Citrus Sinensis ID: 030018

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
Protein Sequence
MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDnraaaasnwsdggggaessprtsaasgddwRSAFdaaangpvslrsysrsasnghsrrysdpaengdvrsgsnsgsrrtpnrvpppppptqsgskyf
Flexible Loop (DISEMBL)
MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELlqedqnvkrrrDRYQKQSELLSKLTRQLSIHDNRAaaasnwsdggggAESSPRTSAASGDDWRSAFDAAangpvslrsysrsasnghsrrysdpaengdvrsgsnsgsrrtpnrvpppppptqsgskyf
Low Complexity Region (SEG)
MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVppppppTQSGSKYF
Disordered region (IsUnstruct)
*****RGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLY***********************************************************************************************************************************************
Disordered Region (DISOPRED)
****VRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRA**********************************************************************************************
Disordered Region (DISEMBL)
MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRA************************DDWRSAFDAAANGPVSLR****************************************************
Disordered Region (DISPRO)
MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQLSIHDNRAAA********************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARxxxxxxxxxxxxxxxxxxxxxSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSAFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSGSKYF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	184	2.2.26 [Sep-21-2011]
Q9LQ55	920	Dynamin-2B OS=Arabidopsis	yes	no	0.961	0.192	0.740	1e-65
Q9SE83	914	Dynamin-2A OS=Arabidopsis	no	no	0.978	0.196	0.729	3e-62
Q8LF21	614	Dynamin-related protein 1	no	no	0.385	0.115	0.366	3e-06
Q39828	610	Dynamin-related protein 5	no	no	0.385	0.116	0.323	5e-06
Q84XF3	610	Dynamin-related protein 1	no	no	0.385	0.116	0.323	2e-05
Q8S3C9	612	Dynamin-related protein 1	no	no	0.423	0.127	0.333	2e-05
Q39821	610	Dynamin-related protein 1	no	no	0.385	0.116	0.309	2e-05
P42697	610	Dynamin-related protein 1	no	no	0.385	0.116	0.323	3e-05
Q9FNX5	624	Dynamin-related protein 1	no	no	0.423	0.125	0.333	9e-05

>sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2

 Score =  249 bits (635), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/185 (74%), Positives = 151/185 (81%), Gaps = 8/185 (4%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSLA NV KAVVLCQVEK+KEDMLNQLYSS+ A    RIE L+QEDQ
Sbjct: 740 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQEDQ 799

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRS 119
           NVKRRRDRYQKQS LLSKLTRQLSIHDNRAAAAS+WSD  G  ESSPRT+  +SG+DW +
Sbjct: 800 NVKRRRDRYQKQSSLLSKLTRQLSIHDNRAAAASSWSDNSG-TESSPRTNGGSSGEDWMN 858

Query: 120 AFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRT-PNRVPPPPPPTQ 178
           AF+AAA+GP SL+ Y    S GHSRRYSDPA+NG+  SGS   SRRT PNR+PP PP  Q
Sbjct: 859 AFNAAASGPDSLKRY---GSGGHSRRYSDPAQNGEDSSGSGGSSRRTTPNRLPPAPP--Q 913

Query: 179 SGSKY 183
           SGS Y
Sbjct: 914 SGSSY 918

Putative microtubule-associated force-producing protein, able to bind and hydrolyze GTP.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 5EC: .EC: 5

>sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2

 Score =  237 bits (605), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/185 (72%), Positives = 148/185 (80%), Gaps = 5/185 (2%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSLA NV KAVVLCQVEKAKEDMLNQLYSS+ A    RIE L+QEDQ
Sbjct: 733 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQ 792

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTS-AASGDDWRS 119
           NVKRRR+RYQKQS LLSKLTRQLSIHDNRAAAAS++SD   G ESSPR S  +SGDDW +
Sbjct: 793 NVKRRRERYQKQSSLLSKLTRQLSIHDNRAAAASSYSD-NSGTESSPRASGGSSGDDWMN 851

Query: 120 AFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRS-GSNSGSRRTPNRVPPPPPPTQ 178
           AF++AANGP    S S+  S GHSRRYSDPA+NGD  S GS S  R TPNR+PP PPPT 
Sbjct: 852 AFNSAANGPSD--SLSKYGSGGHSRRYSDPAQNGDAASPGSGSNRRTTPNRLPPAPPPTG 909

Query: 179 SGSKY 183
           S  +Y
Sbjct: 910 SAYRY 914

Microtubule-associated force-producing protein involved in clathrin-mediated vesicle trafficking from the trans-Golgi network to the central vacuole. Able to bind and hydrolyze GTP. Binds specifically to phosphatidylinositol 3-phosphate (PtdIns3P).

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2

 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 39/71 (54%)

Query: 5   VRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKR 64
           V  Y   V ++L  ++ KAVV CQV +AK  +LN  Y+ VG +   ++  +L ED  +  
Sbjct: 530 VSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLME 589

Query: 65  RRDRYQKQSEL 75
           RR    K+ EL
Sbjct: 590 RRGTLAKRLEL 600

Microtubule-associated force-producing protein that is targeted to the growing edges of the cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance during pollen maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A OS=Glycine max PE=2 SV=1

 Score = 50.8 bits (120), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 38/71 (53%)

Query: 5   VRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKR 64
           +  Y   V  +L  ++ K++V CQV +AK  +L+  ++ +G   T R+  LL ED  +  
Sbjct: 525 ILSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIME 584

Query: 65  RRDRYQKQSEL 75
           RR    K+ EL
Sbjct: 585 RRSALAKRLEL 595

Microtubule-associated force-producing protein.

Glycine max (taxid: 3847)

>sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1

 Score = 49.3 bits (116), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%)

Query: 5   VRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKR 64
           V  Y   V   L  ++ K++V CQV +AK  +L+  ++ +G +  +++ +LL ED  V++
Sbjct: 525 VLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQ 584

Query: 65  RRDRYQKQSEL 75
           RR    K+ EL
Sbjct: 585 RRTSIAKRLEL 595

Putative microtubule-associated force-producing protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S3C9|DRP1D_ARATH Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2

 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           ++  V  Y + V  +L   + KAVV CQV +AK  +LN  Y+ +      R+ +LL E+ 
Sbjct: 523 IASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENP 582

Query: 61  NVKRRRDRYQKQSELLSK 78
            +  RR +  K+ EL  K
Sbjct: 583 ALMERRMQCAKRLELYKK 600

Putative microtubule-associated force-producing protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A OS=Glycine max PE=1 SV=1

 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 37/71 (52%)

Query: 5   VRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKR 64
           +  Y   V  +L  ++ K++V CQV +AK  +L+  ++ +G     R+  LL ED  +  
Sbjct: 525 ILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLNEDPAIME 584

Query: 65  RRDRYQKQSEL 75
           RR    K+ EL
Sbjct: 585 RRSALAKRLEL 595

Microtubule-associated force-producing protein that is targeted to the forming cell plate during cytokinesis. May be involved in attaching Golgi-derived vesicles to microtubules which direct vesicles to the forming cell plate during cytokinesis. Possesses intrinsic GTPase activity in vitro.

Glycine max (taxid: 3847)

>sp|P42697|DRP1A_ARATH Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3

 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%)

Query: 5   VRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKR 64
           V  Y   V   L  ++ K++V CQV +AK  +L+  ++ +G     R+  LL ED  +  
Sbjct: 525 VLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLNEDPAIME 584

Query: 65  RRDRYQKQSEL 75
           RR    K+ EL
Sbjct: 585 RRSAISKRLEL 595

Microtubule-associated force-producing protein that is targeted to the forming cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance and cell wall integrity with implications in vesicular trafficking, polar cell expansion, vascular formation, and other aspects of plant growth and development. Has a GTPase activity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1

 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           ++  V  Y   V ++L   + KA V CQV +AK  +LN  YS +  +   ++ +LL ED 
Sbjct: 535 IASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLLDEDP 594

Query: 61  NVKRRRDRYQKQSELLSK 78
            +  RR    K+ EL  K
Sbjct: 595 ALMDRRLECAKRLELYKK 612

Microtubule-associated force-producing protein that is targeted to the tubulo-vesicular network of the forming cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance and cell wall integrity with an implication in vesicular trafficking, polar cell expansion, and other aspects of plant growth and development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
225460010	931	PREDICTED: dynamin-2B [Vitis vinifera] g	1.0	0.197	0.795	4e-70
225465253	920	PREDICTED: dynamin-2B [Vitis vinifera] g	0.978	0.195	0.8	6e-70
147841234	938	hypothetical protein VITISV_043157 [Viti	1.0	0.196	0.795	6e-70
224127734	920	predicted protein [Populus trichocarpa]	0.956	0.191	0.784	2e-68
6625788	930	dynamin homolog [Astragalus sinicus]	0.978	0.193	0.789	4e-67
357470181	922	Dynamin-2B [Medicago truncatula] gi|3555	0.967	0.193	0.808	3e-65
51477379	921	DRP [Cucumis melo]	0.945	0.188	0.755	3e-65
224129484	915	predicted protein [Populus trichocarpa]	0.885	0.178	0.786	3e-64
224120026	917	predicted protein [Populus trichocarpa]	0.864	0.173	0.771	3e-64
449447543	928	PREDICTED: dynamin-2B-like [Cucumis sati	0.967	0.191	0.777	4e-64

>gi|225460010|ref|XP_002271285.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297734796|emb|CBI17030.3| unnamed protein product [Vitis vinifera]

 Score =  269 bits (687), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 148/186 (79%), Positives = 155/186 (83%), Gaps = 2/186 (1%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSLA NV KAVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELL EDQ
Sbjct: 746 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLLEDQ 805

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAAS-GDDWRS 119
           NVKRRR+RYQKQS LLSKLTRQLSIHDNRA AAS+WS+G GGAESSP+TS  S GDDWRS
Sbjct: 806 NVKRRRERYQKQSSLLSKLTRQLSIHDNRATAASSWSNGVGGAESSPKTSGPSGGDDWRS 865

Query: 120 AFDAAANGPVSLRS-YSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQ 178
           AFDAAANGPV   S  SRS SNGHSR YSDPA+NGDV SGSNS  R    R P PPP   
Sbjct: 866 AFDAAANGPVDYNSDLSRSGSNGHSRHYSDPAQNGDVSSGSNSSRRTPNRRPPAPPPSGS 925

Query: 179 SGSKYF 184
           SG K+F
Sbjct: 926 SGYKFF 931

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465253|ref|XP_002268311.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297739464|emb|CBI29646.3| unnamed protein product [Vitis vinifera]

 Score =  268 bits (686), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 148/185 (80%), Positives = 159/185 (85%), Gaps = 5/185 (2%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSLA NV KAVVLCQVEK+KEDMLNQLYSSV AQSTARIEELLQEDQ
Sbjct: 737 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSVSAQSTARIEELLQEDQ 796

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRS 119
           NVKRRR+R QKQS LL+KLT+QLSIHDNRAAAAS+ S   GGAESSPRT   +SGDDWRS
Sbjct: 797 NVKRRRERNQKQSSLLAKLTKQLSIHDNRAAAASS-SWSNGGAESSPRTPGPSSGDDWRS 855

Query: 120 AFDAAANGPV-SLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQ 178
           AFDAAANGP  S  + SRS +NGHSRRYSDP++NGD  SG NSGSRRTPNR+PP PP  Q
Sbjct: 856 AFDAAANGPTDSYSNSSRSGANGHSRRYSDPSQNGDANSGPNSGSRRTPNRLPPAPP--Q 913

Query: 179 SGSKY 183
           SGS Y
Sbjct: 914 SGSSY 918

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147841234|emb|CAN68973.1| hypothetical protein VITISV_043157 [Vitis vinifera]

 Score =  268 bits (686), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 148/186 (79%), Positives = 155/186 (83%), Gaps = 2/186 (1%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSLA NV KAVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELL EDQ
Sbjct: 753 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLLEDQ 812

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAAS-GDDWRS 119
           NVKRRR+RYQKQS LLSKLTRQLSIHDNRA AAS+WS+G GGAESSP+TS  S GDDWRS
Sbjct: 813 NVKRRRERYQKQSSLLSKLTRQLSIHDNRATAASSWSNGVGGAESSPKTSGPSGGDDWRS 872

Query: 120 AFDAAANGPVSLRS-YSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQ 178
           AFDAAANGPV   S  SRS SNGHSR YSDPA+NGDV SGSNS  R    R P PPP   
Sbjct: 873 AFDAAANGPVDYNSDLSRSGSNGHSRHYSDPAQNGDVSSGSNSSRRTPNRRPPAPPPSGS 932

Query: 179 SGSKYF 184
           SG K+F
Sbjct: 933 SGYKFF 938

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127734|ref|XP_002329164.1| predicted protein [Populus trichocarpa] gi|222870945|gb|EEF08076.1| predicted protein [Populus trichocarpa]

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/186 (78%), Positives = 155/186 (83%), Gaps = 10/186 (5%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSLA NV KAVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELLQEDQ
Sbjct: 735 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLQEDQ 794

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAES---SPRTSAASGDDW 117
           NVKRRR+RYQKQS LLSKLTRQLSIHDNRAAAAS+    G GAES   SPRT+ ++GDDW
Sbjct: 795 NVKRRRERYQKQSSLLSKLTRQLSIHDNRAAAASS-WSSGDGAESTTPSPRTNGSAGDDW 853

Query: 118 RSAFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPP--PPP 175
           RSAFDAAANGP+ + S SR ASNGHSR YS    NGDV +GSNS SRRTPNR P   PP 
Sbjct: 854 RSAFDAAANGPLDIGSLSRPASNGHSRYYS----NGDVSTGSNSSSRRTPNRTPNRFPPA 909

Query: 176 PTQSGS 181
           P QSGS
Sbjct: 910 PPQSGS 915

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6625788|gb|AAF19398.1|AF203882_1 dynamin homolog [Astragalus sinicus]

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 146/185 (78%), Positives = 155/185 (83%), Gaps = 5/185 (2%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSLA NV KA+VL QVEKAKEDMLNQLYSSV  QSTA+IEELL EDQ
Sbjct: 749 MSQEVRGYVEAVLNSLAANVPKAIVLSQVEKAKEDMLNQLYSSVSGQSTAKIEELLLEDQ 808

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSA 120
           NVKRRR+R QKQS LLSKLTRQLSIHDNRAAAA+NWS+  G AESSPR+S   GDDWRSA
Sbjct: 809 NVKRRRERIQKQSSLLSKLTRQLSIHDNRAAAATNWSN--GSAESSPRSSGGLGDDWRSA 866

Query: 121 FDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDV--RSGSNSGSRRTPNRVPPPPPPTQ 178
           FDAAAN PVS    SRS SNGHSR YSDPA+NGDV   S SNSGSRRTPNR+PP PP + 
Sbjct: 867 FDAAANSPVSRSGSSRSGSNGHSRHYSDPAQNGDVNSSSNSNSGSRRTPNRLPPAPPGS- 925

Query: 179 SGSKY 183
           SG KY
Sbjct: 926 SGYKY 930

Source: Astragalus sinicus

Species: Astragalus sinicus

Genus: Astragalus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357470181|ref|XP_003605375.1| Dynamin-2B [Medicago truncatula] gi|355506430|gb|AES87572.1| Dynamin-2B [Medicago truncatula]

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/183 (80%), Positives = 158/183 (86%), Gaps = 5/183 (2%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSLA NV KAVVLCQVEKAKEDMLNQLYSSV  QSTA+IEELL EDQ
Sbjct: 745 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSVSGQSTAKIEELLLEDQ 804

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSA 120
           NVKRRR+RYQKQS LLSKLTRQLSIHDNRAAAASNWS+  G AESSPR+S   GDDWR+A
Sbjct: 805 NVKRRRERYQKQSSLLSKLTRQLSIHDNRAAAASNWSN--GSAESSPRSSGP-GDDWRTA 861

Query: 121 FDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSG 180
           FDAA+NG VS RS SRS SNGHSR  SDPA+NGD+ SG NSGSRRTPNR+PP PP + SG
Sbjct: 862 FDAASNGSVS-RSGSRSGSNGHSRHNSDPAQNGDLNSGPNSGSRRTPNRLPPAPPGS-SG 919

Query: 181 SKY 183
            KY
Sbjct: 920 YKY 922

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51477379|gb|AAU04752.1| DRP [Cucumis melo]

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 139/184 (75%), Positives = 154/184 (83%), Gaps = 10/184 (5%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSLA NV KAVVLCQVEKAKEDMLNQLYSS+ AQS+A+IEELLQEDQ
Sbjct: 748 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAQSSAKIEELLQEDQ 807

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSA 120
           NVKRRR+RYQKQS LLSKLTRQLSIHDNR AAA+ WSD   G+ESSP+TS + GD+WRSA
Sbjct: 808 NVKRRRERYQKQSSLLSKLTRQLSIHDNR-AAATGWSD--SGSESSPKTSGSPGDEWRSA 864

Query: 121 FDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSG 180
           FDAAANG      Y RS+SNGH    SD  +NGD+ SGSNS SRRTPNR+PP PP + SG
Sbjct: 865 FDAAANGRA---DYRRSSSNGH----SDATQNGDINSGSNSSSRRTPNRLPPAPPQSSSG 917

Query: 181 SKYF 184
           S+YF
Sbjct: 918 SRYF 921

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129484|ref|XP_002328728.1| predicted protein [Populus trichocarpa] gi|222839026|gb|EEE77377.1| predicted protein [Populus trichocarpa]

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 136/173 (78%), Positives = 145/173 (83%), Gaps = 10/173 (5%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSL  NV KAVVLCQVEKAKEDMLNQLYSS+ AQSTARIEELLQEDQ
Sbjct: 737 MSQEVRGYVEAVLNSLGANVPKAVVLCQVEKAKEDMLNQLYSSISAQSTARIEELLQEDQ 796

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSD-GGGGAESSPRTSA-ASGDDWR 118
           N KRRR+RYQKQS LLS LTR+LSIHDNRAAAASNWSD GGGGAESSPRT+  +SG+DWR
Sbjct: 797 NAKRRRERYQKQSSLLSNLTRKLSIHDNRAAAASNWSDGGGGGAESSPRTNGPSSGEDWR 856

Query: 119 SAFDAAANGPV-SLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRV 170
           +AFDAAANGP  S    SRS    HSRR SDPA+NGDV S S   SRRTP R+
Sbjct: 857 NAFDAAANGPADSFGGPSRS----HSRRNSDPAQNGDVNSNS---SRRTPTRM 902

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120026|ref|XP_002331118.1| predicted protein [Populus trichocarpa] gi|222872846|gb|EEF09977.1| predicted protein [Populus trichocarpa]

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 132/171 (77%), Positives = 144/171 (84%), Gaps = 12/171 (7%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSL  NV KAVVLCQVEKAKEDMLNQLYSS+  QSTARIEELLQEDQ
Sbjct: 745 MSQEVRGYVEAVLNSLGANVPKAVVLCQVEKAKEDMLNQLYSSISTQSTARIEELLQEDQ 804

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAA-SGDDWRS 119
           NVKR+R+RYQKQS LLSKLTRQLSIHDNRAAAAS+WSD G GAESSPRT+ + SG+DWR+
Sbjct: 805 NVKRKRERYQKQSSLLSKLTRQLSIHDNRAAAASSWSD-GSGAESSPRTNGSLSGEDWRN 863

Query: 120 AFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRV 170
           AFD+AANGPV         S  HSRR SDPA+NGDV   S +GSRRTPNR+
Sbjct: 864 AFDSAANGPV-------GPSRSHSRRNSDPAQNGDV---SANGSRRTPNRM 904

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447543|ref|XP_004141527.1| PREDICTED: dynamin-2B-like [Cucumis sativus] gi|449481470|ref|XP_004156193.1| PREDICTED: dynamin-2B-like [Cucumis sativus]

 Score =  249 bits (635), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/184 (77%), Positives = 156/184 (84%), Gaps = 6/184 (3%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           MSQEVRGY EAVLNSLA NV KAVVLCQVEKAKEDMLNQLYSS+ AQS+A+IEELLQEDQ
Sbjct: 751 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAQSSAKIEELLQEDQ 810

Query: 61  NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSAASGDDWRSA 120
           NVKRRR+RYQKQS LLSKLTRQLSIHDNRAAAA  WSD   GAESSP+TS + GD+WRSA
Sbjct: 811 NVKRRRERYQKQSSLLSKLTRQLSIHDNRAAAA-GWSD--SGAESSPKTSGSPGDEWRSA 867

Query: 121 FDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRTPNRVPPPPPPTQSG 180
           FDAAANG      Y RS+SNGHS   SDP +NGD+ SGSNS SRRTPNR+PP PP + SG
Sbjct: 868 FDAAANGRA---DYRRSSSNGHSGHSSDPTQNGDINSGSNSSSRRTPNRLPPAPPQSSSG 924

Query: 181 SKYF 184
           S+YF
Sbjct: 925 SRYF 928

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
TAIR|locus:2202847	920	DL3 "dynamin-like 3" [Arabidop	0.961	0.192	0.718	1.2e-60
TAIR|locus:2012763	914	ADL6 "dynamin-like protein 6"	0.978	0.196	0.702	7.3e-59
TAIR|locus:2006777	614	DL1C "DYNAMIN-like 1C" [Arabid	0.407	0.122	0.346	6.4e-06
TAIR|locus:2042371	612	DL1D "DYNAMIN-like 1D" [Arabid	0.423	0.127	0.333	3.9e-05
TAIR|locus:2165805	610	DL1 "dynamin-like protein" [Ar	0.407	0.122	0.306	7.6e-05
TAIR|locus:2076780	610	DL1B "DYNAMIN-like 1B" [Arabid	0.407	0.122	0.306	0.0001
UNIPROTKB|Q39821	610	Q39821 "Dynamin-related protei	0.385	0.116	0.309	0.00036
TAIR|locus:2101482	624	DL1E "DYNAMIN-like 1E" [Arabid	0.423	0.125	0.333	0.00037

TAIR|locus:2202847 DL3 "dynamin-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 624 (224.7 bits), Expect = 1.2e-60, P = 1.2e-60
 Identities = 133/185 (71%), Positives = 147/185 (79%)

Query:     1 MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
             MSQEVRGY EAVLNSLA NV KAVVLCQVEK+KEDMLNQLYSS+ A    RIE L+QEDQ
Sbjct:   740 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIESLIQEDQ 799

Query:    61 NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRS 119
             NVKRRRDRYQKQS LLSKLTRQLSIHDNRAAAAS+WSD  G  ESSPRT+  +SG+DW +
Sbjct:   800 NVKRRRDRYQKQSSLLSKLTRQLSIHDNRAAAASSWSDNSG-TESSPRTNGGSSGEDWMN 858

Query:   120 AFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRSGSNSGSRRT-PNRVXXXXXXTQ 178
             AF+AAA+GP SL+ Y    S GHSRRYSDPA+NG+  SGS   SRRT PNR+       Q
Sbjct:   859 AFNAAASGPDSLKRYG---SGGHSRRYSDPAQNGEDSSGSGGSSRRTTPNRLPPAP--PQ 913

Query:   179 SGSKY 183
             SGS Y
Sbjct:   914 SGSSY 918

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009504 "cell plate" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030276 "clathrin binding" evidence=IDA

GO:0045334 "clathrin-coated endocytic vesicle" evidence=IDA

GO:0072583 "clathrin-mediated endocytosis" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2012763 ADL6 "dynamin-like protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 608 (219.1 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 130/185 (70%), Positives = 143/185 (77%)

Query:     1 MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
             MSQEVRGY EAVLNSLA NV KAVVLCQVEKAKEDMLNQLYSS+ A    RIE L+QEDQ
Sbjct:   733 MSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQ 792

Query:    61 NVKRRRDRYQKQSELLSKLTRQLSIHDNRAAAASNWSDGGGGAESSPRTSA-ASGDDWRS 119
             NVKRRR+RYQKQS LLSKLTRQLSIHDNRAAAAS++SD  G  ESSPR S  +SGDDW +
Sbjct:   793 NVKRRRERYQKQSSLLSKLTRQLSIHDNRAAAASSYSDNSG-TESSPRASGGSSGDDWMN 851

Query:   120 AFDAAANGPVSLRSYSRSASNGHSRRYSDPAENGDVRS-GSNSGSRRTPNRVXXXXXXTQ 178
             AF++AANGP    S S+  S GHSRRYSDPA+NGD  S GS S  R TPNR+      T 
Sbjct:   852 AFNSAANGPSD--SLSKYGSGGHSRRYSDPAQNGDAASPGSGSNRRTTPNRLPPAPPPTG 909

Query:   179 SGSKY 183
             S  +Y
Sbjct:   910 SAYRY 914

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006896 "Golgi to vacuole transport" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2006777 DL1C "DYNAMIN-like 1C" [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 26/75 (34%), Positives = 40/75 (53%)

Query:     1 MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
             +   V  Y   V ++L  ++ KAVV CQV +AK  +LN  Y+ VG +   ++  +L ED 
Sbjct:   526 IGSNVSAYINMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDP 585

Query:    61 NVKRRRDRYQKQSEL 75
              +  RR    K+ EL
Sbjct:   586 QLMERRGTLAKRLEL 600

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009504 "cell plate" evidence=IDA

GO:0010152 "pollen maturation" evidence=IMP

GO:0000266 "mitochondrial fission" evidence=IMP

GO:0007005 "mitochondrion organization" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005938 "cell cortex" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0042732 "D-xylose metabolic process" evidence=RCA

TAIR|locus:2042371 DL1D "DYNAMIN-like 1D" [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:     1 MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
             ++  V  Y + V  +L   + KAVV CQV +AK  +LN  Y+ +      R+ +LL E+ 
Sbjct:   523 IASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENP 582

Query:    61 NVKRRRDRYQKQSELLSK 78
              +  RR +  K+ EL  K
Sbjct:   583 ALMERRMQCAKRLELYKK 600

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2165805 DL1 "dynamin-like protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 7.6e-05, P = 7.6e-05
 Identities = 23/75 (30%), Positives = 37/75 (49%)

Query:     1 MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
             +   V  Y   V   L  ++ K++V CQV +AK  +L+  ++ +G     R+  LL ED 
Sbjct:   521 IGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLNEDP 580

Query:    61 NVKRRRDRYQKQSEL 75
              +  RR    K+ EL
Sbjct:   581 AIMERRSAISKRLEL 595

GO:0003924 "GTPase activity" evidence=IEA;IDA

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0000911 "cytokinesis by cell plate formation" evidence=IGI

GO:0009504 "cell plate" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IGI

GO:0009920 "cell plate formation involved in plant-type cell wall biogenesis" evidence=IGI

GO:0010091 "trichome branching" evidence=IMP

GO:0005773 "vacuole" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005874 "microtubule" evidence=IDA

GO:0010051 "xylem and phloem pattern formation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0030276 "clathrin binding" evidence=IDA

GO:0072583 "clathrin-mediated endocytosis" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

TAIR|locus:2076780 DL1B "DYNAMIN-like 1B" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
 Identities = 23/75 (30%), Positives = 42/75 (56%)

Query:     1 MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
             +   V  Y   V   L  ++ K++V CQV +AK  +L+  ++ +G +  +++ +LL ED 
Sbjct:   521 IGSNVLSYVNMVCAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDP 580

Query:    61 NVKRRRDRYQKQSEL 75
              V++RR    K+ EL
Sbjct:   581 AVQQRRTSIAKRLEL 595

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

UNIPROTKB|Q39821 Q39821 "Dynamin-related protein 12A" [Glycine max (taxid:3847)]

 Score = 112 (44.5 bits), Expect = 0.00036, P = 0.00036
 Identities = 22/71 (30%), Positives = 37/71 (52%)

Query:     5 VRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKR 64
             +  Y   V  +L  ++ K++V CQV +AK  +L+  ++ +G     R+  LL ED  +  
Sbjct:   525 ILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMEIKRLSSLLNEDPAIME 584

Query:    65 RRDRYQKQSEL 75
             RR    K+ EL
Sbjct:   585 RRSALAKRLEL 595

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2101482 DL1E "DYNAMIN-like 1E" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 0.00037, P = 0.00037
 Identities = 26/78 (33%), Positives = 40/78 (51%)

Query:     1 MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
             ++  V  Y   V ++L   + KA V CQV +AK  +LN  YS +  +   ++ +LL ED 
Sbjct:   535 IASNVSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLLDEDP 594

Query:    61 NVKRRRDRYQKQSELLSK 78
              +  RR    K+ EL  K
Sbjct:   595 ALMDRRLECAKRLELYKK 612


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.308   0.121   0.331    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      184       178   0.00086  109 3  11 23  0.38    33
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  588 (63 KB)
  Total size of DFA:  145 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.64u 0.10s 21.74t   Elapsed:  00:00:02
  Total cpu time:  21.64u 0.10s 21.74t   Elapsed:  00:00:03
  Start:  Fri May 10 05:27:59 2013   End:  Fri May 10 05:28:02 2013

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LQ55	DRP2B_ARATH	3, ., 6, ., 5, ., 5	0.7405	0.9619	0.1923	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032031001 SubName- Full=Chromosome chr18 scaffold_61, whole genome shotgun sequence; (926 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	184
pfam02212	90	pfam02212, GED, Dynamin GTPase effector domain	1e-11
smart00302	92	smart00302, GED, Dynamin GTPase effector domain	2e-07

>gnl|CDD|202159 pfam02212, GED, Dynamin GTPase effector domain

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 8  YFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRD 67
          YF  V   +A  + KA++   V ++KE +  +L   +       ++ELL+ED  + ++R 
Sbjct: 14 YFNIVRKRIADQIPKAIMYFLVNESKESLQKELLQLL--YKKEDLDELLKEDPEIAQKRK 71

Query: 68 RYQKQSELLSK 78
            +K+ E L K
Sbjct: 72 ELKKRLERLKK 82

Length = 90

>gnl|CDD|128597 smart00302, GED, Dynamin GTPase effector domain

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 1  MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
          +   V+ YF  V  +LA  V KA++   V ++K+ + N+L +         ++ELL+ED 
Sbjct: 9  IKSLVKSYFTIVSKTLADQVPKAIMYLLVNESKDSLQNELLA--LLYKEELLDELLEEDP 66

Query: 61 NVKRRRDRYQKQSELLSK 78
           +  +R   +K+ ELL K
Sbjct: 67 EIASKRKELKKRLELLKK 84

Length = 92

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	184
smart00302	92	GED Dynamin GTPase effector domain.	99.96
PF02212	92	GED: Dynamin GTPase effector domain; InterPro: IPR	99.91
KOG0446	657	consensus Vacuolar sorting protein VPS1, dynamin,	99.75
COG0699	546	Predicted GTPases (dynamin-related) [General funct	94.19

>smart00302 GED Dynamin GTPase effector domain

Probab=99.96  E-value=4.4e-29  Score=185.44  Aligned_cols=83  Identities=29%  Similarity=0.486  Sum_probs=79.4

Q ss_pred             CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 030018            1 MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLT   80 (184)
Q Consensus         1 ~~~~V~SYf~IVrk~I~D~VPKAIMh~LVn~sKe~Lq~~L~s~LY~~e~~~l~eLL~Edp~I~~RRe~c~k~L~~LkkA~   80 (184)
                      |.++|.+||+||+++|+|+||||||||||+++++.||++||..||+.+  .+++||+|||+|++||++|++++++|++|.
T Consensus         9 i~~lv~sYf~iv~k~i~D~VPKaI~~~lv~~~~~~lq~~L~~~L~~~~--~~~~LL~E~~~i~~kR~~~~~~l~~L~~A~   86 (92)
T smart00302        9 IKSLVKSYFTIVSKTLADQVPKAIMYLLVNESKDSLQNELLALLYKEE--LLDELLEEDPEIASKRKELKKRLELLKKAR   86 (92)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCcc--cHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999999975  699999999999999999999999999999


Q ss_pred             HHHhh
Q 030018           81 RQLSI   85 (184)
Q Consensus        81 ~~Lsi   85 (184)
                      +.|+.
T Consensus        87 ~~l~~   91 (92)
T smart00302       87 QIIAA   91 (92)
T ss_pred             HHHhc
Confidence            99965

>PF02212 GED: Dynamin GTPase effector domain; InterPro: IPR003130 Dynamin GTPase effector domain found in proteins related to dynamin

Probab=99.91  E-value=1.7e-24  Score=159.70  Aligned_cols=83  Identities=31%  Similarity=0.452  Sum_probs=76.5

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Q 030018            2 SQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR   81 (184)
Q Consensus         2 ~~~V~SYf~IVrk~I~D~VPKAIMh~LVn~sKe~Lq~~L~s~LY~~e~~~l~eLL~Edp~I~~RRe~c~k~L~~LkkA~~   81 (184)
                      ...|.+||+||+++|+|+|||+|+||||+++++.|+.+|+.+||..+  .+++||+|||+|+++|++|+++++.|++|.+
T Consensus        10 ~~~l~aY~~ia~kr~~D~Vpk~I~~~lv~~~~~~L~~~l~~~l~~~~--~~~~Ll~Ed~~i~~kR~~l~~~~~~L~~A~~   87 (92)
T PF02212_consen   10 KALLRAYFEIARKRFIDSVPKAIMHFLVNKSKEQLQSELLNELYDEE--DLEELLQEDPEIAEKREELKKKLERLKKAQQ   87 (92)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCG--GCCCCT--GHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHhccchH--HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999986  4899999999999999999999999999999


Q ss_pred             HHhhh
Q 030018           82 QLSIH   86 (184)
Q Consensus        82 ~Lsi~   86 (184)
                      .|+.+
T Consensus        88 ~L~~~   92 (92)
T PF02212_consen   88 ILSEV   92 (92)
T ss_dssp             HHHC-
T ss_pred             HHHcC
Confidence            99753

Dynamin is a GTP-hydrolysing protein that is an essential participant in clathrin-mediated endocytosis by cells. It self-assembles into 'collars' in vivo at the necks of invaginated coated pits; the self-assembly of dynamin being coordinated by the GTPase domain. Mutation studies indicate that dynamin functions as a molecular regulator of receptor-mediated endocytosis [].; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 3ZYS_B 3SZR_A 3LJB_B 3T35_C 3T34_A 2X2F_D 2X2E_D 3SNH_A 3ZYC_D 3ZVR_A.

>KOG0446 consensus Vacuolar sorting protein VPS1, dynamin, and related proteins [Intracellular trafficking, secretion, and vesicular transport; General function prediction only]

Probab=99.75  E-value=5.3e-18  Score=162.68  Aligned_cols=83  Identities=31%  Similarity=0.381  Sum_probs=76.9

Q ss_pred             CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Q 030018            1 MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLT   80 (184)
Q Consensus         1 ~~~~V~SYf~IVrk~I~D~VPKAIMh~LVn~sKe~Lq~~L~s~LY~~e~~~l~eLL~Edp~I~~RRe~c~k~L~~LkkA~   80 (184)
                      |.+.+.+||+||+++|+|+|||+|||||||.+|+.||++|+..||+. .+.++.||+|+|.|++||++|++|+.+|++|.
T Consensus       569 i~~~~~sY~~iv~~~i~d~vpk~i~~~lv~~~k~~l~~~l~~~L~~~-~~~~~~ll~E~~~i~~~R~~~~~~l~~L~~a~  647 (657)
T KOG0446|consen  569 ISSCPESYLNIVSDKLVDTVPKALNHELLNEFKDDLPNELDQRLYAG-DEQLESLLKEDPRIKRRRELQQKRLLALQKAL  647 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-hhHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999992 45899999999999999999999988888887


Q ss_pred             HHHh
Q 030018           81 RQLS   84 (184)
Q Consensus        81 ~~Ls   84 (184)
                      ..+.
T Consensus       648 ~ii~  651 (657)
T KOG0446|consen  648 SILA  651 (657)
T ss_pred             HHHH
Confidence            7764

>COG0699 Predicted GTPases (dynamin-related) [General function prediction only]

Probab=94.19  E-value=0.58  Score=42.17  Aligned_cols=76  Identities=17%  Similarity=0.097  Sum_probs=65.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Q 030018            3 QEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR   81 (184)
Q Consensus         3 ~~V~SYf~IVrk~I~D~VPKAIMh~LVn~sKe~Lq~~L~s~LY~~e~~~l~eLL~Edp~I~~RRe~c~k~L~~LkkA~~   81 (184)
                      +.+.+| .++...+.+.|++++++.+.+..+..........++...  ..++|..+.+.+.+.+..|.+.++.+..+..
T Consensus       467 ~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  542 (546)
T COG0699         467 SLLESL-LILAQKIRDSVLKAIFELLKNKRKRLAQKQRLKRLYLEQ--LEDELLRTAEEILELRLLLEQFLEALKLAAR  542 (546)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            578899 999999999999999999988888877777766666664  5788899999999999999999988888765

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	184
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	1e-14
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	5e-08
3ljb_A	271	Interferon-induced GTP-binding protein MX1; four-h	3e-05

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A Length = 772

 Score = 70.3 bits (171), Expect = 1e-14
 Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           +   V  Y   V  ++   + K ++   +   KE + ++L +++   S      L++E  
Sbjct: 682 IRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLY--SCGDQNTLMEESA 739

Query: 61  NVKRRRDRYQKQSELLSK 78
              +RRD   +    L +
Sbjct: 740 EQAQRRDEMLRMYHALKE 757

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B Length = 608

 Score = 50.8 bits (121), Expect = 5e-08
 Identities = 8/78 (10%), Positives = 31/78 (39%), Gaps = 2/78 (2%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           + Q +  Y +     +++++   +    ++   + +   +   +  Q       LL+E  
Sbjct: 523 IFQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQKAMLQLL--QDKDTYSWLLKERS 580

Query: 61  NVKRRRDRYQKQSELLSK 78
           +   +R   +++   L++
Sbjct: 581 DTSDKRKFLKERLARLTQ 598

>3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens} Length = 271

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 6/60 (10%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 1   MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQ 60
           + Q +  Y +     +++++   +    ++   + +   +   +  Q       LL+E  
Sbjct: 212 IFQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQKAMLQLL--QDKDTYSWLLKERS 269

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	184
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	99.86
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	99.84
3ljb_A	271	Interferon-induced GTP-binding protein MX1; four-h	99.43
3t34_A	360	Dynamin-related protein 1A, linker, dynamin-relat	85.02

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A

Probab=99.86  E-value=4.1e-22  Score=191.96  Aligned_cols=82  Identities=20%  Similarity=0.286  Sum_probs=72.9

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHH
Q 030018            3 QEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTRQ   82 (184)
Q Consensus         3 ~~V~SYf~IVrk~I~D~VPKAIMh~LVn~sKe~Lq~~L~s~LY~~e~~~l~eLL~Edp~I~~RRe~c~k~L~~LkkA~~~   82 (184)
                      .+|+|||+||+|+|.|+|||||||||||++|+.|+.+|+.+||+.+  ++++||+|++++++||++|++|+.+|++|   
T Consensus       684 ~l~~sy~~iv~k~~~d~~pk~im~~~vn~~k~~~~~el~~~ly~~~--~~~~lm~Es~~~~~~r~~~~~~~~~l~~a---  758 (772)
T 3zvr_A          684 NLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSELLANLYSCG--DQNTLMEESAEQAQRRDEMLRMYHALKEA---  758 (772)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHHHTC--CTTTTTCCCHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CHHHHHhcCHHHHHHHHHHHHHHHHHHHH---
Confidence            4799999999999999999999999999999999999999999996  69999999999999999997777666666   


Q ss_pred             Hhhhhhh
Q 030018           83 LSIHDNR   89 (184)
Q Consensus        83 Lsi~~~~   89 (184)
                      |.+++++
T Consensus       759 ~~ii~~i  765 (772)
T 3zvr_A          759 LSIIGDI  765 (772)
T ss_dssp             HHHHC--
T ss_pred             HHHHHhc
Confidence            5556666

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B

Probab=99.84  E-value=3.5e-21  Score=178.54  Aligned_cols=83  Identities=11%  Similarity=0.225  Sum_probs=79.6

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Q 030018            2 SQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNVKRRRDRYQKQSELLSKLTR   81 (184)
Q Consensus         2 ~~~V~SYf~IVrk~I~D~VPKAIMh~LVn~sKe~Lq~~L~s~LY~~e~~~l~eLL~Edp~I~~RRe~c~k~L~~LkkA~~   81 (184)
                      ..+|.|||+||+|+|+|+|||+||||||+++++.||.+|++.||+.+  .+++||+|||+|++||++|++++++|++|.+
T Consensus       524 ~~~l~sY~~iv~~~~~D~vP~~I~~~lv~~~~~~lq~~l~~~l~~~~--~~~~ll~E~~~~~~~R~~l~~~~~~L~~A~~  601 (608)
T 3szr_A          524 FQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQKAMLQLLQDKD--TYSWLLKERSDTSDKRKFLKERLARLTQARR  601 (608)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTTCHH--HHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcch--hHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999999999875  7999999999999999999999999999999


Q ss_pred             HHhhh
Q 030018           82 QLSIH   86 (184)
Q Consensus        82 ~Lsi~   86 (184)
                      .|..|
T Consensus       602 ~l~~~  606 (608)
T 3szr_A          602 RLAQF  606 (608)
T ss_dssp             HHHTC
T ss_pred             HHHhc
Confidence            99876

>3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens}

Probab=99.43  E-value=9.7e-14  Score=120.00  Aligned_cols=60  Identities=8%  Similarity=0.217  Sum_probs=54.4

Q ss_pred             CchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhHHHHhhcCHHH
Q 030018            1 MSQEVRGYFEAVLNSLATNVSKAVVLCQVEKAKEDMLNQLYSSVGAQSTARIEELLQEDQNV   62 (184)
Q Consensus         1 ~~~~V~SYf~IVrk~I~D~VPKAIMh~LVn~sKe~Lq~~L~s~LY~~e~~~l~eLL~Edp~I   62 (184)
                      |.++|.+||+||+++|+|+|||+|+++||+.+++.||.+|+..||..+  .++.||+||+++
T Consensus       212 i~~~l~sYf~i~~~rl~d~IP~~I~~~ll~~~~~~lQ~~ml~~l~~~~--~~~~LL~E~~d~  271 (271)
T 3ljb_A          212 IFQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQKAMLQLLQDKD--TYSWLLKERSDT  271 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTSCGG--GHHHHTCCC---
T ss_pred             HHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHhchh--hHHHHhcCCCCC
Confidence            456899999999999999999999999999999999999999999986  799999999975

>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*

Probab=85.02  E-value=0.33  Score=41.12  Aligned_cols=23  Identities=26%  Similarity=0.339  Sum_probs=17.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHH
Q 030018           59 DQNVKRRRDRYQKQSELLSKLTR   81 (184)
Q Consensus        59 dp~I~~RRe~c~k~L~~LkkA~~   81 (184)
                      ||++++||+.|.++|++|+.|..
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~  355 (360)
T 3t34_A          333 DPAIMERRSAISKRLELYRAAQS  355 (360)
T ss_dssp             ----CCCTTHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999998864

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00