Citrus Sinensis ID: 030055

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFINVMLPTWMHLALMNPICGRR
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccccccccccccccccccccccccccccHHccccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHcccccccccccccccHHcccccHHHcccccccccccccccccccHHHHHHHHHHHHccHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MEKIAVMSVRSIRRAACVRSSIIAAANNHhlrhlsssrslfslsspaasipsksipfdcrSSLVmsigcnrsfsedvahmpvirdpEIQRAFKDLMAadwgelpasvIHDAKsalsrnnddkAGQEVLKNVFSAAEAVEEFIGIIMNIKMefddeiglsgEFINVMLPTWMHLALmnpicgrr
Flexible Loop (DISEMBL)
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFINVMLPTWMHLALMNPICGRR
Low Complexity Region (SEG)
MEKIAVMSVRSIRRAACVRSSIIAAANNHhlrhlsssrslfslsspaasipsksipfDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFINVMLPTWMHLALMNPICGRR
Disordered region (IsUnstruct)
******MSVRSIRRAACVRSSIIAAANNHHL***********************IPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIH*****************VLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFINVMLPTWMHLALMNPIC***
Disordered Region (DISOPRED)
*********RSIRRAACVRSSIIAAANNHHLRHLSSSRS******************DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHD***************EVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFINVMLPTWMHLALMNPICG**
Disordered Region (DISEMBL)
********VRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFINVMLPTWMHLALMNPICGRR
Disordered Region (DISPRO)
**KIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFINVMLPTWMHLALMNPICGR*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFINVMLPTWMHLALMNPICGRR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
Q9SX77	257	Uncharacterized protein A	yes	no	0.836	0.595	0.479	4e-36

>sp|Q9SX77|UMP6_ARATH Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis thaliana GN=At1g47420 PE=1 SV=1

 Score =  150 bits (380), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/169 (47%), Positives = 109/169 (64%), Gaps = 16/169 (9%)

Query: 9   VRSIRRAACVRSSIIAAANNHHL-RHLSSSRSLFSLSSPAAS------------IPSKSI 55
           +R   +A     S++  +  HH+ +HLS  R+L +++ P AS            I   S+
Sbjct: 15  IRGTAQAQARVGSLLQGS--HHIEKHLSRHRTLITVA-PNASVIGDVQINKGSFISYASV 71

Query: 56  PFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSAL 115
             D +    M +G  R FSEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+
Sbjct: 72  SRDLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAI 131

Query: 116 SRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFIN 164
           S+N DDKAGQE LKNVF AAEAVEEF GI+ +IKME DD IG+SGE + 
Sbjct: 132 SKNTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVK 180

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
224136704	239	predicted protein [Populus trichocarpa]	0.868	0.665	0.608	5e-47
118489030	239	unknown [Populus trichocarpa x Populus d	0.868	0.665	0.602	3e-46
225458573	242	PREDICTED: uncharacterized protein At1g4	0.918	0.694	0.522	3e-44
255538368	238	conserved hypothetical protein [Ricinus	0.846	0.651	0.585	2e-41
297852338	260	hypothetical protein ARALYDRAFT_473889 [	0.754	0.530	0.516	5e-35
18401719	257	succinate dehydrogenase 5 [Arabidopsis t	0.836	0.595	0.479	2e-34
351726377	225	uncharacterized protein LOC100527337 [Gl	0.568	0.462	0.625	7e-32
449470049	241	PREDICTED: uncharacterized protein At1g4	0.857	0.651	0.478	3e-31
351722341	228	uncharacterized protein LOC100527668 [Gl	0.825	0.662	0.487	7e-31
388502854	238	unknown [Medicago truncatula]	0.639	0.491	0.533	3e-27

>gi|224136704|ref|XP_002326924.1| predicted protein [Populus trichocarpa] gi|118481849|gb|ABK92861.1| unknown [Populus trichocarpa] gi|222835239|gb|EEE73674.1| predicted protein [Populus trichocarpa]

 Score =  192 bits (488), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 98/161 (60%), Positives = 118/161 (73%), Gaps = 2/161 (1%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCR 60
           MEK+  +  R+I RAAC+ SS  AA +   LRH  +SRSLF++S+P+ S   K IP D R
Sbjct: 1   MEKMGAL--RTIYRAACLGSSRSAAISQSQLRHHLASRSLFTVSAPSVSTTPKRIPCDFR 58

Query: 61  SSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNND 120
           S   MS+G +RSFSEDV H P I+DPEI   FKDLMA +W ELP +V+ DAK ALS+N D
Sbjct: 59  SPFAMSLGSSRSFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTD 118

Query: 121 DKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGE 161
           DK GQE+LKNVF AAEAVEEF G IM++KME DD IGLSGE
Sbjct: 119 DKVGQEILKNVFRAAEAVEEFGGKIMSLKMELDDIIGLSGE 159

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489030|gb|ABK96322.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 118/161 (73%), Gaps = 2/161 (1%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCR 60
           MEK+  +  R+I RAAC+ SS  AA +   LRH  +SRSLF++S+P+ S   K IP D R
Sbjct: 1   MEKMGAL--RTIYRAACLGSSRSAAISQSQLRHHLASRSLFTVSAPSVSTTPKRIPCDFR 58

Query: 61  SSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNND 120
           S   MS+G +R FSEDV H P I+DPEI   FKDLMA +W ELP +V+ DAK ALS+N D
Sbjct: 59  SPFAMSLGSSRFFSEDVTHFPDIKDPEILNVFKDLMATNWDELPNAVVSDAKKALSKNTD 118

Query: 121 DKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGE 161
           DKAGQ++LKNVF AAEAVEEF G IM++KME DD IGLSGE
Sbjct: 119 DKAGQDILKNVFRAAEAVEEFGGKIMSLKMELDDIIGLSGE 159

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458573|ref|XP_002284591.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial [Vitis vinifera] gi|147811478|emb|CAN63226.1| hypothetical protein VITISV_002665 [Vitis vinifera] gi|302142337|emb|CBI19540.3| unnamed protein product [Vitis vinifera]

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/180 (52%), Positives = 123/180 (68%), Gaps = 12/180 (6%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHH--LRHLSSSRSLFSLSSPAASIPSKSIPFD 58
           ME++ ++  RS+ R+A  RS   +A  NHH  LRH +SSRSLF+L +P A    +++P D
Sbjct: 1   MERMVLL--RSLFRSAAFRSCRFSAVVNHHQQLRHYASSRSLFNLFAPTAIASRQALPSD 58

Query: 59  CRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRN 118
           CR+   +SIG  RSFSEDV+H+PVI+DPEIQ  FKDLMAA W ELP SVI  A   LS+N
Sbjct: 59  CRTPFAVSIGSTRSFSEDVSHLPVIKDPEIQTVFKDLMAASWDELPDSVISSANKVLSKN 118

Query: 119 NDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSG--------EFINVMLPTW 170
            DDKAGQE L NVF AAEA  EF GI++ ++ME DD +G+SG        EF+N ++  +
Sbjct: 119 TDDKAGQEALANVFRAAEAAVEFGGILVTLRMEIDDLVGISGENVKPLPDEFVNALVTVF 178

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538368|ref|XP_002510249.1| conserved hypothetical protein [Ricinus communis] gi|223550950|gb|EEF52436.1| conserved hypothetical protein [Ricinus communis]

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/164 (58%), Positives = 120/164 (73%), Gaps = 9/164 (5%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAA-NNHHL--RHLSSSRSLFSLSSPAASIPSKSIPF 57
           MEK  V+ +RSI RAAC RSS IA A   HHL   HLSSSRS+FSL+S +  + S    F
Sbjct: 1   MEKKMVL-LRSICRAACFRSSRIADAFTQHHLLPHHLSSSRSIFSLASSSNRVSSD---F 56

Query: 58  DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
             R S  M +G  R FSEDV  +P I+DP++++AFK+LMAA W ELP  +++D K ALS+
Sbjct: 57  GYRFS--MGVGNRRCFSEDVTRLPAIQDPQVKKAFKNLMAASWDELPDPLLYDVKIALSK 114

Query: 118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGE 161
           N DDK+GQ++LKNVF AAEAVEEF GI+M++KME DD IGLSGE
Sbjct: 115 NTDDKSGQDILKNVFRAAEAVEEFGGILMSLKMELDDNIGLSGE 158

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297852338|ref|XP_002894050.1| hypothetical protein ARALYDRAFT_473889 [Arabidopsis lyrata subsp. lyrata] gi|297339892|gb|EFH70309.1| hypothetical protein ARALYDRAFT_473889 [Arabidopsis lyrata subsp. lyrata]

 Score =  152 bits (384), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 79/153 (51%), Positives = 105/153 (68%), Gaps = 15/153 (9%)

Query: 27  NNHHLR-HLSSSRSLFS------LSSPAASIP---SKSIPFDC-----RSSLVMSIGCNR 71
            +HH+  HLS  RSL +      L +P+AS+      +I + C     + S  + +G  R
Sbjct: 31  GSHHIEEHLSRHRSLMTVVDKSPLVTPSASVTIGKGSAISYGCARRDLQYSRAIGVGQVR 90

Query: 72  SFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNV 131
            FSEDV+HMP ++D ++  AFKDLMAADW ELP++V+ +AKSA+S+N DDKAGQE LKNV
Sbjct: 91  RFSEDVSHMPEMKDSDVLNAFKDLMAADWAELPSAVVRNAKSAISKNTDDKAGQEALKNV 150

Query: 132 FSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFIN 164
           F AAEAVEEF GI+ +IKME DD IG+SGE + 
Sbjct: 151 FRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVK 183

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18401719|ref|NP_564506.1| succinate dehydrogenase 5 [Arabidopsis thaliana] gi|25091506|sp|Q9SX77.1|UMP6_ARATH RecName: Full=Uncharacterized protein At1g47420, mitochondrial; Flags: Precursor gi|5668814|gb|AAD46040.1|AC007519_25 ESTs gb|H36253 and gb|AA04251 come from this gene [Arabidopsis thaliana] gi|12744995|gb|AAK06877.1|AF344326_1 unknown protein [Arabidopsis thaliana] gi|14334512|gb|AAK59453.1| unknown protein [Arabidopsis thaliana] gi|15450966|gb|AAK96754.1| Unknown protein [Arabidopsis thaliana] gi|17104551|gb|AAL34164.1| unknown protein [Arabidopsis thaliana] gi|21536627|gb|AAM60959.1| unknown [Arabidopsis thaliana] gi|23198274|gb|AAN15664.1| Unknown protein [Arabidopsis thaliana] gi|332194047|gb|AEE32168.1| succinate dehydrogenase 5 [Arabidopsis thaliana]

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/169 (47%), Positives = 109/169 (64%), Gaps = 16/169 (9%)

Query: 9   VRSIRRAACVRSSIIAAANNHHL-RHLSSSRSLFSLSSPAAS------------IPSKSI 55
           +R   +A     S++  +  HH+ +HLS  R+L +++ P AS            I   S+
Sbjct: 15  IRGTAQAQARVGSLLQGS--HHIEKHLSRHRTLITVA-PNASVIGDVQINKGSFISYASV 71

Query: 56  PFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSAL 115
             D +    M +G  R FSEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+
Sbjct: 72  SRDLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAI 131

Query: 116 SRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFIN 164
           S+N DDKAGQE LKNVF AAEAVEEF GI+ +IKME DD IG+SGE + 
Sbjct: 132 SKNTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGEGVK 180

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726377|ref|NP_001238404.1| uncharacterized protein LOC100527337 [Glycine max] gi|255632117|gb|ACU16411.1| unknown [Glycine max]

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 65/104 (62%), Positives = 83/104 (79%)

Query: 58  DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
           +CRS L M +G  R +SEDV HMP I+DP +  AFKDLMA  W ELP SVI D K+ALS+
Sbjct: 42  ECRSPLSMGLGSMRFYSEDVTHMPNIKDPVLYNAFKDLMAVSWSELPDSVISDVKNALSK 101

Query: 118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGE 161
           N DDKAG+EV++NVF AA+A+EEF GI++++K+EFDD IG+SGE
Sbjct: 102 NTDDKAGKEVVENVFCAAKAIEEFGGILISLKLEFDDSIGMSGE 145

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470049|ref|XP_004152731.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial-like [Cucumis sativus] gi|449496011|ref|XP_004160011.1| PREDICTED: uncharacterized protein At1g47420, mitochondrial-like [Cucumis sativus]

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/165 (47%), Positives = 106/165 (64%), Gaps = 8/165 (4%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHHLRHLSS--SRSLFSLSS--PAASIPSKSIP 56
           MEK  ++  RS+ R+   RS  IA   + +L   +   +RS F LSS  P+ S   + + 
Sbjct: 1   MEKTVIL--RSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVS 58

Query: 57  FDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALS 116
            DC  S    +G  R FS DV  MP I DP++Q  FKDLMAA W +LP +VI+D K+ALS
Sbjct: 59  SDC--SYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALS 116

Query: 117 RNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGE 161
            + DDKAG+E+++NVF AAEA EEF  +++N+KME DD IGLSGE
Sbjct: 117 GSTDDKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGE 161

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722341|ref|NP_001235705.1| uncharacterized protein LOC100527668 [Glycine max] gi|255632912|gb|ACU16810.1| unknown [Glycine max]

 Score =  138 bits (348), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 79/162 (48%), Positives = 103/162 (63%), Gaps = 11/162 (6%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHH-LRHLSSSRSLFSLSSPAASIPSKSIPFDC 59
           MEK+  M +R + R+   RS       NH  LR    SRS   L SP+ S        +C
Sbjct: 1   MEKM--MRLRPLFRSLSCRSYHAFPFINHVVLRPSLISRSPNPLPSPSHS--------EC 50

Query: 60  RSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNN 119
            S   M +G  R +SED+ H+P I+DP +  AFKDLMA  W ELP SV+ D K+ LS+N 
Sbjct: 51  MSPFSMGLGSMRFYSEDLTHVPNIKDPALYNAFKDLMAVSWSELPDSVVSDVKNVLSKNT 110

Query: 120 DDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGE 161
           DDKAG+E ++NVF AAEA+EEF GI++++K+EFDD IGLSGE
Sbjct: 111 DDKAGKEAVENVFRAAEAIEEFGGILVSLKLEFDDSIGLSGE 152

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502854|gb|AFK39493.1| unknown [Medicago truncatula]

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 83/118 (70%), Gaps = 1/118 (0%)

Query: 58  DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
           +CRS     IG  R +SE+V HMP I+DPE+   FKDL+A +W +L  +V+ DAK ALS+
Sbjct: 55  ECRSPFSNGIGSMRFYSEEVTHMPDIKDPELYSVFKDLLAENWSDLSDAVVSDAKHALSK 114

Query: 118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGEFINVMLPTWMHLAL 175
           + +D+AG+EV+ NVF AA+AVEEF GI+  +KME DD IGLSGE +   LP  M  AL
Sbjct: 115 STEDEAGKEVVTNVFRAAQAVEEFGGILNTLKMEIDDSIGLSGEDVKP-LPDHMQNAL 171

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
TAIR|locus:2015428	257	SDH5 "AT1G47420" [Arabidopsis	0.568	0.404	0.634	5.4e-31

TAIR|locus:2015428 SDH5 "AT1G47420" [Arabidopsis thaliana (taxid:3702)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 66/104 (63%), Positives = 81/104 (77%)

Query:    58 DCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSR 117
             D +    M +G  R FSEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+
Sbjct:    74 DLQYPRAMGMGQVRRFSEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISK 133

Query:   118 NNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGE 161
             N DDKAGQE LKNVF AAEAVEEF GI+ +IKME DD IG+SGE
Sbjct:   134 NTDDKAGQEALKNVFRAAEAVEEFGGILTSIKMEIDDSIGMSGE 177


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.133   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      183       155   0.00096  105 3  11 22  0.43    31
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  577 (61 KB)
  Total size of DFA:  138 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.72u 0.16s 12.88t   Elapsed:  00:00:00
  Total cpu time:  12.72u 0.16s 12.88t   Elapsed:  00:00:00
  Start:  Fri May 10 06:31:31 2013   End:  Fri May 10 06:31:31 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005749 "mitochondrial respiratory chain complex II" evidence=IDA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

GO:0080129 "proteasome core complex assembly" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00400264 SubName- Full=Putative uncharacterized protein; (240 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	183
pfam14290	238	pfam14290, DUF4370, Domain of unknown function (DU	6e-70
PLN02749	173	PLN02749, PLN02749, Uncharacterized protein At1g47	2e-47

>gnl|CDD|222654 pfam14290, DUF4370, Domain of unknown function (DUF4370)

 Score =  211 bits (540), Expect = 6e-70
 Identities = 99/163 (60%), Positives = 118/163 (72%), Gaps = 7/163 (4%)

Query: 1   MEKIAVMSVRSIRRAACVRSSIIAAANNHH--LRHLSSSRSLFSLSSPAASIPSKSIPFD 58
           MEK+  + +RS+ R+A  RSS  +AA+  H  LRH  SSRSLF L+SPA+      +  D
Sbjct: 1   MEKM--VLLRSLFRSAPFRSSRSSAASQGHHQLRHHLSSRSLFPLASPASP---SRLSSD 55

Query: 59  CRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRN 118
           CR    MS G  R FSEDV H+P I+DPEI+ AFKDLMAA W ELP SV+ DAK ALS+N
Sbjct: 56  CRYPFAMSWGSRRFFSEDVTHLPAIKDPEIENAFKDLMAASWDELPDSVVSDAKKALSKN 115

Query: 119 NDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGE 161
            DDKAGQE LKNVF AAEAVEEF GI++++KME DD IGLSGE
Sbjct: 116 TDDKAGQEALKNVFRAAEAVEEFGGILVSLKMELDDLIGLSGE 158

Length = 238

>gnl|CDD|178350 PLN02749, PLN02749, Uncharacterized protein At1g47420

 Score =  152 bits (386), Expect = 2e-47
 Identities = 65/91 (71%), Positives = 76/91 (83%)

Query: 71  RSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKN 130
           R FSEDV+H+P I DPEI +AFKDLMAA W ELP SV++DAK ALS+N DDKAGQE LKN
Sbjct: 3   RRFSEDVSHLPEISDPEILKAFKDLMAASWDELPDSVVNDAKKALSKNTDDKAGQEALKN 62

Query: 131 VFSAAEAVEEFIGIIMNIKMEFDDEIGLSGE 161
           VF AAEAVEEF G +++++ME DD IGLSGE
Sbjct: 63  VFRAAEAVEEFGGTLVSLRMEIDDLIGLSGE 93

Length = 173

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
PF14290	239	DUF4370: Domain of unknown function (DUF4370)	100.0
PLN02749	173	Uncharacterized protein At1g47420	100.0

>PF14290 DUF4370: Domain of unknown function (DUF4370)

Probab=100.00  E-value=3.9e-79  Score=517.16  Aligned_cols=175  Identities=57%  Similarity=0.848  Sum_probs=164.7

Q ss_pred             CchhhHHHHHHHHHHHhhhhhHHHHh-h-hhhhhhhhccccccccCCCCCCCCCCCCCCCcCccccccccccccccccCC
Q 030055            1 MEKIAVMSVRSIRRAACVRSSIIAAA-N-NHHLRHLSSSRSLFSLSSPAASIPSKSIPFDCRSSLVMSIGCNRSFSEDVA   78 (183)
Q Consensus         1 mek~~m~~lrs~~r~a~~~s~~~~~~-~-~~~~~h~ss~~sl~t~~~~~~~~ps~~~~~d~~~~~s~~~g~~R~fS~d~~   78 (183)
                      ||| ||+.||++||++|+||++.++. + +|+++|..+++++++++++..  +. ++++||++||+||||++|+||+|++
T Consensus         1 m~~-~~~~lr~~~R~~~~~s~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~--~~-~~~s~~~~~~a~s~~~~R~fS~d~~   76 (239)
T PF14290_consen    1 MEK-AMSALRSLLRSAALRSSRSSSASRSHHQIRHHLSSRSLFTLSSPSS--RN-RISSDCGGPFAMSWGSRRFFSEDVS   76 (239)
T ss_pred             Cch-HHHHHHHHHHHHHHHHhhhhhhhcchhhhhhhhhhccccCCCCccc--cc-cccccccCCcccccchhhhcccccc
Confidence            887 5999999999999999987555 3 377788558999999998873  33 8899999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccC
Q 030055           79 HMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGL  158 (183)
Q Consensus        79 hlP~i~Dpei~~afKdLmAasW~elp~svv~~ak~alSk~tDDkAGqeaLknvfrAAeAvEeFgGiL~sLrmeiDDl~Gl  158 (183)
                      |||+|+||||++|||||||+||+|||++||++|||||||||||||||||||||||||||||||||+|++|||||||||||
T Consensus        77 hlP~i~Dp~i~~afKdLmAasW~elp~svv~~akkalSk~tdD~AGqeaL~nvfRAAeAvEeFgG~L~tLrm~idDl~Gl  156 (239)
T PF14290_consen   77 HLPAISDPEIEKAFKDLMAASWDELPDSVVNEAKKALSKNTDDKAGQEALKNVFRAAEAVEEFGGILVTLRMEIDDLCGL  156 (239)
T ss_pred             cCCCCCCHHHHHHHHHHHhcchhhCCHHHHHHHHHHHhccCccchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccccCCCCchHHHHHhhcccc
Q 030055          159 SGEFINVMLPTWMHLALMNPIC  180 (183)
Q Consensus       159 SGEnV~~PLPd~~~~Av~~a~~  180 (183)
                      |||||| ||||+++|||+++|+
T Consensus       157 sGEnv~-PLP~~~~~Al~t~y~  177 (239)
T PF14290_consen  157 SGENVK-PLPDYIENALRTAYK  177 (239)
T ss_pred             CCCCCC-CCcHHHHHHHHHHHH
Confidence            999999 999999999999996

>PLN02749 Uncharacterized protein At1g47420

Probab=100.00  E-value=2e-63  Score=406.77  Aligned_cols=111  Identities=62%  Similarity=0.928  Sum_probs=109.8

Q ss_pred             ccccccccCCCCCCCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030055           69 CNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNI  148 (183)
Q Consensus        69 ~~R~fS~d~~hlP~i~Dpei~~afKdLmAasW~elp~svv~~ak~alSk~tDDkAGqeaLknvfrAAeAvEeFgGiL~sL  148 (183)
                      ++|+||+|++|||+|+||+|++|||||||+||+|||++|+++||+|||||||||||||||+||||||||||||||+|++|
T Consensus         1 ~~R~fs~d~~~lP~i~Dp~i~~afkdLma~sW~elp~sv~~~~kkalsk~tddkagqeaL~nvfrAAeAveeFgG~L~sL   80 (173)
T PLN02749          1 LRRRFSEDVSHLPEISDPEILKAFKDLMAASWDELPDSVVNDAKKALSKNTDDKAGQEALKNVFRAAEAVEEFGGTLVSL   80 (173)
T ss_pred             CccccccccccCCCCCCHHHHHHHHHHHhcchhhCChHHHHHHHHHHhcCCcchhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhcccCCccccCCCCchHHHHHhhcccc
Q 030055          149 KMEFDDEIGLSGEFINVMLPTWMHLALMNPIC  180 (183)
Q Consensus       149 rmeiDDl~GlSGEnV~~PLPd~~~~Av~~a~~  180 (183)
                      |||||||||+|||||| ||||+++|||+++|+
T Consensus        81 rmeidDl~GlsGEnv~-PLPd~~~~Al~tay~  111 (173)
T PLN02749         81 RMEIDDLIGLSGENVK-PLPDYIENALETAYQ  111 (173)
T ss_pred             HHHHHHhcCCCCCCCC-CCcHHHHHHHHHHHH
Confidence            9999999999999999 999999999999996

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00