Citrus Sinensis ID: 029912

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-----
Protein Sequence
MKNCRGSTCIFCVLLLAMLAGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDREVTPFGIKHKRKVLTLKP
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHccccccccccccccccEEEEEEccccccccccccEEEEEEcccccEEEEEcccccccccccccccccccccccccccccccccEEEEccccccccEEEEEEEccccccEEEEEEEEEEcccccccEEEEEEEEcccccccEEcccccccccccccccEEEEcccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEEccccccccccEEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEEcccccccccEEEEEEccccccccEEEEEcccccccEEEEccccccccccEEEcccEEEEcccc
Coil and Loop (DISEMBL)
mkncrgstCIFCVLLLAMLaggdegapksknkenctYAVTIETTctkgaetsnpvslrfgdtksTDILVKHLnskhvrqvdplwptvlddvprkpfqacnvdefqvtgpcvvspICYLYLKlggeddwrpgfAQVRVLegshhsseyfyfrrylprhvwhgsdicdrevtpfgikhkrkvltlkp
Flexible Loop (DISEMBL)
MKNCRGSTCIFCVLLLAMLAGGdegapksknkencTYAVTIEttctkgaetsnpvslrfgdTKSTDILVKHlnskhvrqvdplWPTVLDDVPRKPFQACNVdefqvtgpcvvSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDIcdrevtpfgikhkrkvltlkp
Low Complexity Region (SEG)
MKNCRGSTCIFCVLLLAMLAGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDREVTPFGIKHKRKVLTLKP
Disordered region (IsUnstruct)
*****GSTCIFCVLLLAMLAGG***********NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDREVTPFGIKHKRK******
Disordered Region (DISOPRED)
*****GS*CIFCVLLLAMLA**************CTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDRE**********KVLTL**
Disordered Region (DISEMBL)
MKNCRGSTCIFCVLLLAMLAGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDREVTPFGIKHKRKVLTLKP
Disordered Region (DISPRO)
*KNCRGSTCIFCVLLLAMLAGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDREVTPFGIKHKRKVLTL**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKNCRGSTCIFCVLLLAMLAGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDREVTPFGIKHKRKVLTLKP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	185
225435149	199	PREDICTED: uncharacterized protein LOC10	0.983	0.914	0.680	5e-70
356567917	188	PREDICTED: uncharacterized protein LOC10	0.972	0.957	0.683	1e-67
255584162	160	conserved hypothetical protein [Ricinus	0.816	0.943	0.803	2e-67
357505503	188	hypothetical protein MTR_7g060450 [Medic	0.989	0.973	0.689	6e-67
356524551	180	PREDICTED: uncharacterized protein LOC10	0.913	0.938	0.666	8e-62
449461027	180	PREDICTED: uncharacterized protein LOC10	0.805	0.827	0.744	6e-60
116781160	199	unknown [Picea sitchensis]	0.729	0.678	0.42	2e-23
255568183	183	conserved hypothetical protein [Ricinus	0.697	0.704	0.444	7e-22
224112913	184	predicted protein [Populus trichocarpa]	0.8	0.804	0.352	8e-20
147845107	188	hypothetical protein VITISV_012438 [Viti	0.762	0.75	0.340	4e-18

>gi|225435149|ref|XP_002281716.1| PREDICTED: uncharacterized protein LOC100255372 [Vitis vinifera] gi|147789067|emb|CAN60349.1| hypothetical protein VITISV_005803 [Vitis vinifera] gi|297746167|emb|CBI16223.3| unnamed protein product [Vitis vinifera]

 Score =  268 bits (686), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 130/191 (68%), Positives = 151/191 (79%), Gaps = 9/191 (4%)

Query: 1   MKNCRGSTCIFCVLLLAM------LAGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNP 54
           MK+C+    +FCVL +A       LA G+   P+ K  +NCTY VT+ETTCT GA+TSN 
Sbjct: 3   MKHCK-EISVFCVLFIAFGADTLGLAVGESLTPEMK--KNCTYVVTVETTCTNGADTSNH 59

Query: 55  VSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSP 114
           VS+RFGDT S D++V+HLN+KHV ++DPL P  LDD P KPFQAC VDEFQ+TG CV SP
Sbjct: 60  VSIRFGDTNSNDVVVQHLNTKHVTRLDPLKPAGLDDTPIKPFQACTVDEFQLTGQCVESP 119

Query: 115 ICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDREVTPFGI 174
           ICYLYLKL G DDWRPGFAQ+RVLEG H SSEYFYFRRYLPRHVWHGSD+CDREVTPFGI
Sbjct: 120 ICYLYLKLIGTDDWRPGFAQIRVLEGDHLSSEYFYFRRYLPRHVWHGSDVCDREVTPFGI 179

Query: 175 KHKRKVLTLKP 185
           +HKR+V   KP
Sbjct: 180 RHKRRVFGKKP 190

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567917|ref|XP_003552161.1| PREDICTED: uncharacterized protein LOC100814114 [Glycine max]

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 123/180 (68%), Positives = 142/180 (78%)

Query: 6   GSTCIFCVLLLAMLAGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKST 65
           G   I C +LL +L    E     + K+NCTY +TIETTCT GAETSN VSLRFGDT S 
Sbjct: 9   GRQLICCCVLLHVLVARGESLEAPEFKKNCTYVITIETTCTWGAETSNLVSLRFGDTNSN 68

Query: 66  DILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGE 125
            ILV+HLNSKH+R+VDPL P VLDD+PRKPFQAC VD+F+VT PCV SPICYL+LKL G 
Sbjct: 69  AILVRHLNSKHLRKVDPLEPEVLDDMPRKPFQACMVDQFEVTAPCVNSPICYLFLKLIGN 128

Query: 126 DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDREVTPFGIKHKRKVLTLKP 185
           DDWRPGFAQ++VLEGSH SS+YFYFRR++PRHVWHGSD+CD EVTPFG+K KR      P
Sbjct: 129 DDWRPGFAQIQVLEGSHLSSDYFYFRRFVPRHVWHGSDVCDSEVTPFGLKKKRNAYVNIP 188

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584162|ref|XP_002532821.1| conserved hypothetical protein [Ricinus communis] gi|223527441|gb|EEF29578.1| conserved hypothetical protein [Ricinus communis]

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 123/153 (80%), Positives = 135/153 (88%), Gaps = 2/153 (1%)

Query: 34  NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPR 93
           NCTYA+TI TTCT GA T++ VSLRFGDTKS DI+V HLNSKHVR++DPL P VLDD+PR
Sbjct: 5   NCTYAITIATTCTMGAGTADHVSLRFGDTKSDDIVVHHLNSKHVRKLDPLQPEVLDDMPR 64

Query: 94  KPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVL--EGSHHSSEYFYFR 151
           +PFQAC VD+FQVTG CV SPICYLYLKL G+DDWRPGFAQVRVL  EGSH SS+YFYFR
Sbjct: 65  RPFQACMVDQFQVTGQCVDSPICYLYLKLAGKDDWRPGFAQVRVLEMEGSHLSSDYFYFR 124

Query: 152 RYLPRHVWHGSDICDREVTPFGIKHKRKVLTLK 184
           RYLPRHVWHGSD+CDREVTPFGIKHKRKV   K
Sbjct: 125 RYLPRHVWHGSDLCDREVTPFGIKHKRKVFARK 157

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357505503|ref|XP_003623040.1| hypothetical protein MTR_7g060450 [Medicago truncatula] gi|358345005|ref|XP_003636575.1| hypothetical protein MTR_046s0014 [Medicago truncatula] gi|355498055|gb|AES79258.1| hypothetical protein MTR_7g060450 [Medicago truncatula] gi|355502510|gb|AES83713.1| hypothetical protein MTR_046s0014 [Medicago truncatula]

 Score =  258 bits (660), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 129/187 (68%), Positives = 146/187 (78%), Gaps = 4/187 (2%)

Query: 1   MKNCRGSTCIFCVLLLAMLAGGDEG--APKSKNKENCTYAVTIETTCTKGAETSNPVSLR 58
           +KN  G   +FC +L  +L  G E   A   + K+NCTY +TIETTCT GAETSN VSLR
Sbjct: 4   LKN-NGGHFLFCCVLFQILVAGCESLEAVAPQQKKNCTYVITIETTCTWGAETSNRVSLR 62

Query: 59  FGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYL 118
           FG T S++ILV+HLN KH+RQVDPL P VLDD+PRKPFQAC VD+F VT PCV SPICYL
Sbjct: 63  FGGTNSSEILVRHLNIKHLRQVDPLEPEVLDDIPRKPFQACMVDQFVVTAPCVESPICYL 122

Query: 119 YLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDREVTPFGIKHKR 178
           YLKL G DDWRPG+AQV+VLEGSH SS  FYFRRYLPRHVWHGSD+CD EVTPFG+K KR
Sbjct: 123 YLKLFGNDDWRPGYAQVQVLEGSHLSSNNFYFRRYLPRHVWHGSDVCDSEVTPFGLK-KR 181

Query: 179 KVLTLKP 185
           KV    P
Sbjct: 182 KVHVENP 188

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524551|ref|XP_003530892.1| PREDICTED: uncharacterized protein LOC100794871 [Glycine max]

 Score =  241 bits (616), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 120/180 (66%), Positives = 138/180 (76%), Gaps = 11/180 (6%)

Query: 1   MKNCRGSTCIFCVLLLAMLAGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFG 60
           MK+  G     CVLL  ++AGG E     + K+NCTY +TIETTCT GAETSN VSLRFG
Sbjct: 6   MKSIGGHLICCCVLLQVLVAGG-ESLEAPELKKNCTYVITIETTCTWGAETSNIVSLRFG 64

Query: 61  DTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYLYL 120
           DT S  ILV+HLNSKH+R+VDPL P VLDD+PRKPF          T PCV SPICYLYL
Sbjct: 65  DTNSNVILVRHLNSKHLRKVDPLEPEVLDDMPRKPF----------TAPCVNSPICYLYL 114

Query: 121 KLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDICDREVTPFGIKHKRKV 180
           KL G DDWRPGFAQ++VLEGSH +S+YFYFRR++PRHVWHGSD+CD EVTPFG+K KR V
Sbjct: 115 KLIGNDDWRPGFAQIQVLEGSHLNSDYFYFRRFVPRHVWHGSDVCDSEVTPFGLKKKRNV 174

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461027|ref|XP_004148245.1| PREDICTED: uncharacterized protein LOC101220613 [Cucumis sativus]

 Score =  235 bits (600), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 111/149 (74%), Positives = 122/149 (81%)

Query: 32  KENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDV 91
           ++NC YAVT+ET+CTKGA+TSN VSLRFGDT S DI+V+ LN KHVR+VDPL P VLDDV
Sbjct: 32  QKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDV 91

Query: 92  PRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFR 151
            RKPFQ C VD+FQVTG CV SPICYLYLKL G DDWRPGF QVR L+G H SS YFYFR
Sbjct: 92  SRKPFQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFR 151

Query: 152 RYLPRHVWHGSDICDREVTPFGIKHKRKV 180
           R LPRHVWHG D C  EVTPFG+K  RKV
Sbjct: 152 RVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116781160|gb|ABK21987.1| unknown [Picea sitchensis]

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 84/150 (56%), Gaps = 15/150 (10%)

Query: 29  SKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVL 88
            + K NC+YAV IETTC   AET++ V +RFGD      L  H+ + H++   P++   L
Sbjct: 42  GQQKGNCSYAVEIETTCAPSAETADQVGVRFGDP-----LGNHVVAAHLKHPAPVFNPGL 96

Query: 89  DD-------VPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGS 141
                    V  K F  C +D F+V GPC+   ICYLYLK  G DDWRPG+A+V      
Sbjct: 97  GHQKQGGTHVQYKAFDRCAIDRFEVEGPCMQRGICYLYLKRVGADDWRPGWAKVLCKHKD 156

Query: 142 ---HHSSEYFYFRRYLPRHVWHGSDICDRE 168
                +S+ FYFR +LP +VW G D CD +
Sbjct: 157 GLLAPASDMFYFRTFLPSNVWFGFDYCDTD 186

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568183|ref|XP_002525067.1| conserved hypothetical protein [Ricinus communis] gi|223535648|gb|EEF37314.1| conserved hypothetical protein [Ricinus communis]

 Score =  108 bits (271), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 79/135 (58%), Gaps = 6/135 (4%)

Query: 35  CTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRK 94
           C+Y++ IETTC   A+T + VS RF D+    I+VKHL  K+ + V P            
Sbjct: 35  CSYSIEIETTCAPSADTKDHVSARFSDSSGNLIIVKHL--KNPKLVYPPNGLRKQGGVYG 92

Query: 95  PFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSH----HSSEYFYF 150
            F  C VD F+V+GPC+   IC LYLK  G D+WRPG+ +V   EGS+      S  FYF
Sbjct: 93  GFGRCAVDMFEVSGPCMKQSICSLYLKKVGSDNWRPGWVKVLHQEGSNGHLVQVSYMFYF 152

Query: 151 RRYLPRHVWHGSDIC 165
           RR+LP +VW+G D C
Sbjct: 153 RRFLPENVWYGFDYC 167

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112913|ref|XP_002316328.1| predicted protein [Populus trichocarpa] gi|222865368|gb|EEF02499.1| predicted protein [Populus trichocarpa]

 Score =  102 bits (253), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 5/153 (3%)

Query: 16  LAMLAGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSK 75
           L +L        +  + +NC+Y++ IETTC   AET + +S+RF D+    I+VKHL + 
Sbjct: 19  LGILNQATNVTFQGSSSKNCSYSIEIETTCAPSAETKDHISVRFSDSAGNLIIVKHLKNP 78

Query: 76  HVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQV 135
            +      +           F+ C +D F+ +G C+   +C LYLK  G DDWRPG+ +V
Sbjct: 79  KLLYAPKGFKK--QGGAYGGFERCAIDLFEASGTCMKQSVCSLYLKKVGTDDWRPGWVKV 136

Query: 136 RVLEGSHH---SSEYFYFRRYLPRHVWHGSDIC 165
              E S      S  FYFR ++P +VW+G D C
Sbjct: 137 LHQESSGALVPVSYVFYFRTFVPENVWYGLDYC 169

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147845107|emb|CAN81623.1| hypothetical protein VITISV_012438 [Vitis vinifera]

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 35/176 (19%)

Query: 10  IFCVLLLAMLAGGDEGAPKS----KNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKST 65
           IF  ++    +  D   P S     +  NC+Y++ IETTC   AET++ +S+RF D    
Sbjct: 13  IFLTIVTITSSAADRLQPTSHVLQASPGNCSYSIEIETTCAPSAETTDRISVRFSDMAGN 72

Query: 66  DILVKHLNSKHVRQVDPLWPTVLDDVPR---------KPFQACNVDEFQVTGPCVVSPIC 116
            ++VKHL +          P +L   PR           FQ C +D F+ +G C+   +C
Sbjct: 73  LVIVKHLKN----------PKLL-YAPRGMKNPGGVYGGFQRCAIDMFEASGACMSXIVC 121

Query: 117 YLYLKLGGEDDWRPGFAQV-------RVLEGSHHSSEYFYFRRYLPRHVWHGSDIC 165
            LYLK  G D WRPG+  V       R+   SH     FYFR ++P +VW+G D C
Sbjct: 122 SLYLKKFGSDGWRPGWVXVLHRWDDGRLAPVSHT----FYFRTFVPENVWYGFDYC 173

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	185
TAIR|locus:2167908	190	AT5G62200 "AT5G62200" [Arabido	0.681	0.663	0.318	7.9e-14
TAIR|locus:4515102981	179	AT2G41475 "AT2G41475" [Arabido	0.405	0.418	0.379	1.9e-12
TAIR|locus:2182865	213	ATS3 "AT5G07190" [Arabidopsis	0.648	0.563	0.297	1.4e-09
TAIR|locus:2167928	223	AT5G62210 "AT5G62210" [Arabido	0.389	0.322	0.342	3.3e-07

TAIR|locus:2167908 AT5G62200 "AT5G62200" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 49/154 (31%), Positives = 67/154 (43%)

Query:    35 CTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRK 94
             C Y V I T+C+    T + +S+ FGD     I    L                DD   K
Sbjct:    48 CAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPRL----------------DDPSTK 91

Query:    95 PFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEY-FYFRRY 153
              F+ C+ D FQ+ GPC    ICY+YL   G D W P   ++     SH S    F +  Y
Sbjct:    92 TFEQCSSDTFQINGPCTYQ-ICYVYLYRSGPDGWIPNTVKIY----SHGSKAVTFPYNTY 146

Query:   154 LPRHVWHGSDIC----DREVTPFGIKHKRKVLTL 183
             +P  VW+G + C    D  V   G++  R V+ L
Sbjct:   147 VPESVWYGFNYCNSASDSNVLAIGLR--RSVIIL 178

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

TAIR|locus:4515102981 AT2G41475 "AT2G41475" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query:    88 LDDVPRKPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEY 147
             LDD   + F+ C+ D ++++GPC+   +CYLYL   G D W+P    V++  GS   S  
Sbjct:    85 LDDPSSRTFEKCSSDTYKISGPCM-RDVCYLYLLRQGSDGWKP--ENVKIY-GSSIRSVT 140

Query:   148 FYFRRYLPRHVWHGSDICD 166
             FY+  +LP  VW+G ++C+
Sbjct:   141 FYYNLFLPNSVWYGFNVCN 159

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2182865 ATS3 "AT5G07190" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 41/138 (29%), Positives = 60/138 (43%)

Query:    35 CTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRK 94
             C Y V + T+C     T + +S+ FGD     +    L    VR      P  L      
Sbjct:    34 CPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGL-VRG-----PGGLGK---- 83

Query:    95 PFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYL 154
                 C+ + FQV G C+  PIC LY+   G D W P   ++   EGS   S  F F + +
Sbjct:    84 ----CSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEI-YSEGS--KSVKFDFSKSV 136

Query:   155 PR-HVWHGSDICDREVTP 171
             P+ + W+G + C+    P
Sbjct:   137 PQLNTWYGHNNCNTTGRP 154

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;TAS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2167928 AT5G62210 "AT5G62210" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 3.3e-07, P = 3.3e-07
 Identities = 26/76 (34%), Positives = 42/76 (55%)

Query:    96 FQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLP 155
             F+ C+ D FQV G C+ + IC +Y+   G D W P   ++   EGS   S  F F + +P
Sbjct:    87 FEKCSSDTFQVKGKCL-NTICSVYIYRSGTDGWIPETVEI-YKEGS--KSVKFDFNKNVP 142

Query:   156 RHVWHGSDICDREVTP 171
              ++W+G++ C+    P
Sbjct:   143 ENIWYGNNYCNNTDLP 158


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.139   0.451    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      185       185   0.00080  110 3  11 22  0.42    32
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  183 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.20u 0.09s 16.29t   Elapsed:  00:00:02
  Total cpu time:  16.20u 0.09s 16.29t   Elapsed:  00:00:02
  Start:  Fri May 10 00:16:53 2013   End:  Fri May 10 00:16:55 2013

GO:0003674 "molecular_function" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0080167 "response to karrikin" evidence=IEP

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	185
pfam06232	126	pfam06232, ATS3, Embryo-specific protein 3, (ATS3)	5e-41
cd00113	116	cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, A	4e-08
cd01754	129	cd01754, PLAT_plant_stress, PLAT/LH2 domain of pla	0.004

>gnl|CDD|218949 pfam06232, ATS3, Embryo-specific protein 3, (ATS3)

 Score =  134 bits (339), Expect = 5e-41
 Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 19/132 (14%)

Query: 34  NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPR 93
           +C+Y V I+T+C+  A T++ +S+ FGD     + V  L+       DP           
Sbjct: 14  SCSYTVIIKTSCSSPAYTTDQISIAFGDAYGNQVYVPRLD-------DPSSGGG------ 60

Query: 94  KPFQACNVDEFQVTGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRY 153
             F+ C  D FQV+GPC   PICYLYL   G D W P    +    G  +    FYF  +
Sbjct: 61  --FERCTTDTFQVSGPC-TYPICYLYLYRSGTDGWIPETVTI---YGYGYPPVTFYFNTF 114

Query: 154 LPRHVWHGSDIC 165
           LP  VW+G + C
Sbjct: 115 LPEGVWYGFNYC 126

Family of plant seed-specific proteins. Length = 126

>gnl|CDD|238061 cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

 Score = 49.3 bits (118), Expect = 4e-08
 Identities = 30/135 (22%), Positives = 44/135 (32%), Gaps = 25/135 (18%)

Query: 35  CTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRK 94
           C Y VTI+T   KGA T + +SL           +  L                D     
Sbjct: 1   CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPIL----------------DGPGS- 43

Query: 95  PFQACNVDEFQVTGPCVVSPICYLYL---KLGGEDDWRPGFAQVRVL-EGSHHSSEYFYF 150
            F+  + D FQ+     +  I  +YL     G  D W      + V   G+      F  
Sbjct: 44  -FERGSTDTFQIDLKLDIGDITKVYLRRDGSGLSDGWYC--ESITVQALGTKKVYT-FPV 99

Query: 151 RRYLPRHVWHGSDIC 165
            R++    W+ S   
Sbjct: 100 NRWVLGGKWYTSVRS 114

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. Length = 116

>gnl|CDD|238852 cd01754, PLAT_plant_stress, PLAT/LH2 domain of plant-specific single domain protein family with unknown function

 Score = 35.6 bits (82), Expect = 0.004
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 10/86 (11%)

Query: 35  CTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRK 94
           C Y + ++T     A T + +SL+  D     + + +L +         W   L      
Sbjct: 1   CVYTIYVQTGSIWKAGTDSRISLQIYDADGPGLRIANLEA---------WGG-LMGAGHD 50

Query: 95  PFQACNVDEFQVTGPCVVSPICYLYL 120
            F+  N+D F   GPC+ SP C++ L
Sbjct: 51  YFERGNLDRFSGRGPCLPSPPCWMNL 76

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins. Length = 129

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	185
PF06232	125	ATS3: Embryo-specific protein 3, (ATS3); InterPro:	100.0
cd01754	129	PLAT_plant_stress PLAT/LH2 domain of plant-specifi	99.93
cd00113	116	PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin	99.91
cd01753	113	PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u	99.87
cd01752	120	PLAT_polycystin PLAT/LH2 domain of polycystin-1 li	99.85
cd01756	120	PLAT_repeat PLAT/LH2 domain repeats of family of p	99.85
cd02899	109	PLAT_SR Scavenger receptor protein. A subfamily of	99.78
smart00308	105	LH2 Lipoxygenase homology 2 (beta barrel) domain.	99.75
PF01477	113	PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg	99.71
cd01757	114	PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter	99.55
cd01755	120	PLAT_lipase PLAT/ LH2 domain present in connection	98.64
cd01758	137	PLAT_LPL PLAT/ LH2 domain present in lipoprotein l	98.02
cd01759	113	PLAT_PL PLAT/LH2 domain of pancreatic triglyceride	93.05
TIGR03230	442	lipo_lipase lipoprotein lipase. Members of this pr	85.67
COG3354	154	FlaG Putative archaeal flagellar protein G [Cell m	81.41

>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress)

Probab=100.00  E-value=1e-49  Score=314.68  Aligned_cols=116  Identities=42%  Similarity=0.906  Sum_probs=109.8

Q ss_pred             CCCCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCC-CCCcCCceeeeeeec
Q 029912           30 KNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPR-KPFQACNVDEFQVTG  108 (185)
Q Consensus        30 ~~~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~-~~FErcs~D~F~v~G  108 (185)
                      +++++|+|+|+|||||+++|+|+|+|||+|+|++||+|+++                .||+|.+ ++||||++|+|+|+|
T Consensus         9 ~~~~~CsYtv~IkTsC~s~a~T~d~Isi~FgDa~Gn~v~~~----------------~Ld~p~~~~~FErCs~DtF~v~G   72 (125)
T PF06232_consen    9 QQAGSCSYTVTIKTSCSSPAGTDDQISIAFGDAYGNQVYVP----------------RLDDPGSGDTFERCSTDTFQVTG   72 (125)
T ss_pred             hcCCCCcEEEEEEeCcCCCcCCcceEEEEEecCCCCEEEEc----------------cCCCCCccCchhcCCcceeEeec
Confidence            35778999999999999999999999999999999999999                4888887 999999999999999


Q ss_pred             CCCCCCcEEEEEEEcCCCCceeeEEEEEeeeCCCCCeEEEEeceecCCCcceeecCC
Q 029912          109 PCVVSPICYLYLKLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDIC  165 (185)
Q Consensus       109 pC~~~~IC~l~L~rdGsdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg~n~C  165 (185)
                      +|+. +||+|||+|+|+|||+||||+|+   +.+..+++|+|++|||+|+|||||+|
T Consensus        73 ~C~~-~IC~lyL~r~G~dGW~Pe~V~Iy---~~~~~~~~F~~~~~lp~~vwyG~n~C  125 (125)
T PF06232_consen   73 PCLY-QICYLYLYRSGSDGWKPEWVQIY---GSGSKPVTFYFNTFLPNGVWYGFNYC  125 (125)
T ss_pred             ccCC-cccEEEEEEccCCCCEeCeEEEE---EcCCCCeEEECCCcCCCCCcccccCC
Confidence            9995 99999999999999999999996   56778999999999999999999999

ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].

>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function

Probab=99.93  E-value=1.5e-25  Score=177.26  Aligned_cols=113  Identities=25%  Similarity=0.483  Sum_probs=99.6

Q ss_pred             ccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCC
Q 029912           35 CTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSP  114 (185)
Q Consensus        35 C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~  114 (185)
                      |.|+|+|+||+...|||+++|+|+|.+.+|+...+..+.+|          ++|+++.++.||||++|+|.|..++..++
T Consensus         1 ~~Y~I~V~TG~~~gAGTdanV~i~l~G~~G~s~~~~l~~~~----------~~l~~~~~~~FerG~~d~F~v~~~~~lG~   70 (129)
T cd01754           1 CVYTIYVQTGSIWKAGTDSRISLQIYDADGPGLRIANLEAW----------GGLMGAGHDYFERGNLDRFSGRGPCLPSP   70 (129)
T ss_pred             CEEEEEEEECCCcccCCcceEEEEEEeCCCCcccEEccccc----------ccccccccccccCCCccEEEEEeccCCCC
Confidence            89999999999999999999999999999998887755544          47888899999999999999999998899


Q ss_pred             cEEEEEEEcCC---CCceeeEEEEEeeeCCC--CCeEEEEeceecCCCc
Q 029912          115 ICYLYLKLGGE---DDWRPGFAQVRVLEGSH--HSSEYFYFRRYLPRHV  158 (185)
Q Consensus       115 IC~l~L~rdGs---dgW~pe~V~V~~~~g~~--~~~~~F~v~~wLp~~v  158 (185)
                      ||+|+|.+|++   ++||+++|+|+. ...+  .....|++++||+.+.
T Consensus        71 l~~irI~HDn~G~~p~W~l~~V~V~d-~~~~~~~~~~~F~c~rWLa~d~  118 (129)
T cd01754          71 PCWMNLTSDGTGNHPGWYVNYVEVTQ-AGQHAPCMQHLFAVEQWLATDE  118 (129)
T ss_pred             eEEEEEEECCCCCCCCcccCEEEEEe-CCCCCcCcEEEEEecEeccCCC
Confidence            99999999998   999999999984 2222  2358899999998764

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

Probab=99.91  E-value=2e-23  Score=156.76  Aligned_cols=111  Identities=26%  Similarity=0.356  Sum_probs=97.2

Q ss_pred             ccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCC
Q 029912           35 CTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSP  114 (185)
Q Consensus        35 C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~  114 (185)
                      |.|+|+|+||+...|||+++|+|.|.+++|+.....                 |++.... ||||++|+|.+..+|..++
T Consensus         1 ~~Y~v~V~Tg~~~~agT~~~v~i~l~g~~g~s~~~~-----------------l~~~~~~-f~~g~~~~f~v~~~~~lG~   62 (116)
T cd00113           1 CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIP-----------------ILDGPGS-FERGSTDTFQIDLKLDIGD   62 (116)
T ss_pred             CEEEEEEEECCCCCCCccCEEEEEEEeCCCCcccEE-----------------ccCCCCc-ccCCCceEEEEeccCCCcC
Confidence            789999999999999999999999999999988876                 2222222 9999999999999977799


Q ss_pred             cEEEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCCcceeecCC
Q 029912          115 ICYLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDIC  165 (185)
Q Consensus       115 IC~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg~n~C  165 (185)
                      |+.|+|.++++   ++|+|++|+|+.  ......+.|++++||+.+.+|..++|
T Consensus        63 i~~v~l~~d~~g~~~~W~l~~V~V~~--~~~~~~~~F~~~~Wl~~~~~~~~~r~  114 (116)
T cd00113          63 ITKVYLRRDGSGLSDGWYCESITVQA--LGTKKVYTFPVNRWVLGGKWYTSVRS  114 (116)
T ss_pred             eEEEEEEECCCCCCCCEEEeEEEEEe--CCCCCEEEEEeCCCcccCCCCCceee
Confidence            99999999998   699999999973  44456799999999999999887765

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.

>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase

Probab=99.87  E-value=2.1e-21  Score=149.13  Aligned_cols=103  Identities=22%  Similarity=0.225  Sum_probs=90.2

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI  115 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I  115 (185)
                      .|.|+|+||....|||+++|+|.|.+..|+.-.+.                 |++...+ ||||++|+|.+..++..++|
T Consensus         2 ~Y~V~V~Tg~~~~AGT~a~V~i~l~G~~g~S~~~~-----------------L~~~~~~-FerG~~d~F~v~~~~~lG~l   63 (113)
T cd01753           2 EYKVTVATGSSLFAGTDDYIYLTLVGTAGESEKQL-----------------LDRPGYD-FERGAVDEYKVKVPEDLGEL   63 (113)
T ss_pred             EEEEEEEECCCcCCccccEEEEEEEECCCcccCEE-----------------cCCCCCc-cCCCCeeEEEEecccCCCCc
Confidence            59999999999999999999999999999865544                 6665554 99999999999998777999


Q ss_pred             EEEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCCcc
Q 029912          116 CYLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVW  159 (185)
Q Consensus       116 C~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vw  159 (185)
                      ++|.|.+|++   ++|||++|+|+   +.......|++++||..+.-
T Consensus        64 ~~i~i~~d~~g~~~~W~l~~V~V~---~~~~~~~~F~c~rWl~~~~~  107 (113)
T cd01753          64 LLVRLRKRKYLLFDAWFCNYITVT---GPGGDEYHFPCYRWIEGYGT  107 (113)
T ss_pred             EEEEEEECCCCCCCCeeecEEEEE---cCCCCEEEEEhHHeECCCCE
Confidence            9999999997   99999999997   33356688999999998753

As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.

>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins

Probab=99.85  E-value=1.1e-20  Score=145.27  Aligned_cols=104  Identities=21%  Similarity=0.252  Sum_probs=92.3

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI  115 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I  115 (185)
                      .|+|+|+||...+|||+++|+|.|.+..|+.-.+.                 |+++.++.||||++|+|.+..++..+++
T Consensus         2 ~Y~v~v~Tg~~~gAGT~a~V~i~L~G~~g~s~~~~-----------------L~~~~~~~F~rG~~~~f~i~~~~dlG~l   64 (120)
T cd01752           2 LYLVTVFTGWRRGAGTTAKVTITLYGAEGESEPHH-----------------LRDPEKPIFERGSVDSFLLTTPFPLGEL   64 (120)
T ss_pred             EEEEEEEECCCCCCCcccEEEEEEEeCCCCcccEE-----------------cCCCCccceeCCCeeEEEecCccCCCCc
Confidence            59999999999999999999999999999876554                 6666678999999999999998777999


Q ss_pred             EEEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912          116 CYLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV  158 (185)
Q Consensus       116 C~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v  158 (185)
                      ++|.|.+|++   ++|+|++|+|+.  ........|++++||..+.
T Consensus        65 ~~i~l~hd~~g~~~~W~l~~V~V~~--~~t~~~~~F~~~rWl~~~~  108 (120)
T cd01752          65 QSIRLWHDNSGLSPSWYLSRVIVRD--LQTGKKWFFLCNDWLSVEE  108 (120)
T ss_pred             cEEEEEECCCCCCCCeEEEEEEEEE--CCCCcEEEEEeCcEECCcC
Confidence            9999999997   999999999984  4445678999999998764

Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function

Probab=99.85  E-value=2.6e-20  Score=143.11  Aligned_cols=103  Identities=20%  Similarity=0.252  Sum_probs=90.7

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCC-CCCCCcCCceeeeeeecCCCCCC
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDV-PRKPFQACNVDEFQVTGPCVVSP  114 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~-~~~~FErcs~D~F~v~GpC~~~~  114 (185)
                      .|+|+|+||...+|||+++|+|.|.+..|+.-.+.                 |+++ ..+.||||++|+|.+....+ ++
T Consensus         2 ~Y~v~v~TG~~~~AGT~a~V~i~L~G~~g~s~~~~-----------------L~~~~~~~~FerGs~d~F~i~~~~l-G~   63 (120)
T cd01756           2 TYEVTVKTGDVKGAGTDANVFITLYGENGDTGKRK-----------------LKKSNNKNKFERGQTDKFTVEAVDL-GK   63 (120)
T ss_pred             EEEEEEEECCCcCCCCCcEEEEEEEeCCCccccEE-----------------ccCCCcCCcccCCCeEEEEEEecCC-CC
Confidence            59999999999999999999999999999865443                 5555 67899999999999999776 89


Q ss_pred             cEEEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912          115 ICYLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV  158 (185)
Q Consensus       115 IC~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v  158 (185)
                      +..|.|.+|++   ++|+|++|+|+.  ........|++++||..+.
T Consensus        64 l~~i~i~~d~~g~~~~W~~~~V~V~~--~~~~~~~~F~~~~Wl~~~~  108 (120)
T cd01756          64 LKKIRIGHDNSGLGAGWFLDKVEIRE--PGTGDEYTFPCNRWLDKDE  108 (120)
T ss_pred             eEEEEEEECCCCCCCCcEEeEEEEEE--CCCceEEEEEeCCccCCCC
Confidence            99999999998   899999999973  4456679999999999864

In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd02899 PLAT_SR Scavenger receptor protein

Probab=99.78  E-value=2e-18  Score=133.33  Aligned_cols=97  Identities=15%  Similarity=0.241  Sum_probs=83.5

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI  115 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I  115 (185)
                      .|+|+|+||....|||+++|+|.|.+..|..-...                 |++    .||||++|+|.++...+ +++
T Consensus         2 ~Y~I~V~TG~~~~AGT~~~V~i~L~G~~g~S~~~~-----------------L~~----~F~~G~~d~F~v~~~dL-G~l   59 (109)
T cd02899           2 TYTASVQTGKDKEAGTNGTIEITLLGSSGRSNPKT-----------------LSQ----GFYPGSLKRIRFRAADV-GDI   59 (109)
T ss_pred             eEEEEEEECCCCCCCccceEEEEEEECCCCcCCEE-----------------ccC----ccCCCceEEEEECcccc-Cce
Confidence            59999999999999999999999999999654443                 443    59999999999996666 999


Q ss_pred             EEEEEEEcCC-CCceeeEEEEEeeeCCCCCeEEEEeceecCCC
Q 029912          116 CYLYLKLGGE-DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRH  157 (185)
Q Consensus       116 C~l~L~rdGs-dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~  157 (185)
                      -.|.|.++|. |+|||++|+|+.   +......|++++||...
T Consensus        60 ~~i~l~n~g~~~~Wf~~~V~V~~---~~g~~~~Fpc~rWla~~   99 (109)
T cd02899          60 NAIILSNTALNDPWYCDYVRIKS---EDGKVFAFNVKRWIGYP   99 (109)
T ss_pred             EEEEEECCCCCCCceeeEEEEEC---CCCCEEEEEcceeeCCc
Confidence            9999988886 999999999973   44566889999999763

A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.

>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain

Probab=99.75  E-value=2.9e-17  Score=121.66  Aligned_cols=102  Identities=19%  Similarity=0.110  Sum_probs=84.4

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI  115 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I  115 (185)
                      .|+|+|+||....|||+++|+|+|.+..|..-...                 ++......|||+++|+|.+..+...+++
T Consensus         2 ~Y~v~V~Tg~~~~aGT~~~V~l~L~g~~~~s~~~~-----------------~~~~~~~~f~~g~~~~f~v~~~~~lG~l   64 (105)
T smart00308        2 KYKVTVTTGGLDFAGTTASVSLSLVGAEGDGKESK-----------------LDYLFKGIFARGSTYEFTFDVDEDFGEL   64 (105)
T ss_pred             EEEEEEEECCccCCCccceEEEEEEeCCCCCccee-----------------ccccCCccccCCceEEEEEecccCCCCc
Confidence            59999999999999999999999999997521111                 1111223599999999999998777999


Q ss_pred             EEEEEEEcC-CCCceeeEEEEEeeeCCCCCeEEEEeceecCC
Q 029912          116 CYLYLKLGG-EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPR  156 (185)
Q Consensus       116 C~l~L~rdG-sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~  156 (185)
                      ..|.|++++ .++||+++|+|.-  ..+.....|++++||..
T Consensus        65 ~~v~v~~d~~~~~w~l~~V~V~~--~~~~~~~~F~c~~Wl~~  104 (105)
T smart00308       65 GAVKIKNEHRHPEWFLKSITVKD--LPTGGKYHFPCNSWVYP  104 (105)
T ss_pred             EEEEEEeCCCCCCeEEEEEEEEE--CCCCCEEEEEcCceeCC
Confidence            999999999 6999999999973  45566799999999964

>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1

Probab=99.71  E-value=3.9e-17  Score=120.55  Aligned_cols=101  Identities=22%  Similarity=0.271  Sum_probs=85.6

Q ss_pred             EEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCcE
Q 029912           37 YAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPIC  116 (185)
Q Consensus        37 YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~IC  116 (185)
                      |+|+|+||....|||+++|+|.|.+.+|+.....-+..+                 ...+  +++|+|.+..+...++|.
T Consensus         1 Y~v~v~Tg~~~~aGT~~~V~i~l~G~~g~s~~~~l~~~~-----------------~~~~--g~~d~F~i~~~~~lG~i~   61 (113)
T PF01477_consen    1 YRVTVKTGDERGAGTDANVYITLYGSKGKSGEIELLDPS-----------------GFNF--GSTDTFTIETPEDLGEIQ   61 (113)
T ss_dssp             EEEEEEEESSTEEEESSEEEEEEEETTEEEEEEEEEEEE-----------------ETST--TEEEEEEEEESSCGCSEE
T ss_pred             CEEEEEECCCCCCCcCCeEEEEEEECCCCcceEEEeeee-----------------eccc--CceEEeeeeecccCCCCc
Confidence            999999999999999999999999999997776533221                 1222  999999999976669999


Q ss_pred             EEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912          117 YLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV  158 (185)
Q Consensus       117 ~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v  158 (185)
                      .|.|.+++.   ++|+|++|+|+.  ......+.|++++||..+.
T Consensus        62 ~i~i~~~~~~~~~~W~l~~V~V~~--~~~~~~~~F~~~~Wl~~~~  104 (113)
T PF01477_consen   62 KIRIWHDGSGPSPSWYLDSVVVTD--GETGRTYTFPCNRWLDPDK  104 (113)
T ss_dssp             EEEEEEESSSSSSEEEEEEEEEEE--TTTSEEEEEEEEEEESTTE
T ss_pred             EEEEEEccCCCccceEEEEEEEEe--CCCCcEEEEEcCCEECCCC
Confidence            999999965   999999999974  5566779999999998865

13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....

>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family

Probab=99.55  E-value=9.5e-14  Score=108.19  Aligned_cols=96  Identities=13%  Similarity=0.128  Sum_probs=78.0

Q ss_pred             cEEEEEEcCCC-CCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCC
Q 029912           36 TYAVTIETTCT-KGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSP  114 (185)
Q Consensus        36 ~YtV~IkTgc~-~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~  114 (185)
                      .|.|+|.||.. .+|||+++|+|.+.+..|..-..                 .|++   +.|      .|.+....+ ++
T Consensus         2 ~Y~VtV~TG~~~~gAGT~anV~i~L~G~~g~s~~~-----------------~L~~---~~f------~~~v~~~~L-G~   54 (114)
T cd01757           2 PYHVVIVPSKKLGGSMFTANPWICVSGELGETPPL-----------------QIPK---NSL------EMTFDCQNL-GK   54 (114)
T ss_pred             eEEEEEEeCCCCCCCCCcceEEEEEEEcCCCcCCE-----------------EecC---Cce------EEEEecCCc-CC
Confidence            59999999999 59999999999999999964332                 2432   233      577776666 89


Q ss_pred             cEEEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCCcce
Q 029912          115 ICYLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWH  160 (185)
Q Consensus       115 IC~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwy  160 (185)
                      +.+|.|.+|++   ++||+++|+|+.  -.......|++++||+.+..-
T Consensus        55 L~~irIwHDnsG~~~~Wfl~~V~V~d--~~t~~~~~FpC~rWLa~~~~D  101 (114)
T cd01757          55 LTTVQIGHDNSGLLAKWLVEYVMVRN--EITGHTYKFPCGRWLGEGVDD  101 (114)
T ss_pred             cEEEEEEECCCCCCCCeeeeEEEEEe--CCCCCEEEEecCceecCCCCc
Confidence            99999999998   999999999984  245566889999999987644

PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.

>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain

Probab=98.64  E-value=1.1e-06  Score=68.11  Aligned_cols=95  Identities=12%  Similarity=0.126  Sum_probs=75.7

Q ss_pred             ccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCC
Q 029912           35 CTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSP  114 (185)
Q Consensus        35 C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~  114 (185)
                      +.|.|+|.|+....|||+++|+|+|++..|+.-..+                 |.+   +.||+|++|+|-+.-+-..++
T Consensus         1 ~hY~vtV~~~~~~~agt~~~v~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~~~sfli~t~~~lG~   60 (120)
T cd01755           1 WHYQVKVHLSGKKNLEVDGTFTVSLYGTKGETEQLP-----------------IVL---GELKPNKTYSFLIDTEVDIGD   60 (120)
T ss_pred             CEEEEEEEEeCccccCcCccEEEEEEcCCCCcccEE-----------------EeC---CcccCCCEEEEEEEcCCCccc
Confidence            369999999999999999999999999998864443                 221   247999999999965555699


Q ss_pred             cEEEEEEEcCC----------CCceeeEEEEEeeeCCCCCeEEEEec
Q 029912          115 ICYLYLKLGGE----------DDWRPGFAQVRVLEGSHHSSEYFYFR  151 (185)
Q Consensus       115 IC~l~L~rdGs----------dgW~pe~V~V~~~~g~~~~~~~F~v~  151 (185)
                      +-.|.++.|++          +.|+.+.|.|..  |.+.....|=..
T Consensus        61 l~~v~~~~dn~~~~~~~~~~~p~~~~~~I~Vq~--get~~~~~FC~~  105 (120)
T cd01755          61 LLKVKFKWENNVINSNSGETLPKLGARKIRVKS--GETQKKFTFCSQ  105 (120)
T ss_pred             eEEEEEEEcCCCcccccccCCCcEEEEEEEEEE--CCCCCEEEEECC
Confidence            99999999887          288899999974  666555555433

This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL)

Probab=98.02  E-value=0.00012  Score=58.63  Aligned_cols=78  Identities=15%  Similarity=0.163  Sum_probs=59.8

Q ss_pred             ccEEEEEEcCCCCCCC-CCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912           35 CTYAVTIETTCTKGAE-TSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS  113 (185)
Q Consensus        35 C~YtV~IkTgc~~~ag-Tdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~  113 (185)
                      +.|.|+|.|+....++ |+++|+|+|++..|+.-..+                 |.++  +.+|+|++|+|-+.-+-..+
T Consensus         1 yhYqVtV~~~~~~~~~~t~~~v~i~L~G~~g~S~~~~-----------------l~~~--~~~~~G~t~sfLi~t~~dlG   61 (137)
T cd01758           1 FHYQLKIHFFNQTNRIETDPTFTISLYGTLGESENLP-----------------LTLP--EGITGNKTNSFLITTEKDIG   61 (137)
T ss_pred             CeEEEEEEEecccCCCcccceEEEEEEcCCCcccCEE-----------------EecC--cccCCCCeEEEEEECCCCcC
Confidence            4699999999998888 99999999999998854443                 2222  35699999999996555559


Q ss_pred             CcEEEEEEEcCCCCceee
Q 029912          114 PICYLYLKLGGEDDWRPG  131 (185)
Q Consensus       114 ~IC~l~L~rdGsdgW~pe  131 (185)
                      ++-.|.++..+..+|.+.
T Consensus        62 ~L~~vk~~W~~n~~~~~s   79 (137)
T cd01758          62 DLLMLKLKWEGSSLWSNS   79 (137)
T ss_pred             CEEEEEEEEeCCCCCChh
Confidence            999999955554344433

LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01759 PLAT_PL PLAT/LH2 domain of pancreatic triglyceride lipase

Probab=93.05  E-value=2.2  Score=33.28  Aligned_cols=88  Identities=11%  Similarity=0.111  Sum_probs=64.6

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI  115 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I  115 (185)
                      .|.|.|+-+....  ++..++|+|++..|+.-..+                 +   ..+.||.+++-+|-+.-+=..+++
T Consensus         2 ~Yqv~V~~s~~~~--~~g~~~vsL~G~~g~s~~~~-----------------i---~~g~l~pg~tys~li~~d~dvG~l   59 (113)
T cd01759           2 RYKVSVTLSGKKK--VTGTILVSLYGNKGNTRQYE-----------------I---FKGTLKPGNTYSAFIDVDVDVGPL   59 (113)
T ss_pred             eEEEEEEEecccc--cCceEEEEEEcCCCCccceE-----------------E---EeeeecCCCEEEEEEEccCCCCCE
Confidence            4889998876543  89999999999999864443                 1   134699999999999766666999


Q ss_pred             EEEEEEEcCCCCce-------eeEEEEEeeeCCCCCeEEE
Q 029912          116 CYLYLKLGGEDDWR-------PGFAQVRVLEGSHHSSEYF  148 (185)
Q Consensus       116 C~l~L~rdGsdgW~-------pe~V~V~~~~g~~~~~~~F  148 (185)
                      -.|.+..+++ -|-       .++|.|.  .|.+...+.|
T Consensus        60 ~~Vkf~W~~~-~~n~~~p~~~~~~I~Vq--~Ge~~~~~~F   96 (113)
T cd01759          60 TKVKFIWNNN-VINITLPKVGAEKITVQ--SGKDGKVFNF   96 (113)
T ss_pred             EEEEEEEeCC-ccCCCCCeEEEEEEEEE--eCCCccEEEE
Confidence            9999999886 332       5677765  3544444555

Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of triglyceride lipases is in energy production. The proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>TIGR03230 lipo_lipase lipoprotein lipase

Probab=85.67  E-value=10  Score=35.90  Aligned_cols=90  Identities=14%  Similarity=0.234  Sum_probs=63.7

Q ss_pred             EEEEEEcCCCCC-CCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912           37 YAVTIETTCTKG-AETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI  115 (185)
Q Consensus        37 YtV~IkTgc~~~-agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I  115 (185)
                      |.|.|+.+.... ..++..++|+|++..|+.-..+                 +   ....||-+++-+|-|.-+-..+++
T Consensus       311 y~v~v~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~-----------------~---~~~~~~~~~t~~~~i~~~~~~g~~  370 (442)
T TIGR03230       311 YQVKVHFFGKTSLSHTDQPMKISLYGTHGEKENIP-----------------F---TLPEVSTNKTYSFLITTDVDIGEL  370 (442)
T ss_pred             EEEEEEEeccccccccCCcEEEEEEcCCCCccceE-----------------E---eeeeecCCCeEEEEEecccCCCce
Confidence            677777765432 3577788888888877754433                 1   123599999999999777667999


Q ss_pred             EEEEEEEcCC--CCce---------eeEEEEEeeeCCCCCeEEE
Q 029912          116 CYLYLKLGGE--DDWR---------PGFAQVRVLEGSHHSSEYF  148 (185)
Q Consensus       116 C~l~L~rdGs--dgW~---------pe~V~V~~~~g~~~~~~~F  148 (185)
                      -.|.+..+++  ..|.         .++|+|.  .|.+...++|
T Consensus       371 ~~v~~~w~~~~~~~~~~~~~~~~~~~~~i~v~--~ge~~~~~~f  412 (442)
T TIGR03230       371 LMVKLKWEKDTYISWSDWWSSPGFHIRKLRIK--SGETQSKVIF  412 (442)
T ss_pred             EEEEEEEeCCCcccchhhhcCCceeEEEEEEE--eCCCccEEEE
Confidence            9999999988  3776         6777776  3555444555

Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.

>COG3354 FlaG Putative archaeal flagellar protein G [Cell motility and secretion]

Probab=81.41  E-value=9.8  Score=31.70  Aligned_cols=42  Identities=14%  Similarity=0.169  Sum_probs=29.1

Q ss_pred             CCCccEEEEEE-cCCCCCCCCCcceEEEEec--CCCCeeEEeecc
Q 029912           32 KENCTYAVTIE-TTCTKGAETSNPVSLRFGD--TKSTDILVKHLN   73 (185)
Q Consensus        32 ~~~C~YtV~Ik-Tgc~~~agTdd~IsI~fgD--a~Gn~v~~~~L~   73 (185)
                      .++-+|+++|| ||..+.+.+.+.|.+-.=+  ..++.+.+...+
T Consensus        67 ~g~~t~t~yiKNtG~~~~~fd~~sitVliDG~iv~~a~~~~~~~~  111 (154)
T COG3354          67 DGPYTYTFYIKNTGSDSIAFDNTSITVLIDGNIVTPAYVTFTSVN  111 (154)
T ss_pred             CCceEEEEEEecCCCcccccCCCeEEEEEcCcEeccceEEEEecC
Confidence            35678999998 7888889999999886644  234444444333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	185
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	5e-08

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698

 Score = 51.1 bits (121), Expect = 5e-08
 Identities = 26/156 (16%), Positives = 53/156 (33%), Gaps = 22/156 (14%)

Query: 29  SKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVL 88
           S +  +  Y +T+ET   +GA T   VS++       +       +             L
Sbjct: 14  SMHHHHMKYKITVETGDLRGAGTDASVSIKLTGKDGAE-------TSAFS---------L 57

Query: 89  DDVPRKPFQACNVDEFQVTGPCVVSPICYLYLK---LGGEDDWRPGFAQVRVLEGSHHSS 145
           D      F++   D +  +G   V  I  + LK    G + DW      +  ++ +   S
Sbjct: 58  DKYFHNDFESGGTDTYDQSGVD-VGEIAMITLKENGFGLKSDWYIAKVIIEKIDEATGFS 116

Query: 146 EYFYF--RRYLPRHVWHGSDICDREVTPFGIKHKRK 179
             + F   R++ + +           +   +K   +
Sbjct: 117 NKYIFPCYRWVIKQLVVYEGKAILPNSKDNVKTIAE 152

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	185
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	99.84
3v98_A	691	Arachidonate 5-lipoxygenase; dioxygenase, oxidored	99.76
1lox_A	662	15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot	99.74
3dy5_A	1066	Allene oxide synthase-lipoxygenase protein; fusion	99.72
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	99.68
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	99.67
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	99.65
3cwz_B	384	RAB6IP1, RAB6-interacting protein 1; RAB small GTP	99.6
1rp1_A	450	Pancreatic lipase related protein 1; hydrolase, li	97.37
1bu8_A	452	Protein (pancreatic lipase related protein 2); hyd	97.37
1hpl_A	449	Lipase; hydrolase(carboxylic esterase); 2.30A {Equ	96.94
1gpl_A	432	RP2 lipase; serine esterase, hydrolase, lipid degr	96.92
1w52_X	452	Pancreatic lipase related protein 2; detergent, cl	96.34
2iuj_A	853	Lipoxygenase L-5; dioxygenase, metal-binding, oxid	87.45

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}

Probab=99.84  E-value=6.1e-21  Score=182.79  Aligned_cols=121  Identities=21%  Similarity=0.327  Sum_probs=94.7

Q ss_pred             hcCCCCCCCCCCCCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCC
Q 029912           20 AGGDEGAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQAC   99 (185)
Q Consensus        20 ~~~~~~~p~~~~~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErc   99 (185)
                      .||..+.++......|.|+|+|+||+..+||||++|+|.|.+.+|.++...                .|+++.+++||||
T Consensus         5 ~~~~~~~~g~~~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~~S~~~----------------~L~~~~~~~FeRG   68 (698)
T 3vf1_A            5 TGGQQMGRGSMHHHHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAF----------------SLDKYFHNDFESG   68 (698)
T ss_dssp             --------------CEEEEEEEEECSCCCSCSBCCEEEEEEETTSCBCCCE----------------EECCBCSSSSCCC
T ss_pred             cccccccCCCCCCCcceEEEEEEECCCCCCCCCceeEEEEEECCCCeecce----------------EeCCCCCCccccC
Confidence            455555555555679999999999999999999999999999999944444                3777788999999


Q ss_pred             ceeeeeeecCCCCCCcEEEEEEEcCC---CCceeeEEEEEeeeCC-C--CCeEEEEeceecCCCc
Q 029912          100 NVDEFQVTGPCVVSPICYLYLKLGGE---DDWRPGFAQVRVLEGS-H--HSSEYFYFRRYLPRHV  158 (185)
Q Consensus       100 s~D~F~v~GpC~~~~IC~l~L~rdGs---dgW~pe~V~V~~~~g~-~--~~~~~F~v~~wLp~~v  158 (185)
                      ++|+|.++..|+ |++|.|.|.+|++   ++|||++|+|+. .+. |  .....|++++||..++
T Consensus        69 s~D~F~v~~~~L-G~L~~IrI~hDnsG~~~~Wfl~~V~V~~-~~t~~~~g~~~~Fpc~rWL~~d~  131 (698)
T 3vf1_A           69 GTDTYDQSGVDV-GEIAMITLKENGFGLKSDWYIAKVIIEK-IDEATGFSNKYIFPCYRWVIKQL  131 (698)
T ss_dssp             CEEEEEEEECCC-SSEEEEEEEECCCSSBCCCEEEEEEEEE-ECTTTCCEEEEEEEEEEECSSEE
T ss_pred             CeeEEEEEeccc-CCceEEEEEECCCCCCCCeEEeEEEEEc-CCCCCCCCcEEEEEhhhcccCCc
Confidence            999999999998 8999999999997   999999999985 232 1  4568999999999984

>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B

Probab=99.76  E-value=3.1e-18  Score=164.04  Aligned_cols=108  Identities=19%  Similarity=0.241  Sum_probs=89.5

Q ss_pred             CCCCCCCCCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeee
Q 029912           25 GAPKSKNKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEF  104 (185)
Q Consensus        25 ~~p~~~~~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F  104 (185)
                      |-|..  ...|.|+|+|+||...+|||+++|+|.|.+.+|..-.+.                 |++   +.||||++|+|
T Consensus        14 ~~~~~--~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~S~~~~-----------------L~~---~~FeRG~~D~F   71 (691)
T 3v98_A           14 LVPRG--SHMPSYTVTVATGSQEHAGTDDYIYLSLVGSAGCSEKHL-----------------LDK---GSFERGAVDSY   71 (691)
T ss_dssp             -----------CEEEEEEECCSTTCCBCSEEEEEEEESSCBCCCEE-----------------CCS---SCBCTTCEEEE
T ss_pred             cccCC--CCceeEEEEEEECCCCCCCCCceeEEEEEECCCceeeEE-----------------ecC---CcccCCCeeEE
Confidence            44544  579999999999999999999999999999999865443                 665   89999999999


Q ss_pred             eeecCCCCCCcEEEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCC
Q 029912          105 QVTGPCVVSPICYLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRH  157 (185)
Q Consensus       105 ~v~GpC~~~~IC~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~  157 (185)
                      .++.++..|++|.|.|.+|++   ++|||++|+|+.  .. .....|++++||..+
T Consensus        72 ~v~~~~~LG~L~~IrI~hDnsG~~~~Wfl~~V~V~~--~~-g~~~~Fpc~rWL~~d  124 (691)
T 3v98_A           72 DVTVDEELGEIQLVRIEKRKYGSNDDWYLKYITLKT--PH-GDYIEFPCYRWITGD  124 (691)
T ss_dssp             EECCSSCCCSEEEEEEEEECSSSCCCEEEEEEEEEC--TT-SCEEEEEEEEEECSS
T ss_pred             EEEeccCCCCceEEEEEECCCCCCCCeEEeEEEEEC--CC-CcEEEEehHHhcCCC
Confidence            999988889999999999997   999999999984  22 567999999999987

>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*

Probab=99.74  E-value=1.1e-17  Score=159.48  Aligned_cols=96  Identities=18%  Similarity=0.183  Sum_probs=87.4

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI  115 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I  115 (185)
                      .|+|+|+||+..+||||++|+|.|.+.+|......                 |+     +||||++|+|.+..++..|+|
T Consensus         2 ~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~s~~~~-----------------L~-----~FerG~~d~F~v~~~~dlG~l   59 (662)
T 1lox_A            2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEVELGS-----------------CL-----RPTRNKEEEFKVNVSKYLGSL   59 (662)
T ss_dssp             EEEEEEEECCSTTCCCSSEEEEEEEESSCEEEEEE-----------------EE-----CCCTTCEEEEEEECSSCCCSE
T ss_pred             eEEEEEEECCCcCCCcCCcEEEEEEECCCCccCee-----------------CC-----CcCCCCccEEEEEecCCCCcc
Confidence            59999999999999999999999999999987764                 54     899999999999999989999


Q ss_pred             EEEEEEEcCC---CCceeeEEEEEeeeCCC--CCeEEEEeceecCC
Q 029912          116 CYLYLKLGGE---DDWRPGFAQVRVLEGSH--HSSEYFYFRRYLPR  156 (185)
Q Consensus       116 C~l~L~rdGs---dgW~pe~V~V~~~~g~~--~~~~~F~v~~wLp~  156 (185)
                      |.|.|+++++   ++|||++|+|+.   ++  .....|++++||..
T Consensus        60 ~~I~I~~d~~g~~~~Wfl~~V~V~~---p~~~g~~~~F~Cn~WL~~  102 (662)
T 1lox_A           60 LFVRLRKKHFLKEDAWFCNWISVQA---LGAAEDKYWFPCYRWVVG  102 (662)
T ss_dssp             EEEEEEEECSSSCCCEEEEEEEEEE---SSSCCCCEEEEEEEEECS
T ss_pred             eEEEEEeCCCCCCCCcEEeEEEEec---CCCCCcEEEEEeceEecC
Confidence            9999999998   999999999973   43  44588999999987

>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}

Probab=99.72  E-value=1.8e-17  Score=164.74  Aligned_cols=107  Identities=21%  Similarity=0.300  Sum_probs=87.2

Q ss_pred             CCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCC
Q 029912           32 KENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCV  111 (185)
Q Consensus        32 ~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~  111 (185)
                      ...|.|+|+|+||+..+|||+++|+|.|.+.+|..-.+                 .|+++.+++||||++|+|.++. +.
T Consensus       371 ~~~~~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~S~~~-----------------~L~~~~~~~FeRGs~d~F~v~~-~~  432 (1066)
T 3dy5_A          371 GQNAIYNVEVETGDREHAGTDATITIRITGAKGRTDYL-----------------KLDKWFHNDFEAGSKEQYTVQG-FD  432 (1066)
T ss_dssp             --CCEEEEEEEECCSTTCCCCSCCEEEEEESSCBCCCE-----------------EC-------CCTTCEEEEEEEC-SC
T ss_pred             cCceeEEEEEEECCCCCCCCCceeEEEEEECCCceeeE-----------------EeCCCCcCccccCCcceEEEEE-ec
Confidence            36899999999999999999999999999999985443                 3778888999999999999999 55


Q ss_pred             CCCcEEEEEEEcCC------CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912          112 VSPICYLYLKLGGE------DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV  158 (185)
Q Consensus       112 ~~~IC~l~L~rdGs------dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v  158 (185)
                      .|++|.|.|.+|++      ++|||++|+|+.  ........|++++||..++
T Consensus       433 LG~L~~IrI~hDnsG~~~~~~~Wfl~~V~V~~--~~tg~~~~Fpc~rWL~~d~  483 (1066)
T 3dy5_A          433 VGDIQLIELHSDGGGYWSGDPDWFVNRVIIIS--STQDRVYSFPCFRWVIKDM  483 (1066)
T ss_dssp             CSSEEEEEEECCCCC--CCCCCEEEEEEEEEE--SSSSSCEEEEEEEEESSEE
T ss_pred             CCCceEEEEEECCCCCCCCCCCeEEeEEEEEe--CCCCCEEEEehhhhccCCe
Confidence            59999999999996      599999999984  3345679999999999883

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A

Probab=99.68  E-value=1e-16  Score=153.61  Aligned_cols=102  Identities=22%  Similarity=0.320  Sum_probs=88.5

Q ss_pred             CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912           34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS  113 (185)
Q Consensus        34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~  113 (185)
                      .-.|.|+|+||+..+|||+++|+|.|.+.+|..-..                 .|++   ++||||++|+|.++. +..|
T Consensus         6 ~~~~~~~V~TG~~~~AGTda~V~I~L~G~~G~S~~~-----------------~L~~---~~FeRGs~d~F~v~~-~dLG   64 (696)
T 3fg1_A            6 HAIYNVEVETGDREHAGTDATITIRITGAKGRTDYL-----------------KLDK---GSFEAGSKEQYTVQG-FDVG   64 (696)
T ss_dssp             EEEEEEEEEECSSTTCCBCSCEEEEEEETTEECCCE-----------------EECS---SCBCTTCEEEEEEEE-ECCS
T ss_pred             cceeeEEEEeCCCCCCCCCceeEEEEEECCCceeeE-----------------EeCC---CCcCCCCccEEEEEE-ccCC
Confidence            346999999999999999999999999999985433                 3665   899999999999999 5569


Q ss_pred             CcEEEEEEEcCC------CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912          114 PICYLYLKLGGE------DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV  158 (185)
Q Consensus       114 ~IC~l~L~rdGs------dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v  158 (185)
                      ++|.|.|.+|++      ++|||++|+|+.  ........|++++||..++
T Consensus        65 ~L~~IrI~hDnsg~G~~~~~Wf~~~V~V~~--~~tg~~~~Fpc~rWL~~dl  113 (696)
T 3fg1_A           65 DIQLIELHSDGGGYWSGDPDWFVNRVIIIS--STQDRVYSFPCFRWVIKDM  113 (696)
T ss_dssp             SEEEEEEEECCCCTTCSCCCEEEEEEEEEE--TTCSSCEEEEEEEEESSEE
T ss_pred             CceEEEEEECCcCCCCCCCCeEeeEEEEEe--CCCCcEEEeEhhhhccCCe
Confidence            999999999986      799999999984  3345669999999999873

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A

Probab=99.67  E-value=8.3e-16  Score=138.59  Aligned_cols=107  Identities=12%  Similarity=0.153  Sum_probs=93.8

Q ss_pred             CCCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeec--
Q 029912           31 NKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTG--  108 (185)
Q Consensus        31 ~~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~G--  108 (185)
                      +...=.|+|+|+||....|||+++|+|.|.+..|......                 ||+ +.++||||++|+|.|.-  
T Consensus       252 ~~~~~~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~~-----------------LD~-~gndFe~G~~d~y~v~~~~  313 (370)
T 2wxu_A          252 GKNVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEWE-----------------MDN-PGNDFMTGSKDTYTFKLKD  313 (370)
T ss_dssp             SCCCCEEEEEEEECCSTTCSCCSEEEEEEEETTCCEEEEE-----------------CCC-SSCTTCTTCEEEEEEECSC
T ss_pred             CccceeEEEEEEcCCcccCCCcceEEEEEEcCCCccchhh-----------------hhC-cCCCcCCCCeeeEEEecCC
Confidence            4456679999999999999999999999999999987765                 777 57999999999999987  


Q ss_pred             -CCCCCCcEEEEEEEcCC----CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912          109 -PCVVSPICYLYLKLGGE----DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV  158 (185)
Q Consensus       109 -pC~~~~IC~l~L~rdGs----dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v  158 (185)
                       +...++|-.|.|.+...    |+|+|+||+|+.   +......||+++||..+-
T Consensus       314 ~~~~lg~l~~v~l~K~~~~~~~D~Wfc~~i~V~~---p~~~~~~FP~y~Wi~g~~  365 (370)
T 2wxu_A          314 ENLKIDDIQNMWIRKRKYTAFPDAYKPENIKIIA---NGKVVVDKDINEWISGNS  365 (370)
T ss_dssp             TTCCGGGEEEEEEEEECSSSSCCCBCEEEEEEEE---TTEEEEEEECCSCBCTTC
T ss_pred             CccCcCceEEEEEEccCCCCCCccceeeeEEEEc---CCCcEEEeccceeeeCCe
Confidence             77889999999999877    999999999984   334568899999997654

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3

Probab=99.65  E-value=1.4e-15  Score=137.09  Aligned_cols=107  Identities=15%  Similarity=0.207  Sum_probs=94.3

Q ss_pred             CCCCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeec--
Q 029912           31 NKENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTG--  108 (185)
Q Consensus        31 ~~~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~G--  108 (185)
                      +...=.|+|+|+||....|||++.|+|.|.+..|..-...                 ||+ +.++||||++|+|.|.-  
T Consensus       252 ~~~~n~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges~~~~-----------------LD~-~gndFe~G~~d~y~v~~~~  313 (370)
T 1olp_A          252 DYDLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEWA-----------------LDN-PGNDFTRNQEGTYTLKLKN  313 (370)
T ss_dssp             CCCCSEEEEEEEECSSTTCCCCSEEEEEEEETTCCEEEEE-----------------CCC-SSCCSCTTCEEEEEEECSC
T ss_pred             CcccceEEEEEEcCCcccCCCcceEEEEEEcCCCccchhh-----------------hhC-cCCccCCCCeeEEEEeccC
Confidence            4456679999999999999999999999999999998775                 777 67999999999999987  


Q ss_pred             -CCCCCCcEEEEEEEcCC----CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912          109 -PCVVSPICYLYLKLGGE----DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV  158 (185)
Q Consensus       109 -pC~~~~IC~l~L~rdGs----dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v  158 (185)
                       +...++|-.|.|.+...    |+|+|++|+|+.   +......||+++||..+-
T Consensus       314 ~~~dlg~l~~v~l~K~~~~~~~D~Wfc~~i~V~~---p~~~~~~FP~y~Wi~g~~  365 (370)
T 1olp_A          314 KNTKYSDIKNMWIRDEKLTVATDGWKPSYVKVIA---GDKVRLEKNINEWISGGT  365 (370)
T ss_dssp             SSCCGGGEEEEEEEEECSSSSCCEECEEEEEEEE---TTEEEEEEECCSCEETTE
T ss_pred             CcCCcCceEEEEEEcCCCCCCCccceeeeEEEEc---CCCcEEEeccceeeeCce
Confidence             77789999999999887    999999999984   335568899999997653

>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus}

Probab=99.60  E-value=4.9e-15  Score=133.75  Aligned_cols=99  Identities=11%  Similarity=0.105  Sum_probs=84.3

Q ss_pred             CCCCccEEEEEEcCCCCC-CCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecC
Q 029912           31 NKENCTYAVTIETTCTKG-AETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGP  109 (185)
Q Consensus        31 ~~~~C~YtV~IkTgc~~~-agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~Gp  109 (185)
                      ....|.|+|+|+||...+ |||+++|+|.|++.+|..-.+.                 |++.         .|+|.+...
T Consensus       244 Ttt~~~Y~V~V~TG~~~gaAGT~anV~I~L~G~~G~S~~~~-----------------L~~~---------~d~F~v~~~  297 (384)
T 3cwz_B          244 TTILIPYHILIVPSKKLGGSMFTANPWICISGELGETQILQ-----------------IPRN---------VLEMTFECQ  297 (384)
T ss_dssp             TTSEEEEEEEEEECCCCCSCCCCSCEEEEEEESSCBCCCEE-----------------CCTT---------CCEEEEEEE
T ss_pred             cccceeEEEEEEeCCCCCCCCCCCcEEEEEEeCCCCcccEE-----------------eccc---------CceEEEecc
Confidence            356799999999999998 6999999999999999865443                 4432         689999999


Q ss_pred             CCCCCcEEEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCCc
Q 029912          110 CVVSPICYLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHV  158 (185)
Q Consensus       110 C~~~~IC~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~v  158 (185)
                      |+ |+++.|.|.+|++   ++||+++|+|+.  ......+.|++++||..+.
T Consensus       298 ~L-G~L~~I~I~HDnsG~~p~Wfl~~V~V~d--~~tg~~~~Fpc~rWL~~d~  346 (384)
T 3cwz_B          298 NL-GKLTTVQIGHDNSGLYAKWLVECVMVRN--EVTGHTYKFPCGRWLGKGM  346 (384)
T ss_dssp             CC-CSEEEEEEEECCCSSCCCEEEEEEEEEE--TTTCCEEEEEEEEEESTTS
T ss_pred             cC-CCceEEEEEECCCCCCCceeEeEEEEEe--CCCCcEEEEECceeCCCCC
Confidence            98 8999999999998   999999999984  3345679999999999664

>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A

Probab=97.37  E-value=0.00045  Score=62.51  Aligned_cols=107  Identities=10%  Similarity=0.071  Sum_probs=81.5

Q ss_pred             CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912           34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS  113 (185)
Q Consensus        34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~  113 (185)
                      ...|.|+|.|+.   ++|+..|+|+|.+.+|+.-...                 |.+   +.||++++++|-+.-+-..+
T Consensus       338 ~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~t~s~li~~~~dlG  394 (450)
T 1rp1_A          338 RWRYGVSITLSG---KRATGQAKVALFGSKGNTHQFN-----------------IFK---GILKPGSTHSNEFDAKLDVG  394 (450)
T ss_dssp             CEEEEEEEEEEE---SCEEEEEEEEEEETTEECCCEE-----------------EEE---EEECTTCEEEEEEEESSCCS
T ss_pred             cceeEEEEEEcC---CceeEEEEEEEEcCCCCcceEE-----------------ecc---cccCCCCEEEEEEECCCCCC
Confidence            456999999987   7999999999999998753322                 211   25999999999986554458


Q ss_pred             CcEEEEEEEcC------CCCceeeEEEEEeeeCCCCCeEEEEeceecCCCcceeecCC
Q 029912          114 PICYLYLKLGG------EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDIC  165 (185)
Q Consensus       114 ~IC~l~L~rdG------sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg~n~C  165 (185)
                      +|-.|.|....      ...|+.+.|+|..  +.+.....|=-++|+-+++--.+.-|
T Consensus       395 ~l~~v~~~W~~~~~~~~~p~~~i~~I~V~~--~e~~~~~~FC~~~~~~~~~~~~~~~~  450 (450)
T 1rp1_A          395 TIEKVKFLWNNNVVNPTFPKVGAAKITVQK--GEEKTVHSFCSESTVREDVLLTLTPC  450 (450)
T ss_dssp             SEEEEEEEEEEC--CTTCCCEEEEEEEEEE--TTCSSCEEEECSCEECTTCCEEEEEC
T ss_pred             CceEEEEEEECCCCCCCCCeEEEEEEEEEe--CCCCCeEEecCCCccccCceecccCC
Confidence            99999955443      3799999999974  65666688999999998876555444

>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*

Probab=97.37  E-value=0.00071  Score=60.81  Aligned_cols=108  Identities=9%  Similarity=0.041  Sum_probs=80.7

Q ss_pred             CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912           34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS  113 (185)
Q Consensus        34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~  113 (185)
                      ...|.|+|.|+.  .++|+..|+|+|.+.+|+.-...                 |.+   +.||++++++|-+.-+-..+
T Consensus       339 ~~~Y~v~V~~~~--~~~t~g~i~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~~~s~li~~~~dlG  396 (452)
T 1bu8_A          339 RWRYKVSVTLSG--AKKLSGYILVALYGNNGNSKQYE-----------------IFK---GSLKPEARHVRDIDVDINVG  396 (452)
T ss_dssp             CEEEEEEEEEEC--SSCEEEEEEEEEEETTEECCCEE-----------------EEE---EEECTTCEEEEEEEESSCCC
T ss_pred             ceeeEEEEEEcC--CCceeeEEEEEEEcCCCCcceEE-----------------ecc---cccCCCCEEEEEEeCCCCCC
Confidence            445899999965  57999999999999998753322                 211   25999999999986444448


Q ss_pred             CcEEEEEEEc-C-----CCCceeeEEEEEeeeCCCCCeEEEEeceecCCCcceeecCC
Q 029912          114 PICYLYLKLG-G-----EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDIC  165 (185)
Q Consensus       114 ~IC~l~L~rd-G-----sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg~n~C  165 (185)
                      +|-.|.|... +     ...|+.+.|+|..  +.+.....|=-+.|+-+|+--.+.-|
T Consensus       397 ~l~~v~~~W~~~~~~~~~p~~~i~~I~V~~--~e~~~~~~FC~~~~~~~~~~~~~~~~  452 (452)
T 1bu8_A          397 EIQKVKFLWNNKVINLFRPTLGASQITVQS--GVDGKEYNFCSSDTVREDVLQSLYPC  452 (452)
T ss_dssp             SEEEEEEEEEC------CCCBEEEEEEEEE--TTTCCEEEEECCCCBCTTCCEEEEEC
T ss_pred             CceEEEEEEECCCCCCCCCeEEEEEEEEEe--CCCCCeEEecCCCccccCceecccCC
Confidence            9999995444 3     2799999999974  66666788989999988876555444

>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19

Probab=96.94  E-value=0.002  Score=58.31  Aligned_cols=101  Identities=11%  Similarity=-0.000  Sum_probs=72.4

Q ss_pred             CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912           34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS  113 (185)
Q Consensus        34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~  113 (185)
                      ...|.|+|.|+.   ++|+..|+|+|.+.+|+.-...                 |.+   +.||++++++|-+.-+-..+
T Consensus       338 ~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~~~s~li~~~~dlG  394 (449)
T 1hpl_A          338 RWRYRVDVTLSG---KKVTGHVLVSLFGNKGNSRQYE-----------------IFQ---GTLKPDNTYSNEFDSDVEVG  394 (449)
T ss_dssp             CEEEEEEEEEEE---CCEEEEEEEEEEETTEECCCEE-----------------EEE---EEECSSCEEEEEEEESSCCC
T ss_pred             cceeEEEEEEcC---CceeEEEEEEEEcCCCCceeEE-----------------ecc---cccCCCcEEEEEEeCCCCCC
Confidence            455899999987   7999999999999998753322                 211   25999999999986444448


Q ss_pred             CcEEEEEEEc-C-----CCCceeeEEEEEeeeCCCCCeEEEEeceecCC-Cccee
Q 029912          114 PICYLYLKLG-G-----EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPR-HVWHG  161 (185)
Q Consensus       114 ~IC~l~L~rd-G-----sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~-~vwyg  161 (185)
                      +|-.|.|... +     ...|+.+.|+|..   .+.....| +++|+-. |+--.
T Consensus       395 ~l~~v~~~W~~~~~~~~~p~~~i~~I~V~~---e~~~~~~f-C~~~~~~~~~~~~  445 (449)
T 1hpl_A          395 DLEKVKFIWYNNVINLTLPKVGASKITVER---NDGSVFNF-CSEETVREDVLLT  445 (449)
T ss_dssp             SEEEEEEEEEECSCCTTCCCEEEEEEEEEC---TTSCEEEE-ECCCCBCTTCCEE
T ss_pred             CceEEEEEEECCCCCCCCCeEEEEEEEEEe---CCCCeeee-cCCCccccCeeec
Confidence            9999995444 3     2799999999973   22333556 8887643 44333

>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A

Probab=96.92  E-value=0.0023  Score=56.74  Aligned_cols=102  Identities=7%  Similarity=-0.009  Sum_probs=71.2

Q ss_pred             CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912           34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS  113 (185)
Q Consensus        34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~  113 (185)
                      ...|.|+|.|+.   ++|+..|+|+|.+.+|+.-...                 |.+   +.||++++++|-+.-+-..+
T Consensus       321 ~~~Y~v~v~~~~---~~~~g~i~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~~~s~li~~~~~lG  377 (432)
T 1gpl_A          321 RWRYKVSVTLSG---KKVTGHILVSLFGNKGNSKQYE-----------------IFK---GTLKPDSTHSNEFDSDVDVG  377 (432)
T ss_dssp             CEEEEEEEEEEE---CCEEEEEEEEEEESSCEEEEEE-----------------EEE---EEECTTCEEEEEEEESSCCC
T ss_pred             cceeEEEEEEcC---CceeEEEEEEEEcCCCCceeEE-----------------ecc---cccCCCcEEEEEEeCCCCCC
Confidence            345899999987   7999999999999999864433                 221   25999999999986444348


Q ss_pred             CcEEEEEEEc-C-----CCCceeeEEEEEeeeCCCCCeEEEEeceecCCCccee
Q 029912          114 PICYLYLKLG-G-----EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHG  161 (185)
Q Consensus       114 ~IC~l~L~rd-G-----sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg  161 (185)
                      +|-.|.|... .     ...|+.+.|+|..  +.+.. ..|==+..+-+++--.
T Consensus       378 ~l~~v~~~W~~~~~~~~~~~~~i~~I~v~~--~e~~~-~~fC~~~~~~~~~~~~  428 (432)
T 1gpl_A          378 DLQMVKFIWYNNVINPTLPRVGASKIIVET--NVGKQ-FNFCSPETVREEVLLT  428 (432)
T ss_dssp             SEEEEEEEEEESSCCTTCCEEEEEEEEEEC--TTSCE-EEEECSCCEETTCCEE
T ss_pred             CceEEEEEEEcCCCCCCCCeEEEEEEEEEe--CCCCC-ceecCCCccccCceec
Confidence            9999995444 3     2789999999973  44443 3333333454554333

>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}

Probab=96.34  E-value=0.0005  Score=61.77  Aligned_cols=108  Identities=10%  Similarity=0.094  Sum_probs=79.5

Q ss_pred             CccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCC
Q 029912           34 NCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVS  113 (185)
Q Consensus        34 ~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~  113 (185)
                      ...|.|+|.|+.  .++|+..|+|+|.+.+|+.-...                 |.+   +.||++++++|-+.-+-..+
T Consensus       339 ~~~Y~v~v~~~~--~~~t~g~i~v~L~G~~g~s~~~~-----------------l~~---~~~~~g~~~s~li~~~~dlG  396 (452)
T 1w52_X          339 SWRYRVSITLAG--SGKANGYLKVTLRGSNGNSKQYE-----------------IFK---GSLQPDSSYTLDVDVNFIIG  396 (452)
T ss_dssp             CEEEEECCBCCS--SSCCEECBCCCBCCSSCCCCCCC-----------------CCC---EECCSSCCCCEEEEESSCCC
T ss_pred             ceeeEEEEEEcC--CcceeeEEEEEEEcCCCCcceEe-----------------ccc---cccCCCCEEEEEEECCCCCC
Confidence            445899999974  57999999999999999864322                 322   26999999999986443348


Q ss_pred             CcEEEEEEEcC------CCCceeeEEEEEeeeCCCCCeEEEEeceecCCCcceeecCC
Q 029912          114 PICYLYLKLGG------EDDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGSDIC  165 (185)
Q Consensus       114 ~IC~l~L~rdG------sdgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg~n~C  165 (185)
                      +|-.|.|....      ...|+.+.|+|..  +.+.....|=-++|+-+++--.+.-|
T Consensus       397 ~l~~v~~~W~~~~~~~~~~~~~i~~I~V~~--~e~~~~~~fC~~~~~~~~~~~~~~~~  452 (452)
T 1w52_X          397 KIQEVKFVWNKTVLNLSKPQLGASRITVQS--GADGTEYKFCGSGTVQDNVEQSLYPC  452 (452)
T ss_dssp             CCCCBCCCBCCSSCCSCCCCCCCSBCCCCB--SSSCCCCCEECCSCCCSSCCCCCEEC
T ss_pred             CceEEEEEEECCCCCCCCCeEEEEEEEEEe--CCCCCeEEecCCCccccCceecccCC
Confidence            99999855443      2799999999973  55555577888999988765444333

>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}

Probab=87.45  E-value=4.8  Score=39.88  Aligned_cols=75  Identities=11%  Similarity=0.088  Sum_probs=52.0

Q ss_pred             eeeeee--ecCCCCCCcEEEEEEEcCCCCceeeEEEEEeeeC-CCCCeEEEEeceecCCCc--cee----ecCC--CCCC
Q 029912          101 VDEFQV--TGPCVVSPICYLYLKLGGEDDWRPGFAQVRVLEG-SHHSSEYFYFRRYLPRHV--WHG----SDIC--DREV  169 (185)
Q Consensus       101 ~D~F~v--~GpC~~~~IC~l~L~rdGsdgW~pe~V~V~~~~g-~~~~~~~F~v~~wLp~~v--wyg----~n~C--~~~~  169 (185)
                      ...|+|  .-+...|.|=.+.++....+.|||++|+|.   + +......|++|+||...-  .++    .|..  +++ 
T Consensus        92 ~~~~~v~f~~~~~~G~~gav~v~n~~~~e~fl~~i~l~---~~p~~g~~~F~c~sWv~~~~~~~~~riff~n~~ylp~~-  167 (853)
T 2iuj_A           92 EEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILE---DIPNHGTIHFICNSWVYNSKHYKTDRIFFANNTYLPSE-  167 (853)
T ss_dssp             EEEEEEEEECCSSSCCEEEEEEEECSSSCEEEEEEEEC---CCTTSCCEEEEEEEEECBTTSCSSCEEEECSCCCCGGG-
T ss_pred             ceEEEEEeeccccCCCceEEEEEecCCccceEeEEEEe---ecCCCCcEEEEecccccCCCCCCCCeEEEeCCccCccc-
Confidence            346888  456667999999998877899999999995   4 431348899999997522  111    2222  224 


Q ss_pred             Ccccccccce
Q 029912          170 TPFGIKHKRK  179 (185)
Q Consensus       170 ~~~g~~~~~~  179 (185)
                      +|-|+|+-|+
T Consensus       168 tp~~l~~~R~  177 (853)
T 2iuj_A          168 TPAPLVKYRE  177 (853)
T ss_dssp             SCTTTHHHHH
T ss_pred             CCHHHHHHHH
Confidence            7888876553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	185
d2p0ma2	111	b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Orycto	8e-04

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 111

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 35.4 bits (81), Expect = 8e-04
 Identities = 19/121 (15%), Positives = 34/121 (28%), Gaps = 26/121 (21%)

Query: 37  YAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPF 96
           Y V + T  +  A + N V L          L                            
Sbjct: 3   YRVCVSTGASIYAGSKNKVELWLVGQHGEVELGS----------------------CLRP 40

Query: 97  QACNVDEFQVTGPCVVSPICYLYL---KLGGEDDWRPGFAQVRVLEGSHHSSEYFYFRRY 153
                +EF+V     +  + ++ L       ED W   +  V+ L  +     +F   R+
Sbjct: 41  TRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAWFCNWISVQALGAAEDKY-WFPCYRW 99

Query: 154 L 154
           +
Sbjct: 100 V 100

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	185
d2p0ma2	111	15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T	99.84
d1ca1a2	121	Alpha-toxin, C-terminal domain {Clostridium perfri	99.83
d1olpa2	121	Alpha-toxin, C-terminal domain {Clostridium absonu	99.82
d1rp1a1	113	Pancreatic lipase, C-terminal domain {Dog (Canis f	99.33
d1bu8a1	114	Pancreatic lipase, C-terminal domain {Rat (Rattus	99.32
d1gpla1	112	Pancreatic lipase, C-terminal domain {Guinea pig (	98.73

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.84  E-value=1.8e-20  Score=139.55  Aligned_cols=99  Identities=18%  Similarity=0.211  Sum_probs=85.5

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI  115 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I  115 (185)
                      .|+|+|+||....|||+++|+|.|.+.+|..-...                 |     +.|||+++|+|.+..+...++|
T Consensus         2 ~Y~I~v~TG~~~~AGT~a~V~i~l~G~~G~s~~~~-----------------l-----~~f~rg~~d~F~~~~~~~lG~i   59 (111)
T d2p0ma2           2 VYRVCVSTGASIYAGSKNKVELWLVGQHGEVELGS-----------------C-----LRPTRNKEEEFKVNVSKYLGSL   59 (111)
T ss_dssp             EEEEEEEECSSSSCCCSSEEEEEEEESSCEEEEEE-----------------E-----ECCCTTCEEEEEEECSSCCCSE
T ss_pred             eEEEEEEECCCCCCCCCCeEEEEEEECCCCCCCcC-----------------c-----cccccCcEEEEEEEeeccccce
Confidence            49999999999999999999999999999765432                 3     3499999999999998766999


Q ss_pred             EEEEEEEcCC---CCceeeEEEEEeeeCCCCCeEEEEeceecCCC
Q 029912          116 CYLYLKLGGE---DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRH  157 (185)
Q Consensus       116 C~l~L~rdGs---dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~  157 (185)
                      ..|.|.++++   ++||+++|+|+. ...+...+.|++++||..|
T Consensus        60 ~~i~i~~d~~g~~~~W~l~~V~V~~-~~~~~~~~~Fpc~~Wl~~d  103 (111)
T d2p0ma2          60 LFVRLRKKHFLKEDAWFCNWISVQA-LGAAEDKYWFPCYRWVVGD  103 (111)
T ss_dssp             EEEEEEEECSSSCCCEEEEEEEEEE-SSSSCCCEEEEEEEEECSS
T ss_pred             EEEEEEECCCCCCCCeEEEEEEEEe-cCCCCeEEEEEcCceECCC
Confidence            9999999997   999999999984 2234556899999999765

>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium perfringens, different strains [TaxId: 1502]

Probab=99.83  E-value=2.1e-20  Score=142.03  Aligned_cols=107  Identities=11%  Similarity=0.091  Sum_probs=89.9

Q ss_pred             CCccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCC-
Q 029912           33 ENCTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCV-  111 (185)
Q Consensus        33 ~~C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~-  111 (185)
                      +-=.|+|+|+||....|||+++|+|.|.+.+|+.-...                 |+++ .+.|||+++|+|.+..+.. 
T Consensus         5 ~~~~~~v~V~TG~~~~AGTda~V~i~l~G~~G~s~~~~-----------------L~~~-~~~Ferg~~d~F~v~~~d~~   66 (121)
T d1ca1a2           5 NVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKTQEWE-----------------MDNP-GNDFMTGSKDTYTFKLKDEN   66 (121)
T ss_dssp             CCCEEEEEEEECCSTTCCCCSEEEEEEEETTSCEEEEE-----------------CCCS-SSCSCTTCEEEEEEECSCSS
T ss_pred             cceeEEEEEEeCCCCCCCCCCeEEEEEEeCCCCeeeEE-----------------ecCC-CccccCCcEEEEEEEeCCcC
Confidence            34579999999999999999999999999999765543                 6654 4779999999999997762 


Q ss_pred             --CCCcEEEEEEEcCC----CCceeeEEEEEeeeCCCCCeEEEEeceecCCCcce
Q 029912          112 --VSPICYLYLKLGGE----DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWH  160 (185)
Q Consensus       112 --~~~IC~l~L~rdGs----dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwy  160 (185)
                        .++|..|.|.+++.    ++|++++|+|..   .....+.|++++||..+..|
T Consensus        67 ~~lG~i~ki~i~hd~~g~~~~~W~l~~V~v~~---~~~~~~~F~~nrWl~~~~~~  118 (121)
T d1ca1a2          67 LKIDDIQNMWIRKRKYTAFPDAYKPENIKVIA---NGKVVVDKDINEWISGNSTY  118 (121)
T ss_dssp             CCGGGEEEEEEEEECSSSSCCCBCEEEEEEEE---TTEEEEEEECCSCBCSSCEE
T ss_pred             CCcCCceEEEEEEcCccccCchhheEEEEEEC---CCCeEEEeECCEEECCCCEE
Confidence              38999999999875    679999999973   23456899999999988655

>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium absonum [TaxId: 29369]

Probab=99.82  E-value=4.5e-20  Score=139.99  Aligned_cols=105  Identities=14%  Similarity=0.161  Sum_probs=88.2

Q ss_pred             ccEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCC---C
Q 029912           35 CTYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPC---V  111 (185)
Q Consensus        35 C~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC---~  111 (185)
                      =.|.|+|+||....|||+++|+|.|.+.+|+.-.+.                 |+++ .+.||||++|+|.+..+.   .
T Consensus         7 ~~~~V~v~Tg~~~~AGT~a~V~i~l~G~~g~s~~~~-----------------L~~~-~~~Ferg~~d~F~v~~~d~~~~   68 (121)
T d1olpa2           7 NEIVVMIKTADVQDAGTDNYIYFGIETKDGVKEEWA-----------------LDNP-GNDFTRNQEGTYTLKLKNKNTK   68 (121)
T ss_dssp             SEEEEEEEECSSTTCCCCSEEEEEEEETTCCEEEEE-----------------CCCS-SCCSCTTCEEEEEEECSCSSCC
T ss_pred             cEEEEEEEECCCCCCCCcceEEEEEEECCCCcccEE-----------------ecCC-CcccccCCeEEEEEEeCCccCC
Confidence            369999999999999999999999999999765554                 6554 578999999999998765   2


Q ss_pred             CCCcEEEEEEEcCC----CCceeeEEEEEeeeCCCCCeEEEEeceecCCCcce
Q 029912          112 VSPICYLYLKLGGE----DDWRPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWH  160 (185)
Q Consensus       112 ~~~IC~l~L~rdGs----dgW~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwy  160 (185)
                      .++|..|.|.+++.    ++|++++|+|..   .....+.|+|++||..+-.|
T Consensus        69 lG~i~~i~i~hd~~g~~~~~W~l~~V~v~~---~~~~~~~F~~nrWl~~~~~~  118 (121)
T d1olpa2          69 YSDIKNMWIRDEKLTVATDGWKPSYVKVIA---GDKVRLEKNINEWISGGTTY  118 (121)
T ss_dssp             GGGEEEEEEEEECSSSSCCEECEEEEEEEE---TTEEEEEEECCSCEETTEEE
T ss_pred             cCceEEEEEEEcCCCCCCcceeEEEEEEEC---CCCeEEEEECCEEECCCcEE
Confidence            48999999999864    679999999963   23456899999999987655

>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=99.33  E-value=1.5e-12  Score=96.60  Aligned_cols=101  Identities=11%  Similarity=0.122  Sum_probs=82.5

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecC-CCCCC
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGP-CVVSP  114 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~Gp-C~~~~  114 (185)
                      .|.|+|+||   +|+|+++|+|.|++..|+.-...                 |.   .+.|||+++|+|.+..+ .+ |+
T Consensus         3 rY~V~V~t~---gagT~a~v~i~L~G~~g~t~~~~-----------------l~---~~~f~~g~~~~f~i~~~~~l-G~   58 (113)
T d1rp1a1           3 RYGVSITLS---GKRATGQAKVALFGSKGNTHQFN-----------------IF---KGILKPGSTHSNEFDAKLDV-GT   58 (113)
T ss_dssp             EEEEEEEEE---ESCEEEEEEEEEEETTEECCCEE-----------------EE---EEEECTTCEEEEEEEESSCC-SS
T ss_pred             EEEEEEEEC---CCCccceEEEEEEcCCCCcccEE-----------------Ec---ceeEcCCCEEEEEEEeCCCC-CC
Confidence            499999998   68999999999999999743222                 21   24699999999999865 65 99


Q ss_pred             cEEEEEEEcCC---CCc---eeeEEEEEeeeCCCCCeEEEEeceecCCCcceee
Q 029912          115 ICYLYLKLGGE---DDW---RPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHGS  162 (185)
Q Consensus       115 IC~l~L~rdGs---dgW---~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg~  162 (185)
                      +=.|.|.+|++   ++|   +.+.|+|+.  +.......|-.++|+.+|+-..-
T Consensus        59 l~~v~i~hdn~g~~~~w~~~~v~~V~V~~--~~~g~~~~Fc~~~~v~~~v~~~l  110 (113)
T d1rp1a1          59 IEKVKFLWNNNVVNPTFPKVGAAKITVQK--GEEKTVHSFCSESTVREDVLLTL  110 (113)
T ss_dssp             EEEEEEEEEEC--CTTCCCEEEEEEEEEE--TTCSSC-EEECSCEECTTCCEEE
T ss_pred             cEEEEEEECCCCCCCccccceeEEEEEEc--CCCCcEEEECcCceEccCceecc
Confidence            99999999977   788   999999984  66667799999999999875543

>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.32  E-value=2.7e-12  Score=95.07  Aligned_cols=102  Identities=9%  Similarity=0.021  Sum_probs=80.6

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI  115 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I  115 (185)
                      .|.|+|+||..  ++|+++|+|.|++..|+.=.+.                 |   ..+.||||++|+|.+..+=..|++
T Consensus         3 rY~V~V~t~~~--~gT~~~V~i~L~G~~G~s~~~~-----------------l---~~~~f~rG~~~~f~~~~~~~lG~l   60 (114)
T d1bu8a1           3 RYKVSVTLSGA--KKLSGYILVALYGNNGNSKQYE-----------------I---FKGSLKPEARHVRDIDVDINVGEI   60 (114)
T ss_dssp             EEEEEEEEECS--SCEEEEEEEEEEETTEECCCEE-----------------E---EEEEECTTCEEEEEEEESSCCCSE
T ss_pred             EEEEEEEECCC--CCcCceEEEEEEeCCCCcccCc-----------------c---chhhccCCCceEEEEecCcCCCCc
Confidence            49999999875  6999999999999999732221                 2   124699999999999986434999


Q ss_pred             EEEEEEEcCC---CCc---eeeEEEEEeeeCCCCCeEEEEeceecCCCccee
Q 029912          116 CYLYLKLGGE---DDW---RPGFAQVRVLEGSHHSSEYFYFRRYLPRHVWHG  161 (185)
Q Consensus       116 C~l~L~rdGs---dgW---~pe~V~V~~~~g~~~~~~~F~v~~wLp~~vwyg  161 (185)
                      =.|.|.+|++   ++|   +.+.|+|..  +.......|..++|+.+|+...
T Consensus        61 ~~i~i~hdn~g~~~~W~~~~l~~V~V~~--~~~g~~~~Fc~~~~v~~~~~~~  110 (114)
T d1bu8a1          61 QKVKFLWNNKVINLFRPTLGASQITVQS--GVDGKEYNFCSSDTVREDVLQS  110 (114)
T ss_dssp             EEEEEEEEC------CCCBEEEEEEEEE--TTTCCEEEEECCCCBCTTCCEE
T ss_pred             EEEEEEECCCcCCCcccccceEEEEEEe--CCCCCEEEEecCceEcCCceee
Confidence            9999999987   788   589999974  6666779999999999987543

>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.73  E-value=2.1e-08  Score=74.31  Aligned_cols=92  Identities=8%  Similarity=0.034  Sum_probs=71.4

Q ss_pred             cEEEEEEcCCCCCCCCCcceEEEEecCCCCeeEEeecccccccccCCCCCccCCCCCCCCCcCCceeeeeeecCCCCCCc
Q 029912           36 TYAVTIETTCTKGAETSNPVSLRFGDTKSTDILVKHLNSKHVRQVDPLWPTVLDDVPRKPFQACNVDEFQVTGPCVVSPI  115 (185)
Q Consensus        36 ~YtV~IkTgc~~~agTdd~IsI~fgDa~Gn~v~~~~L~~~~~~~~~~~~~~gLd~~~~~~FErcs~D~F~v~GpC~~~~I  115 (185)
                      .|.|+|+|+   +++|+++|+|.|++..|+.-...                 |..   +.|||+++|+|-+.-|=..|++
T Consensus         3 rY~V~V~t~---g~~T~~~V~i~L~G~~G~s~~~~-----------------L~~---~~f~~g~t~tf~i~~~~~lG~l   59 (112)
T d1gpla1           3 RYKVSVTLS---GKKVTGHILVSLFGNKGNSKQYE-----------------IFK---GTLKPDSTHSNEFDSDVDVGDL   59 (112)
T ss_dssp             EEEEEEEEE---ECCEEEEEEEEEEESSCEEEEEE-----------------EEE---EEECTTCEEEEEEEESSCCCSE
T ss_pred             EEEEEEEEc---CCCccceEEEEEEECCCCcccEE-----------------EcC---ccccCCCEEEEEEEeCCCCCCc
Confidence            499999996   57899999999999999754332                 211   3599999999999987445999


Q ss_pred             EEEEEEEcCC---CCce---eeEEEEEeeeCCCCCeEEEEeceec
Q 029912          116 CYLYLKLGGE---DDWR---PGFAQVRVLEGSHHSSEYFYFRRYL  154 (185)
Q Consensus       116 C~l~L~rdGs---dgW~---pe~V~V~~~~g~~~~~~~F~v~~wL  154 (185)
                      -+|.+.++.+   ++|+   .+.|+|.  .| ....+.| +.++.
T Consensus        60 ~~v~~~hdnsg~~~~w~~~~~~~I~V~--~g-~g~~~~F-C~~~~  100 (112)
T d1gpla1          60 QMVKFIWYNNVINPTLPRVGASKIIVE--TN-VGKQFNF-CSPET  100 (112)
T ss_dssp             EEEEEEEEESSCCTTCCEEEEEEEEEE--CT-TSCEEEE-ECSCC
T ss_pred             EEEEEEECCCCCCCCcccccCEEEEEE--CC-CCeEEEe-cCccc
Confidence            9999999987   8998   6777775  34 3445666 65554