPWLDPLAALLISLY  191 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHHHHH--------hCcHHHHHHHHHHHHHH
Confidence            3456688889999999999999999999999999999999999999999999443        78999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCC
Q 029655          158 LLATAGGIAWHALDLLLDLLSAS  180 (190)
Q Consensus       158 li~~~~~ii~eav~~Ll~~~~~~  180 (190)
                      ++..++.++++++..|+|...++
T Consensus       192 Il~~~~~~~~~s~~~L~d~~~~~  214 (304)
T COG0053         192 ILKTGFRLFKESVNELMDAALDP  214 (304)
T ss_pred             HHHHHHHHHHHHHHHHhCcCCCH
Confidence            99999999999999999855443

>PRK09509 fieF ferrous iron efflux protein F; Reviewed

Probab=99.04  E-value=3.1e-09  Score=91.77  Aligned_cols=92  Identities=26%  Similarity=0.265  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 029655           80 IFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLL  159 (190)
Q Consensus        80 ~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~li  159 (190)
                      +..+++++|+++..++...+..++|.++.+|+.|.+.|+++++++++++.++.        +|+.++|++++++++++++
T Consensus       120 ~~~~~~v~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vl~~~~~~~--------~g~~~~D~i~aiii~~~il  191 (299)
T PRK09509        120 VTLVALICTLILVTFQRWVVRKTQSQAVRADMLHYQSDVMMNGAILLALGLSW--------YGWHRADALFALGIGIYIL  191 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hChHHHHHHHHHHHHHHHH
Confidence            45677888888888899999999999999999999999999999999998875        5889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccCC
Q 029655          160 ATAGGIAWHALDLLLDLLSA  179 (190)
Q Consensus       160 ~~~~~ii~eav~~Ll~~~~~  179 (190)
                      ..++.++++++..|++...+
T Consensus       192 ~~~~~i~~~~~~~Ll~~~~~  211 (299)
T PRK09509        192 YSALRMGYEAVQSLLDRALP  211 (299)
T ss_pred             HHHHHHHHHHHHHHhccCCC
Confidence            99999999999999986433

>TIGR01297 CDF cation diffusion facilitator family transporter

Probab=99.03  E-value=3.3e-09  Score=89.38  Aligned_cols=94  Identities=28%  Similarity=0.215  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHH
Q 029655           79 NIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSML  158 (190)
Q Consensus        79 r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~l  158 (190)
                      .+..+++++|++++.++...+...+|.++.+|+.|.+.|+++++.++++..++.        ||+.++|+++++++++++
T Consensus        98 ~~~~~~~~v~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vli~~~~~~--------~~~~~~D~l~~i~i~~~i  169 (268)
T TIGR01297        98 IVAIVGLIVNLILALYLHRVGHRLGSLALRAAALHVLSDALSSVGVLIGALLIY--------FGWHWADPIAALLISLLI  169 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHhHHHHHHHHHHH
Confidence            456678888999999999999999999999999999999999999999998886        678999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCC
Q 029655          159 LATAGGIAWHALDLLLDLLSAS  180 (190)
Q Consensus       159 i~~~~~ii~eav~~Ll~~~~~~  180 (190)
                      +..++.++++++..|++..+++
T Consensus       170 ~~~~~~l~~~~~~~Ll~~~~~~  191 (268)
T TIGR01297       170 LYTAFRLLKESINVLLDAAPDE  191 (268)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCc
Confidence            9999999999999999876543

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.

>PRK03557 zinc transporter ZitB; Provisional

Probab=98.70  E-value=1.4e-07  Score=82.11  Aligned_cols=90  Identities=18%  Similarity=0.080  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 029655           83 LGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATA  162 (190)
Q Consensus        83 isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~li~~~  162 (190)
                      .++++|++.+.... .+...+|.++.+|++|.+.|+++++.++++..+...       +|+.++|++++++++++++..+
T Consensus       130 ~~~~~~~~~~~~~~-~~~~~~s~~l~a~~~h~~~D~l~s~~vlv~~~~~~~-------~g~~~~Dpi~~ilis~~i~~~~  201 (312)
T PRK03557        130 AGLLANILSFWLLH-HGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIW-------TGWTPADPILSILVSVLVLRSA  201 (312)
T ss_pred             HHHHHHHHHHHHHh-cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCcchhHHHHHHHHHHHHHHH
Confidence            44455554433332 355578999999999999999999999888876642       4667799999999999999999


Q ss_pred             HHHHHHHHHHHHhccCCC
Q 029655          163 GGIAWHALDLLLDLLSAS  180 (190)
Q Consensus       163 ~~ii~eav~~Ll~~~~~~  180 (190)
                      +.++++++..|++..+++
T Consensus       202 ~~l~~~~~~~Lld~~p~~  219 (312)
T PRK03557        202 WRLLKESVNELLEGAPVS  219 (312)
T ss_pred             HHHHHHHHHHHHccCCCC
Confidence            999999999999876543

>KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=98.57  E-value=1.8e-07  Score=83.76  Aligned_cols=94  Identities=20%  Similarity=0.202  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHHHH
Q 029655           81 FRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLA  160 (190)
Q Consensus        81 l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~li~  160 (190)
                      ..+++.+..+.+..-+.++..++|-.+.|.|+|..+|+++..++|++..++.        |.++++||++++++|++++.
T Consensus       233 i~i~is~~~vk~~l~~~c~~~~ns~iv~a~A~dHr~D~lTn~vaLva~~la~--------~~~~~lDP~gailVS~~ii~  304 (412)
T KOG1485|consen  233 IAIMISAKEVKLRLTLYCAIKTNSNIVRANAWDHRNDVLTNSVALVAASLAY--------YYNYWLDPIGAILVSTYIIY  304 (412)
T ss_pred             heehhhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhHHHHHHHHHHHHHHHH--------hhhhcccchhhhhhheehhh
Confidence            3455666677777777888999999999999999999999999999999998        56789999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCCCcc
Q 029655          161 TAGGIAWHALDLLLDLLSASPEV  183 (190)
Q Consensus       161 ~~~~ii~eav~~Ll~~~~~~p~~  183 (190)
                      .++.-..+++..|++.. .+||.
T Consensus       305 t~~~t~~~~i~~Lvg~~-a~pe~  326 (412)
T KOG1485|consen  305 TGGRTGLENIKELVGRS-APPEY  326 (412)
T ss_pred             hhhHHHHHHHHHHhCCC-CCHHH
Confidence            99999999999999873 45544

>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt

Probab=97.59  E-value=2.5e-05  Score=66.13  Aligned_cols=90  Identities=24%  Similarity=0.128  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhc--hHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHHHHHHHH
Q 029655           81 FRLGLASDVGLAAGKALTGYLSG--STAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHG-KFETLGALGISSM  157 (190)
Q Consensus        81 l~isl~~nl~l~i~ki~~g~~s~--S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~-r~E~l~ali~sv~  157 (190)
                      ..+++++|+++.......+...+  |..+.+++.|.+.|++.++.++++..+....       ++. .+|++++++++++
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~~~~~~~~d~~~s~~v~i~~~~~~~~-------~~~~~~D~v~~l~i~~~  181 (284)
T PF01545_consen  109 ALVSIIVNLLLAWYLRRVGKRLQRRSPALRADALHSLIDVLSSLAVLISLLLAYLG-------PWFWYADPVASLLIALF  181 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHS---SHHHHHHHHHHHHHTS-SSTS-SSSTSSSTT--------STS-SSHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHhhcccccccccccchhhhhhcccchhHHHHHHHHHHHHHHH-------hcccccchhhhhHHHHH
Confidence            66788888888888888888888  9999999999999999999998888776531       233 4999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcc
Q 029655          158 LLATAGGIAWHALDLLLDLL  177 (190)
Q Consensus       158 li~~~~~ii~eav~~Ll~~~  177 (190)
                      ++..++.++++++..|++..
T Consensus       182 i~~~~~~~~~~~~~~Ll~~~  201 (284)
T PF01545_consen  182 ILYSGYPLIKESIRILLDAS  201 (284)
T ss_dssp             HHHHHHHHHHHHHHHHTT-S
T ss_pred             Hhhhhhhchhhhhccccccc
Confidence            99999999999999999875

These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.

>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]

Probab=97.46  E-value=0.0009  Score=58.23  Aligned_cols=94  Identities=14%  Similarity=0.101  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHH
Q 029655           79 NIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSML  158 (190)
Q Consensus        79 r~l~isl~~nl~l~i~ki~~g~~s~S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~l  158 (190)
                      -+..+++++|++.+..-.-.  ...+.-+-+--+|.+.|.+.+..++++-.....       +||.++|++.++++++++
T Consensus       129 ~va~~GL~vN~~~a~ll~~~--~~~~lN~r~a~LHvl~D~Lgsv~vIia~i~i~~-------~~w~~~Dpi~si~i~~li  199 (296)
T COG1230         129 VVAIIGLVVNLVSALLLHKG--HEENLNMRGAYLHVLGDALGSVGVIIAAIVIRF-------TGWSWLDPILSIVIALLI  199 (296)
T ss_pred             HHHHHHHHHHHHHHHHhhCC--CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCccchHHHHHHHHHH
Confidence            34556666666554443322  223788888899999999999988888777664       788899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCCC
Q 029655          159 LATAGGIAWHALDLLLDLLSASP  181 (190)
Q Consensus       159 i~~~~~ii~eav~~Ll~~~~~~p  181 (190)
                      +..++.+++++.+.|++..++..
T Consensus       200 l~~a~~l~k~s~~iLle~~P~~i  222 (296)
T COG1230         200 LSSAWPLLKESLNILLEGVPEGI  222 (296)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCcc
Confidence            99999999999999998876443

>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=95.41  E-value=0.051  Score=48.06  Aligned_cols=64  Identities=17%  Similarity=0.158  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 029655          112 AHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLSASPEVV  184 (190)
Q Consensus       112 ~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~li~~~~~ii~eav~~Ll~~~~~~p~~~  184 (190)
                      .|-++|.+.+..++++-.+.+.       +||..+||+..++++++++...+-+++++.+.|+..  .||+..
T Consensus       212 LHVLaDtlgSvGviist~Li~~-------~gw~~aDpicsllIailIf~sv~PL~k~s~~iLLq~--tPp~~~  275 (354)
T KOG1484|consen  212 LHVLADTLGSVGVIISTLLIKL-------FGWMIADPICSLLIAILIFLSVLPLLKYSGKILLQR--TPPHLE  275 (354)
T ss_pred             HHHHHHHhcchHHHHHHHHHHh-------cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CChhhh
Confidence            3778888888888888888765       799999999999999999999999999999999965  445444

>KOG1482 consensus Zn2+ transporter [Inorganic ion transport and metabolism]

Probab=87.46  E-value=2.4  Score=38.10  Aligned_cols=70  Identities=16%  Similarity=0.077  Sum_probs=59.3

Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 029655          104 STAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATAGGIAWHALDLLLDLLSA  179 (190)
Q Consensus       104 S~aL~ADa~hsl~Dv~s~~~~l~~l~~s~~~~~~~~p~G~~r~E~l~ali~sv~li~~~~~ii~eav~~Ll~~~~~  179 (190)
                      +..+-|--+|-+.|++=+..++++-.+.+-      -=+|--+|++-.++.+++.+.+.+.++++.+..||++.+.
T Consensus       223 n~nvraAyiHVlGDliQSvGV~iaa~Ii~f------~P~~~i~DpICT~~FSiivl~TT~~i~rd~~~iLmE~~P~  292 (379)
T KOG1482|consen  223 NLNVRAAFVHVLGDLIQSVGVLIAALIIYF------KPEYKIADPICTFVFSIIVLGTTITILRDILGILMEGTPR  292 (379)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhheeEEe------cccceecCchhhhhHHHHHHHhHHHHHHHHHHHHhcCCCc
Confidence            666677778999999999999888877762      2256679999999999999999999999999999987643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	190
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	4e-30
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	3e-06

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Length = 283

 Score =  110 bits (277), Expect = 4e-30
 Identities = 25/94 (26%), Positives = 40/94 (42%)

Query: 82  RLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPY 141
               A    L   K    + +GS +I+A    S+ D+  S   L   + +  P D  H +
Sbjct: 7   IAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSF 66

Query: 142 GHGKFETLGALGISSMLLATAGGIAWHALDLLLD 175
           GHGK E+L AL  S  +  +A  +    +  L+ 
Sbjct: 67  GHGKAESLAALAQSMFISGSALFLFLTGIQHLIS 100

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Length = 283

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 9/83 (10%)

Query: 103 GSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLATA 162
            S A+ AD  H  SDV+++   L +   +         YG  + + L ALGI   +L +A
Sbjct: 136 QSQAVRADMLHYQSDVMMNGAILLALGLSW--------YGWHRADALFALGIGIYILYSA 187

Query: 163 GGIAWHALDLLLDLLSASPEVVR 185
             + + A+  LLD  +   E  +
Sbjct: 188 LRMGYEAVQSLLD-RALPDEERQ 209

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	190
d2qfia2	204	f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {	2e-13

>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} Length = 204

class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]

 Score = 63.6 bits (154), Expect = 2e-13
 Identities = 25/93 (26%), Positives = 40/93 (43%)

Query: 83  LGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYG 142
              A    L   K    + +GS +I+A    S+ D+  S   L   + +  P D  H +G
Sbjct: 11  AATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFG 70

Query: 143 HGKFETLGALGISSMLLATAGGIAWHALDLLLD 175
           HGK E+L AL  S  +  +A  +    +  L+ 
Sbjct: 71  HGKAESLAALAQSMFISGSALFLFLTGIQHLIS 103

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	190
d2qfia2	204	Ferrous-iron efflux pump FieF {Escherichia coli [T	99.76
d2qfia2	204	Ferrous-iron efflux pump FieF {Escherichia coli [T	95.79

>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=1.4e-23  Score=147.60  Aligned_cols=110  Identities=24%  Similarity=0.250  Sum_probs=103.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             10256899999999999999999999973139899919999998999999999999941799989987267899999999
Q 029655           74 GKDAENIFRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALG  153 (190)
Q Consensus        74 ~~~~~r~l~i~l~~nl~l~v~k~~~~~~sgS~AL~ADa~hsl~D~~~~~i~l~~~~~s~~~~~~~~p~G~~rlE~l~aL~  153 (190)
                      .|..+|+.++++++|+++++.|+++++.+||++|++|++|++.|+++.++.+++.+.++|++|++|||||+|+|++++++
T Consensus         2 ~r~~~r~~~~~~~~n~~l~i~~~~~~~~t~S~allada~~s~~D~~~~~~~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~   81 (204)
T d2qfia2           2 GRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALA   81 (204)
T ss_dssp             CSSSSTTSHHHHGGGTTTTTBTTBCCCCTTSSCCCCCCCTTHHHHHHHHHHHHHHTTSSSSCSTTSSCSCCTHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             39999999999999999999999999995529999999999999999999999987607999866886426787999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             999999999999999999987124999731
Q 029655          154 ISSMLLATAGGIAWHALDLLLDLLSASPEV  183 (190)
Q Consensus       154 ~si~Ll~~~~~ii~~si~~L~~~~~~~p~~  183 (190)
                      ++++++..++.++++++++++++...++..
T Consensus        82 ~~~~l~~~~~~~~~~si~~l~~~~~~~~~~  111 (204)
T d2qfia2          82 QSMFISGSALFLFLTGIQHLISPTPMTDPG  111 (204)
T ss_dssp             TTTTTSSSTTGGGSSCTTSSTTTSSSSTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf             899999999999999999997201134609

>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]

Probab=95.79  E-value=1.8e-07  Score=57.33  Aligned_cols=88  Identities=27%  Similarity=0.282  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999731398999199999989999999999999417999899872678999999999999999
Q 029655           81 FRLGLASDVGLAAGKALTGYLSGSTAIIADAAHSISDVVLSSIALWSYKAAKAPKDKEHPYGHGKFETLGALGISSMLLA  160 (190)
Q Consensus        81 l~i~l~~nl~l~v~k~~~~~~sgS~AL~ADa~hsl~D~~~~~i~l~~~~~s~~~~~~~~p~G~~rlE~l~aL~~si~Ll~  160 (190)
                      ..+++.+++.+...+...+...+|.++.+|+.|...|++.++.++.+.....        +|+.++|++++++++++++.
T Consensus       117 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~a~~~~~~~D~~~s~~vii~~~~~~--------~~~~~~D~i~aiii~~~i~~  188 (204)
T d2qfia2         117 TIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSW--------YGWHRADALFALGIGIYILY  188 (204)
T ss_dssp             CGGGSSCGGGGTTTHHHHGGGCCSTTSGGGGGGHHHHTCCSSTTCCCTTSSC--------SSTTSSSSSSHHHHTTTTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999988722002145269999999978998799999999999--------38403269999999999999


Q ss_pred             HHHHHHHHHHHHHHHC
Q ss_conf             9999999999998712
Q 029655          161 TAGGIAWHALDLLLDL  176 (190)
Q Consensus       161 ~~~~ii~~si~~L~~~  176 (190)
                      .++.++++++..|+|.
T Consensus       189 ~~~~~~~~~~~~Lld~  204 (204)
T d2qfia2         189 SALRMGYEAVQSLLDR  204 (204)
T ss_dssp             TTTTHHHHTGGGSSCC
T ss_pred             HHHHHHHHHHHHHHCC
T ss_conf             9999999999987294