Citrus Sinensis ID: 030039

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
Protein Sequence
MSSIKPDEFSSLPQTTTTGILMLNYRYQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKETRGVAMTQMAPITPMAPLPPVIEESMSREF
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEcccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccHHHHHHHHHHHccccccccccHHHHccHHHHHHHHHHHHHHccccccccccccHHHHHccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccEEHccEEEEEcccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccEEEEccHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mssikpdefsslpqttttGILMLNYRYQnrvknknswssglcdcfsdyknccitcwcpcmtfgQIAEIVdkgssscgvngaLCALMccvtccpccytcfyrskmrkqytlkkkpccdclvhccclhcaLCQEHRELRnrgfdmntgwhgnveketrgvamtqmapitpmaplppvieesmsref
Flexible Loop (DISEMBL)
mssikpdefsslpqttttGILMLNYRYQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRgfdmntgwhgnvEKETRGVAMTQmapitpmaplppvIEESMSREF
Low Complexity Region (SEG)
MSSIKPDEFSSLPQTTTTGILMLNYRYQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGalcalmccvtccpccytcFYRSKMRKQYTLKKKPccdclvhccclhcalcQEHRELRNRGFDMNTGWHGNVEKETRGVAMTQMAPITPMAPLPPVIEESMSREF
Disordered region (IsUnstruct)
****************TTGILMLNYRYQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNV*********************************
Disordered Region (DISOPRED)
****************************************LCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTG**************************************
Disordered Region (DISEMBL)
***********LPQTTTTGILMLNYRYQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKETRGVAMTQMAPITPMAPLPPVIEESMSREF
Disordered Region (DISPRO)
************************************WSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKETR****************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSIKPDEFSSLPQTTTTGILMLNYRYQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKETRGVAMTQMAPITPMAPLPPVIEESMSREF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	184	2.2.26 [Sep-21-2011]
Q9LQU4	152	Protein PLANT CADMIUM RES	yes	no	0.75	0.907	0.556	1e-42
P0CW97	152	Protein PLANT CADMIUM RES	no	no	0.815	0.986	0.496	1e-39
Q9M9A5	224	Protein PLANT CADMIUM RES	no	no	0.711	0.584	0.511	1e-36
Q9LQU2	151	Protein PLANT CADMIUM RES	no	no	0.75	0.913	0.516	4e-36
D9HP26	157	Cell number regulator 10	N/A	no	0.641	0.751	0.576	7e-35
B6TYV8	181	Cell number regulator 2 O	N/A	no	0.733	0.745	0.561	4e-34
D9HP19	167	Cell number regulator 3 O	N/A	no	0.820	0.904	0.454	5e-34
B6TZ45	191	Cell number regulator 1 O	N/A	no	0.652	0.628	0.541	5e-34
Q9SX24	160	Protein PLANT CADMIUM RES	no	no	0.782	0.9	0.526	5e-33
Q9LS44	184	Protein PLANT CADMIUM RES	no	no	0.663	0.663	0.487	3e-32

>sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1

 Score =  172 bits (436), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 84/151 (55%), Positives = 104/151 (68%), Gaps = 13/151 (8%)

Query: 34  KNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCP 93
           +  WS+G CDCFSD KNCCIT WCPC+TFGQ+AEIVD+GS+SCG  GAL AL+  VT C 
Sbjct: 13  EGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCA 72

Query: 94  CCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEK 153
           C Y+CFYR KMR QY +K   C DCL H CC  C+L Q++REL++RG+DM+ GW GNVE+
Sbjct: 73  CIYSCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVER 132

Query: 154 ETR--GVAMTQMAPITPMAPLPPVIEESMSR 182
           +    GVAM             PV +  M+R
Sbjct: 133 QQNQGGVAMG-----------APVFQGGMTR 152

Zinc transporter acting in both zinc extrusion and long-distance zinc transport. Involved in the loading of zinc into the xyleme and in the detoxification of excess zinc at the epidermal cells. Acts independently from the zinc transporters HMA2 and HMA4. May be also involved in cadmium resistance.
Arabidopsis thaliana (taxid: 3702)

>sp|P0CW97|PCR3_ARATH Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis thaliana GN=PCR3 PE=3 SV=1

 Score =  162 bits (411), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/163 (49%), Positives = 103/163 (63%), Gaps = 13/163 (7%)

Query: 22  MLNYRYQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGA 81
           M +   Q     +  WS+G CDCFSD +NCCIT  CPC+TFGQ+A+IVD+G++SCG  GA
Sbjct: 1   MASQHLQANPHAEGEWSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRGNTSCGTAGA 60

Query: 82  LCALMCCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGF 141
           L  L+  +T C C Y+C YR K+R QY ++   C DCL H CC  CAL QE+REL++RGF
Sbjct: 61  LYVLLAAITGCGCLYSCIYRGKIRAQYNIRGDGCTDCLKHFCCELCALTQEYRELKHRGF 120

Query: 142 DMNTGWHGNVEKETR--GVAMTQMAPITPMAPLPPVIEESMSR 182
           DM+ GW GNVEK+    GVAM             P  +  MSR
Sbjct: 121 DMSLGWAGNVEKQQNQGGVAMG-----------APAFQGGMSR 152

May be involved in heavy metals transport.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M9A5|PCR6_ARATH Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana GN=PCR6 PE=2 SV=1

 Score =  152 bits (383), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 67/131 (51%), Positives = 91/131 (69%)

Query: 35  NSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPC 94
           ++W+SGL DC +D +N  ITC  P +TFGQIAE++D+G++SCG  G L  L+CC+   PC
Sbjct: 86  SNWTSGLFDCMNDGENALITCCFPFVTFGQIAEVIDEGATSCGTAGMLYGLICCLFAIPC 145

Query: 95  CYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKE 154
            YTC +R+K+R +Y L   P  D + HC C +CALCQE+REL+NRG D + GW GNV+K+
Sbjct: 146 VYTCTFRTKLRSKYGLPDAPAPDWITHCFCEYCALCQEYRELKNRGLDPSIGWIGNVQKQ 205

Query: 155 TRGVAMTQMAP 165
             G     MAP
Sbjct: 206 RMGQQQEMMAP 216

May be involved in heavy metals transport.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQU2|PCR1_ARATH Protein PLANT CADMIUM RESISTANCE 1 OS=Arabidopsis thaliana GN=PCR1 PE=1 SV=1

 Score =  150 bits (380), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 78/151 (51%), Positives = 95/151 (62%), Gaps = 13/151 (8%)

Query: 34  KNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCP 93
           +  WS+G CDCFSD +NCCIT  CPC+TFGQ+AEIVD+GS SC   GAL  L+  +T C 
Sbjct: 12  QGEWSTGFCDCFSDCRNCCITLCCPCITFGQVAEIVDRGSKSCCAAGALYMLIDLITSCG 71

Query: 94  CCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEK 153
             Y CFY  KMR QY +K   C DCL H CC  CAL Q++REL++RGFDM+ GW GN EK
Sbjct: 72  RMYACFYSGKMRAQYNIKGDGCTDCLKHFCCNLCALTQQYRELKHRGFDMSLGWAGNAEK 131

Query: 154 ETR--GVAMTQMAPITPMAPLPPVIEESMSR 182
           +    GVAM             P  +  M+R
Sbjct: 132 QQNQGGVAMG-----------APAFQGGMTR 151

Involved in glutathione-independent cadmium resistance. Reduces cadmium uptake rather than activating efflux, but is not closely coupled to calcium transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|D9HP26|CNR10_MAIZE Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1

 Score =  146 bits (369), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 85/118 (72%)

Query: 34  KNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCP 93
            + WSSGL DCF D   CC+TCWCPC+TFG++AEIVD+G++SCG  GAL A++   T C 
Sbjct: 28  SSQWSSGLLDCFDDCGLCCLTCWCPCITFGRVAEIVDRGATSCGTAGALYAVLAYFTGCQ 87

Query: 94  CCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNV 151
             Y+C YR+KMR Q  L + PCCDCLVH CC  CALCQ+++EL+ RGFD   GW  N 
Sbjct: 88  WIYSCTYRAKMRAQLGLPETPCCDCLVHFCCEPCALCQQYKELKARGFDPVLGWDRNA 145

Zea mays (taxid: 4577)

>sp|B6TYV8|CNR2_MAIZE Cell number regulator 2 OS=Zea mays GN=CNR2 PE=2 SV=1

 Score =  144 bits (362), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/146 (56%), Positives = 104/146 (71%), Gaps = 11/146 (7%)

Query: 37  WSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCY 96
           WS+GLC+CF D  NCC+TC CPC+TFGQ AEI+D+GS+SCG +GAL AL+  +T C C Y
Sbjct: 47  WSTGLCNCFDDCHNCCVTCVCPCITFGQTAEIIDRGSTSCGTSGALYALVMLLTGCQCVY 106

Query: 97  TCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKETR 156
           +CFYR+KMR QY L+  PC DC VHCCC  CALCQE+REL+ RGFDM+ GWH N+E++ R
Sbjct: 107 SCFYRAKMRAQYGLQVSPCSDCCVHCCCQCCALCQEYRELKKRGFDMSIGWHANMERQGR 166

Query: 157 GVAMTQMAPITPMAPLPPVIEESMSR 182
             A            +PP +   M+R
Sbjct: 167 AAAA-----------VPPHMHPGMTR 181

May act as a negative regulator of cell number.

Zea mays (taxid: 4577)

>sp|D9HP19|CNR3_MAIZE Cell number regulator 3 OS=Zea mays GN=CNR3 PE=2 SV=1

 Score =  144 bits (362), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 98/154 (63%), Gaps = 3/154 (1%)

Query: 10  SSLPQTTTTGILMLNYRYQNRVKNK-NSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEI 68
           ++ P  T +G+ +        V  +   WSS L DCF D+  CC+T WCPC+TFG+ AEI
Sbjct: 4   ATTPYETASGVGVAPVAGLFPVAGEAREWSSRLLDCFDDFDICCMTFWCPCITFGRTAEI 63

Query: 69  VDKGSSSCGVNGALCALMCCVTCCPC--CYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLH 126
           VD G +SCG + AL AL+  ++   C   ++C YR+++R Q+ L + PC D LVH CCLH
Sbjct: 64  VDHGMTSCGTSAALFALIQWLSGSQCTWAFSCTYRTRLRAQHGLPEAPCADFLVHLCCLH 123

Query: 127 CALCQEHRELRNRGFDMNTGWHGNVEKETRGVAM 160
           CALCQE+REL+ RG++   GW  N ++   GVAM
Sbjct: 124 CALCQEYRELKARGYEPVLGWEFNAQRAAAGVAM 157

Zea mays (taxid: 4577)

>sp|B6TZ45|CNR1_MAIZE Cell number regulator 1 OS=Zea mays GN=CNR1 PE=2 SV=1

 Score =  143 bits (361), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 84/120 (70%)

Query: 37  WSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCY 96
           WS+GL  C  D  NC ITC CPC+TFGQ+A+IVDKG+  C  +G +  L+C  T   C Y
Sbjct: 51  WSTGLFHCMDDPGNCLITCLCPCVTFGQVADIVDKGTCPCIASGLVYGLICASTGMGCLY 110

Query: 97  TCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKETR 156
           +C YRSK+R +Y L +  C D LVHCCC H ALCQE+REL+NRGFD+  GW  N++++ R
Sbjct: 111 SCLYRSKLRAEYDLDEGECPDILVHCCCEHLALCQEYRELKNRGFDLGIGWEANMDRQRR 170

Acts as a negative regulator of cell number.

Zea mays (taxid: 4577)

>sp|Q9SX24|PCR11_ARATH Protein PLANT CADMIUM RESISTANCE 11 OS=Arabidopsis thaliana GN=PCR11 PE=3 SV=1

 Score =  140 bits (353), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/150 (52%), Positives = 108/150 (72%), Gaps = 6/150 (4%)

Query: 28  QNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMC 87
           Q R+K K+ WS+ LC+C+ D  +CC+TCWCPC+ FG+IAE+VD+GS+SCGV+GA+  ++ 
Sbjct: 11  QGRIKAKD-WSTDLCECWMDINSCCLTCWCPCVAFGRIAEVVDRGSTSCGVSGAMYMIIF 69

Query: 88  CVT--CCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELR-NRGFDMN 144
            +T       Y+CFYR+K+R QY LK++PCCDC VH CC  CALCQE+R+L+ NR  D+ 
Sbjct: 70  MLTGYGGSSLYSCFYRTKLRAQYNLKERPCCDCCVHFCCEPCALCQEYRQLQHNRDLDLV 129

Query: 145 TGWHGNVEKETRGVAMTQMAP--ITPMAPL 172
            GWHGN+E+  R  A T  AP    PM+ L
Sbjct: 130 IGWHGNMERHARLAASTPSAPPLQAPMSRL 159

May be involved in heavy metals transport.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LS44|PCR4_ARATH Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana GN=PCR4 PE=3 SV=1

 Score =  137 bits (346), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 60/123 (48%), Positives = 81/123 (65%), Gaps = 1/123 (0%)

Query: 32  KNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTC 91
           + +N WSS L DC +D +N  ITC  PC+T GQIAEIVD+G++ C   G L  ++  +  
Sbjct: 49  QTQNLWSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDEGATPCATGGLLYGMIFFIGV 108

Query: 92  CPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNV 151
            P  Y+C +R+KMR +Y L   P  D + H  C HCALCQE+REL++RGFD N GW GNV
Sbjct: 109 -PFVYSCMFRAKMRNKYGLPDAPAPDWITHLFCEHCALCQEYRELKHRGFDPNIGWAGNV 167

Query: 152 EKE 154
           + +
Sbjct: 168 QAQ 170

May be involved in heavy metals transport.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
224111470	193	predicted protein [Populus trichocarpa]	0.940	0.896	0.570	4e-57
225424333	201	PREDICTED: protein PLANT CADMIUM RESISTA	0.815	0.746	0.685	3e-56
224099529	192	predicted protein [Populus trichocarpa]	0.929	0.890	0.575	2e-54
147856544	180	hypothetical protein VITISV_006802 [Viti	0.684	0.7	0.694	5e-48
351727533	186	uncharacterized protein LOC100306298 [Gl	0.755	0.747	0.632	7e-48
356511317	175	PREDICTED: protein PLANT CADMIUM RESISTA	0.755	0.794	0.624	3e-47
326833993	184	fw2.2 [Arachis stenosperma]	0.733	0.733	0.651	5e-46
255573712	191	conserved hypothetical protein [Ricinus	0.820	0.790	0.553	1e-45
388496620	187	unknown [Lotus japonicus]	0.744	0.732	0.602	5e-45
255573714	147	conserved hypothetical protein [Ricinus	0.771	0.965	0.571	9e-45

>gi|224111470|ref|XP_002315866.1| predicted protein [Populus trichocarpa] gi|222864906|gb|EEF02037.1| predicted protein [Populus trichocarpa]

 Score =  226 bits (575), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 109/191 (57%), Positives = 136/191 (71%), Gaps = 18/191 (9%)

Query: 1   MSSIKPDEFSSLPQTTTTGILMLNYRYQN---------RVKNKNSWSSGLCDCFSDYKNC 51
            S+ +P  FS    TT   +   +  Y           R K+K  WS+GLCDCF D++NC
Sbjct: 12  FSNSQPPVFSQDTSTTGIPVSTTSQFYSTDDSRSSIELRSKSKGPWSTGLCDCFDDWRNC 71

Query: 52  CITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYTLK 111
           C+T WCPC+TFGQIAEIVDKG+SSCGVNGAL AL+ CVTCCPCCY+CFYR+KMR+QY L+
Sbjct: 72  CVTFWCPCITFGQIAEIVDKGASSCGVNGALYALISCVTCCPCCYSCFYRAKMRQQYLLR 131

Query: 112 KKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKETRGVAMTQMAPITPMAP 171
           + PC DCLVHCCC +C+LCQE+REL++RG+D+  GWHGNVEK+ R V          MA 
Sbjct: 132 ETPCGDCLVHCCCEYCSLCQEYRELKSRGYDLAMGWHGNVEKKNRSVE---------MAS 182

Query: 172 LPPVIEESMSR 182
           +PP +EE MSR
Sbjct: 183 VPPTVEEGMSR 193

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424333|ref|XP_002284819.1| PREDICTED: protein PLANT CADMIUM RESISTANCE 2 [Vitis vinifera] gi|297737652|emb|CBI26853.3| unnamed protein product [Vitis vinifera]

 Score =  223 bits (567), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 107/156 (68%), Positives = 125/156 (80%), Gaps = 6/156 (3%)

Query: 28  QNRVKN-KNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALM 86
           Q +VK  +  WSSGLCDCFSD +NCCITCWCPC+TFGQIAEIVDKGSS+CGVNGAL  L+
Sbjct: 51  QPKVKAPRVPWSSGLCDCFSDPRNCCITCWCPCITFGQIAEIVDKGSSACGVNGALYTLI 110

Query: 87  CCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTG 146
            CVT C CCY+CFYR+KMR+QY LK  PC DCLVHCCC +C+LCQE+REL+NRGFDM  G
Sbjct: 111 ACVTGCACCYSCFYRAKMRQQYLLKPSPCGDCLVHCCCEYCSLCQEYRELKNRGFDMTIG 170

Query: 147 WHGNVEKETRGVAMTQMAPITPMAPLPPVIEESMSR 182
           WHGNVE++ RGV M+ M+  T      P +EE MSR
Sbjct: 171 WHGNVERQNRGVEMSSMSSQT-----APTMEEGMSR 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099529|ref|XP_002311520.1| predicted protein [Populus trichocarpa] gi|222851340|gb|EEE88887.1| predicted protein [Populus trichocarpa]

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 111/193 (57%), Positives = 136/193 (70%), Gaps = 22/193 (11%)

Query: 1   MSSIKPDEFSSLPQTTTTGILMLNYR-----------YQNRVKNKNSWSSGLCDCFSDYK 49
            S+ +P  FS    TTTTGI + +              + R KNK  WS+GLCDC  D++
Sbjct: 11  FSTSQPPAFSQ--DTTTTGIPVTSTSQFYSTDDSRSSIELRSKNKGPWSTGLCDCHDDWR 68

Query: 50  NCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYT 109
           NCCIT WCPC+TFGQIAEIVDKGSSSCGVNGAL AL+ CVTC PCCY+CFYR+KMR+QY 
Sbjct: 69  NCCITFWCPCVTFGQIAEIVDKGSSSCGVNGALYALISCVTCFPCCYSCFYRAKMRQQYL 128

Query: 110 LKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKETRGVAMTQMAPITPM 169
           L++ PC DCLVHC C  C+LCQE+REL++RG+D+  GWHGNVEK+ R          + M
Sbjct: 129 LRETPCGDCLVHCFCECCSLCQEYRELKSRGYDLAMGWHGNVEKKNRS---------SEM 179

Query: 170 APLPPVIEESMSR 182
           A +PPV+E  MSR
Sbjct: 180 ASVPPVVEGGMSR 192

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147856544|emb|CAN82486.1| hypothetical protein VITISV_006802 [Vitis vinifera]

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 91/131 (69%), Positives = 106/131 (80%), Gaps = 5/131 (3%)

Query: 52  CITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYTLK 111
           CITCWCPC+TFGQIAEIVDKGSS+CGVNGAL  L+ CVT C CCY+CFYR+KMR+QY LK
Sbjct: 55  CITCWCPCITFGQIAEIVDKGSSACGVNGALYTLIACVTGCACCYSCFYRAKMRQQYLLK 114

Query: 112 KKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKETRGVAMTQMAPITPMAP 171
             PC DCLVHCCC +C+LCQE+REL+NRGFDM  GWHGNVE++ RGV M+ M+  T    
Sbjct: 115 PSPCGDCLVHCCCEYCSLCQEYRELKNRGFDMTIGWHGNVERQNRGVEMSSMSSQT---- 170

Query: 172 LPPVIEESMSR 182
             P +EE MSR
Sbjct: 171 -APTMEEGMSR 180

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727533|ref|NP_001236652.1| uncharacterized protein LOC100306298 [Glycine max] gi|255628141|gb|ACU14415.1| unknown [Glycine max]

 Score =  195 bits (495), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 93/147 (63%), Positives = 112/147 (76%), Gaps = 8/147 (5%)

Query: 36  SWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCC 95
           +WS+GLCDCFS+  NCC+TCWCPC+TFG++AEIVDKGS+SCG +GAL  L+CCV  C C 
Sbjct: 48  NWSTGLCDCFSECGNCCMTCWCPCVTFGRVAEIVDKGSTSCGASGALYTLICCVIGCGCL 107

Query: 96  YTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKET 155
           Y+CFYR KMR+QY LK   C DCL+HC C  CALCQE+REL++RGFDM  GWHGNVE+ +
Sbjct: 108 YSCFYRPKMRRQYGLKGNGCSDCLIHCFCEPCALCQEYRELQHRGFDMIIGWHGNVEQRS 167

Query: 156 RGVAMTQMAPITPMAPLPPVIEESMSR 182
           RGVAMT        A   P +E  MSR
Sbjct: 168 RGVAMT--------ATTAPSVENGMSR 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511317|ref|XP_003524373.1| PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Glycine max]

 Score =  193 bits (490), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 111/141 (78%), Gaps = 2/141 (1%)

Query: 31  VKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVT 90
           ++ +  WS+GL DCFS++KNCCITCWCPC+TFG++AEIVD+GS+SCG +GAL  ++CC+ 
Sbjct: 33  LQAQVDWSTGLFDCFSNFKNCCITCWCPCITFGRVAEIVDQGSTSCGASGALYTMICCLI 92

Query: 91  CCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGN 150
            C   Y+CFYR+KMR+QY LK+ PC DCL HCCC  CALCQE+REL NRGFDM  GW GN
Sbjct: 93  GCGWIYSCFYRTKMRRQYMLKESPCWDCLTHCCCEPCALCQEYRELENRGFDMVIGWQGN 152

Query: 151 VEKETRGVAMTQMAP--ITPM 169
           V+   +GVAM  MAP  + PM
Sbjct: 153 VQGGNQGVAMVPMAPAAVEPM 173

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326833993|gb|AEA08581.1| fw2.2 [Arachis stenosperma]

 Score =  189 bits (479), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 88/135 (65%), Positives = 106/135 (78%)

Query: 27  YQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALM 86
           YQ   K    WS+ LCDCFSD  NCCIT WCPC+TFG++AEIVD+GS+SCG +GAL AL+
Sbjct: 37  YQPPPKPPQEWSTSLCDCFSDCGNCCITYWCPCVTFGRVAEIVDRGSTSCGASGALYALV 96

Query: 87  CCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTG 146
           CC+  C C Y+CFYRSKMR+Q  LK   C DC++HCCC  CALCQE+REL  +GFDM+ G
Sbjct: 97  CCLIGCGCLYSCFYRSKMRRQLNLKGSDCGDCMIHCCCEPCALCQEYRELEMQGFDMHIG 156

Query: 147 WHGNVEKETRGVAMT 161
           WHGNVE+ +RGVAMT
Sbjct: 157 WHGNVEQRSRGVAMT 171

Source: Arachis stenosperma

Species: Arachis stenosperma

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573712|ref|XP_002527777.1| conserved hypothetical protein [Ricinus communis] gi|223532812|gb|EEF34587.1| conserved hypothetical protein [Ricinus communis]

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/159 (55%), Positives = 113/159 (71%), Gaps = 8/159 (5%)

Query: 24  NYRYQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALC 83
            Y   ++  +  +WSSGLC C SD KNCCITCWCPC+TFGQIAEI DKG++SC  +GA+ 
Sbjct: 41  QYPLSHQHGHGGAWSSGLCGCCSDVKNCCITCWCPCITFGQIAEIADKGTTSCATSGAIY 100

Query: 84  ALMCCVTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDM 143
            ++   T C C Y+C YRSK+R+QY L + PC DCLVHCCC  CALCQE+REL++RGFDM
Sbjct: 101 GILAWFTGCGCIYSCLYRSKLRQQYMLPESPCNDCLVHCCCEACALCQEYRELQSRGFDM 160

Query: 144 NTGWHGNVEKETRGVAMTQMAPITPMAPLPPVIEESMSR 182
           + GWHGN+E++  G AM         AP  PV + +M+R
Sbjct: 161 SIGWHGNMERQNGGGAMA--------APTAPVFQGTMTR 191

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496620|gb|AFK36376.1| unknown [Lotus japonicus]

 Score =  186 bits (471), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 88/146 (60%), Positives = 105/146 (71%), Gaps = 9/146 (6%)

Query: 37  WSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCY 96
           WS+GLCDCFS+  NCC+TCWCPC+TFG++AEIVDKGS+SCG +GAL  L+ C+  C C Y
Sbjct: 51  WSTGLCDCFSNCGNCCMTCWCPCVTFGRVAEIVDKGSTSCGASGALYTLITCLIGCGCLY 110

Query: 97  TCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWHGNVEKETR 156
           +CFYR KMR Q+ LK   C DCL HC C  C+LCQE+REL N+GFDM  GWHGNVE+ TR
Sbjct: 111 SCFYRGKMRSQHHLKGNDCLDCLTHCFCESCSLCQEYRELENQGFDMKIGWHGNVEQRTR 170

Query: 157 GVAMTQMAPITPMAPLPPVIEESMSR 182
           GV M   A         P +E  MSR
Sbjct: 171 GVQMASTA---------PAMEHGMSR 187

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573714|ref|XP_002527778.1| conserved hypothetical protein [Ricinus communis] gi|223532813|gb|EEF34588.1| conserved hypothetical protein [Ricinus communis]

 Score =  185 bits (469), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 88/154 (57%), Positives = 109/154 (70%), Gaps = 12/154 (7%)

Query: 29  NRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCC 88
           N  K +  WS+GLCDCFSD + CCIT WCPC+TFGQIAEIV+KG++SC   GA+ A++ C
Sbjct: 6   NNSKAQVPWSTGLCDCFSDRRTCCITFWCPCITFGQIAEIVEKGTTSCATTGAIYAILAC 65

Query: 89  VTCCPCCYTCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRNRGFDMNTGWH 148
            T C C Y+C YRSK+R QY L + PC DCLVHCCC  CALCQE+REL++RGFDM+ GW 
Sbjct: 66  FTGCGCIYSCMYRSKLRHQYMLPESPCNDCLVHCCCEACALCQEYRELKSRGFDMSIGWQ 125

Query: 149 GNVEKETRGVAMTQMAPITPMAPLPPVIEESMSR 182
           GNVE++  GVAM             PV +  M+R
Sbjct: 126 GNVERQKGGVAMA------------PVFQAGMTR 147

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	184
TAIR|locus:2006772	152	PCR2 "AT1G14870" [Arabidopsis	0.711	0.861	0.466	6.2e-30
UNIPROTKB|B6TYV8	181	CNR2 "Cell number regulator 2"	0.673	0.685	0.459	1.5e-28
TAIR|locus:2026910	160	PCR11 "AT1G68610" [Arabidopsis	0.793	0.912	0.411	1.5e-28
TAIR|locus:504954894	152	AT5G35525 "AT5G35525" [Arabido	0.755	0.914	0.418	7.3e-27
TAIR|locus:2006767	151	PCR1 "AT1G14880" [Arabidopsis	0.690	0.841	0.449	1.5e-26
UNIPROTKB|B6TZ45	191	CNR1 "Cell number regulator 1"	0.668	0.643	0.406	2.1e-22
TAIR|locus:2028526	224	AT1G49030 "AT1G49030" [Arabido	0.722	0.593	0.385	3.9e-21
TAIR|locus:2095092	184	AT3G18460 "AT3G18460" [Arabido	0.663	0.663	0.398	9.2e-20
TAIR|locus:2095002	133	AT3G18470 "AT3G18470" [Arabido	0.695	0.962	0.348	3.1e-19
TAIR|locus:2095082	184	AT3G18450 "AT3G18450" [Arabido	0.771	0.771	0.355	1.1e-18

TAIR|locus:2006772 PCR2 "AT1G14870" [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 63/135 (46%), Positives = 79/135 (58%)

Query:    34 KNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGXXXXXXXXXXXXX 93
             +  WS+G CDCFSD KNCCIT WCPC+TFGQ+AEIVD+GS+SCG  G             
Sbjct:    13 EGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCA 72

Query:    94 XXXXXFYRSKMRKQYTLKKKPXXXXXXXXXXXXXXXXQEHRELRNRGFDMNTGWHGNVEK 153
                  FYR KMR QY +K                   Q++REL++RG+DM+ GW GNVE+
Sbjct:    73 CIYSCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVER 132

Query:   154 ETR--GVAMTQMAPI 166
             +    GVAM   AP+
Sbjct:   133 QQNQGGVAMG--APV 145

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IMP

UNIPROTKB|B6TYV8 CNR2 "Cell number regulator 2" [Zea mays (taxid:4577)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 57/124 (45%), Positives = 74/124 (59%)

Query:    36 SWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGXXXXXXXXXXXXXXX 95
             +WS+GLC+CF D  NCC+TC CPC+TFGQ AEI+D+GS+SCG +G               
Sbjct:    46 AWSTGLCNCFDDCHNCCVTCVCPCITFGQTAEIIDRGSTSCGTSGALYALVMLLTGCQCV 105

Query:    96 XXXFYRSKMRKQYTLKKKPXXXXXXXXXXXXXXXXQEHRELRNRGFDMNTGWHGNVEKET 155
                FYR+KMR QY L+  P                QE+REL+ RGFDM+ GWH N+E++ 
Sbjct:   106 YSCFYRAKMRAQYGLQVSPCSDCCVHCCCQCCALCQEYRELKKRGFDMSIGWHANMERQG 165

Query:   156 RGVA 159
             R  A
Sbjct:   166 RAAA 169

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

TAIR|locus:2026910 PCR11 "AT1G68610" [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 63/153 (41%), Positives = 90/153 (58%)

Query:    28 QNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGXXXXXXX 87
             Q R+K K+ WS+ LC+C+ D  +CC+TCWCPC+ FG+IAE+VD+GS+SCGV+G       
Sbjct:    11 QGRIKAKD-WSTDLCECWMDINSCCLTCWCPCVAFGRIAEVVDRGSTSCGVSGAMYMIIF 69

Query:    88 XXXXXXXXXXX--FYRSKMRKQYTLKKKPXXXXXXXXXXXXXXXXQEHRELR-NRGFDMN 144
                          FYR+K+R QY LK++P                QE+R+L+ NR  D+ 
Sbjct:    70 MLTGYGGSSLYSCFYRTKLRAQYNLKERPCCDCCVHFCCEPCALCQEYRQLQHNRDLDLV 129

Query:   145 TGWHGNVEKETRGVAMTQMAPITPM-APLPPVI 176
              GWHGN+E+  R  A T  AP  P+ AP+  ++
Sbjct:   130 IGWHGNMERHARLAASTPSAP--PLQAPMSRLV 160

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

TAIR|locus:504954894 AT5G35525 "AT5G35525" [Arabidopsis thaliana (taxid:3702)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 59/141 (41%), Positives = 77/141 (54%)

Query:    22 MLNYRYQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGX 81
             M +   Q     +  WS+G CDCFSD +NCCIT  CPC+TFGQ+A+IVD+G++SCG  G 
Sbjct:     1 MASQHLQANPHAEGEWSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRGNTSCGTAGA 60

Query:    82 XXXXXXXXXXXXXXXXXFYRSKMRKQYTLKKKPXXXXXXXXXXXXXXXXQEHRELRNRGF 141
                               YR K+R QY ++                   QE+REL++RGF
Sbjct:    61 LYVLLAAITGCGCLYSCIYRGKIRAQYNIRGDGCTDCLKHFCCELCALTQEYRELKHRGF 120

Query:   142 DMNTGWHGNVEKETR--GVAM 160
             DM+ GW GNVEK+    GVAM
Sbjct:   121 DMSLGWAGNVEKQQNQGGVAM 141

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2006767 PCR1 "AT1G14880" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 58/129 (44%), Positives = 71/129 (55%)

Query:    34 KNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGXXXXXXXXXXXXX 93
             +  WS+G CDCFSD +NCCIT  CPC+TFGQ+AEIVD+GS SC   G             
Sbjct:    12 QGEWSTGFCDCFSDCRNCCITLCCPCITFGQVAEIVDRGSKSCCAAGALYMLIDLITSCG 71

Query:    94 XXXXXFYRSKMRKQYTLKKKPXXXXXXXXXXXXXXXXQEHRELRNRGFDMNTGWHGNVEK 153
                  FY  KMR QY +K                   Q++REL++RGFDM+ GW GN EK
Sbjct:    72 RMYACFYSGKMRAQYNIKGDGCTDCLKHFCCNLCALTQQYRELKHRGFDMSLGWAGNAEK 131

Query:   154 ETR--GVAM 160
             +    GVAM
Sbjct:   132 QQNQGGVAM 140

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

UNIPROTKB|B6TZ45 CNR1 "Cell number regulator 1" [Zea mays (taxid:4577)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 50/123 (40%), Positives = 66/123 (53%)

Query:    37 WSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGXXXXXXXXXXXXXXXX 96
             WS+GL  C  D  NC ITC CPC+TFGQ+A+IVDKG+  C  +G                
Sbjct:    51 WSTGLFHCMDDPGNCLITCLCPCVTFGQVADIVDKGTCPCIASGLVYGLICASTGMGCLY 110

Query:    97 XXFYRSKMRKQYTLKKKPXXXXXXXXXXXXXXXXQEHRELRNRGFDMNTGWHGNVEKETR 156
                YRSK+R +Y L +                  QE+REL+NRGFD+  GW  N++++ R
Sbjct:   111 SCLYRSKLRAEYDLDEGECPDILVHCCCEHLALCQEYRELKNRGFDLGIGWEANMDRQRR 170

Query:   157 GVA 159
             GVA
Sbjct:   171 GVA 173

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

TAIR|locus:2028526 AT1G49030 "AT1G49030" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 52/135 (38%), Positives = 72/135 (53%)

Query:    35 NSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGXXXXXXXXXXXXXX 94
             ++W+SGL DC +D +N  ITC  P +TFGQIAE++D+G++SCG  G              
Sbjct:    86 SNWTSGLFDCMNDGENALITCCFPFVTFGQIAEVIDEGATSCGTAGMLYGLICCLFAIPC 145

Query:    95 XXXXFYRSKMRKQYTLKKKPXXXXXXXXXXXXXXXXQEHRELRNRGFDMNTGWHGNVEKE 154
                  +R+K+R +Y L   P                QE+REL+NRG D + GW GNV+K+
Sbjct:   146 VYTCTFRTKLRSKYGLPDAPAPDWITHCFCEYCALCQEYRELKNRGLDPSIGWIGNVQKQ 205

Query:   155 TRGVAMTQMAPITPM 169
               G     MAP  PM
Sbjct:   206 RMGQQQEMMAP--PM 218

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2095092 AT3G18460 "AT3G18460" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 49/123 (39%), Positives = 64/123 (52%)

Query:    32 KNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGXXXXXXXXXXX 91
             + +N WSS L DC +D +N  ITC  PC+T GQIAEIVD+G++ C   G           
Sbjct:    49 QTQNLWSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDEGATPCATGGLLYGMIFFIGV 108

Query:    92 XXXXXXXFYRSKMRKQYTLKKKPXXXXXXXXXXXXXXXXQEHRELRNRGFDMNTGWHGNV 151
                    F R+KMR +Y L   P                QE+REL++RGFD N GW GNV
Sbjct:   109 PFVYSCMF-RAKMRNKYGLPDAPAPDWITHLFCEHCALCQEYRELKHRGFDPNIGWAGNV 167

Query:   152 EKE 154
             + +
Sbjct:   168 QAQ 170

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2095002 AT3G18470 "AT3G18470" [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 45/129 (34%), Positives = 66/129 (51%)

Query:    34 KNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGXXXXXXXXXXXXX 93
             +  W+SGL  C  D +  C+TC+CPC+TFG+IA+I D+G + CG  G             
Sbjct:     2 EKQWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLP 61

Query:    94 XXXXXFYRSKMRKQYTLKKKPXXXXXXXXXXXXXXXXQEHRELRNRGFDMNTGWHGNVEK 153
                   YR+K+R ++ L + P                QEHREL+ RG D + GW GN+++
Sbjct:    62 CLFSCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRGLDPSIGWSGNMQR 121

Query:   154 ETRGVAMTQ 162
              T    M+Q
Sbjct:   122 -TMAPPMSQ 129

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2095082 AT3G18450 "AT3G18450" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 53/149 (35%), Positives = 74/149 (49%)

Query:    13 PQTTTTGILMLNYRYQNRVKNKNSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKG 72
             P    TGI  +NY+     + +N WSS L DC +D +N  IT   PC+TFGQIAEIVD+G
Sbjct:    34 PANIPTGI-PVNYQ-----QTQNQWSSQLFDCMNDSENAVITLIAPCVTFGQIAEIVDEG 87

Query:    73 SSSCGVNGXXXXXXXXXXXXXXXXXXFYRSKMRKQYTLKKKPXXXXXXXXXXXXXXXXQE 132
             ++ C   G                  F R+++RK++ L   P                QE
Sbjct:    88 ATPCATAGLLYGALFFTGASFVYSYMF-RARIRKKFGLPDAPAPDWITHLVCMPFALCQE 146

Query:   133 HRELRNRGFDMNTGWHGNVEKETRGVAMT 161
             +REL++ GFD   GW GNV++  +   MT
Sbjct:   147 YRELKHHGFDPILGWAGNVQQAQQQEMMT 175

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LQU4	PCR2_ARATH	No assigned EC number	0.5562	0.75	0.9078	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	184
TIGR01571	104	TIGR01571, A_thal_Cys_rich, uncharacterized Cys-ri	5e-30
pfam04749	99	pfam04749, PLAC8, PLAC8 family	3e-29

>gnl|CDD|233473 TIGR01571, A_thal_Cys_rich, uncharacterized Cys-rich domain

 Score =  105 bits (265), Expect = 5e-30
 Identities = 46/102 (45%), Positives = 58/102 (56%)

Query: 37  WSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCY 96
           WS+GL DC  D + C    +CPC  FGQIAE +   +  C   G     M  +     CY
Sbjct: 3   WSTGLFDCCEDIRLCLCGLFCPCCLFGQIAETLGTFAGECLCGGLTAIAMSALCGFCGCY 62

Query: 97  TCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHRELRN 138
           TCF R K+R++Y ++  PC DCL H  C  CALCQEHREL+ 
Sbjct: 63  TCFIRIKLREKYGIQGAPCDDCLTHLFCCFCALCQEHRELKM 104

This model describes an uncharacterized domain of about 100 residues. It is common in plants but found also in Homo sapiens, Dictyostelium, and Leishmania; at least 12 distinct members are found in Arabidopsis. Most members of this family contain more than 10 per cent Cys, but no Cys residue is invariant across the family. Length = 104

>gnl|CDD|218240 pfam04749, PLAC8, PLAC8 family

 Score =  103 bits (259), Expect = 3e-29
 Identities = 48/100 (48%), Positives = 64/100 (64%), Gaps = 1/100 (1%)

Query: 37  WSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCY 96
           WS+GL DCF D   CC+  +CPC+ FG+ AE +D GS S   +  L  L+  +      Y
Sbjct: 1   WSTGLFDCFDDIGTCCLGLFCPCILFGRTAERLDDGSRSEDGSCCLYGLLYGL-LGFWLY 59

Query: 97  TCFYRSKMRKQYTLKKKPCCDCLVHCCCLHCALCQEHREL 136
           +CF R+K+R++Y ++  PC DCLVHC C  CALCQE REL
Sbjct: 60  SCFTRTKIREKYNIEGSPCDDCLVHCFCPPCALCQEDREL 99

This family includes the Placenta-specific gene 8 protein. Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	184
TIGR01571	104	A_thal_Cys_rich uncharacterized Cys-rich domain. T	99.98
PF04749	106	PLAC8: PLAC8 family; InterPro: IPR006461 This grou	99.96

>TIGR01571 A_thal_Cys_rich uncharacterized Cys-rich domain

Probab=99.98  E-value=3.7e-33  Score=210.29  Aligned_cols=104  Identities=44%  Similarity=0.927  Sum_probs=93.7

Q ss_pred             CCCCcCCccccCCcccccCccchhhHhhHHHHHHhcCCCCCCcchhhHhhhhhhhcCCCCCcchhHHHHHHHHhCCCCCC
Q 030039           35 NSWSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGSSSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYTLKKKP  114 (184)
Q Consensus        35 ~~W~~GLf~Cc~D~~~C~~s~~CPC~~~g~~a~rl~~G~~~C~~~~~l~~~l~~~~gc~~i~~~~~R~~IR~kygI~Gs~  114 (184)
                      ++|++|||||++|+++|++++||||+++|++++|++++..+|...++++.+++.+.++.+++.+.+|++||+||||+||.
T Consensus         1 ~~W~~gL~dC~~d~~~C~~~~~CPc~~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~R~~~R~ry~i~gs~   80 (104)
T TIGR01571         1 SNWSTGLFDCCEDIRLCLCGLFCPCCLFGQIAETLGTFAGECLCGGLTAIAMSALCGFCGCYTCFIRIKLREKYGIQGAP   80 (104)
T ss_pred             CCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCCCC
Confidence            58999999999999999999999999999999999977777877666566555555666788899999999999999999


Q ss_pred             ccchhhhhcChhHHhhHHHHHHHh
Q 030039          115 CCDCLVHCCCLHCALCQEHRELRN  138 (184)
Q Consensus       115 ~~Dc~~~~cC~~CaL~Q~~RElk~  138 (184)
                      ++|+++++||++|+++|++||||.
T Consensus        81 ~~D~~~~~~C~~C~lcQ~~RElk~  104 (104)
T TIGR01571        81 CDDCLTHLFCCFCALCQEHRELKM  104 (104)
T ss_pred             cccchHHHHhhhHHHHHHHHHHhC
Confidence            999999999999999999999984

This model describes an uncharacterized domain of about 100 residues. It is common in plants but found also in Homo sapiens, Dictyostelium, and Leishmania; at least 12 distinct members are found in Arabidopsis. Most members of this family contain more than 10 per cent Cys, but no Cys residue is invariant across the family.

>PF04749 PLAC8: PLAC8 family; InterPro: IPR006461 This group of sequences are described by a region of about 170 amino acids

Probab=99.96  E-value=1.3e-29  Score=187.83  Aligned_cols=99  Identities=46%  Similarity=1.105  Sum_probs=82.6

Q ss_pred             CCcCCccccCCcccccCccchhhHhhHHHHHHhcCCC-------CCCcchhhHhhhhhhhcCCCCCcchhHHHHHHHHhC
Q 030039           37 WSSGLCDCFSDYKNCCITCWCPCMTFGQIAEIVDKGS-------SSCGVNGALCALMCCVTCCPCCYTCFYRSKMRKQYT  109 (184)
Q Consensus        37 W~~GLf~Cc~D~~~C~~s~~CPC~~~g~~a~rl~~G~-------~~C~~~~~l~~~l~~~~gc~~i~~~~~R~~IR~kyg  109 (184)
                      |++|||||++|+++|++++||||++++++++|++++.       ..|....+++.+..++ ++.+++.+.+|++||+|||
T Consensus         1 W~~gl~~C~~d~~~c~~~~~cPc~~~~~~~~~l~~~~~~~~~~~~~C~~~~~~~~~~~~~-~l~~~~~~~~R~~iR~ry~   79 (106)
T PF04749_consen    1 WSTGLCDCFSDPGSCCLACFCPCCSFGQNAERLGDGPRSRGPAFGSCCLCFCCFGCAACL-GLGWCYGCSLRQQIRERYG   79 (106)
T ss_pred             CCCCCCCcCCChHHHHHHHHHHHHHHHHHHHHhccCCccCCCCCccHHHHHHHHHHHHHH-HHhHhhhhhHHHHHHHHhC
Confidence            9999999999999999999999999999999998754       3343333333322222 3345578899999999999


Q ss_pred             CCCCCccchhhhhcChhHHhhHHHHHH
Q 030039          110 LKKKPCCDCLVHCCCLHCALCQEHREL  136 (184)
Q Consensus       110 I~Gs~~~Dc~~~~cC~~CaL~Q~~REl  136 (184)
                      |+||.++|+++++||++|||+|++|||
T Consensus        80 I~g~~~~D~~~~~~C~~Cal~Q~~rEl  106 (106)
T PF04749_consen   80 IQGSCCEDCCCSCCCPPCALCQEAREL  106 (106)
T ss_pred             CCCCChhhhHHHHHHHHHHHHHHHhhC
Confidence            999999999999999999999999996

These proteins have highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterised protein. It is common in plants but found also in Homo sapiens (Human), Dictyostelium, and Leishmania; at least 12 distinct members are found in Arabidopsis. Most members of this family contain more than 10 per cent Cys, but no Cys residue is invariant across the family.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	184
1kil_E	49	Complexin I snare-complex binding region; helix bo	80.14

>1kil_E Complexin I snare-complex binding region; helix bound to four helix bundle, membrane protein; 2.30A {Rattus norvegicus} SCOP: h.1.15.1

Probab=80.14  E-value=0.78  Score=29.34  Aligned_cols=12  Identities=25%  Similarity=0.623  Sum_probs=10.7

Q ss_pred             hHHHHHHHHhCC
Q 030039           99 FYRSKMRKQYTL  110 (184)
Q Consensus        99 ~~R~~IR~kygI  110 (184)
                      ..|+.||.||||
T Consensus        38 ~mRq~IRdKY~i   49 (49)
T 1kil_E           38 VMRQGIRDKYGI   49 (49)
T ss_dssp             HHHHHHHHHHCC
T ss_pred             HHHHHHHHhcCC
Confidence            379999999998

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00