Citrus Sinensis ID: 029871

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
Protein Sequence
MGYSHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIEK
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHcccccccEEEEEEccccEEEEEEcccccccccEEEccccEEEEcccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccccHHHHcccccccEEcccccccccccEEEEEEEEEccEEEEEEEEEccccEEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccHHHcccccccccHHHHHHHHHHHHcccccEEEEEEEcccccEEEEEccccccccccEEccccEEEEccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccHHHcccccccHHHHHHHcHHHHEccccccccccccEEEEEEEccccEEEEEEEcccccccccEEEEEEEc
Coil and Loop (DISEMBL)
mgyshfftsnvskkkplDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTnrseggksiatevspgIHVLTnalldspwpkaQRLGHAFKELMDKYGEGELQMKEMADELMMDttkddegllphiyppeteshlssifidterplgrygtrstsslyvksngevYFYERHLEKDLWKEQTVAYQIEK
Flexible Loop (DISEMBL)
mgyshfftsnvskkkpLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETESHLSSIFIDterplgrygtrstsslyvksNGEVYFYERHLEKDLWKEQTVAYQIEK
Low Complexity Region (SEG)
MGYSHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIEK
Disordered region (IsUnstruct)
****************LDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDSPWPKAQRLGHAFKELM****************************************LSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAY****
Disordered Region (DISOPRED)
MGYSHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIEK
Disordered Region (DISEMBL)
********SNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQ********
Disordered Region (DISPRO)
*GY**FFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIEK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGYSHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIEK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	186	2.2.26 [Sep-21-2011]
P54797	276	Ser/Thr-rich protein T10	yes	no	0.908	0.612	0.276	2e-11
Q6ICL3	276	Transport and Golgi organ	yes	no	0.908	0.612	0.280	2e-10
Q29RZ5	276	Transport and Golgi organ	yes	no	0.913	0.615	0.251	3e-08

>sp|P54797|T10_MOUSE Ser/Thr-rich protein T10 in DGCR region OS=Mus musculus GN=T10 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 23/192 (11%)

Query: 4   SHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKS---MVYVTNRSEGGKSIAT 60
           SHF TS++     L + +++ TE   YNGFN++  ++ +     + Y  NR E    + T
Sbjct: 93  SHFLTSDMDS---LSYLKKVSTEGHLYNGFNIIAADLSTSKGDVVCYYGNRGEPEPIVLT 149

Query: 61  EVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGL 120
              PG + L+NALL++PW   ++L    +  M+   + E   K++    ++D   ++E  
Sbjct: 150 ---PGTYGLSNALLETPW---KKLCFGKQLFMEAVEQSEALPKDVLVTQLLDVLNNEEAQ 203

Query: 121 LPHIYPPETESH-------LSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERH-LEK 172
           LP    P  E         + + +         YGTR+ + + V +NG V F ER  L+K
Sbjct: 204 LPD---PAIEDQGQEYVQPILNKYAAVWCRCASYGTRTNTIILVDANGHVTFTERSMLDK 260

Query: 173 DLWKEQTVAYQI 184
           D  + +T  Y+ 
Sbjct: 261 DTSRWETNTYEF 272

Mus musculus (taxid: 10090)

>sp|Q6ICL3|TNG2_HUMAN Transport and Golgi organization 2 homolog OS=Homo sapiens GN=TANGO2 PE=2 SV=1

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 27/196 (13%)

Query: 4   SHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKS---MVYVTNRSEGGKSIAT 60
           +HF T++V     L + +++  E   YNGFNL+  ++ +     + Y  NR E    + T
Sbjct: 93  THFLTTDVDS---LSYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLT 149

Query: 61  EVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGL 120
              PG + L+NALL++PW K       F E +++    +   K++    ++D   ++E  
Sbjct: 150 ---PGTYGLSNALLETPWRKLCFGKQLFLEAVER---SQALPKDVLIASLLDVLNNEEAQ 203

Query: 121 LPHIYPPETESH--------LSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERH-LE 171
           LP    P  E          LS       R  G YGTR+ + + V ++G V F ER  ++
Sbjct: 204 LPD---PAIEDQGGEYVQPMLSKYAAVCVRCPG-YGTRTNTIILVDADGHVTFTERSMMD 259

Query: 172 KDL--WKEQTVAYQIE 185
           KDL  W+ +T  + ++
Sbjct: 260 KDLSHWETRTYEFTLQ 275

Homo sapiens (taxid: 9606)

>sp|Q29RZ5|TNG2_BOVIN Transport and Golgi organization 2 homolog OS=Bos taurus GN=TANGO2 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 25/195 (12%)

Query: 4   SHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKS---MVYVTNRSEGGKSIAT 60
           + F TS++     L + +++  E   YNGFNL+  ++ ++    + Y  NR E    +  
Sbjct: 93  AQFLTSDMDS---LSYLKKVSAEGHLYNGFNLIAADLSAEKGDVICYYGNRGEREPVV-- 147

Query: 61  EVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGL 120
            ++PG + L+NALL++PW K       F E +++    EL    +  +L+     +DE  
Sbjct: 148 -LAPGTYGLSNALLETPWRKLCFGKQLFLEAVER--GRELPRDALVAQLLA-VLSNDEAQ 203

Query: 121 LPHIYPPETESH-------LSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHL--- 170
           LP    P  E+        + S +         YGTR+++ + V ++G V F ER +   
Sbjct: 204 LPD---PAIEAQGREYVRPILSKYAAVCVRCPDYGTRTSTVILVDADGHVTFTERSMLGS 260

Query: 171 EKDLWKEQTVAYQIE 185
           +   W+  T  ++++
Sbjct: 261 DPTRWETTTHEFRLQ 275

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
359474959	272	PREDICTED: ser/Thr-rich protein T10 in D	0.940	0.643	0.645	1e-64
224131884	262	predicted protein [Populus trichocarpa]	0.930	0.660	0.647	1e-59
15451202	253	putative protein [Arabidopsis thaliana]	0.930	0.683	0.555	7e-51
18420207	275	uncharacterized protein [Arabidopsis tha	0.930	0.629	0.555	9e-51
357475105	275	Ser/Thr-rich protein T10 in DGCR region	0.913	0.618	0.588	4e-50
147814820	266	hypothetical protein VITISV_012025 [Viti	0.940	0.657	0.56	1e-49
356577141	268	PREDICTED: uncharacterized protein C22or	0.919	0.638	0.568	2e-49
297801914	273	hypothetical protein ARALYDRAFT_912278 [	0.930	0.633	0.544	2e-49
225457562	266	PREDICTED: ser/Thr-rich protein T10 in D	0.940	0.657	0.554	4e-49
224083298	262	predicted protein [Populus trichocarpa]	0.940	0.667	0.542	2e-48

>gi|359474959|ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Vitis vinifera] gi|297744476|emb|CBI37738.3| unnamed protein product [Vitis vinifera]

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/175 (64%), Positives = 143/175 (81%)

Query: 12  SKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTN 71
           SKK P++FAEE++ EAD+YNGFNL+I ++ SK+M+Y+TNR         EVSPGIHVL+N
Sbjct: 90  SKKNPMEFAEEVMKEADKYNGFNLIIADLCSKTMIYITNRPREANVSVVEVSPGIHVLSN 149

Query: 72  ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETES 131
           A LDSPWPKA+RLGH FKEL+DKYGEGE+  +EM ++LM +T KDDE +LP IYPPE E 
Sbjct: 150 ASLDSPWPKARRLGHNFKELLDKYGEGEIPTEEMVEKLMKNTIKDDEIVLPRIYPPEREH 209

Query: 132 HLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIEK 186
            LSSIF+DT+ PLGRYGTRSTSS+ V+++GEV FYE+HLE + W+E TV YQIE+
Sbjct: 210 QLSSIFVDTDTPLGRYGTRSTSSVCVRASGEVNFYEKHLENETWRENTVTYQIER 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131884|ref|XP_002328132.1| predicted protein [Populus trichocarpa] gi|222837647|gb|EEE76012.1| predicted protein [Populus trichocarpa]

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 112/173 (64%), Positives = 137/173 (79%)

Query: 12  SKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTN 71
           S K P ++AEE+  EADQYNGFNL++ +I SKSMVY+TNR +    I  EV+PG+HVL+N
Sbjct: 90  SNKNPKEYAEELSKEADQYNGFNLILADISSKSMVYLTNRPKPENFIVMEVTPGMHVLSN 149

Query: 72  ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETES 131
           A LDSPWPKAQRLGH FK+L++KY E EL  KEMA+ LM +T KDDE +LP IYP E E 
Sbjct: 150 ASLDSPWPKAQRLGHGFKDLLEKYDEAELPTKEMAEILMTNTIKDDESMLPGIYPSEREH 209

Query: 132 HLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQI 184
            LSSIFI+ + PLGRYGTRST +L VKS+GEV FYER+L+KD WKE T++YQI
Sbjct: 210 QLSSIFIEADTPLGRYGTRSTCALSVKSSGEVNFYERYLDKDQWKEHTMSYQI 262

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15451202|gb|AAK96872.1| putative protein [Arabidopsis thaliana] gi|20148245|gb|AAM10013.1| putative protein [Arabidopsis thaliana]

 Score =  205 bits (521), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 129/180 (71%), Gaps = 7/180 (3%)

Query: 12  SKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTN 71
           S+K P +FAEEI  E   YNGFNLV+ ++ SKSM+Y+TNR   G  + T+VSPGIHVL+N
Sbjct: 68  SEKSPAEFAEEIQDEISLYNGFNLVVAHVLSKSMIYITNRPPHGDKLVTQVSPGIHVLSN 127

Query: 72  ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETES 131
           A LDSPWPK  RL   F++L+ + G GE  +K M +E+M +T KD+E  LPH++ PETE 
Sbjct: 128 ANLDSPWPKCLRLREGFQQLLAENGSGEFPVKTMVEEVMTNTVKDEETELPHVFTPETEY 187

Query: 132 HLSSIFIDTERPLGRYGTRSTSSLYVKS------NGEVYFYERHLEK-DLWKEQTVAYQI 184
           HLSSIF+D +RP GRYGTRS S++ VKS      +GE+ FYERHLE+ D WKE T  + I
Sbjct: 188 HLSSIFVDMQRPTGRYGTRSISAIIVKSHGDGGGDGEICFYERHLEEGDSWKEHTQQFVI 247

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18420207|ref|NP_568038.1| uncharacterized protein [Arabidopsis thaliana] gi|332661506|gb|AEE86906.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  205 bits (521), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 129/180 (71%), Gaps = 7/180 (3%)

Query: 12  SKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTN 71
           S+K P +FAEEI  E   YNGFNLV+ ++ SKSM+Y+TNR   G  + T+VSPGIHVL+N
Sbjct: 90  SEKSPAEFAEEIQDEISLYNGFNLVVAHVLSKSMIYITNRPPHGDKLVTQVSPGIHVLSN 149

Query: 72  ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETES 131
           A LDSPWPK  RL   F++L+ + G GE  +K M +E+M +T KD+E  LPH++ PETE 
Sbjct: 150 ANLDSPWPKCLRLREGFQQLLAENGSGEFPVKTMVEEVMTNTVKDEETELPHVFTPETEY 209

Query: 132 HLSSIFIDTERPLGRYGTRSTSSLYVKS------NGEVYFYERHLEK-DLWKEQTVAYQI 184
           HLSSIF+D +RP GRYGTRS S++ VKS      +GE+ FYERHLE+ D WKE T  + I
Sbjct: 210 HLSSIFVDMQRPTGRYGTRSISAIIVKSHGDGGGDGEICFYERHLEEGDSWKEHTQQFVI 269

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357475105|ref|XP_003607838.1| Ser/Thr-rich protein T10 in DGCR region [Medicago truncatula] gi|355508893|gb|AES90035.1| Ser/Thr-rich protein T10 in DGCR region [Medicago truncatula]

 Score =  202 bits (514), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 103/175 (58%), Positives = 130/175 (74%), Gaps = 5/175 (2%)

Query: 12  SKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTN 71
           S K P +FAEE+L EA  YNGFNLV+ +I + +MVYV NR   G      V+PGIHVLTN
Sbjct: 100 SDKSPEEFAEEVLKEAHLYNGFNLVLADICTSTMVYVFNRPNHG---YLSVTPGIHVLTN 156

Query: 72  ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDE-GLLPHIYPPETE 130
           A LD+PW KA+RL H+FKEL+D+YG+GE  +KEM ++LM +T KDD+  LLP I PPE E
Sbjct: 157 ASLDAPWSKAERLRHSFKELVDQYGDGEFPIKEMVEKLMTNTVKDDDKCLLPGIRPPEFE 216

Query: 131 SHLSSIFIDTERP-LGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQI 184
             LSSIF+DT+ P +G YGTRSTS+L+V SN EV FYE+HL++  WK+  V YQI
Sbjct: 217 FPLSSIFVDTQFPSVGPYGTRSTSALFVTSNKEVTFYEKHLDQKQWKDNMVTYQI 271

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147814820|emb|CAN74747.1| hypothetical protein VITISV_012025 [Vitis vinifera]

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 98/175 (56%), Positives = 125/175 (71%)

Query: 12  SKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTN 71
           S+K P ++AEEI  E D+YNGFNL++ +I SK+MVYV+NR EG      E+SPGIHVL+N
Sbjct: 90  SRKSPHEYAEEITKEGDEYNGFNLIVADIASKTMVYVSNRPEGEPPTIQEISPGIHVLSN 149

Query: 72  ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETES 131
           A L  PW K QRL   FKEL+ KYGE ++ +KEM ++LM DT K DE +LPHI   + E 
Sbjct: 150 AKLGIPWHKVQRLRGKFKELLGKYGESDIPIKEMIEKLMRDTVKADESMLPHICALDWEC 209

Query: 132 HLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIEK 186
             SSIF DTE  +G +GTRST++L V + GEV FYE  LEK++W E+TV Y IEK
Sbjct: 210 DQSSIFTDTETKMGHFGTRSTAALTVTATGEVTFYETCLEKEIWAEKTVNYCIEK 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356577141|ref|XP_003556686.1| PREDICTED: uncharacterized protein C22orf25-like [Glycine max]

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/174 (56%), Positives = 133/174 (76%), Gaps = 3/174 (1%)

Query: 14  KKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNR-SEGGKSIA-TEVSPGIHVLTN 71
           K P +FAE+++ EAD+YNGFNLV+ +I + SMVYV NR ++   S+A   V+PGIHVLTN
Sbjct: 92  KSPEEFAEQVVKEADEYNGFNLVLADICTSSMVYVFNRPNQDHLSLAQVVVTPGIHVLTN 151

Query: 72  ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETES 131
           A LD+PWPKA+RL H FKE +D+YGE +  +KEM ++LM +T KD+E +LP I+PPE E 
Sbjct: 152 AALDAPWPKAERLRHNFKEFIDQYGESDFPIKEMVEKLMTNTVKDEECMLPGIHPPEREQ 211

Query: 132 HLSSIFIDTE-RPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQI 184
            LSSIF++ E    G YGTRS+S+L+VKSN EV FYE++LEK  WK++ V Y+I
Sbjct: 212 PLSSIFVEAELSSSGHYGTRSSSALFVKSNKEVTFYEKYLEKKQWKDKMVTYKI 265

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801914|ref|XP_002868841.1| hypothetical protein ARALYDRAFT_912278 [Arabidopsis lyrata subsp. lyrata] gi|297314677|gb|EFH45100.1| hypothetical protein ARALYDRAFT_912278 [Arabidopsis lyrata subsp. lyrata]

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/180 (54%), Positives = 127/180 (70%), Gaps = 7/180 (3%)

Query: 12  SKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTN 71
           S+K P +FAEEI  E   YNGFNLV+ ++ SKSM+Y+TNR   G  +AT+VSPGIHVL+N
Sbjct: 90  SRKSPAEFAEEIQDEISLYNGFNLVVAHVLSKSMIYITNRPPHGHKLATQVSPGIHVLSN 149

Query: 72  ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETES 131
           A LDSPWPK  RL   F++L+ + G  E  +K M +E+M +T KD+E  LPH++ PETE 
Sbjct: 150 ANLDSPWPKCLRLRECFQQLLAENGSREFPVKTMVEEVMTNTVKDEETELPHVFTPETEY 209

Query: 132 HLSSIFIDTERPLGRYGTRSTSSLYVKS------NGEVYFYERHLEKDL-WKEQTVAYQI 184
           HLSSIF+D +RP GRYGTRS S++ +KS      +GEV FYERHLE+   WKE    + I
Sbjct: 210 HLSSIFVDMQRPTGRYGTRSISAISIKSHGDGDGDGEVCFYERHLEEGTSWKEHNQQFVI 269

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457562|ref|XP_002272189.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region [Vitis vinifera] gi|297745560|emb|CBI40725.3| unnamed protein product [Vitis vinifera]

 Score =  199 bits (506), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 97/175 (55%), Positives = 124/175 (70%)

Query: 12  SKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTN 71
           S+K P ++AEEI  E D+YNGFNL++ +I SK+MVYV+NR EG      E+SPGIHVL+N
Sbjct: 90  SRKSPHEYAEEITKEGDEYNGFNLIVADIASKTMVYVSNRPEGEPPTIQEISPGIHVLSN 149

Query: 72  ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETES 131
           A L  PW K QRL   FKEL+ KYGE ++ +KEM ++LM D  K DE +LPHI   + E 
Sbjct: 150 AKLGIPWHKVQRLRGKFKELLGKYGESDIPIKEMIEKLMRDKVKADESMLPHICALDWEC 209

Query: 132 HLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIEK 186
             SSIF DTE  +G +GTRST++L V + GEV FYE  LEK++W E+TV Y IEK
Sbjct: 210 DQSSIFTDTETKMGHFGTRSTAALTVTATGEVTFYETCLEKEIWAEKTVNYCIEK 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083298|ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|222856428|gb|EEE93975.1| predicted protein [Populus trichocarpa]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/175 (54%), Positives = 129/175 (73%)

Query: 12  SKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTN 71
           S K P +FAE ++ +A QYNGFNL++ +I SKSMVY++NR EG   +  EVSPG+HVL+N
Sbjct: 86  STKSPKEFAEGLVKDAHQYNGFNLILADISSKSMVYLSNRPEGEPVVIQEVSPGLHVLSN 145

Query: 72  ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETES 131
           A LDSPW K QRLG   K+L+ KYGE E+ +KE+ ++LM D  K D+  LP I   + E 
Sbjct: 146 AKLDSPWHKVQRLGLNLKDLLGKYGESEIPVKEVLEKLMRDKVKADKSRLPGICSIDWEF 205

Query: 132 HLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIEK 186
           +LSSIF++ + PLG YGTRST++L + + GEV FYE +LEK++WKE TV Y+I+K
Sbjct: 206 NLSSIFVEIDTPLGCYGTRSTAALTIGAGGEVSFYEIYLEKNVWKESTVNYRIQK 260

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
TAIR|locus:2121743	275	AT4G38260 "AT4G38260" [Arabido	0.930	0.629	0.555	1.2e-49
MGI|MGI:101825	276	Tango2 "transport and golgi or	0.919	0.619	0.303	4.9e-14
TAIR|locus:2030402	266	AT1G20740 "AT1G20740" [Arabido	0.854	0.597	0.324	2.1e-13
RGD|1310348	276	Tango2 "transport and golgi or	0.930	0.626	0.276	4.2e-13
UNIPROTKB|Q74F17	256	GSU0792 "Uncharacterized prote	0.844	0.613	0.315	1.5e-12
TIGR_CMR|GSU_0792	256	GSU_0792 "conserved hypothetic	0.844	0.613	0.315	1.5e-12
UNIPROTKB|Q6ICL3	276	TANGO2 "Transport and Golgi or	0.924	0.623	0.274	6.5e-12
UNIPROTKB|Q5ZI44	276	C15H22orf25 "Uncharacterized p	0.951	0.641	0.241	5.4e-11
UNIPROTKB|F1RHN1	276	C22orf25 "Uncharacterized prot	0.924	0.623	0.259	5.4e-11
UNIPROTKB|E2RCR6	352	C22orf25 "Uncharacterized prot	0.924	0.488	0.264	9.1e-11

TAIR|locus:2121743 AT4G38260 "AT4G38260" [Arabidopsis thaliana (taxid:3702)]

 Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
 Identities = 100/180 (55%), Positives = 129/180 (71%)

Query:    12 SKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTN 71
             S+K P +FAEEI  E   YNGFNLV+ ++ SKSM+Y+TNR   G  + T+VSPGIHVL+N
Sbjct:    90 SEKSPAEFAEEIQDEISLYNGFNLVVAHVLSKSMIYITNRPPHGDKLVTQVSPGIHVLSN 149

Query:    72 ALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIYPPETES 131
             A LDSPWPK  RL   F++L+ + G GE  +K M +E+M +T KD+E  LPH++ PETE 
Sbjct:   150 ANLDSPWPKCLRLREGFQQLLAENGSGEFPVKTMVEEVMTNTVKDEETELPHVFTPETEY 209

Query:   132 HLSSIFIDTERPLGRYGTRSTSSLYVKSNG------EVYFYERHLEK-DLWKEQTVAYQI 184
             HLSSIF+D +RP GRYGTRS S++ VKS+G      E+ FYERHLE+ D WKE T  + I
Sbjct:   210 HLSSIFVDMQRPTGRYGTRSISAIIVKSHGDGGGDGEICFYERHLEEGDSWKEHTQQFVI 269

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

MGI|MGI:101825 Tango2 "transport and golgi organization 2" [Mus musculus (taxid:10090)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 57/188 (30%), Positives = 93/188 (49%)

Query:     4 SHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIH-SKSMV--YVTNRSEGGKSIAT 60
             SHF TS++     L + +++ TE   YNGFN++  ++  SK  V  Y  NR E    + T
Sbjct:    93 SHFLTSDMDS---LSYLKKVSTEGHLYNGFNIIAADLSTSKGDVVCYYGNRGEPEPIVLT 149

Query:    61 EVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGL 120
                PG + L+NALL++PW K       F E ++   + E   K++    ++D   ++E  
Sbjct:   150 ---PGTYGLSNALLETPWKKLCFGKQLFMEAVE---QSEALPKDVLVTQLLDVLNNEEAQ 203

Query:   121 LPH-IYPPETESHLSSIFIDTERPLGR---YGTRSTSSLYVKSNGEVYFYERH-LEKDLW 175
             LP      + + ++  I         R   YGTR+ + + V +NG V F ER  L+KD  
Sbjct:   204 LPDPAIEDQGQEYVQPILNKYAAVWCRCASYGTRTNTIILVDANGHVTFTERSMLDKDTS 263

Query:   176 KEQTVAYQ 183
             + +T  Y+
Sbjct:   264 RWETNTYE 271

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2030402 AT1G20740 "AT1G20740" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 59/182 (32%), Positives = 95/182 (52%)

Query:    12 SKKKPLDFAEEILTEADQYNG---FNLVIVNIHSKSMVYVTNR--SEGGKSIATEVSPGI 66
             S + P DFA+    +  +      F+L++ +I S SM+Y++    S+ G      V PG+
Sbjct:    98 SNESPEDFAKSSAADYIRNKNTAAFHLIVADIASNSMLYISKPRFSDYGIVYTEPVGPGV 157

Query:    67 HVLTNALLDSPWP-KAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHIY 125
             H L++A LDS    +  R+ H+F E++++  E    ++++A E+M D  K  E +L    
Sbjct:   158 HTLSSAGLDSDVGYRDLRMRHSFCEMINR--ERLPPIRDIA-EIMYDPVKAYESVL---- 210

Query:   126 PPETESHLSSIF-IDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLE--KDLWKEQTVAY 182
                    LSSIF +D +     YGTR T++L VK   EV F+ER+ E   D W +   A+
Sbjct:   211 -------LSSIFFVDMKIGYEHYGTRITTALVVKRTKEVLFFERYREIFNDDWDDHDFAF 263

Query:   183 QI 184
              I
Sbjct:   264 TI 265

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

RGD|1310348 Tango2 "transport and golgi organization 2 homolog (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 173 (66.0 bits), Expect = 4.2e-13, P = 4.2e-13
 Identities = 53/192 (27%), Positives = 93/192 (48%)

Query:     4 SHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKS---MVYVTNRSEGGKSIAT 60
             SHF TS++     L + +++ TE   YNGFNL+  ++ +     + Y  NR E    + T
Sbjct:    93 SHFLTSDMDS---LSYLKKVSTEGHLYNGFNLIAADLSTAKGDVVCYYGNRGEPEPIVLT 149

Query:    61 EVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGL 120
                PG + L+NALL++PW K       F E +++    E   K++    +++   ++E  
Sbjct:   150 ---PGTYGLSNALLETPWKKLCFGKQLFTEAVER---SESLPKDILVTQLLEVLNNEEAQ 203

Query:   121 LPH-IYPPETESHLSSIFIDTERPLGR---YGTRSTSSLYVKSNGEVYFYERH-LEKDL- 174
             LP      + + ++  I         R   YGTR+ + + V ++G V F ER  L+KD  
Sbjct:   204 LPDPAIEDQGQEYIQPILSKYAAVCVRSATYGTRTNTIILVDADGHVTFTERSMLDKDTS 263

Query:   175 -WKEQTVAYQIE 185
              W+  T  + ++
Sbjct:   264 CWETNTYEFTLQ 275

GO:0005739 "mitochondrion" evidence=IEA;ISO

UNIPROTKB|Q74F17 GSU0792 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 54/171 (31%), Positives = 83/171 (48%)

Query:    16 PLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLD 75
             P  + E +      YNGFNL+  +     + Y +NR     + A+ +SPGIH L+N LLD
Sbjct:    96 PSRWLEHLQRNGHDYNGFNLIFGD--GNGLHYHSNRG----AAASPLSPGIHGLSNHLLD 149

Query:    76 SPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHI-YPPETESHLS 134
             +PWPK  R   A   L+    E  +   ++   ++ + T   + LLP      + E  LS
Sbjct:   150 TPWPKVARGRDALARLLATADEPAVD--DLF-AILANRTPAPDHLLPDTGVSLDWERLLS 206

Query:   135 SIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIE 185
              +FI +  P   YGTRS++ + V  +G+  F ER         +TV Y+ E
Sbjct:   207 PLFITS--PT--YGTRSSTVILVDRSGQCTFVERSYNGAADHPRTVEYRFE 253

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|GSU_0792 GSU_0792 "conserved hypothetical protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 54/171 (31%), Positives = 83/171 (48%)

Query:    16 PLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLD 75
             P  + E +      YNGFNL+  +     + Y +NR     + A+ +SPGIH L+N LLD
Sbjct:    96 PSRWLEHLQRNGHDYNGFNLIFGD--GNGLHYHSNRG----AAASPLSPGIHGLSNHLLD 149

Query:    76 SPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPHI-YPPETESHLS 134
             +PWPK  R   A   L+    E  +   ++   ++ + T   + LLP      + E  LS
Sbjct:   150 TPWPKVARGRDALARLLATADEPAVD--DLF-AILANRTPAPDHLLPDTGVSLDWERLLS 206

Query:   135 SIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLEKDLWKEQTVAYQIE 185
              +FI +  P   YGTRS++ + V  +G+  F ER         +TV Y+ E
Sbjct:   207 PLFITS--PT--YGTRSSTVILVDRSGQCTFVERSYNGAADHPRTVEYRFE 253

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q6ICL3 TANGO2 "Transport and Golgi organization 2 homolog" [Homo sapiens (taxid:9606)]

 Score = 163 (62.4 bits), Expect = 6.5e-12, P = 6.5e-12
 Identities = 53/193 (27%), Positives = 94/193 (48%)

Query:     4 SHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKS---MVYVTNRSEGGKSIAT 60
             +HF T++V     L + +++  E   YNGFNL+  ++ +     + Y  NR E    + T
Sbjct:    93 THFLTTDVDS---LSYLKKVSMEGHLYNGFNLIAADLSTAKGDVICYYGNRGEPDPIVLT 149

Query:    61 EVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGL 120
                PG + L+NALL++PW K       F E +++    +   K++    ++D   ++E  
Sbjct:   150 ---PGTYGLSNALLETPWRKLCFGKQLFLEAVER---SQALPKDVLIASLLDVLNNEEAQ 203

Query:   121 LPHIYPPE-----TESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHL-EKDL 174
             LP     +      +  LS       R  G YGTR+ + + V ++G V F ER + +KDL
Sbjct:   204 LPDPAIEDQGGEYVQPMLSKYAAVCVRCPG-YGTRTNTIILVDADGHVTFTERSMMDKDL 262

Query:   175 --WKEQTVAYQIE 185
               W+ +T  + ++
Sbjct:   263 SHWETRTYEFTLQ 275

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q5ZI44 C15H22orf25 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 155 (59.6 bits), Expect = 5.4e-11, P = 5.4e-11
 Identities = 45/186 (24%), Positives = 89/186 (47%)

Query:     4 SHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVS 63
             ++F TS++       + +++  E   YNGFNL+  ++++     +      G      ++
Sbjct:    93 TNFLTSDLDC---YSYLKKVSVEGHLYNGFNLIAADLNTTKGDVICYYGNKGDPEPVFLN 149

Query:    64 PGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGLLPH 123
             PGI+ L+N LLD+PW K Q     F E++++    +L  +++  EL+      +  L   
Sbjct:   150 PGIYGLSNCLLDTPWKKLQYGKQLFTEVINR--SQDLAKEDLVQELLTVMNNQEPQLPDP 207

Query:   124 IYPPETESHLSSIFIDTERPLGR---YGTRSTSSLYVKSNGEVYFYERHL-EKDLWKEQT 179
                 + + ++  I         R   YGTR+ + L + S G V F ER +  +D+ + +T
Sbjct:   208 AIEDQGKEYIRPILNKYAAVCVRCPGYGTRTNTVLLIDSEGNVTFTERTMINEDVSQWKT 267

Query:   180 VAYQIE 185
              +Y+ +
Sbjct:   268 SSYEFK 273

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1RHN1 C22orf25 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 155 (59.6 bits), Expect = 5.4e-11, P = 5.4e-11
 Identities = 50/193 (25%), Positives = 91/193 (47%)

Query:     4 SHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKS---MVYVTNRSEGGKSIAT 60
             SHF T+++     L + +++  E   YNGFNL+  ++ ++    + Y  NR    K +  
Sbjct:    93 SHFLTTDMDS---LSYLKKVSKEGHLYNGFNLIAADLSTEKGDIICYYGNRGND-KPVVL 148

Query:    61 EVSPGIHVLTNALLDSPWPKAQRLGHAFKEL-MDKYGEGELQMKEMADELMMDTTKDDEG 119
             E  PG + L+NALLD+PW K    G   K+L ++  G  +   K+     ++D   ++E 
Sbjct:   149 E--PGTYGLSNALLDTPWKKLC-FG---KQLFLEAVGRSQALPKDALVAQLLDMLNNEEA 202

Query:   120 LLPHIYPPETESHLSSIFIDTERPL----GRYGTRSTSSLYVKSNGEVYFYERHL---EK 172
              LP     +        F+     +      YGTR+ + + V ++G V F ER +   + 
Sbjct:   203 QLPDPAIEDQGREYVQPFLSKYAAVCVRCSDYGTRTNTVILVDADGHVTFTERSMLGTDP 262

Query:   173 DLWKEQTVAYQIE 185
               W+  T  ++++
Sbjct:   263 SHWETTTHEFKLQ 275

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E2RCR6 C22orf25 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 156 (60.0 bits), Expect = 9.1e-11, P = 9.1e-11
 Identities = 51/193 (26%), Positives = 95/193 (49%)

Query:     4 SHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKS---MVYVTNRSEGGKSIAT 60
             +HF T+++     L + +++  E   YNGFNL+  ++ ++    + Y  NR E    +  
Sbjct:   169 AHFLTTDMDS---LSYLKKVSAEGHLYNGFNLIAADLSTEKGDVICYYGNRGEPEPVV-- 223

Query:    61 EVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGL 120
              ++PG + L+NALL++PW K       F E +++    +   K++    +++   +DE  
Sbjct:   224 -LAPGTYGLSNALLETPWRKLCFGKQLFLEAVER---SQALPKDILIAQLLNVLNNDEAQ 279

Query:   121 LPHIYPPE-----TESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERH-LEKD- 173
             LP     +      +  LS       R  G YGTR+ + + V ++G V F ER  L+KD 
Sbjct:   280 LPDPAIEDQGREYVQPFLSKYAAVCVRCPG-YGTRTNTVILVDADGHVTFTERSMLDKDP 338

Query:   174 -LWKEQTVAYQIE 185
               W+  T  ++++
Sbjct:   339 SCWETSTHEFKLQ 351

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	186
pfam05742	267	pfam05742, NRDE, NRDE protein	3e-31
COG3332	270	COG3332, COG3332, Uncharacterized conserved protei	4e-22

>gnl|CDD|218726 pfam05742, NRDE, NRDE protein

 Score =  113 bits (285), Expect = 3e-31
 Identities = 61/178 (34%), Positives = 96/178 (53%), Gaps = 20/178 (11%)

Query: 3   YSHFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSK--SMVYV-TNRSEGGKSIA 59
            + F TSN S    L++ E +   A +YNGFNLV  + +      VY  +NR E  K   
Sbjct: 87  VADFLTSNAS---ALEYLENLKKRAHEYNGFNLVAADKNKTGSDRVYYLSNRPE--KLPR 141

Query: 60  TEVSPGIHVLTNALLDSPWPKAQRLGHAFKELMDKYGE-GELQMKEMADELMMDTTK--- 115
            +++PGI+ L+N+LLD+PWPK +      +E ++   E     + +   E++ +T+    
Sbjct: 142 IQLAPGIYGLSNSLLDTPWPKVRVGRKLLEERLEASDELSVETIIQQLLEILANTSAFAP 201

Query: 116 DDEGLLPH--IYPPETESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHLE 171
           D +  LP   ++ PETE  LS+IFI       RYGTR+++ + V  +GEV F ER + 
Sbjct: 202 DAQ--LPDTGVFVPETERLLSAIFIRGP----RYGTRASTVVLVDHDGEVTFIERRMG 253

In eukaryotes this family is predicted to play a role in protein secretion and Golgi organisation. In plants this family includes Solanum habrochaites Cwp, which is involved in water permeability in the cuticles of fruit. Mouse T10 has been found to be expressed during early embryogenesis in mice. This protein contains a conserved NRDE motif. Length = 267

>gnl|CDD|225869 COG3332, COG3332, Uncharacterized conserved protein [Function unknown]

 Score = 89.6 bits (222), Expect = 4e-22
 Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 14/167 (8%)

Query: 6   FFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPG 65
           F + +  K    D+  ++   A  Y+GFNL+  + H     Y  NRSE  + +     PG
Sbjct: 94  FLSIH--KASFEDYLNQLKKRAGHYDGFNLLYGDRHKLW--YYVNRSETPRKLL----PG 145

Query: 66  IHVLTNALLDSPWPKAQRLGHAFKELMDKYGE-GELQMKEMADELMMDTTKDDEGLLPHI 124
            + L+N  LDSPWPK ++   A  EL+ +  E  E ++     +L+ D++   +G LP  
Sbjct: 146 YYGLSNGFLDSPWPKVKKARAALAELLAENIEHDEEKIISSCLQLLADSSLAPDGQLPDT 205

Query: 125 -YPPETESHLSSIFIDTERPLGRYGTRSTSSLYVKSNGEVYFYERHL 170
               E E  LS+IFI    P   YGTR+++ L V  +G V F ER  
Sbjct: 206 GVGVEWERLLSTIFI----PGPYYGTRASTVLRVSKDGTVTFIERVF 248

Length = 270

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	186
PF05742	273	NRDE: NRDE protein; InterPro: IPR008551 This famil	100.0
COG3332	270	Uncharacterized conserved protein [Function unknow	100.0
KOG2342	280	consensus Uncharacterized conserved protein [Funct	99.97
PF03417	225	AAT: Acyl-coenzyme A:6-aminopenicillanic acid acyl	85.18

>PF05742 NRDE: NRDE protein; InterPro: IPR008551 This family is found in eukaryotes, prokaryotes and viruses and has no known function

Probab=100.00  E-value=1.7e-42  Score=290.27  Aligned_cols=168  Identities=36%  Similarity=0.636  Sum_probs=141.9

Q ss_pred             ccCCCCChHHHHHHHHHhcCCCCceeEEEEEccC---CeEEEEecCCCCCCceeEEecCceEEEcCCCCCCCcHHHHHHH
Q 029871            9 SNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHS---KSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDSPWPKAQRLG   85 (186)
Q Consensus         9 ~L~s~~s~~~y~~~l~~~~~~y~gFNLvvgd~~~---~~~~y~sN~~~~~~~~~~~l~~Gv~glSN~~ld~pWpKv~~gk   85 (186)
                      +|.++.+|.+|++++..++++|+|||||+||+..   ..++|++|+....+..+..+.+|+|||||+.||+|||||.+|+
T Consensus        92 fL~~~~~~~~~~~~l~~~~~~y~gFnLv~~d~~~~~~~~~~~~sn~~~~~~~~~~~l~~g~hglSN~~ld~pWpKv~~gk  171 (273)
T PF05742_consen   92 FLTSNASPEEYLEELAKEAHDYNGFNLVVGDLSKTGGSELYYYSNRGDKDPIVIEELPPGVHGLSNSLLDTPWPKVERGK  171 (273)
T ss_pred             hhccCccHHHHHHHHHHhcCccCCEEEEEEEcccCCcceEEEEEeccCCCCceeEEccCCceEEcCCCCCCCccchhHHH
Confidence            4566889999999999999999999999999972   3689999998864444568999999999999999999999999


Q ss_pred             HHHHHHHHhhCCCCCCHHHHH---HHHhhcc-CCCCCCCCCCC-CCC-Cccc--cccceeeeCCCCCCccccceEEEEEE
Q 029871           86 HAFKELMDKYGEGELQMKEMA---DELMMDT-TKDDEGLLPHI-YPP-ETES--HLSSIFIDTERPLGRYGTRSTSSLYV  157 (186)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~l~---~~ll~d~-~~~~~~~lPdt-~~~-~~e~--~lssifI~~~~~~~~YGTRssTvIlV  157 (186)
                      +.|++++++..  +.+.++++   .++|+|. ..+++..+|++ ++. ++++  .||+|||..+    .|||||||||+|
T Consensus       172 ~~l~~~~~~~~--~~~~~~l~~~l~~~L~~~~~~~~d~~l~~~g~~~~~~~~~~~lssifi~~~----~YGTRssTvIlv  245 (273)
T PF05742_consen  172 QLLEEILEQSN--ESSEEELIEELFELLSDDTQCAPDEQLPDTGIGLPELERPINLSSIFIRGP----YYGTRSSTVILV  245 (273)
T ss_pred             HHHHHHHhccc--CCCHHHHHHHHHHHhcCCCcCCChhHccccCCCcchhhhhcccccccccCC----CccCeeEEEEEE
Confidence            99999998643  23445554   4567666 45677788888 544 7777  8999999988    999999999999


Q ss_pred             EeCCeEEEEEEEecC-C--cceEEEEEE
Q 029871          158 KSNGEVYFYERHLEK-D--LWKEQTVAY  182 (186)
Q Consensus       158 ~~~g~v~f~Er~~~~-~--~w~~~~~~F  182 (186)
                      +++|+|+|+||+|.. +  +|++++|+|
T Consensus       246 d~~g~v~f~Er~~~~~~~~~w~~~~f~f  273 (273)
T PF05742_consen  246 DRDGKVTFIERTLDDSGASEWEEQRFEF  273 (273)
T ss_pred             ecCCCEEEEEEEecCCCCccceeeEEeC
Confidence            999999999999943 3  699999998

P54797 from SWISSPROT has been found to be expressed during early embryogenesis in Mus sp [].

>COG3332 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=8.3e-39  Score=254.71  Aligned_cols=154  Identities=34%  Similarity=0.546  Sum_probs=135.6

Q ss_pred             ccccccccCCC-CChHHHHHHHHHhcCCCCceeEEEEEccCCeEEEEecCCCCCCceeEEecCceEEEcCCCCCCCcHHH
Q 029871            3 YSHFFTSNVSK-KKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDSPWPKA   81 (186)
Q Consensus         3 ~~~~~~~L~s~-~s~~~y~~~l~~~~~~y~gFNLvvgd~~~~~~~y~sN~~~~~~~~~~~l~~Gv~glSN~~ld~pWpKv   81 (186)
                      |+|||+   ++ .|+++|++++.+.++.|+||||++||..  .++|++||...    .+.+.||+|||||+.+|+|||||
T Consensus        91 v~dfL~---~~~as~~~~l~qlk~~~g~ydGfNll~gd~~--~l~y~~nr~e~----~rkl~pgyy~lSNg~lds~W~Kv  161 (270)
T COG3332          91 VADFLS---IHKASFEDYLNQLKKRAGHYDGFNLLYGDRH--KLWYYVNRSET----PRKLLPGYYGLSNGFLDSPWPKV  161 (270)
T ss_pred             HHHHHH---hcCCCHHHHHHHHHhhhccccceeeEeeehh--heeEecccccc----ccccCCceEEeccccccCccHHH
Confidence            345554   44 6899999999999999999999999996  78999999763    46899999999999999999999


Q ss_pred             HHHHHHHHHHHHhhCCCCCCHHHHH---HHHhhccCCCCCCCCCCC-CCCCccccccceeeeCCCCCCccccceEEEEEE
Q 029871           82 QRLGHAFKELMDKYGEGELQMKEMA---DELMMDTTKDDEGLLPHI-YPPETESHLSSIFIDTERPLGRYGTRSTSSLYV  157 (186)
Q Consensus        82 ~~gk~~~~~~~~~~~~~~~~~~~l~---~~ll~d~~~~~~~~lPdt-~~~~~e~~lssifI~~~~~~~~YGTRssTvIlV  157 (186)
                      .+.+..|++++.+..+.  +.+.++   .+||+|...+++.++||| ++.+||+.||+|||+.|    .||||+||||+|
T Consensus       162 ~~araal~~~l~e~~~~--d~e~ii~~~l~llad~~~~p~~qlPdtgv~~ewerlls~ifI~g~----~YGTRastVl~v  235 (270)
T COG3332         162 KKARAALAELLAENIEH--DEEKIISSCLQLLADSSLAPDGQLPDTGVGVEWERLLSTIFIPGP----YYGTRASTVLRV  235 (270)
T ss_pred             HHHHHHHHHHHhccccC--cHHHHHHHHHHHHhccccCCccCCCcccccccHhhhheeeeecCC----CcccceeEEEEE
Confidence            99999999999875333  444444   467888889999999999 88999999999999999    999999999999


Q ss_pred             EeCCeEEEEEEEec
Q 029871          158 KSNGEVYFYERHLE  171 (186)
Q Consensus       158 ~~~g~v~f~Er~~~  171 (186)
                      .++|.++|+||.+.
T Consensus       236 ~~dgt~~fiEr~~~  249 (270)
T COG3332         236 SKDGTVTFIERVFG  249 (270)
T ss_pred             ecCCeeEEEEeecC
Confidence            99999999999993

>KOG2342 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.97  E-value=4.5e-30  Score=209.78  Aligned_cols=179  Identities=32%  Similarity=0.451  Sum_probs=138.8

Q ss_pred             ccccccCCCCChHHHHHHHHHhcCCCCceeEEEEEccCCeEEEEecCCCCC--CceeEEecCceEEEcCCCCCCCcHHHH
Q 029871            5 HFFTSNVSKKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGG--KSIATEVSPGIHVLTNALLDSPWPKAQ   82 (186)
Q Consensus         5 ~~~~~L~s~~s~~~y~~~l~~~~~~y~gFNLvvgd~~~~~~~y~sN~~~~~--~~~~~~l~~Gv~glSN~~ld~pWpKv~   82 (186)
                      .||.+|+|..++.++++.+..++..|||||||++|+.+..|++++.....+  .++++++.+|+|.+||+++-.||-|+.
T Consensus        89 ~~le~l~S~~d~ak~~e~~~~~~~~~ngF~lvvadv~ss~m~~i~~p~~~dv~~v~v~~~~~~~hv~Sn~~p~~~~~ks~  168 (280)
T KOG2342|consen   89 LFLEFLSSPEDFAKFFEGHYDEASKYNGFNLVVADVNSSSMVIISKPRNQDVDVVEVEPVGDGVHVLSNSPPYDPWLKSE  168 (280)
T ss_pred             chhhhccCcchHHHHHHHHhhhhhccCceEEEEEEeccceEEEEecCCccccceEEEEecCCeeEEecCCCCCccccchh
Confidence            478889988888888889988999999999999999855566665544432  345677899999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCCCCCHHHHHHHHhhccCCCCCCC-CCCCC------CCCccccccceeeeCCC-CCCccccceEEE
Q 029871           83 RLGHAFKELMDKYGEGELQMKEMADELMMDTTKDDEGL-LPHIY------PPETESHLSSIFIDTER-PLGRYGTRSTSS  154 (186)
Q Consensus        83 ~gk~~~~~~~~~~~~~~~~~~~l~~~ll~d~~~~~~~~-lPdt~------~~~~e~~lssifI~~~~-~~~~YGTRssTv  154 (186)
                      .|++.|++++.....+  +.+.+..+++. ..+.-... .+|++      .+..-..||+||+..|. +...|||||+|+
T Consensus       169 ~g~~~L~~~~l~~~~~--~ve~i~~~~~~-~a~~~a~~~m~d~v~~~~~~~~~~~~plssif~~d~~~~t~~YGTRs~ta  245 (280)
T KOG2342|consen  169 VGRRDLRELRLFTDEQ--SVEQINESLFE-PAKKIAEEFMYDTVQAQDGNVEIYVPPLSSIFFVDPEIGTRRYGTRSTTA  245 (280)
T ss_pred             HHHHHHHHHHhcchhh--HHHHHhhhhhh-hhhhhhhhcCchhhhhhcCCCccccccccccceecCcccccccccceEEE
Confidence            9999999998754322  45666666665 32223323 33442      12334678999887763 245899999999


Q ss_pred             EEEEeCCeEEEEEEEec--CCcceEEEEEEEecC
Q 029871          155 LYVKSNGEVYFYERHLE--KDLWKEQTVAYQIEK  186 (186)
Q Consensus       155 IlV~~~g~v~f~Er~~~--~~~w~~~~~~F~l~~  186 (186)
                      |+|+++|+|+|+||+|+  ++.|.++.|.|.|++
T Consensus       246 lvVk~t~eV~f~ER~le~~~~~W~~~~f~F~i~~  279 (280)
T KOG2342|consen  246 LVVKRTGEVTFFERYLEPFNDTWHDHDFAFKIIL  279 (280)
T ss_pred             EEEecCCeEEEEeehhhhhcCccccCceEEEEec
Confidence            99999999999999994  699999999999864

>PF03417 AAT: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase This family belongs to family C45 of the peptidase classification

Probab=85.18  E-value=18  Score=28.95  Aligned_cols=95  Identities=17%  Similarity=0.149  Sum_probs=51.1

Q ss_pred             CCChHHHHHHHHHhcCCCCceeEEEEEccCCeEEEEecCCCCCCceeEEecCceEEEcCCCCCC--------CcHHHHHH
Q 029871           13 KKKPLDFAEEILTEADQYNGFNLVIVNIHSKSMVYVTNRSEGGKSIATEVSPGIHVLTNALLDS--------PWPKAQRL   84 (186)
Q Consensus        13 ~~s~~~y~~~l~~~~~~y~gFNLvvgd~~~~~~~y~sN~~~~~~~~~~~l~~Gv~glSN~~ld~--------pWpKv~~g   84 (186)
                      ..|..+.++-|. +.....++|++++|.+.+.+.+....... .. ...=.+|...-+|..+..        +.+.-..=
T Consensus        84 ~~t~~eA~~~l~-~~~~~~~~n~~i~d~~g~~~~~E~~~~~~-~~-~~~~~~~~l~hTNH~~~~~~~~~~~~~~~~S~~R  160 (225)
T PF03417_consen   84 CRTVEEAIAILR-SAPRASSSNYLIADASGEAAVVEESPDGV-VA-VVRPGNGFLVHTNHFLSPELKAWEDRPTPSSLFR  160 (225)
T ss_dssp             -SSHHHHHHCHH-CCTTCSSSEEEEEEETTEEEEEEEETTCE-EE-EEEETTCEEEE-SS-S-GGCTSSB-S--CHHHHH
T ss_pred             CCCHHHHHHHHH-hcCcccceEEEEEecCCCEEEEEEecCCc-eE-EEEcCCCcEEEccCCCcccchhccCCCCCCcHhH
Confidence            556677766554 45778899999999874333344444321 01 111234899999987542        23444433


Q ss_pred             HHHHHHHHHhhCCCCCCHHHHHHHHhhccCC
Q 029871           85 GHAFKELMDKYGEGELQMKEMADELMMDTTK  115 (186)
Q Consensus        85 k~~~~~~~~~~~~~~~~~~~l~~~ll~d~~~  115 (186)
                      ..+++++++...    .. +.+.++|+|...
T Consensus       161 ~~r~~~ll~~~~----~~-~~~~~~l~D~~~  186 (225)
T PF03417_consen  161 YARLEELLAAQN----GK-EDIKEILSDHED  186 (225)
T ss_dssp             HHHHHHHHCCSS----SB-HHHHHHCT--TT
T ss_pred             HHHHHHHHhccc----CH-HHHHHHhcCccC
Confidence            566777776532    22 456688987653

; InterPro: IPR005079 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to MEROPS peptidase family C45 (clan PB(C)). The active site residue for members of this family and family T1 is C-terminal to the autolytic cleavage site. They represent a family of enzymes which catalyse the final step in penicillin biosynthesis []. ; GO: 0042318 penicillin biosynthetic process; PDB: 3GVZ_A 2X1D_D 2X1E_B 2X1C_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00