Citrus Sinensis ID: 030228

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
Protein Sequence
MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQQNQMAQNSSPLMPTFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTVVPWWMHDHVNHS
Secondary Structure (PSIPRED)
cHHHHHHHHHccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccc
Coil and Loop (DISEMBL)
MERILERYERNAYVEQQLVTndaelqgcwsleypnlkSRIEVLEKNIRnfmggdleplsLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQQNqmaqnssplmptfpsltiggniqvmmrgsvidepdenqtrqnmrSTVVpwwmhdhvnhs
Flexible Loop (DISEMBL)
merileryernayVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLEQQIDTSLkrlrnrknqlthesisdlqkrERALQDQNNMLAKKLKEKERTLTEQQnqmaqnssplmptFPSLTIGGNIQVMMRGSVIdepdenqtrqnMRSTVVPWWMHDHVNHS
Low Complexity Region (SEG)
MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAkklkekertlteQQNQMAQNSSPLMPTFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTVVPWWMHDHVNHS
Disordered region (IsUnstruct)
*******YERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLEQ*********************************************************************LTIGGNIQVM********************TVVPWWMH******
Disordered Region (DISOPRED)
MERILERYER*******************SLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLEQQIDT*****RNRKNQLTHESISDLQKRERALQDQNNMLA*********************************G***************************VVPWW*HDH****
Disordered Region (DISEMBL)
MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKER************SSPLMPTFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTVVPWWMHDHVNHS
Disordered Region (DISPRO)
MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLT***************************************************VPWW********
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLxxxxxxxxxxxxxxxxxxxxxSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSSPLMPTFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTVVPWWMHDHVNHS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	181	2.2.26 [Sep-21-2011]
Q42429	250	Agamous-like MADS-box pro	N/A	no	0.983	0.712	0.452	8e-36
Q38876	242	Agamous-like MADS-box pro	yes	no	0.745	0.557	0.543	2e-34
O22328	250	Agamous-like MADS-box pro	N/A	no	0.977	0.708	0.470	5e-34
Q41276	254	Floral homeotic protein A	N/A	no	0.696	0.496	0.531	6e-33
Q40170	227	Agamous-like MADS-box pro	N/A	no	0.718	0.572	0.541	2e-32
Q41274	241	Agamous-like MADS-box pro	N/A	no	0.922	0.692	0.458	2e-32
Q39371	256	Floral homeotic protein A	N/A	no	0.679	0.480	0.536	3e-32
Q39375	251	Transcription factor CAUL	N/A	no	0.801	0.577	0.456	3e-32
Q8GTF4	256	Floral homeotic protein A	N/A	no	0.679	0.480	0.520	3e-32
B4YPV4	256	Floral homeotic protein A	N/A	no	0.679	0.480	0.520	3e-32

>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1

 Score =  149 bits (377), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 85/188 (45%), Positives = 129/188 (68%), Gaps = 10/188 (5%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           MER+LERYER ++ E+QLV  D    G W+LE+  LK+R+EVL++N ++++G DLE L++
Sbjct: 63  MERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNM 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLT-- 118
           +ELQ LE Q+D++LK +R+RKNQL HESIS LQK++RALQ+QNN L+KK+KE+E+ +   
Sbjct: 123 KELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVAQQ 182

Query: 119 ---EQQNQMAQNSSPLMP-TFPSLTIG---GNIQVMMRGSVIDEPDENQTRQNMRSTVVP 171
              +QQN    +S+ ++P    S  +G    N  V+  G V +  + +Q +    +TV+P
Sbjct: 183 NQWDQQNHEINSSTFVLPQQLDSPHLGEAYQNTNVVDNGEV-EGGNSSQQQGAANNTVMP 241

Query: 172 WWMHDHVN 179
            WM  H+N
Sbjct: 242 QWMLRHLN 249

Probable transcription factor.
Solanum tuberosum (taxid: 4113)

>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1

 Score =  145 bits (366), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/138 (54%), Positives = 100/138 (72%), Gaps = 3/138 (2%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           MERILERY+R  Y ++QLV  D      W LE+  LK+R+EVLEKN RNFMG DL+ LSL
Sbjct: 63  MERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSL 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           +ELQ LE Q+D ++K +R+RKNQ   ESIS LQK+++ALQD NN L KK+KE+E+   +Q
Sbjct: 123 KELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTGQQ 182

Query: 121 QNQMAQ---NSSPLMPTF 135
           + Q+ Q   +SS L+P +
Sbjct: 183 EGQLVQCSNSSSVLLPQY 200

Probable transcription factor that promotes early floral meristem identity in synergy with APETALA1 and CAULIFLOWER. Is required subsequently for the transition of an inflorescence meristem into a floral meristem. Seems to be partially redundant to the function of APETALA1 and CAULIFLOWER in the up-regulation of LEAFY. Is also required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique. Probably not required for fruit elongation but instead is required to prevent ectopic activity of IND.

Arabidopsis thaliana (taxid: 3702)

>sp|O22328|AGL8_SOLCO Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1

 Score =  143 bits (361), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/189 (47%), Positives = 125/189 (66%), Gaps = 12/189 (6%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           MER+LERYER ++ E+QLV  D    G W+LE   LK+R+EVL++N + ++G DLE L++
Sbjct: 63  MERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNM 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           +ELQ LE Q+ ++LK +R+RKNQL HESIS LQK++RALQ+QNN L+KK+KE+E+ + EQ
Sbjct: 123 KELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEV-EQ 181

Query: 121 QNQMAQ-----NSS----PLMPTFPSLTIGG-NIQVMMRGSVIDEPDENQTRQNMRSTVV 170
           QNQ  Q     NSS    P     P L     N  V+  G V +  + +Q +    +TV+
Sbjct: 182 QNQWDQQNHEINSSTFVLPQQLDSPHLGEASQNTNVVDNGEV-EGGNSSQXQGAANNTVM 240

Query: 171 PWWMHDHVN 179
           P WM  H+N
Sbjct: 241 PQWMVRHLN 249

Probable transcription factor.

Solanum commersonii (taxid: 4109)

>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1

 Score =  140 bits (352), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 67/126 (53%), Positives = 104/126 (82%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME+ILERYER +Y E+QL+  ++++   WS+EY  LK++IE+LE+N R+++G DL+ +S 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSS 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           +ELQ LEQQ+DT+LK +R+RKNQL H+SI++LQ++E+A+Q+QN+ML+K++KE+E+ L  Q
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQ 182

Query: 121 QNQMAQ 126
           Q Q  Q
Sbjct: 183 QEQWDQ 188

Controls floral meristem identity. Is also required for normal development of sepals and petals. Is required for the transition of an influorescence meristem into a floral meristem. Interacts with LEAFY.

Sinapis alba (taxid: 3728)

>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1

 Score =  138 bits (348), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/133 (54%), Positives = 100/133 (75%), Gaps = 3/133 (2%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           MERILERYER ++ E+QLV  D      W+LE+  LK+R+EVL++N ++++G DLE LS+
Sbjct: 63  MERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSM 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           +ELQ LE Q+D++LK +R+RKNQL HESIS LQK++RALQ+QNN L+KK+KE+E++    
Sbjct: 123 KELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREKS---A 179

Query: 121 QNQMAQNSSPLMP 133
           Q     NSS L  
Sbjct: 180 QQISGINSSSLFA 192

Probable transcription factor.

Solanum lycopersicum (taxid: 4081)

>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/179 (45%), Positives = 113/179 (63%), Gaps = 12/179 (6%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME+ILERY+R  Y ++QLV  D      W LE+  LK+R+EVLEKN RNFMG DL+ LSL
Sbjct: 63  MEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSL 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           +ELQ LE Q+  ++K +R+RKNQ   ESIS LQK+++ LQD NN L KK+KE+E+    Q
Sbjct: 123 KELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREKNTVHQ 182

Query: 121 QNQMAQ---NSSPLMPTFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMR--STVVPWWM 174
           + Q+ Q   NSS L P +  LT   +      G V     EN+   ++   ++++P WM
Sbjct: 183 EVQLIQCSNNSSILQPQY-CLTSSRD------GFVGRVEGENEGASSLAEPNSLLPAWM 234

Probable transcription factor.

Sinapis alba (taxid: 3728)

>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1 PE=2 SV=1

 Score =  137 bits (346), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/123 (53%), Positives = 102/123 (82%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME+ILERYER +Y E+QL+  ++++   WS+EY  LK++IE+LE+N R+++G DL+ +S 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           +ELQ LEQQ+DT+LK +R+RKNQL +ESI++LQ++E+A+Q+QN+ML+K++KE+E  L  Q
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYESINELQRKEKAIQEQNSMLSKQIKERENVLRAQ 182

Query: 121 QNQ 123
           Q Q
Sbjct: 183 QEQ 185

Transcription factor that promotes early floral meristem identity in synergy with LEAFY. Displays a redundant function with CAULIFLOWER in the up-regulation of LEAFY. Required subsequently for the transition of an inflorescence meristem into a floral meristem, and for the normal development of sepals and petals in flowers. Regulates positively B class homeotic proteins.

Brassica oleracea (taxid: 3712)

>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var. italica GN=CAL PE=2 SV=1

 Score =  137 bits (346), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 110/160 (68%), Gaps = 15/160 (9%)

Query: 1   MERILERYERNAYVEQQLVTNDAEL--QGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPL 58
           ME++LE YER +Y E+QL   D+ +  Q  WS+EY  LK++IE+LE+N R+++G DLE +
Sbjct: 63  MEKVLEHYERYSYAEKQLKVPDSHVNAQTNWSVEYSRLKAKIELLERNQRHYLGEDLESI 122

Query: 59  SLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLT 118
           S++ELQ LEQQ+DTSLK +R+RKNQL HES++ LQ++E+ + ++N+MLAK+++E+E  L 
Sbjct: 123 SIKELQNLEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLAKQIRERESILR 182

Query: 119 EQQNQMAQNS-------------SPLMPTFPSLTIGGNIQ 145
             QNQ  Q +             +P M + P L +GG  Q
Sbjct: 183 THQNQSEQQNRSHHVAPQPQPQLNPYMASSPFLNMGGMYQ 222

Probable transcription factor that promotes early floral meristem identity in synergy with APETALA1, FRUITFULL and LEAFY. Is required subsequently for the transition of an inflorescence meristem into a floral meristem. Seems to be partially redundant to the function of APETALA1.

Brassica oleracea var. italica (taxid: 36774)

>sp|Q8GTF4|AP1C_BRAOB Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. botrytis GN=AP1C PE=2 SV=1

 Score =  137 bits (346), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/123 (52%), Positives = 103/123 (83%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME+ILERYER +Y E+QL+  ++++   WS+EY  LK++IE+LE+N R+++G DL+ +S 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           +ELQ LEQQ+DT+LK +R+RKNQL ++S+++LQ++E+A+Q+QN+ML+K++KE+E+ L  Q
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREKVLMAQ 182

Query: 121 QNQ 123
           Q Q
Sbjct: 183 QEQ 185

Transcription factor that promotes early floral meristem identity in synergy with LEAFY. Displays a redundant function with CAULIFLOWER in the up-regulation of LEAFY. Required subsequently for the transition of an inflorescence meristem into a floral meristem, and for the normal development of sepals and petals in flowers. Regulates positively B class homeotic proteins.

Brassica oleracea var. botrytis (taxid: 3715)

>sp|B4YPV4|AP1C_BRAOA Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. alboglabra GN=AP1C PE=3 SV=1

 Score =  137 bits (346), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/123 (52%), Positives = 103/123 (83%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME+ILERYER +Y E+QL+  ++++   WS+EY  LK++IE+LE+N R+++G DL+ +S 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           +ELQ LEQQ+DT+LK +R+RKNQL ++S+++LQ++E+A+Q+QN+ML+K++KE+E+ L  Q
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREKVLMAQ 182

Query: 121 QNQ 123
           Q Q
Sbjct: 183 QEQ 185

Transcription factor that promotes early floral meristem identity in synergy with LEAFY. Displays a redundant function with CAULIFLOWER in the up-regulation of LEAFY. Required subsequently for the transition of an inflorescence meristem into a floral meristem, and for the normal development of sepals and petals in flowers. Regulates positively B class homeotic proteins.

Brassica oleracea var. alboglabra (taxid: 3714)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
197244649	248	APETALA1/FRUITFUL like protein [Hydrange	0.966	0.705	0.550	2e-46
73537279	242	AGL2-like MADS box 4 [Castanea mollissim	0.944	0.706	0.531	7e-46
32478023	216	FRUITFULL-like MADS-box [Heuchera americ	0.961	0.805	0.549	3e-44
397911036	220	FRUITFULL, partial [Gunnera manicata]	0.922	0.759	0.55	3e-44
32478065	213	FRUITFULL-like MADS-box [Petunia x hybri	0.939	0.798	0.521	1e-43
255569908	188	mads box protein, putative [Ricinus comm	0.961	0.925	0.523	2e-43
315418848	247	FUL-like protein [Actinidia chinensis]	0.917	0.672	0.526	3e-43
237784465	255	TDR4/Ful-like MADS-box protein [Vacciniu	0.944	0.670	0.51	1e-42
224120672	255	predicted protein [Populus trichocarpa]	0.955	0.678	0.494	7e-42
148540534	243	MADS-box transcription factor FUL-like 2	0.966	0.720	0.527	2e-41

>gi|197244649|dbj|BAG68946.1| APETALA1/FRUITFUL like protein [Hydrangea macrophylla]

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/189 (55%), Positives = 134/189 (70%), Gaps = 14/189 (7%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           M  ILERYER +Y E QLV N+++ QG WSLE+P L ++IEVL++NIR+++G DL+PLSL
Sbjct: 63  MGSILERYERYSYAESQLVANNSQPQGSWSLEHPKLMAKIEVLQRNIRHYVGEDLDPLSL 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTE- 119
           RELQ LEQQIDT+LKR+R RKNQL HES+SDLQK+ERALQ+QNN+LAKKLK+ E+T+ E 
Sbjct: 123 RELQSLEQQIDTALKRIRTRKNQLMHESVSDLQKKERALQEQNNLLAKKLKDNEKTVAER 182

Query: 120 ---QQNQMAQNSSPLM------PTFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTVV 170
              +Q  +  N+S  M      P   SLTIGGN Q       I + +  Q R N  + ++
Sbjct: 183 PQLKQQNLPHNTSTFMFPPPPQPLLHSLTIGGNFQ---ENVSIGQENGAQIRPN-SNPLM 238

Query: 171 PWWMHDHVN 179
           P WM  HVN
Sbjct: 239 PPWMLRHVN 247

Source: Hydrangea macrophylla

Species: Hydrangea macrophylla

Genus: Hydrangea

Family: Hydrangeaceae

Order: Cornales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|73537279|gb|AAZ77749.1| AGL2-like MADS box 4 [Castanea mollissima]

 Score =  188 bits (478), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 100/188 (53%), Positives = 128/188 (68%), Gaps = 17/188 (9%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME ILERYER ++ E+QLV  D+E QG W +E+P L +R+EVL++NIRNFMG DL+PLS 
Sbjct: 62  METILERYERYSFAERQLVATDSESQGGWCMEFPKLTARVEVLQRNIRNFMGEDLDPLSF 121

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           RELQ LEQQID  LKR+R RKNQL HES+ +LQK+E++LQ+QN++LAKKLKE E+ + EQ
Sbjct: 122 RELQNLEQQIDAGLKRIRTRKNQLMHESVMELQKKEKSLQEQNSVLAKKLKENEKNIPEQ 181

Query: 121 QNQ---------MAQNSSPLMPTFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTVVP 171
            +Q         + Q   P   + PSLTIGG  Q       +DE    QT    R T++P
Sbjct: 182 AHQEQPSLGLLSLPQQPMPSTLSLPSLTIGGAFQ----ERAVDEDAGVQT----RPTLMP 233

Query: 172 WWMHDHVN 179
            WM  HVN
Sbjct: 234 PWMLRHVN 241

Source: Castanea mollissima

Species: Castanea mollissima

Genus: Castanea

Family: Fagaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|32478023|gb|AAP83373.1| FRUITFULL-like MADS-box [Heuchera americana]

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/191 (54%), Positives = 136/191 (71%), Gaps = 17/191 (8%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME+ILERYER +Y E+QL+  D+ELQG WSLE P L +RIEVL++NIR +MG DL+PLSL
Sbjct: 30  MEKILERYERYSYAERQLIATDSELQGNWSLECPKLMARIEVLQRNIRQYMGQDLDPLSL 89

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTE- 119
           RELQ LEQQ+D++LKR+R RKNQL HESI++LQK+E+ALQ+QNN LAKK+KE E+T+ E 
Sbjct: 90  RELQNLEQQLDSALKRIRTRKNQLMHESIAELQKKEKALQEQNNQLAKKIKENEKTVGEN 149

Query: 120 ----QQNQMAQNSS----PLMPT----FPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRS 167
               Q NQ   +SS    P +P      PSL IG   Q   RG V++     QTR +  +
Sbjct: 150 AQWQQPNQGHTSSSFMLAPALPPPSLQLPSLNIGDTFQA--RG-VMNGDAGAQTRPST-N 205

Query: 168 TVVPWWMHDHV 178
           T++P WM  H+
Sbjct: 206 TLMPPWMLRHL 216

Source: Heuchera americana

Species: Heuchera americana

Genus: Heuchera

Family: Saxifragaceae

Order: Saxifragales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|397911036|gb|AFO68794.1| FRUITFULL, partial [Gunnera manicata]

 Score =  183 bits (464), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/180 (55%), Positives = 126/180 (70%), Gaps = 13/180 (7%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME ILERYER +Y E+QLV  D+E QG W+ EYP L ++IEVL++N R+ MG DL+PLSL
Sbjct: 47  MESILERYERYSYAERQLVARDSEFQGSWTEEYPQLLAKIEVLQRNQRHLMGEDLDPLSL 106

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLT-- 118
           ++LQYLEQQ+DT+LKR+R R+NQL HESIS LQK+E+ALQDQNN+LAKK+KE E+ +   
Sbjct: 107 KKLQYLEQQLDTALKRVRTRRNQLMHESISQLQKKEKALQDQNNLLAKKVKENEKAMAAR 166

Query: 119 ---EQQNQMAQNSSPLMPTFPSLTIG-GNIQVMMRGSVIDEPDENQTRQNMRSTVVPWWM 174
              E QN M     PL    PSLTIG G  Q    G  I E +  +  Q   +T++P WM
Sbjct: 167 MQWEHQNFMIPQPQPL----PSLTIGCGAFQA---GGTICEDNGTRAHQTPTNTLMPPWM 219

Source: Gunnera manicata

Species: Gunnera manicata

Genus: Gunnera

Family: Gunneraceae

Order: Gunnerales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|32478065|gb|AAP83394.1| FRUITFULL-like MADS-box [Petunia x hybrida]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/190 (52%), Positives = 130/190 (68%), Gaps = 20/190 (10%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME ILERYER +Y E QLV N+++ QG WSLE+P L ++IEVL++NIR+++G +L+PLSL
Sbjct: 32  MESILERYERYSYAESQLVANNSQPQGNWSLEHPKLMAKIEVLQRNIRHYVGEELDPLSL 91

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           RELQ LEQQIDT+LKR+R RKNQL HES+S+LQK+ERALQ+QNN+LAKKLK+ E+T+ E+
Sbjct: 92  RELQSLEQQIDTALKRIRTRKNQLMHESVSELQKKERALQEQNNLLAKKLKDNEKTVAER 151

Query: 121 QNQMAQNSSP-----------LMPTFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTV 169
             Q+ Q + P                 SLTIGGN Q+         P+ N         +
Sbjct: 152 P-QLEQQNLPHNTPTFMFPPPPQSLLHSLTIGGNFQIGQENGAQIRPNSN--------PL 202

Query: 170 VPWWMHDHVN 179
           +P WM  HVN
Sbjct: 203 MPPWMLRHVN 212

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569908|ref|XP_002525917.1| mads box protein, putative [Ricinus communis] gi|223534746|gb|EEF36437.1| mads box protein, putative [Ricinus communis]

 Score =  180 bits (456), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/189 (52%), Positives = 130/189 (68%), Gaps = 15/189 (7%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME IL+RYER A  E+Q V ND+E QG W LEYP L +RIE+LE+++RNF G DL P+SL
Sbjct: 1   MEAILDRYERCASAEKQAVPNDSEKQGTWCLEYPKLVARIEILERSLRNFAGKDLGPMSL 60

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLT-- 118
           RELQ+LEQQIDT+LKR+R+RKNQL HES++ LQK ER+L +QNNMLAK+LKE E+TLT  
Sbjct: 61  RELQHLEQQIDTALKRVRSRKNQLYHESLAALQKNERSLHEQNNMLAKQLKENEKTLTRE 120

Query: 119 ----EQQNQMAQNSSPLMP-----TFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTV 169
               EQQN ++QN++   P     + PS T  GN Q       ++E +E+       +  
Sbjct: 121 REQWEQQN-LSQNAAAFFPPQPMLSLPSPTTCGNPQTR---EFLNENEESTAHAQPNTMQ 176

Query: 170 VPWWMHDHV 178
           +P WM  H+
Sbjct: 177 MPPWMLRHL 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|315418848|gb|ADU15471.1| FUL-like protein [Actinidia chinensis]

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/190 (52%), Positives = 135/190 (71%), Gaps = 24/190 (12%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           MERILE+Y+R +YVE+QL   D E Q  WSLE+P L +R+EVL++NIR+++G DL+PL+L
Sbjct: 63  MERILEKYDRYSYVERQLGAPDTESQPNWSLEHPKLSARVEVLQRNIRHYVGEDLDPLNL 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTE- 119
           RELQ++EQQIDT+L+R+R RKNQL HESIS+LQK+++ LQ+Q N+LAKK+KE E+TLTE 
Sbjct: 123 RELQHVEQQIDTALRRIRTRKNQLMHESISELQKKQKTLQEQTNILAKKVKENEKTLTEH 182

Query: 120 ---QQNQMAQNSSPLMPTF-----------PSLTIGGNIQVMMRGSVIDEPDENQTRQNM 165
              +Q  + QNS    PTF           PSLTIGG  QV  RG+   E D  Q +   
Sbjct: 183 FQREQESLGQNS----PTFMLPQPPRPPQLPSLTIGGPFQV--RGA---EEDGAQIQPTS 233

Query: 166 RSTVVPWWMH 175
            + ++PW +H
Sbjct: 234 STLMLPWMLH 243

Source: Actinidia chinensis

Species: Actinidia chinensis

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|237784465|gb|ACR19996.1| TDR4/Ful-like MADS-box protein [Vaccinium myrtillus]

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/200 (51%), Positives = 131/200 (65%), Gaps = 29/200 (14%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME ILE+YE  +Y E+QLV  ++E Q  W+LEYP LK+RIEVL++NIR+++G DL+ L+L
Sbjct: 63  MESILEKYESYSYAERQLVATNSESQTNWNLEYPKLKARIEVLQRNIRHYVGEDLDTLTL 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTL--- 117
           RELQ +EQQIDT+LKR+R++KNQL HESISDLQK+++ LQ+QNN LAKK+KE E+TL   
Sbjct: 123 RELQSVEQQIDTALKRIRSKKNQLVHESISDLQKKQKLLQEQNNQLAKKIKENEKTLAER 182

Query: 118 TEQQNQMAQNSSPLM----------------PTFPSLTIGGNIQV--MMRGSVIDEPDEN 159
            EQQNQ  Q+SS L+                P F SLTIGG  Q      G     P  N
Sbjct: 183 AEQQNQGGQSSSTLVLPQLPPQPPQPPRPRPPPFHSLTIGGPFQARGTGDGGAQSHPPSN 242

Query: 160 QTRQNMRSTVVPWWMHDHVN 179
                   T++P WM  H N
Sbjct: 243 --------TLMPPWMLRHGN 254

Source: Vaccinium myrtillus

Species: Vaccinium myrtillus

Genus: Vaccinium

Family: Ericaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120672|ref|XP_002330923.1| predicted protein [Populus trichocarpa] gi|222873117|gb|EEF10248.1| predicted protein [Populus trichocarpa]

 Score =  175 bits (443), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 97/196 (49%), Positives = 135/196 (68%), Gaps = 23/196 (11%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           ME ILERYER +Y EQQ V +  E QG W LE+P L++R+E+L++N+RN+ G DL+PLS 
Sbjct: 63  MESILERYERCSYAEQQFVPHGPEHQGSWFLEHPKLRARVELLQRNLRNYTGQDLDPLSY 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTLTEQ 120
           +ELQ+LEQ+IDT+LK +R+RKNQL HES++++QK+E+ALQDQNN+L +++K+K + LTEQ
Sbjct: 123 KELQHLEQKIDTALKSVRSRKNQLVHESLAEMQKKEKALQDQNNILVEQVKKKLKALTEQ 182

Query: 121 ----QNQMAQNSS---------PLMPTF---PSLTIGGNIQVMMRGSVIDEPD-ENQTRQ 163
               Q  + QNSS         PL P+    P  TIGG+ Q+  RG +    D E QT  
Sbjct: 183 AQWEQQNLGQNSSSFMLPQAQPPLQPSMLSHPPPTIGGSFQI--RGFLNGNKDVEVQT-- 238

Query: 164 NMRSTVVPWWMHDHVN 179
             + + +P WM  HVN
Sbjct: 239 --QPSTMPHWMLRHVN 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148540534|gb|ABQ85945.1| MADS-box transcription factor FUL-like 2 [Trochodendron aralioides]

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/184 (52%), Positives = 128/184 (69%), Gaps = 9/184 (4%)

Query: 1   MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
           MERILERYER +Y E++LV  DAE QG WSLEY  LK+R EVL++N R+F+G DL  LSL
Sbjct: 63  MERILERYERYSYAERELVAIDAESQGSWSLEYTKLKARFEVLQRNQRHFLGEDLGSLSL 122

Query: 61  RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEK----ERT 116
           RELQ  EQQ+D++LK +R+RK+QL +ESIS+LQ++E+ALQ QNN+LA+KLKEK    ++ 
Sbjct: 123 RELQNFEQQLDSALKLIRSRKSQLMYESISELQRKEKALQQQNNLLAEKLKEKKALAQQA 182

Query: 117 LTEQQNQMAQNSSPLMP-TFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTVVPWWMH 175
             EQ NQ+   S+ L+P + PSL I G  Q    G      DE     N  +T++P WM 
Sbjct: 183 HWEQGNQVQNPSTFLLPQSLPSLNISGTYQARGTGG----EDEGSQPHNRTNTLMPPWML 238

Query: 176 DHVN 179
            H+N
Sbjct: 239 RHMN 242

Source: Trochodendron aralioides

Species: Trochodendron aralioides

Genus: Trochodendron

Family: Trochodendraceae

Order: Trochodendrales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
UNIPROTKB|D2T2G0	238	gsqua2 "GSQUA2 protein" [Gerbe	0.933	0.710	0.437	1.1e-32
TAIR|locus:2033273	256	AP1 "AT1G69120" [Arabidopsis t	0.734	0.519	0.492	1.8e-30
TAIR|locus:2173522	242	AGL8 "AGAMOUS-like 8" [Arabido	0.745	0.557	0.507	1.3e-29
TAIR|locus:2028830	255	CAL "CAULIFLOWER" [Arabidopsis	0.906	0.643	0.405	3.1e-28
UNIPROTKB|Q9ZS25	210	gsqua1 "MADS-box protein, GSQU	0.779	0.671	0.432	1.2e-26
UNIPROTKB|Q10CQ1	246	MADS14 "MADS-box transcription	0.966	0.711	0.379	3.2e-26
UNIPROTKB|Q6Q9I2	267	MADS15 "MADS-box transcription	0.585	0.397	0.509	2e-24
UNIPROTKB|Q0D4T4	249	MADS18 "MADS-box transcription	0.955	0.694	0.366	7.8e-23
TAIR|locus:2102871	249	AGL79 "AGAMOUS-like 79" [Arabi	0.585	0.425	0.462	4.4e-20
UNIPROTKB|Q7XUN2	249	MADS17 "MADS-box transcription	0.574	0.417	0.376	2.5e-16

UNIPROTKB|D2T2G0 gsqua2 "GSQUA2 protein" [Gerbera hybrid cultivar (taxid:18101)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 80/183 (43%), Positives = 115/183 (62%)

Query:     1 MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
             M+ ILERYER +Y E+ L   + E QG W+LE   L+++IEVLEKNI++++G DLEPL+L
Sbjct:    63 MDAILERYERYSYAEKLLTAPETETQGSWTLESSKLRAKIEVLEKNIKHYVGEDLEPLNL 122

Query:    61 RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAXXXXXXXXXXXXQ 120
             RELQ +EQQI+T+LKR+R RKNQ+ HESIS+L K+ER+LQ+QNN L+            Q
Sbjct:   123 RELQSVEQQIETALKRVRTRKNQVMHESISELHKKERSLQEQNNTLSKKLKGN------Q 176

Query:   121 QNQMAQNSSPLMPTFPSL----TIG-GNIQVMMRGSVIDEPDENQTRQNMRSTVVPWWMH 175
             +N   QN   + P  P       IG G+ +    G  + E + +     +  T++P W+ 
Sbjct:   177 KNTEQQNVGFMFPPQPHHLAHPAIGSGSFE---GGGAVREEEYSTQAHPISGTMMPPWLF 233

Query:   176 DHV 178
              H+
Sbjct:   234 HHI 236

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2033273 AP1 "AT1G69120" [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 66/134 (49%), Positives = 97/134 (72%)

Query:     1 MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
             ME+ILERYER +Y E+QL+  ++++   WS+EY  LK++IE+LE+N R+++G DL+ +S 
Sbjct:    63 MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query:    61 RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAXXXXXXXXXXXXQ 120
             +ELQ LEQQ+DT+LK +R RKNQL +ESI++LQK+E+A+Q+QN+ML+            Q
Sbjct:   123 KELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQ 182

Query:   121 QNQM-AQNSSPLMP 133
             Q Q   QN    MP
Sbjct:   183 QEQWDQQNQGHNMP 196

GO:0003677 "DNA binding" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0009933 "meristem structural organization" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IGI;IDA

GO:0009908 "flower development" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0010076 "maintenance of floral meristem identity" evidence=IGI

GO:0010582 "floral meristem determinacy" evidence=IGI

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009556 "microsporogenesis" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0009886 "post-embryonic morphogenesis" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0010093 "specification of floral organ identity" evidence=RCA

GO:0048440 "carpel development" evidence=RCA

GO:0048441 "petal development" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

GO:0048507 "meristem development" evidence=RCA

GO:0052543 "callose deposition in cell wall" evidence=RCA

TAIR|locus:2173522 AGL8 "AGAMOUS-like 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 70/138 (50%), Positives = 91/138 (65%)

Query:     1 MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
             MERILERY+R  Y ++QLV  D      W LE+  LK+R+EVLEKN RNFMG DL+ LSL
Sbjct:    63 MERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSL 122

Query:    61 RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAXXXXXXXXXXXXQ 120
             +ELQ LE Q+D ++K +R+RKNQ   ESIS LQK+++ALQD NN L             Q
Sbjct:   123 KELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTGQQ 182

Query:   121 QNQMAQ---NSSPLMPTF 135
             + Q+ Q   +SS L+P +
Sbjct:   183 EGQLVQCSNSSSVLLPQY 200

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0009911 "positive regulation of flower development" evidence=TAS

GO:0010077 "maintenance of inflorescence meristem identity" evidence=IGI

GO:0031540 "regulation of anthocyanin biosynthetic process" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

GO:0010154 "fruit development" evidence=IMP

TAIR|locus:2028830 CAL "CAULIFLOWER" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 71/175 (40%), Positives = 110/175 (62%)

Query:     1 MERILERYERNAYVEQQLVTNDAEL--QGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPL 58
             ME++LERYER +Y E+QL+  D+ +  Q  WS+EY  LK++IE+LE+N R+++G +LEP+
Sbjct:    63 MEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPM 122

Query:    59 SLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAXXXXXXXXXXX 118
             SL++LQ LEQQ++T+LK +R+RKNQL +ES++ LQ++E+ +Q++N+ML            
Sbjct:   123 SLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILR 182

Query:   119 XQQNQMAQ-NSS----PLMPTF--PSL-TIGGNIQVMMR-GSVIDEPDENQTRQN 164
              +Q Q  Q N S    P    F  P L  I       +  G +  E D+   R+N
Sbjct:   183 TKQTQCEQLNRSVDDVPQPQPFQHPHLYMIAHQTSPFLNMGGLYQEEDQTAMRRN 237

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;TAS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0009911 "positive regulation of flower development" evidence=TAS

GO:0010582 "floral meristem determinacy" evidence=IEP

GO:0010048 "vernalization response" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048440 "carpel development" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

UNIPROTKB|Q9ZS25 gsqua1 "MADS-box protein, GSQUA1" [Gerbera hybrid cultivar (taxid:18101)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 64/148 (43%), Positives = 97/148 (65%)

Query:     1 MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
             ME IL+RYE+ + +++Q V  D +    W+ E   LKSR E+L++N+R++MG D+E L L
Sbjct:    63 MENILDRYEQYSNIDRQHVAVDTDSPIRWTQECNKLKSRAELLQRNLRHYMGEDIESLGL 122

Query:    61 RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAXXXXXXXXXXXX- 119
             RE+Q LEQQ+DT+LKR+ ++KNQL H+SIS+LQK+E+A+Q+QNN L              
Sbjct:   123 REIQNLEQQLDTALKRIHSKKNQLLHQSISELQKKEKAIQEQNNTLIKNIKEKEKTITQK 182

Query:   120 ---QQNQMAQNSSPLMPTFP---SLTIG 141
                + +    N++PL+ + P   SL IG
Sbjct:   183 AQWEPHNYGPNTTPLLFSLPPHSSLNIG 210

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q10CQ1 MADS14 "MADS-box transcription factor 14" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 71/187 (37%), Positives = 112/187 (59%)

Query:     1 MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
             M++ILERYER +Y E+ L++ +++ QG W  EY  LK+++E ++K  ++ MG DLE L+L
Sbjct:    63 MDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNL 122

Query:    61 RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAXXXXXXXXXXXXQ 120
             +ELQ LEQQ++ SLK +R+RK+QL  ESI++LQ++E++LQ++N +L             Q
Sbjct:   123 KELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQ 182

Query:   121 ------QNQMAQNSSPLM--PTFPSLTIGGNIQVMMRGSVIDEPDENQTRQNMRSTVVPW 172
                   Q Q + +SS  M     P+  I  N      G  I++    Q  Q++R  + PW
Sbjct:   183 VQWDQTQPQTSSSSSSFMMREALPTTNIS-NYPAAA-GERIEDVAAGQP-QHVRIGLPPW 239

Query:   173 WMHDHVN 179
              M  H+N
Sbjct:   240 -MLSHIN 245

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q6Q9I2 MADS15 "MADS-box transcription factor 15" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 54/106 (50%), Positives = 82/106 (77%)

Query:     1 MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
             M++ILERYER +Y E+ L++ ++E +G W  EY  LK++IE ++K  ++ MG DLE L+L
Sbjct:    63 MDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNL 122

Query:    61 RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNML 106
             +ELQ LEQQ+++SLK + +RK+ L  ESIS+LQK+ER+LQ++N  L
Sbjct:   123 KELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKAL 168

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q0D4T4 MADS18 "MADS-box transcription factor 18" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 67/183 (36%), Positives = 102/183 (55%)

Query:     1 MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
             ME ILERY+R ++ E+ ++  + E Q  W  EY  LKS+++ L+K+ R  +G  L+ L++
Sbjct:    63 MEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTI 122

Query:    61 RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAXXXXXXXXXXXX- 119
             +ELQ LE Q++ SLK +R++KNQL  ESIS+LQK+E++L++QNN+L              
Sbjct:   123 KELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQKLMETEKEKNNAI 182

Query:   120 -QQNQMAQN------SSPLMPTFPS-LTIGGNIQVMMRGSVIDEPDENQTRQNMRSTVVP 171
                N+  QN      SSP   T P  +    N Q   RGS   E   +  +    S + P
Sbjct:   183 INTNREEQNGATPSTSSPTPVTAPDPIPTTNNSQSQPRGSGESEAQPSPAQAG-NSKLPP 241

Query:   172 WWM 174
             W +
Sbjct:   242 WML 244

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2102871 AGL79 "AGAMOUS-like 79" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 49/106 (46%), Positives = 75/106 (70%)

Query:     1 MERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSL 60
             MERIL+RYER+AY  Q + T + + QG  S E   L   I+VL++++R+  G +++ LS+
Sbjct:    63 MERILDRYERSAYAGQDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDGLSI 122

Query:    61 RELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNML 106
             R+LQ +E Q+DT+LK+ R+RKNQL  ESI+ LQK+E+ L++    L
Sbjct:   123 RDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQL 168

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0046983 "protein dimerization activity" evidence=IEA

GO:0048481 "ovule development" evidence=RCA

UNIPROTKB|Q7XUN2 MADS17 "MADS-box transcription factor 17" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 182 (69.1 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
 Identities = 41/109 (37%), Positives = 65/109 (59%)

Query:     1 MERILERYERNAYVEQQLVTNDAELQG---CWSLEYPNLKSRIEVLEKNIRNFMGGDLEP 57
             + + LE+Y    Y  Q   +N A   G    W  E   LK+++E L+++ R+ +G DL P
Sbjct:    62 INKTLEKYNSCCYNAQG--SNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGP 119

Query:    58 LSLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNML 106
             LS++ELQ LE+Q++ SL + R RK Q+  E + DL+++ER L + N  L
Sbjct:   120 LSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQL 168

GO:0010093 "specification of floral organ identity" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_1550090 hypothetical protein (255 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	181
pfam01486	100	pfam01486, K-box, K-box region	5e-27
PRK12704	520	PRK12704, PRK12704, phosphodiesterase; Provisional	7e-04

>gnl|CDD|216525 pfam01486, K-box, K-box region

 Score = 97.6 bits (244), Expect = 5e-27
 Identities = 40/100 (40%), Positives = 58/100 (58%)

Query: 13  YVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLEQQIDT 72
           Y +                E   LK + E L++  R+ +G DL  LSL+ELQ LEQQ++ 
Sbjct: 1   YQKLSGNDLWESKYENLQQEAAKLKKQNENLQREQRHLLGEDLGSLSLKELQQLEQQLEN 60

Query: 73  SLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKE 112
            LK +R+RKN+L    I +LQK+ER LQ++N  L +KL+E
Sbjct: 61  GLKHIRSRKNELLLNQIEELQKKERELQEENRNLRQKLEE 100

The K-box region is commonly found associated with SRF-type transcription factors see pfam00319. The K-box is a possible coiled-coil structure. Possible role in multimer formation. Length = 100

>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional

 Score = 39.0 bits (92), Expect = 7e-04
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 33/130 (25%)

Query: 2   ERILERYERNAYVEQQLVTNDAELQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLR 61
           +RILE  ++ A   ++    +A L+     E   L++  E  E   R             
Sbjct: 41  KRILEEAKKEAEAIKK----EALLEA--KEEIHKLRNEFE-KELRERR-----------N 82

Query: 62  ELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLK-------EKE 114
           ELQ LE       KRL  ++  L  +    L+KRE  L+ +   L +K +       E E
Sbjct: 83  ELQKLE-------KRLLQKEENLDRKL-ELLEKREEELEKKEKELEQKQQELEKKEEELE 134

Query: 115 RTLTEQQNQM 124
             + EQ  ++
Sbjct: 135 ELIEEQLQEL 144

Length = 520

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	181
PF01486	100	K-box: K-box region; InterPro: IPR002487 MADS gene	99.91
KOG0014	195	consensus MADS box transcription factor [Transcrip	97.62
PF06005	72	DUF904: Protein of unknown function (DUF904); Inte	95.4
COG3074	79	Uncharacterized protein conserved in bacteria [Fun	92.36
PRK15422	79	septal ring assembly protein ZapB; Provisional	91.55
cd07429	108	Cby_like Chibby, a nuclear inhibitor of Wnt/beta-c	87.08
PF06698	59	DUF1192: Protein of unknown function (DUF1192); In	85.69
PF08317	325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	84.19
PF01166	59	TSC22: TSC-22/dip/bun family; InterPro: IPR000580	82.59
smart00787	312	Spc7 Spc7 kinetochore protein. This domain is foun	82.51
COG2433	652	Uncharacterized conserved protein [Function unknow	81.14

>PF01486 K-box: K-box region; InterPro: IPR002487 MADS genes in plants encode key developmental regulators of vegetative and reproductive development

Probab=99.91  E-value=5.3e-24  Score=157.22  Aligned_cols=88  Identities=47%  Similarity=0.708  Sum_probs=85.0

Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030228           25 LQGCWSLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNN  104 (181)
Q Consensus        25 ~~~~~~~E~~kLk~~ie~Lq~~~R~l~GEdL~~Ls~kELq~LE~qLe~aL~~IRsrK~qlm~e~I~~LqkKe~~L~EeN~  104 (181)
                      ..+.|..|+++|+.+++.|+..+|||+||||++||++||++||++|+.||++||+||+++|+++|..|++|++.|.++|.
T Consensus        13 ~~e~~~~e~~~L~~~~~~L~~~~R~~~GedL~~Ls~~eL~~LE~~Le~aL~~VR~rK~~~l~~~i~~l~~ke~~l~~en~   92 (100)
T PF01486_consen   13 QHEELQQEIAKLRKENESLQKELRHLMGEDLESLSLKELQQLEQQLESALKRVRSRKDQLLMEQIEELKKKERELEEENN   92 (100)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 030228          105 MLAKKLKE  112 (181)
Q Consensus       105 ~L~~kl~e  112 (181)
                      .|+.++.|
T Consensus        93 ~L~~~~~e  100 (100)
T PF01486_consen   93 QLRQKIEE  100 (100)
T ss_pred             HHHHHhcC
Confidence            99999864

The majority of the plant MADS proteins share a stereotypical MIKC structure. It comprises (from N- to C-terminal) an N-terminal domain, which is, however, present only in a minority of proteins; a MADS domain (see PDOC00302 from PROSITEDOC, IPR002100 from INTERPRO), which is the major determinant of DNA-binding but which also performs dimerisation and accessory factor binding functions; a weakly conserved intervening (I) domain, which constitutes a key molecular determinant for the selective formation of DNA-binding dimers; a keratin-like (K-box) domain, which promotes protein dimerisation; and a C-terminal (C) domain, which is involved in transcriptional activation or in the formation of ternary or quaternary protein complexes. The 80-amino acid K-box domain was originally identified as a region with low but significant similarity to a region of keratin, which is part of the coiled-coil sequence constituting the central rod-shaped domain of keratin [, , ]. The K-box protein-protein interaction domain which mediates heterodimerization of MIKC-type MADS proteins contains several heptad repeats in which the first and the fourth positions are occupied by hydrophobic amino acids suggesting that the K-box domain forms three amphipathic alpha-helices referred to as K1, K2, and K3 [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG0014 consensus MADS box transcription factor [Transcription]

Probab=97.62  E-value=1.4e-05  Score=64.37  Aligned_cols=74  Identities=34%  Similarity=0.364  Sum_probs=61.8

Q ss_pred             hhhhHHHHHHHHHHHHHH---hhhhcCCCCCCCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 030228           29 WSLEYPNLKSRIEVLEKN---IRNFMGGDLEPLSL-RELQYLEQQIDTSLKRLRNRKNQLTHESIS-DLQKRERALQDQ  102 (181)
Q Consensus        29 ~~~E~~kLk~~ie~Lq~~---~R~l~GEdL~~Ls~-kELq~LE~qLe~aL~~IRsrK~qlm~e~I~-~LqkKe~~L~Ee  102 (181)
                      +..+...++..++.|+..   +|+++|++|.++++ .+|..+|.+|+.++..+|..+...+.+++. .++.++..+...
T Consensus       112 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~l~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (195)
T KOG0014|consen  112 KKSLESSLKVDPEDLELLELEQRKLTGEDLQSLSSLNELNSLESQLESSLHNSRSSKSKPLSDSNFQVLQEKEKSLEAE  190 (195)
T ss_pred             hhhhhhhhhcchhhhhhhHHHHHHHhccccccCCHHHHhcchhhHHHHhhcCCCCCCCcCCcchhhhhhcccchhcccc
Confidence            456667777778877754   99999999999999 999999999999999999999999998887 666666555443

>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation

Probab=95.40  E-value=0.28  Score=34.30  Aligned_cols=52  Identities=19%  Similarity=0.359  Sum_probs=39.8

Q ss_pred             CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030228           58 LSLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKE  114 (181)
Q Consensus        58 Ls~kELq~LE~qLe~aL~~IRsrK~qlm~e~I~~LqkKe~~L~EeN~~L~~kl~e~~  114 (181)
                      +|+.-|.+||.++..|+..|..     +..++.+|+.+-..|.++|..|........
T Consensus         1 M~~E~l~~LE~ki~~aveti~~-----Lq~e~eeLke~n~~L~~e~~~L~~en~~L~   52 (72)
T PF06005_consen    1 MSLELLEQLEEKIQQAVETIAL-----LQMENEELKEKNNELKEENEELKEENEQLK   52 (72)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            5788999999999999999854     455778888887777788887777665543

It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.; GO: 0000917 barrier septum formation, 0043093 cytokinesis by binary fission, 0005737 cytoplasm; PDB: 2JEE_A.

>COG3074 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.36  E-value=2.7  Score=29.46  Aligned_cols=52  Identities=17%  Similarity=0.348  Sum_probs=40.0

Q ss_pred             CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030228           58 LSLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKE  114 (181)
Q Consensus        58 Ls~kELq~LE~qLe~aL~~IRsrK~qlm~e~I~~LqkKe~~L~EeN~~L~~kl~e~~  114 (181)
                      +|+.=|.+||..+..|+.-|     .|+.-+|++|+.|-..|..+-..++.......
T Consensus         1 MSlEv~ekLE~KiqqAvdTI-----~LLQmEieELKEknn~l~~e~q~~q~~reaL~   52 (79)
T COG3074           1 MSLEVFEKLEAKVQQAIDTI-----TLLQMEIEELKEKNNSLSQEVQNAQHQREALE   52 (79)
T ss_pred             CchHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHH
Confidence            57788999999999999877     57778889988888777766666655555443

>PRK15422 septal ring assembly protein ZapB; Provisional

Probab=91.55  E-value=3.2  Score=29.60  Aligned_cols=45  Identities=18%  Similarity=0.382  Sum_probs=35.0

Q ss_pred             CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030228           58 LSLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLA  107 (181)
Q Consensus        58 Ls~kELq~LE~qLe~aL~~IRsrK~qlm~e~I~~LqkKe~~L~EeN~~L~  107 (181)
                      +|+.=|.+||..+..|+.-|     .++.-+|++|+.|-..|.+++..++
T Consensus         1 MS~EvleqLE~KIqqAvdtI-----~LLqmEieELKekn~~L~~e~~~~~   45 (79)
T PRK15422          1 MSLEVFEKLEAKVQQAIDTI-----TLLQMEIEELKEKNNSLSQEVQNAQ   45 (79)
T ss_pred             CcHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57788999999999999887     4666778888887777777666543

>cd07429 Cby_like Chibby, a nuclear inhibitor of Wnt/beta-catenin mediated transcription, and similar proteins

Probab=87.08  E-value=1.1  Score=33.73  Aligned_cols=27  Identities=26%  Similarity=0.496  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030228           87 ESISDLQKRERALQDQNNMLAKKLKEK  113 (181)
Q Consensus        87 e~I~~LqkKe~~L~EeN~~L~~kl~e~  113 (181)
                      .++..|++|.+.|+|||+.|+-|++-.
T Consensus        72 ~e~~rlkkk~~~LeEENNlLklKievL   98 (108)
T cd07429          72 REVLRLKKKNQQLEEENNLLKLKIEVL   98 (108)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345567888999999999999998643

Chibby(Cby) is a well-conserved nuclear protein that functions as part of the Wnt/beta-catenin signaling pathway. Specifically, Cby binds directly to beta-catenin by interacting with its central region, which harbors armadillo repeats. Cby-beta-catenin interactions may also involve 14-3-3 proteins. By competing with other binding partners of beta-catenin, the Tcf/Lef transcription factors, Cby inhibits transcriptional activation. Cby has been shown to play a role in adipocyte differentiation. The C-terminal region of Cby appears to contain an alpha-helical coiled-coil motif.

>PF06698 DUF1192: Protein of unknown function (DUF1192); InterPro: IPR009579 This family consists of several short, hypothetical, bacterial proteins of around 60 residues in length

Probab=85.69  E-value=1.4  Score=29.66  Aligned_cols=30  Identities=30%  Similarity=0.427  Sum_probs=21.3

Q ss_pred             hhcCCCCCCCCHHHHHHHHHHHHHHhHHHH
Q 030228           49 NFMGGDLEPLSLRELQYLEQQIDTSLKRLR   78 (181)
Q Consensus        49 ~l~GEdL~~Ls~kELq~LE~qLe~aL~~IR   78 (181)
                      |..|+||+.||+.||..==..|+.=+.++|
T Consensus        12 ~~ig~dLs~lSv~EL~~RIa~L~aEI~R~~   41 (59)
T PF06698_consen   12 HEIGEDLSLLSVEELEERIALLEAEIARLE   41 (59)
T ss_pred             cccCCCchhcCHHHHHHHHHHHHHHHHHHH
Confidence            688999999999999864444444444443

The function of this family is unknown.

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []

Probab=84.19  E-value=28  Score=30.51  Aligned_cols=64  Identities=22%  Similarity=0.431  Sum_probs=50.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 030228           54 DLEPLSLRELQYLEQQIDTSLKRLRNRKNQLT--HESISDLQKRERALQDQNNMLAKKLKEKERTL  117 (181)
Q Consensus        54 dL~~Ls~kELq~LE~qLe~aL~~IRsrK~qlm--~e~I~~LqkKe~~L~EeN~~L~~kl~e~~~~~  117 (181)
                      +++.+...+|..|-..|...=..|..+|..+-  ..++..++.+...+.++...+...|.+.++..
T Consensus       202 e~~~~D~~eL~~lr~eL~~~~~~i~~~k~~l~el~~el~~l~~~i~~~~~~k~~l~~eI~e~~~~~  267 (325)
T PF08317_consen  202 EIESCDQEELEALRQELAEQKEEIEAKKKELAELQEELEELEEKIEELEEQKQELLAEIAEAEKIR  267 (325)
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            48889999999999999998888887777653  56777777777777777777777777765544

>PF01166 TSC22: TSC-22/dip/bun family; InterPro: IPR000580 Several eukaryotic proteins are evolutionary related and are thought to be involved in transcriptional regulation

Probab=82.59  E-value=3.5  Score=27.81  Aligned_cols=27  Identities=30%  Similarity=0.653  Sum_probs=16.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030228           83 QLTHESISDLQKRERALQDQNNMLAKK  109 (181)
Q Consensus        83 qlm~e~I~~LqkKe~~L~EeN~~L~~k  109 (181)
                      +.+.++|.+|..+...|+.+|..|+..
T Consensus        17 evLK~~I~eL~~~n~~Le~EN~~Lk~~   43 (59)
T PF01166_consen   17 EVLKEQIAELEERNSQLEEENNLLKQN   43 (59)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            455566666666666666666666543

These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Proteins containing this signature include: Vertebrate protein TSC-22 [], a transcriptional regulator which seems to act on C-type natriuretic peptide (CNP) promoter. Mammalian protein DIP (DSIP-immunoreactive peptide) [], a protein whose function is not yet known. Drosophila protein bunched [] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis. Caenorhabditis elegans hypothetical protein T18D3.7. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 1DIP_B.

>smart00787 Spc7 Spc7 kinetochore protein

Probab=82.51  E-value=22  Score=31.31  Aligned_cols=86  Identities=22%  Similarity=0.425  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHhhhhcC--CCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Q 030228           33 YPNLKSRIEVLEKNIRNFMG--GDLEPLSLRELQYLEQQIDTSLKRLRNRKNQLT--HESISDLQKRERALQDQNNMLAK  108 (181)
Q Consensus        33 ~~kLk~~ie~Lq~~~R~l~G--EdL~~Ls~kELq~LE~qLe~aL~~IRsrK~qlm--~e~I~~LqkKe~~L~EeN~~L~~  108 (181)
                      +..|+.+...|+...+++.-  ++++.+...||..+-..|..-...|..++.++.  .+++..+..+.....+.-..+..
T Consensus       174 ~~~l~~~~~~L~~e~~~L~~~~~e~~~~d~~eL~~lk~~l~~~~~ei~~~~~~l~e~~~~l~~l~~~I~~~~~~k~e~~~  253 (312)
T smart00787      174 KPKLRDRKDALEEELRQLKQLEDELEDCDPTELDRAKEKLKKLLQEIMIKVKKLEELEEELQELESKIEDLTNKKSELNT  253 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444455555555555433  577889999999999999998888877776643  46666666676777777777777


Q ss_pred             HHHHHHHhHH
Q 030228          109 KLKEKERTLT  118 (181)
Q Consensus       109 kl~e~~~~~~  118 (181)
                      .|.+.++...
T Consensus       254 ~I~~ae~~~~  263 (312)
T smart00787      254 EIAEAEKKLE  263 (312)
T ss_pred             HHHHHHHHHH
Confidence            7777665544

This domain is found in cell division proteins which are required for kinetochore-spindle association.

>COG2433 Uncharacterized conserved protein [Function unknown]

Probab=81.14  E-value=24  Score=34.16  Aligned_cols=84  Identities=24%  Similarity=0.353  Sum_probs=54.1

Q ss_pred             hhhHHHHHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030228           30 SLEYPNLKSRIEVLEKNIRNFMGGDLEPLSLRELQYLEQQIDTSLKRLR-----NRKNQLTHESISDLQKRERALQDQNN  104 (181)
Q Consensus        30 ~~E~~kLk~~ie~Lq~~~R~l~GEdL~~Ls~kELq~LE~qLe~aL~~IR-----srK~qlm~e~I~~LqkKe~~L~EeN~  104 (181)
                      ..++.++...++.|+...++|-.+ ++.|- +++..||.+|+..-.+++     .|+-+.+...|..|.++...-...-.
T Consensus       421 ~~~i~~~~~~ve~l~~e~~~L~~~-~ee~k-~eie~L~~~l~~~~r~~~~~~~~~rei~~~~~~I~~L~~~L~e~~~~ve  498 (652)
T COG2433         421 EKRIKKLEETVERLEEENSELKRE-LEELK-REIEKLESELERFRREVRDKVRKDREIRARDRRIERLEKELEEKKKRVE  498 (652)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555555555555555554432 11111 788999999999888877     45566677788888887666666666


Q ss_pred             HHHHHHHHHHH
Q 030228          105 MLAKKLKEKER  115 (181)
Q Consensus       105 ~L~~kl~e~~~  115 (181)
                      .|..++.+..+
T Consensus       499 ~L~~~l~~l~k  509 (652)
T COG2433         499 ELERKLAELRK  509 (652)
T ss_pred             HHHHHHHHHHH
Confidence            77777776653

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	181
2jee_A	81	YIIU; FTSZ, septum, coiled-coil, cell division, ce	95.0
2dgc_A	63	Protein (GCN4); basic domain, leucine zipper, DNA	81.14
1ci6_A	63	Transcription factor ATF-4; BZIP; 2.60A {Homo sapi	80.08

>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}

Probab=95.00  E-value=0.36  Score=33.57  Aligned_cols=47  Identities=17%  Similarity=0.381  Sum_probs=39.3

Q ss_pred             CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030228           58 LSLRELQYLEQQIDTSLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKK  109 (181)
Q Consensus        58 Ls~kELq~LE~qLe~aL~~IRsrK~qlm~e~I~~LqkKe~~L~EeN~~L~~k  109 (181)
                      +|++=|.+||..++.|+..|     .+|..+|++|+.|-..|..+|..++..
T Consensus         3 MS~ElleqLE~KIq~avdtI-----~lLqmEieELKekN~~L~~e~~e~~~~   49 (81)
T 2jee_A            3 MSLEVFEKLEAKVQQAIDTI-----TLLQMEIEELKEKNNSLSQEVQNAQHQ   49 (81)
T ss_dssp             CCHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            68888999999999999877     567778899998888888888876553

>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D

Probab=81.14  E-value=6  Score=25.76  Aligned_cols=39  Identities=23%  Similarity=0.369  Sum_probs=31.0

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 030228           73 SLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKER  115 (181)
Q Consensus        73 aL~~IRsrK~qlm~e~I~~LqkKe~~L~EeN~~L~~kl~e~~~  115 (181)
                      |-.+.|.||.+    .+.+|..+...|..+|..|..++.....
T Consensus        20 AArrsR~RK~~----~~~~Le~~v~~L~~eN~~L~~ev~~Lr~   58 (63)
T 2dgc_A           20 AARRSRARKLQ----RMKQLEDKVEELLSKNYHLENEVARLKK   58 (63)
T ss_dssp             HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55677888864    5678999999999999999998876543

>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1

Probab=80.08  E-value=9.7  Score=24.64  Aligned_cols=41  Identities=17%  Similarity=0.323  Sum_probs=31.7

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 030228           73 SLKRLRNRKNQLTHESISDLQKRERALQDQNNMLAKKLKEKERTL  117 (181)
Q Consensus        73 aL~~IRsrK~qlm~e~I~~LqkKe~~L~EeN~~L~~kl~e~~~~~  117 (181)
                      |-.+-|.+|.    +.+.+|..+...|..+|..|..+|.......
T Consensus        13 AA~R~R~KKk----~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~   53 (63)
T 1ci6_A           13 AATRYRQKKR----AEQEALTGECKELEKKNEALKERADSLAKEI   53 (63)
T ss_dssp             HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5566666665    4567889999999999999999998776544

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00