Citrus Sinensis ID: 029996
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 184 | ||||||
| 224143162 | 185 | predicted protein [Populus trichocarpa] | 0.951 | 0.945 | 0.611 | 3e-58 | |
| 356496559 | 189 | PREDICTED: uncharacterized protein LOC10 | 0.929 | 0.904 | 0.549 | 2e-51 | |
| 351726488 | 182 | uncharacterized protein LOC100527050 [Gl | 0.923 | 0.934 | 0.549 | 1e-50 | |
| 124360678 | 178 | hypothetical protein MtrDRAFT_AC157893g4 | 0.913 | 0.943 | 0.541 | 9e-50 | |
| 357501467 | 226 | hypothetical protein MTR_7g006210 [Medic | 0.913 | 0.743 | 0.541 | 1e-49 | |
| 255548894 | 180 | conserved hypothetical protein [Ricinus | 0.929 | 0.95 | 0.586 | 4e-49 | |
| 297798370 | 195 | hypothetical protein ARALYDRAFT_491093 [ | 0.945 | 0.892 | 0.519 | 9e-43 | |
| 255538478 | 148 | conserved hypothetical protein [Ricinus | 0.728 | 0.905 | 0.661 | 1e-42 | |
| 22329188 | 195 | phosphatidylinositol glycan, class H [Ar | 0.945 | 0.892 | 0.519 | 1e-41 | |
| 449456883 | 180 | PREDICTED: uncharacterized protein LOC10 | 0.940 | 0.961 | 0.544 | 1e-41 |
| >gi|224143162|ref|XP_002324866.1| predicted protein [Populus trichocarpa] gi|222866300|gb|EEF03431.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 132/175 (75%)
Query: 7 IENRKYTYRRELKWPVEAIDIHHVVVRRSRASRFFIYVCLVIGLSNAVFLVLSKHESVTI 66
I NR Y Y E KWP EAID+HHV+VR+S FF++ +I L+NA +L L K++S+++
Sbjct: 6 IANRGYGYLHERKWPSEAIDMHHVMVRKSNGKGFFVFFSALIVLANASYLFLVKNKSISV 65
Query: 67 LFWSFILSASLLKLFLWKPVKQESVIIMPALGVQLETHFLSGRTTRRFFPIGKILRPVLL 126
L WSF S L+KL WK V +ESV++MP GVQLETH+LSGR RRF PI KIL+PVLL
Sbjct: 66 LLWSFFFSVFLVKLMFWKRVMKESVMVMPTFGVQLETHYLSGRIVRRFVPIDKILKPVLL 125
Query: 127 ECVTPLTCYWSLSLIVRDEGELMLVFKELRPPVKMLVPIWKALCATIDCKESPDA 181
ECV+P+TCYWSLSL++R E ELMLVFKEL+PPVKML+PIWKALC KE D
Sbjct: 126 ECVSPITCYWSLSLLLRGEAELMLVFKELQPPVKMLIPIWKALCDASGIKEGSDT 180
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356496559|ref|XP_003517134.1| PREDICTED: uncharacterized protein LOC100795421 [Glycine max] | Back alignment and taxonomy information |
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| >gi|351726488|ref|NP_001237896.1| uncharacterized protein LOC100527050 [Glycine max] gi|255631446|gb|ACU16090.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|124360678|gb|ABN08667.1| hypothetical protein MtrDRAFT_AC157893g40v2 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357501467|ref|XP_003621022.1| hypothetical protein MTR_7g006210 [Medicago truncatula] gi|355496037|gb|AES77240.1| hypothetical protein MTR_7g006210 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|255548894|ref|XP_002515503.1| conserved hypothetical protein [Ricinus communis] gi|223545447|gb|EEF46952.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297798370|ref|XP_002867069.1| hypothetical protein ARALYDRAFT_491093 [Arabidopsis lyrata subsp. lyrata] gi|297312905|gb|EFH43328.1| hypothetical protein ARALYDRAFT_491093 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|255538478|ref|XP_002510304.1| conserved hypothetical protein [Ricinus communis] gi|223551005|gb|EEF52491.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|22329188|ref|NP_195278.2| phosphatidylinositol glycan, class H [Arabidopsis thaliana] gi|18253011|gb|AAL62432.1| putative protein [Arabidopsis thaliana] gi|22136396|gb|AAM91276.1| putative protein [Arabidopsis thaliana] gi|332661127|gb|AEE86527.1| phosphatidylinositol glycan, class H [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449456883|ref|XP_004146178.1| PREDICTED: uncharacterized protein LOC101204797 [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 184 | ||||||
| TAIR|locus:2127938 | 195 | AT4G35530 [Arabidopsis thalian | 0.907 | 0.856 | 0.517 | 5.3e-40 | |
| DICTYBASE|DDB_G0277289 | 237 | pigH "phosphatidylinositol gly | 0.657 | 0.510 | 0.310 | 1.7e-08 | |
| ZFIN|ZDB-GENE-040718-303 | 181 | pigh "phosphatidylinositol gly | 0.695 | 0.707 | 0.237 | 9.9e-05 | |
| UNIPROTKB|H0YLY9 | 187 | PIGH "Phosphatidylinositol N-a | 0.548 | 0.540 | 0.247 | 0.00032 | |
| UNIPROTKB|Q14442 | 188 | PIGH "Phosphatidylinositol N-a | 0.554 | 0.542 | 0.238 | 0.00059 | |
| RGD|1311438 | 188 | Pigh "phosphatidylinositol gly | 0.554 | 0.542 | 0.229 | 0.00059 | |
| UNIPROTKB|I3LQK4 | 197 | PIGH "Uncharacterized protein" | 0.554 | 0.517 | 0.229 | 0.0007 |
| TAIR|locus:2127938 AT4G35530 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 89/172 (51%), Positives = 114/172 (66%)
Query: 7 IENRKYTYRREL--KWPVEAIDIHHXXXXXXXXXXFFIYVCL---VIGLSNAVFLVLSKH 61
+ N++YTY E K EAIDIHH + L ++ L+++++ +L K
Sbjct: 6 VSNKRYTYIHESGSKSTREAIDIHHVIINGSSGTGYARRWGLGFFLVFLASSMYFLLGKD 65
Query: 62 ESVTILFWSFILSASLLKLFLWKPVKQESVIIMPALGVQLETHFLSGRTTRRFFPIGKIL 121
L W +LS L+ L K VK+ESVII+P G+QLET +LSG+T RF PI KIL
Sbjct: 66 NPARTLSWGCLLSGFLVMLHSRKFVKKESVIILPTFGIQLETQYLSGKTVSRFIPIDKIL 125
Query: 122 RPVLLECVTPLTCYWSLSLIVRDEGELMLVFKELRPPVKMLVPIWKALCATI 173
+PVL+ECVTP+TCYWSLSL +R E +L LVFKELRPP+KMLVPIWKALCA I
Sbjct: 126 KPVLVECVTPITCYWSLSLFLRGEEQLTLVFKELRPPLKMLVPIWKALCAAI 177
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| DICTYBASE|DDB_G0277289 pigH "phosphatidylinositol glycan, class H" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040718-303 pigh "phosphatidylinositol glycan anchor biosynthesis, class H" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|H0YLY9 PIGH "Phosphatidylinositol N-acetylglucosaminyltransferase subunit H" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q14442 PIGH "Phosphatidylinositol N-acetylglucosaminyltransferase subunit H" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| RGD|1311438 Pigh "phosphatidylinositol glycan anchor biosynthesis, class H" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LQK4 PIGH "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pg.C_LG_XVIII0411 | hypothetical protein (185 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| gw1.XII.204.1 | • | 0.899 | |||||||||
| gw1.IV.1202.1 | • | 0.800 | |||||||||
| grail3.0001027901 | • | 0.800 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 184 | |||
| pfam10181 | 66 | pfam10181, PIG-H, GPI-GlcNAc transferase complex, | 3e-18 |
| >gnl|CDD|192473 pfam10181, PIG-H, GPI-GlcNAc transferase complex, PIG-H component | Back alignment and domain information |
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Score = 74.1 bits (183), Expect = 3e-18
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 90 SVIIMPALGVQLETHFLSGRTT-RRFFPIGKILRPVLLECVTPLTCYWSLSLIVRDEGEL 148
S++++ LGVQL + +LSGR+T RF PI KI+ V+ E T + L ++V+ E L
Sbjct: 1 SLLVLRGLGVQLSSKYLSGRSTSTRFIPIDKIIDIVINEGFTGFQVIFYLCVLVKGEASL 60
Query: 149 MLVFKE 154
+++F E
Sbjct: 61 VVLFPE 66
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PIG-H is a family of conserved proteins that complexes with three other proteins to form the GPI-GnT (glycosylphosphatidylinositol anchor biosynthesis transferase) complex. It appears to be a peripheral membrane protein facing the cytoplasm involved in the first step in GPI anchor formation. Length = 66 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 184 | |||
| KOG4551 | 184 | consensus GPI-GlcNAc transferase complex, PIG-H co | 100.0 | |
| PF10181 | 69 | PIG-H: GPI-GlcNAc transferase complex, PIG-H compo | 99.94 |
| >KOG4551 consensus GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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Probab=100.00 E-value=5.3e-44 Score=293.59 Aligned_cols=175 Identities=39% Similarity=0.633 Sum_probs=161.1
Q ss_pred ecceeEEEEeccC--CCCCcceeEEEEecCCc------cchhhhHHHHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHHH
Q 029996 8 ENRKYTYRRELKW--PVEAIDIHHVVVRRSRA------SRFFIYVCLVIGLSNAVFLVLSKHESVTILFWSFILSASLLK 79 (184)
Q Consensus 8 ~~~~yty~h~~~~--p~~~~dih~~~v~~s~~------~~~~~~~~~v~lla~~~~~~l~~~~~~~~~l~s~~~~~~l~~ 79 (184)
+|+||||.|++.. .-+..|+|+..+.-+-. +.+...+|.+|+.+||++.+. .+|++....|.+.++-++++
T Consensus 1 ~~~~~t~~~~~g~~lt~~r~~~~p~~ief~~~t~~~s~~~l~f~lcf~~~~~yG~~~l~-~~~~~~~~~~~~~LsglL~~ 79 (184)
T KOG4551|consen 1 SNKRYTYIHESGSKLTRERIDIHPVIIEFSSGTGYASRWGLGFFLCFLASSMYGIIHLK-QDNPARTLSWGCLLSGLLVM 79 (184)
T ss_pred CCcceeeeecccchhhhhhhccCcceEEeecCCchhcccchhhHHHHHHHHHhhhhhhh-cCCchHHHHHHHHHHHHHHH
Confidence 5899999999864 55689999998865433 557888999999999999988 58889889999999999999
Q ss_pred HHhhcccceeeEEEEcCceeEEEEEeecCceeeEEeecCCccceEEeeceeCcEEEEEEEEEEecCCeEE-eecccCCCC
Q 029996 80 LFLWKPVKQESVIIMPALGVQLETHFLSGRTTRRFFPIGKILRPVLLECVTPLTCYWSLSLIVRDEGELM-LVFKELRPP 158 (184)
Q Consensus 80 ~l~~~~v~~ESLlVi~~lGVQlst~y~sG~~~~rFIp~~kI~diVINEa~~~~~V~~yLaliv~ge~~lv-vvF~~l~Pr 158 (184)
+..+|.|++|||+|+|+||||++++|++|+++++|||+|||+|||||||++++.|.||++++.+++.|.+ +|||.++||
T Consensus 80 lH~~k~V~~Esl~Ii~~lGIQ~~~sy~sgK~ss~fIpidkI~divinE~v~~q~vcYy~~il~~~~~E~hv~VF~~l~Pr 159 (184)
T KOG4551|consen 80 LHSRKFVKKESLIIIPTLGIQLETSYLSGKTSSRFIPIDKILDIVINECVTPQIVCYYSLILFLRGEEQHVLVFKELRPR 159 (184)
T ss_pred HHHHhhcCcceEEEEcccceEEEeeeccCcccceeeEcchhHHhHHhhccchhHhhHhHHhhhcCCcccchhhhhhcCch
Confidence 9999999999999999999999999999999999999999999999999999999999999999987775 599999999
Q ss_pred ccchHHHHHhhhhhhcCCCCCCcCC
Q 029996 159 VKMLVPIWKALCATIDCKESPDADD 183 (184)
Q Consensus 159 ~~~L~~Vyr~~~~~l~~~~~~~~~~ 183 (184)
++||++|||++|++|.+++++.|++
T Consensus 160 ld~Lv~Vyk~~~~~la~~~~s~t~~ 184 (184)
T KOG4551|consen 160 LDMLVPVYKALCAALATDHQSETIA 184 (184)
T ss_pred HHHHHHHHHHHHHHHccCcccccCC
Confidence 9999999999999999999999974
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| >PF10181 PIG-H: GPI-GlcNAc transferase complex, PIG-H component; InterPro: IPR019328 This entry represents a conserved domain found in PIG-H proteins | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00