Citrus Sinensis ID: 030240
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 181 | ||||||
| 255548730 | 181 | Early nodulin 55-2 precursor, putative [ | 0.977 | 0.977 | 0.642 | 3e-63 | |
| 115393868 | 175 | phytocyanin-like arabinogalactan-protein | 0.922 | 0.954 | 0.656 | 5e-62 | |
| 224089370 | 179 | predicted protein [Populus trichocarpa] | 0.950 | 0.960 | 0.649 | 1e-61 | |
| 225430494 | 178 | PREDICTED: early nodulin-like protein 1 | 0.972 | 0.988 | 0.620 | 2e-58 | |
| 224091773 | 178 | predicted protein [Populus trichocarpa] | 0.977 | 0.994 | 0.615 | 5e-57 | |
| 351721609 | 178 | uncharacterized protein LOC100305551 pre | 0.850 | 0.865 | 0.649 | 3e-56 | |
| 224141973 | 214 | predicted protein [Populus trichocarpa] | 0.889 | 0.752 | 0.652 | 5e-56 | |
| 351724039 | 175 | uncharacterized protein LOC100527928 pre | 0.850 | 0.88 | 0.654 | 1e-54 | |
| 357466009 | 180 | Early nodulin-like protein [Medicago tru | 0.850 | 0.855 | 0.638 | 6e-54 | |
| 388518493 | 174 | unknown [Lotus japonicus] | 0.845 | 0.879 | 0.645 | 9e-53 |
| >gi|255548730|ref|XP_002515421.1| Early nodulin 55-2 precursor, putative [Ricinus communis] gi|223545365|gb|EEF46870.1| Early nodulin 55-2 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/182 (64%), Positives = 150/182 (82%), Gaps = 5/182 (2%)
Query: 3 GFSRTLASSSLVLTSLVLFSISFCEARDILVGGKTDSWKIPSSQSDSLNQWAEKTRFQVG 62
SR SS L++ +L LFS+S +A+DIL+GGKTD+WK+PSSQSDSLN+WAE +RF++G
Sbjct: 2 AMSRFQRSSLLLMITLQLFSLS--DAKDILIGGKTDAWKVPSSQSDSLNKWAESSRFRIG 59
Query: 63 DSLVWKYDATRDSVLQVTKEAYLSCNTSSPVAEYRDGNTKVKLNKSGPFYFISGTKGSCE 122
DSLVWKYD+ +DSVL+VT+ AYLSCN S+PV EY+DGNTKVKL ++GP+YFISG +G CE
Sbjct: 60 DSLVWKYDSQKDSVLEVTRAAYLSCNVSNPVEEYKDGNTKVKLERAGPYYFISGAEGHCE 119
Query: 123 KGQKLIVVVMSSRR-RYTGISPAPAPMEFDGPAVAPTSSAAS--FKASLVLALGGLLAWV 179
KGQK+IVVV+S R R+ GISPAP+P EF+GPA+APTS+A S FK S ++A G+L W
Sbjct: 120 KGQKMIVVVLSPRHNRFIGISPAPSPAEFEGPAIAPTSTATSLKFKGSFLVAPLGILLWA 179
Query: 180 LF 181
LF
Sbjct: 180 LF 181
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115393868|gb|ABI96983.1| phytocyanin-like arabinogalactan-protein [Gossypium hirsutum] gi|115393870|gb|ABI96984.1| phytocyanin-like arabinogalactan-protein [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
| >gi|224089370|ref|XP_002308708.1| predicted protein [Populus trichocarpa] gi|118484663|gb|ABK94202.1| unknown [Populus trichocarpa] gi|222854684|gb|EEE92231.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225430494|ref|XP_002285538.1| PREDICTED: early nodulin-like protein 1 [Vitis vinifera] gi|296082140|emb|CBI21145.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224091773|ref|XP_002309349.1| predicted protein [Populus trichocarpa] gi|118482723|gb|ABK93280.1| unknown [Populus trichocarpa] gi|222855325|gb|EEE92872.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|351721609|ref|NP_001236959.1| uncharacterized protein LOC100305551 precursor [Glycine max] gi|255625883|gb|ACU13286.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224141973|ref|XP_002324335.1| predicted protein [Populus trichocarpa] gi|222865769|gb|EEF02900.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|351724039|ref|NP_001235764.1| uncharacterized protein LOC100527928 precursor [Glycine max] gi|255633594|gb|ACU17156.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357466009|ref|XP_003603289.1| Early nodulin-like protein [Medicago truncatula] gi|355492337|gb|AES73540.1| Early nodulin-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|388518493|gb|AFK47308.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 181 | ||||||
| TAIR|locus:2116767 | 177 | ENODL15 "early nodulin-like pr | 0.734 | 0.751 | 0.622 | 5.7e-43 | |
| TAIR|locus:2179240 | 186 | ENODL13 "early nodulin-like pr | 0.751 | 0.731 | 0.580 | 5.2e-42 | |
| TAIR|locus:2040164 | 182 | ENODL14 "early nodulin-like pr | 0.751 | 0.747 | 0.589 | 4.6e-41 | |
| TAIR|locus:2118691 | 190 | ENODL12 "early nodulin-like pr | 0.729 | 0.694 | 0.536 | 1.9e-35 | |
| TAIR|locus:2174428 | 182 | ENODL10 "early nodulin-like pr | 0.668 | 0.664 | 0.524 | 1.5e-33 | |
| TAIR|locus:2061406 | 226 | ENODL11 "early nodulin-like pr | 0.591 | 0.473 | 0.473 | 5.5e-32 | |
| TAIR|locus:2085775 | 203 | ENODL9 "early nodulin-like pro | 0.723 | 0.645 | 0.514 | 1.6e-31 | |
| TAIR|locus:2127861 | 221 | ENODL4 "early nodulin-like pro | 0.674 | 0.552 | 0.407 | 1.6e-22 | |
| TAIR|locus:4010713954 | 145 | ENODL21 "early nodulin-like pr | 0.591 | 0.737 | 0.495 | 1.6e-22 | |
| TAIR|locus:2154679 | 370 | ENODL1 "early nodulin-like pro | 0.674 | 0.329 | 0.435 | 4.3e-22 |
| TAIR|locus:2116767 ENODL15 "early nodulin-like protein 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 84/135 (62%), Positives = 107/135 (79%)
Query: 28 ARDILVGGKTDSWKIPSSQSDSLNQWAEKTRFQVGDSLVWKYDATRDSVLQVTKEAYLSC 87
A ++ VGGK+ WKIP S S S N+WA+K RF+VGD +V+KY+A +DSVLQVT+EAY C
Sbjct: 24 ANEVTVGGKSGDWKIPPSSSFSFNEWAQKARFKVGDFIVFKYEAGKDSVLQVTREAYEKC 83
Query: 88 NTSSPVAEYRDGNTKVKLNKSGPFYFISGTKGSCEKGQKLIVVVMSSRRRYTGISPAPAP 147
NT+SP A Y DGNTKVKL+++GP YF+SGT+G C+KGQKL +VV++ R + SP P+P
Sbjct: 84 NTTSPKASYTDGNTKVKLDQAGPVYFVSGTEGHCQKGQKLRLVVITPRN--SAFSPGPSP 141
Query: 148 MEFDGPAVAPTSSAA 162
EFDGPAVAPTS AA
Sbjct: 142 SEFDGPAVAPTSGAA 156
|
|
| TAIR|locus:2179240 ENODL13 "early nodulin-like protein 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040164 ENODL14 "early nodulin-like protein 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2118691 ENODL12 "early nodulin-like protein 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174428 ENODL10 "early nodulin-like protein 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2061406 ENODL11 "early nodulin-like protein 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2085775 ENODL9 "early nodulin-like protein 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2127861 ENODL4 "early nodulin-like protein 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:4010713954 ENODL21 "early nodulin-like protein 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2154679 ENODL1 "early nodulin-like protein 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| grail3.0013047901 | SubName- Full=Putative uncharacterized protein; (179 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 181 | |||
| pfam02298 | 84 | pfam02298, Cu_bind_like, Plastocyanin-like domain | 2e-35 | |
| PLN03148 | 167 | PLN03148, PLN03148, Blue copper-like protein; Prov | 1e-11 |
| >gnl|CDD|216965 pfam02298, Cu_bind_like, Plastocyanin-like domain | Back alignment and domain information |
|---|
Score = 118 bits (299), Expect = 2e-35
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 40 WKIPSSQSDSLNQWAEKTRFQVGDSLVWKYDATRDSVLQVTKEAYLSCNTSSPVAEYRDG 99
W +P + + WA F+VGD+LV+ YD +V++VTK Y SCNTS P+ Y G
Sbjct: 1 WTVPLNADYT--LWASGKTFRVGDTLVFNYDKGFHNVVEVTKADYESCNTSKPIRTYTTG 58
Query: 100 NTKVKLNKSGPFYFISGTKGSCEKGQ 125
N + L K G YFI G G C+ GQ
Sbjct: 59 NDIIPLTKPGQHYFICGVPGHCKGGQ 84
|
This family represents a domain found in flowering plants related to the copper binding protein plastocyanin. Some members of this family may not bind copper due to the lack of key residues. Length = 84 |
| >gnl|CDD|178693 PLN03148, PLN03148, Blue copper-like protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 181 | |||
| PLN03148 | 167 | Blue copper-like protein; Provisional | 100.0 | |
| PF02298 | 85 | Cu_bind_like: Plastocyanin-like domain; InterPro: | 99.97 | |
| PRK02710 | 119 | plastocyanin; Provisional | 98.91 | |
| PF00127 | 99 | Copper-bind: Copper binding proteins, plastocyanin | 98.7 | |
| TIGR02656 | 99 | cyanin_plasto plastocyanin. Members of this family | 98.67 | |
| TIGR03102 | 115 | halo_cynanin halocyanin domain. Halocyanins are bl | 98.49 | |
| COG3794 | 128 | PetE Plastocyanin [Energy production and conversio | 98.31 | |
| TIGR02375 | 116 | pseudoazurin pseudoazurin. Pseudoazurin, also call | 98.23 | |
| TIGR03095 | 148 | rusti_cyanin rusticyanin. Rusticyanin is a blue co | 97.29 | |
| TIGR02657 | 83 | amicyanin amicyanin. Members of this family are am | 97.28 | |
| PF06525 | 196 | SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Memb | 96.75 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 96.03 | |
| PF00812 | 145 | Ephrin: Ephrin; InterPro: IPR001799 Ephrins are a | 95.97 | |
| KOG3858 | 233 | consensus Ephrin, ligand for Eph receptor tyrosine | 95.86 | |
| TIGR03094 | 195 | sulfo_cyanin sulfocyanin. Members of this family a | 95.07 | |
| COG4454 | 158 | Uncharacterized copper-binding protein [Inorganic | 94.46 | |
| TIGR03096 | 135 | nitroso_cyanin nitrosocyanin. Nitrosocyanin, as de | 93.99 | |
| PRK10378 | 375 | inactive ferrous ion transporter periplasmic prote | 90.49 | |
| TIGR02695 | 125 | azurin azurin. Azurin is a blue copper-binding pro | 90.42 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 89.95 | |
| TIGR02376 | 311 | Cu_nitrite_red nitrite reductase, copper-containin | 88.52 | |
| PF07732 | 117 | Cu-oxidase_3: Multicopper oxidase; InterPro: IPR01 | 86.13 | |
| PLN02354 | 552 | copper ion binding / oxidoreductase | 85.74 | |
| PLN02604 | 566 | oxidoreductase | 82.05 |
| >PLN03148 Blue copper-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=278.66 Aligned_cols=107 Identities=32% Similarity=0.653 Sum_probs=100.1
Q ss_pred HhhhcccceEEEEeCCCCCccCCCCCCccchhcccCCceecCCEEEeeeeCCCCeEEEEccccCCCCCCCCCcccccCCC
Q 030240 21 FSISFCEARDILVGGKTDSWKIPSSQSDSLNQWAEKTRFQVGDSLVWKYDATRDSVLQVTKEAYLSCNTSSPVAEYRDGN 100 (181)
Q Consensus 21 ll~~~a~a~~~~VGg~~G~W~~~~~~~~~Y~~WA~~~~f~vGD~LvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~s~G~ 100 (181)
++...++|++|+|||+.| |+...+ |++||++++|++||+|+|+|+++.|||+||++++|++|+..+++..+++|+
T Consensus 13 ~~~~~~~a~~~~VGd~~G-W~~~~~----Y~~WA~~k~F~VGD~LvF~Y~~~~hnV~~V~~~~Y~~C~~~~pi~~~tsG~ 87 (167)
T PLN03148 13 FSASATTATDHIVGANKG-WNPGIN----YTLWANNQTFYVGDLISFRYQKTQYNVFEVNQTGYDNCTTEGAAGNWTSGK 87 (167)
T ss_pred HhhhhccceEEEeCCCCC-cCCCCC----hhHhhcCCCCccCCEEEEEecCCCceEEEEChHHcCcccCCCCcceecCCC
Confidence 455678899999999999 996554 999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecccccEEEEeCCCCCCcCCCeEEEEeec
Q 030240 101 TKVKLNKSGPFYFISGTKGSCEKGQKLIVVVMS 133 (181)
Q Consensus 101 ~~v~L~~~G~~YFic~v~~HC~~GmKl~I~V~~ 133 (181)
+.|+|+++|+|||||+ .+||++|||+.|+|.+
T Consensus 88 d~v~L~~~G~~YFIcg-~ghC~~GmKl~I~V~~ 119 (167)
T PLN03148 88 DFIPLNKAKRYYFICG-NGQCFNGMKVTILVHP 119 (167)
T ss_pred cEEEecCCccEEEEcC-CCccccCCEEEEEEcC
Confidence 9999999999999999 6999999999999964
|
|
| >PF02298 Cu_bind_like: Plastocyanin-like domain; InterPro: IPR003245 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
| >PRK02710 plastocyanin; Provisional | Back alignment and domain information |
|---|
| >PF00127 Copper-bind: Copper binding proteins, plastocyanin/azurin family; InterPro: IPR000923 Blue (type 1) copper proteins are small proteins which bind a single copper atom and which are characterised by an intense electronic absorption band near 600 nm [, ] | Back alignment and domain information |
|---|
| >TIGR02656 cyanin_plasto plastocyanin | Back alignment and domain information |
|---|
| >TIGR03102 halo_cynanin halocyanin domain | Back alignment and domain information |
|---|
| >COG3794 PetE Plastocyanin [Energy production and conversion] | Back alignment and domain information |
|---|
| >TIGR02375 pseudoazurin pseudoazurin | Back alignment and domain information |
|---|
| >TIGR03095 rusti_cyanin rusticyanin | Back alignment and domain information |
|---|
| >TIGR02657 amicyanin amicyanin | Back alignment and domain information |
|---|
| >PF06525 SoxE: Sulfocyanin (SoxE); InterPro: IPR010532 Members of this family are blue-copper redox proteins designated sulfocyanin, from the archaeal genera Sulfolobus, Ferroplasma, and Picrophilus | Back alignment and domain information |
|---|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
| >PF00812 Ephrin: Ephrin; InterPro: IPR001799 Ephrins are a family of proteins [] that are ligands of class V (EPH-related) receptor protein-tyrosine kinases (see IPR001426 from INTERPRO) | Back alignment and domain information |
|---|
| >KOG3858 consensus Ephrin, ligand for Eph receptor tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR03094 sulfo_cyanin sulfocyanin | Back alignment and domain information |
|---|
| >COG4454 Uncharacterized copper-binding protein [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03096 nitroso_cyanin nitrosocyanin | Back alignment and domain information |
|---|
| >PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional | Back alignment and domain information |
|---|
| >TIGR02695 azurin azurin | Back alignment and domain information |
|---|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
| >TIGR02376 Cu_nitrite_red nitrite reductase, copper-containing | Back alignment and domain information |
|---|
| >PF07732 Cu-oxidase_3: Multicopper oxidase; InterPro: IPR011707 Copper is one of the most prevalent transition metals in living organisms and its biological function is intimately related to its redox properties | Back alignment and domain information |
|---|
| >PLN02354 copper ion binding / oxidoreductase | Back alignment and domain information |
|---|
| >PLN02604 oxidoreductase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 181 | ||||
| 1ws7_A | 109 | Crystal Structure Of Mavicyanin From Cucurbita Pepo | 7e-16 | ||
| 1x9r_A | 116 | Umecyanin From Horse Raddish- Crystal Structure Of | 4e-10 | ||
| 2cbp_A | 96 | Cucumber Basic Protein, A Blue Copper Protein Lengt | 6e-08 | ||
| 1jer_A | 138 | Cucumber Stellacyanin, Cu2+, Ph 7.0 Length = 138 | 1e-07 | ||
| 1f56_A | 91 | Spinach Plantacyanin Length = 91 | 8e-06 |
| >pdb|1WS7|A Chain A, Crystal Structure Of Mavicyanin From Cucurbita Pepo Medullosa (Zucchini) Length = 109 | Back alignment and structure |
|
| >pdb|1X9R|A Chain A, Umecyanin From Horse Raddish- Crystal Structure Of The Oxidised Form Length = 116 | Back alignment and structure |
| >pdb|2CBP|A Chain A, Cucumber Basic Protein, A Blue Copper Protein Length = 96 | Back alignment and structure |
| >pdb|1JER|A Chain A, Cucumber Stellacyanin, Cu2+, Ph 7.0 Length = 138 | Back alignment and structure |
| >pdb|1F56|A Chain A, Spinach Plantacyanin Length = 91 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 181 | |||
| 1x9u_A | 116 | Umecyanin; cupredoxin, phytocyanin, copper binding | 2e-39 | |
| 1jer_A | 138 | Cucumber stellacyanin; electron transport, copper, | 2e-37 | |
| 1ws8_A | 109 | Mavicyanin; oxidized form, phytocyanin, cupredoxin | 2e-37 | |
| 1f56_A | 91 | Plantacyanin; cupredoxin, copper protein, beta bar | 3e-34 | |
| 2cbp_A | 96 | Cucumber basic protein; electron transport, phytoc | 9e-34 |
| >1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A Length = 116 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 2e-39
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 30 DILVGGKTDSWKIPSSQSDSLNQWAEKTRFQVGDSLVWKYDATRDSVLQVTKEAYLSCNT 89
D VGG WK PS WA F+VGD L + + A V VTK+A+ +C
Sbjct: 3 DYDVGGD-MEWKRPSD-PKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKK 60
Query: 90 SSPVAEYRDGNTKVKLNKSGPFYFISGTKGSCEKGQKLIVVVMSSRRRYTGISPAPAP 147
+P++ K+ LN +GP Y+I C GQKL + V+ + G P
Sbjct: 61 ENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG----GAGGGATP 114
|
| >1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1 Length = 138 | Back alignment and structure |
|---|
| >1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A Length = 109 | Back alignment and structure |
|---|
| >1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1 Length = 91 | Back alignment and structure |
|---|
| >2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1 Length = 96 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 181 | |||
| 1jer_A | 138 | Cucumber stellacyanin; electron transport, copper, | 100.0 | |
| 1x9u_A | 116 | Umecyanin; cupredoxin, phytocyanin, copper binding | 100.0 | |
| 1ws8_A | 109 | Mavicyanin; oxidized form, phytocyanin, cupredoxin | 100.0 | |
| 2cbp_A | 96 | Cucumber basic protein; electron transport, phytoc | 100.0 | |
| 1f56_A | 91 | Plantacyanin; cupredoxin, copper protein, beta bar | 100.0 | |
| 1qhq_A | 140 | Protein (auracyanin); electron transfer, cupredoxi | 99.37 | |
| 1bxv_A | 91 | Plastocyanin; copper protein, electron transfer; 1 | 99.26 | |
| 2cal_A | 154 | Rusticyanin; iron respiratory electron transport c | 99.15 | |
| 1iuz_A | 98 | Plastocyanin; electron transport; 1.60A {Ulva pert | 99.1 | |
| 2aan_A | 139 | Auracyanin A; cupredoxin fold, electron transport; | 99.04 | |
| 1plc_A | 99 | Plastocyanin; electron transport; 1.33A {Populus n | 99.04 | |
| 1pmy_A | 123 | Pseudoazurin; electron transfer(cuproprotein); 1.5 | 99.01 | |
| 1paz_A | 123 | Pseudoazurin precursor; electron transfer(cupropro | 98.99 | |
| 2gim_A | 106 | Plastocyanin; beta sheet, Cu, helix, electron tran | 98.98 | |
| 2plt_A | 98 | Plastocyanin; electron transport; 1.50A {Chlamydom | 98.98 | |
| 3erx_A | 123 | Pseudoazurin; copper protein, high-resolution, E t | 98.98 | |
| 1kdj_A | 102 | Plastocyanin; electron transfer, photosystem, PAI- | 98.97 | |
| 1byp_A | 99 | Protein (plastocyanin); electron transfer, photosy | 98.92 | |
| 1b3i_A | 97 | PETE protein, protein (plastocyanin); electron tra | 98.91 | |
| 3tu6_A | 127 | Pseudoazurin (blue copper protein); cupredoxins, b | 98.87 | |
| 3ef4_A | 124 | Pseudoazurin, blue copper protein; electron transf | 98.86 | |
| 1pcs_A | 98 | Plastocyanin; electron transport; 2.15A {Synechocy | 98.76 | |
| 4hci_A | 100 | Cupredoxin 1; structural genomics, niaid, national | 98.42 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 98.36 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 98.35 | |
| 3c75_A | 132 | Amicyanin; copper proteins, electron transfer comp | 98.29 | |
| 3cvb_A | 105 | Plastocyanin; cupredoxin, SELF assembly, copper, e | 98.28 | |
| 2ux6_A | 122 | Pseudoazurin; type-1 copper, metal-binding, redox | 98.23 | |
| 2ov0_A | 105 | Amicyanin; beta-sandwich, electron transport; 0.75 | 98.11 | |
| 1id2_A | 106 | Amicyanin; beta barrel, type-1 blue copper protein | 98.1 | |
| 2iaa_C | 128 | Azurin; quinoprotein, tryptophan tryptophylquinone | 98.1 | |
| 2ccw_A | 129 | Azurin II, AZN-2; electron transport (cuproprotein | 98.06 | |
| 1nwp_A | 128 | Azurin; electron transport, cupredoxin, electron t | 98.06 | |
| 1iko_P | 178 | Ephrin-B2; greek KEY, glycosylation, signaling pro | 97.53 | |
| 2cua_A | 135 | Protein (CUA); CUA center, electron transport; 1.6 | 97.32 | |
| 1iby_A | 112 | Nitrosocyanin; RED copper, cupredoxin, beta hairpi | 97.3 | |
| 3fsa_A | 125 | Azurin; copper, cupredoxin fold, metal-binding, pr | 96.75 | |
| 2vsm_B | 140 | Ephrin-B2; developmental protein, henipavirus, neu | 96.69 | |
| 3czu_B | 182 | Ephrin-A1; ATP-binding, kinase, nucleotide-binding | 96.57 | |
| 3d12_B | 141 | Ephrin-B3; beta propeller, protein-receptor comple | 96.35 | |
| 2x11_B | 177 | Ephrin-A5; receptor-signaling protein complex, dev | 96.35 | |
| 1shx_A | 138 | Ephrin-A5; ephrin signaling, hormone-growth factor | 96.09 | |
| 2dv6_A | 447 | Nitrite reductase; electron transfer, reduction, d | 95.3 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 94.92 | |
| 3s8f_B | 168 | Cytochrome C oxidase subunit 2; complex IV, respir | 94.86 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 94.49 | |
| 2wo3_B | 157 | Ephrin-A2; transferase-signaling protein complex, | 94.29 | |
| 3hei_B | 132 | Ephrin-A1; EPH receptor tyrosine kinase, cell memb | 91.9 | |
| 1mzy_A | 333 | Copper-containing nitrite reductase; mutant M182T, | 85.04 | |
| 1oe1_A | 336 | Dissimilatory copper-containing nitrite reductase; | 84.17 | |
| 1kbv_A | 327 | ANIA, major outer membrane protein PAN 1; ANIA[NO2 | 81.16 |
| >1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-43 Score=272.19 Aligned_cols=109 Identities=28% Similarity=0.565 Sum_probs=101.4
Q ss_pred cceEEEEeCCCCCccCCCCCCccchhcccCCceecCCEEEeeeeCCCCeEEEE-ccccCCCCCCCCCcccccCCCcEEEe
Q 030240 27 EARDILVGGKTDSWKIPSSQSDSLNQWAEKTRFQVGDSLVWKYDATRDSVLQV-TKEAYLSCNTSSPVAEYRDGNTKVKL 105 (181)
Q Consensus 27 ~a~~~~VGg~~G~W~~~~~~~~~Y~~WA~~~~f~vGD~LvF~y~~~~HsV~~V-~~~~y~~C~~~~~~~~~s~G~~~v~L 105 (181)
+|++|+|||+.| |+++++ ..+|++||++++|++||+|+|+|++++|+|+|| ++++|+.|+.++++..+++|+++|+|
T Consensus 2 ~a~~~~VGg~~G-W~~~~~-~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L 79 (138)
T 1jer_A 2 QSTVHIVGDNTG-WSVPSS-PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIER 79 (138)
T ss_dssp CCCEEETTGGGC-SSCCSS-TTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEE
T ss_pred CceEEEECCcCc-CcCCCC-ccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEe
Confidence 578999999999 999854 356999999999999999999999999999999 99999999999999999999999999
Q ss_pred -cccccEEEEeCCCCCCcCCCeEEEEeecCCCC
Q 030240 106 -NKSGPFYFISGTKGSCEKGQKLIVVVMSSRRR 137 (181)
Q Consensus 106 -~~~G~~YFic~v~~HC~~GmKl~I~V~~~~~~ 137 (181)
+++|++||||++++||++||||+|+|....++
T Consensus 80 ~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~ 112 (138)
T 1jer_A 80 LDELGMHYFVCTVGTHCSNGQKLSINVVAANAT 112 (138)
T ss_dssp CCSSEEEEEECCSTTTGGGTCEEEEEEECCC--
T ss_pred ccCCcCEEEEcCCCCccccCCEEEEEEcCCCCC
Confidence 99999999999999999999999999987764
|
| >1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A | Back alignment and structure |
|---|
| >1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A | Back alignment and structure |
|---|
| >2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
| >1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1 | Back alignment and structure |
|---|
| >1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A | Back alignment and structure |
|---|
| >1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A | Back alignment and structure |
|---|
| >2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A | Back alignment and structure |
|---|
| >1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A | Back alignment and structure |
|---|
| >2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus} | Back alignment and structure |
|---|
| >1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A | Back alignment and structure |
|---|
| >1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1 | Back alignment and structure |
|---|
| >1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A* | Back alignment and structure |
|---|
| >2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A | Back alignment and structure |
|---|
| >2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1 | Back alignment and structure |
|---|
| >3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A | Back alignment and structure |
|---|
| >1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A | Back alignment and structure |
|---|
| >1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A | Back alignment and structure |
|---|
| >1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A* | Back alignment and structure |
|---|
| >3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
| >3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0 | Back alignment and structure |
|---|
| >1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A | Back alignment and structure |
|---|
| >4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A | Back alignment and structure |
|---|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
| >3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
| >3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A | Back alignment and structure |
|---|
| >2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A | Back alignment and structure |
|---|
| >2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ... | Back alignment and structure |
|---|
| >1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1 | Back alignment and structure |
|---|
| >2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C* | Back alignment and structure |
|---|
| >2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A | Back alignment and structure |
|---|
| >1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A | Back alignment and structure |
|---|
| >1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5 | Back alignment and structure |
|---|
| >2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B* | Back alignment and structure |
|---|
| >1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A | Back alignment and structure |
|---|
| >3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ... | Back alignment and structure |
|---|
| >2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E | Back alignment and structure |
|---|
| >3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B* | Back alignment and structure |
|---|
| >3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus} | Back alignment and structure |
|---|
| >2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens} | Back alignment and structure |
|---|
| >1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B* | Back alignment and structure |
|---|
| >2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans} | Back alignment and structure |
|---|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
| >3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ... | Back alignment and structure |
|---|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
| >2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
| >3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0 | Back alignment and structure |
|---|
| >1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A | Back alignment and structure |
|---|
| >1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ... | Back alignment and structure |
|---|
| >1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 181 | ||||
| d2cbpa_ | 96 | b.6.1.1 (A:) Plantacyanin {Cucumber (Cucumis sativ | 1e-36 | |
| d1ws8a_ | 104 | b.6.1.1 (A:) Mavicyanin {Zucchini (Cucurbita pepo) | 8e-34 | |
| d1f56a_ | 91 | b.6.1.1 (A:) Plantacyanin {Spinach (Spinacia olera | 1e-32 | |
| d1jera_ | 110 | b.6.1.1 (A:) Stellacyanin {Cucumber (Cucumis sativ | 5e-32 |
| >d2cbpa_ b.6.1.1 (A:) Plantacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]} Length = 96 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Plantacyanin species: Cucumber (Cucumis sativus) [TaxId: 3659]
Score = 120 bits (303), Expect = 1e-36
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 33 VGGKTDSWKIPSSQSDSLNQWAEKTRFQVGDSLVWKYDATRDSVLQVTKEAYLSCNTSSP 92
VGG + W + W + RF+ GD L++ Y+ + +V+ V + + +CNT +
Sbjct: 5 VGG-SGGWTFNT------ESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAG 57
Query: 93 VAEYRDGNTKVKLNKSGPFYFISGTKGSCEKGQKLIVVVM 132
Y G ++KL K G YFI G C+ G K+ V +
Sbjct: 58 AKVYTSGRDQIKLPK-GQSYFICNFPGHCQSGMKIAVNAL 96
|
| >d1ws8a_ b.6.1.1 (A:) Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663]} Length = 104 | Back information, alignment and structure |
|---|
| >d1f56a_ b.6.1.1 (A:) Plantacyanin {Spinach (Spinacia oleracea) [TaxId: 3562]} Length = 91 | Back information, alignment and structure |
|---|
| >d1jera_ b.6.1.1 (A:) Stellacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]} Length = 110 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 181 | |||
| d1ws8a_ | 104 | Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663 | 100.0 | |
| d2cbpa_ | 96 | Plantacyanin {Cucumber (Cucumis sativus) [TaxId: 3 | 100.0 | |
| d1jera_ | 110 | Stellacyanin {Cucumber (Cucumis sativus) [TaxId: 3 | 100.0 | |
| d1f56a_ | 91 | Plantacyanin {Spinach (Spinacia oleracea) [TaxId: | 99.98 | |
| d1bypa_ | 99 | Plastocyanin {White campion (Silene pratensis) [Ta | 99.19 | |
| d1iuza_ | 98 | Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: | 99.16 | |
| d1kdja_ | 102 | Plastocyanin {Fern (Adiantum capillus-veneris) [Ta | 99.13 | |
| d2plta_ | 98 | Plastocyanin {Green alga (Chlamydomonas reinhardti | 99.1 | |
| d2jxma1 | 97 | Plastocyanin {Photosynthetic prokaryote (Prochloro | 99.02 | |
| d1plca_ | 99 | Plastocyanin {Poplar (Populus nigra), variant ital | 99.02 | |
| d2cj3a1 | 105 | Plastocyanin {Anabaena variabilis [TaxId: 1172]} | 98.99 | |
| d1paza_ | 120 | Pseudoazurin {Alcaligenes faecalis, strain s-6 [Ta | 98.94 | |
| d2q5ba1 | 105 | Plastocyanin {Cyanobacterium (Phormidium laminosum | 98.92 | |
| d1adwa_ | 123 | Pseudoazurin {Thiosphaera pantotropha [TaxId: 8236 | 98.89 | |
| d1pcsa_ | 98 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.76 | |
| d1qhqa_ | 139 | Auracyanin {Chloroflexus aurantiacus [TaxId: 1108] | 98.75 | |
| d1pmya_ | 123 | Pseudoazurin {Methylobacterium extorquens, strain | 98.71 | |
| d1bqka_ | 124 | Pseudoazurin {Achromobacter cycloclastes [TaxId: 2 | 98.71 | |
| d1bxua_ | 91 | Plastocyanin {Cyanobacterium (Synechocystis sp.), | 98.69 | |
| d2ov0a1 | 105 | Amicyanin {Paracoccus denitrificans [TaxId: 266]} | 98.23 | |
| d1id2a_ | 106 | Amicyanin {Paracoccus versutus (Thiobacillus versu | 98.04 | |
| d2ccwa1 | 129 | Azurin {Alcaligenes xylosoxidans, NCIMB (11015), d | 97.94 | |
| d1cuoa_ | 129 | Azurin {Methylomonas sp. j [TaxId: 32038]} | 97.94 | |
| d1e30a_ | 153 | Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920 | 97.39 | |
| d1ibya_ | 112 | Red copper protein nitrosocyanin {Nitrosomonas eur | 97.27 | |
| d1jzga_ | 128 | Azurin {Pseudomonas aeruginosa [TaxId: 287]} | 97.2 | |
| d1nwpa_ | 128 | Azurin {Pseudomonas putida [TaxId: 303]} | 97.16 | |
| d1fwxa1 | 132 | Nitrous oxide reductase, C-terminal domain {Paraco | 96.82 | |
| d2cuaa_ | 122 | Cytochrome c oxidase {Thermus thermophilus, ba3 ty | 96.72 | |
| d1qnia1 | 131 | Nitrous oxide reductase, C-terminal domain {Pseudo | 96.56 | |
| d1ikop_ | 141 | Ephrin-b2 ectodomain {Mouse (Mus musculus) [TaxId: | 96.07 | |
| d1shxa1 | 138 | Ephrin-a5 {Mouse (Mus musculus) [TaxId: 10090]} | 95.81 | |
| d1aoza1 | 129 | Ascorbate oxidase {Zucchini (Cucurbita pepo var. m | 95.55 | |
| d1kbva1 | 151 | Nitrite reductase, NIR {Neisseria gonorrhoeae, Ani | 95.18 | |
| d1oe2a1 | 159 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 93.69 | |
| d1gyca1 | 130 | Laccase {Trametes versicolor, laccase 2 [TaxId: 53 | 92.27 | |
| d1mzya1 | 153 | Nitrite reductase, NIR {Rhodobacter sphaeroides [T | 91.88 | |
| d2bw4a1 | 157 | Nitrite reductase, NIR {Alcaligenes xylosoxidans [ | 91.51 | |
| d2q9oa1 | 162 | Laccase {Melanocarpus albomyces [TaxId: 204285]} | 90.11 | |
| d1hfua1 | 131 | Laccase {Inky cap fungus (Coprinus cinereus) [TaxI | 86.51 | |
| d1kcwa2 | 146 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 80.4 | |
| d2j5wa2 | 145 | Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | 80.1 |
| >d1ws8a_ b.6.1.1 (A:) Mavicyanin {Zucchini (Cucurbita pepo) [TaxId: 3663]} | Back information, alignment and structure |
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class: All beta proteins fold: Cupredoxin-like superfamily: Cupredoxins family: Plastocyanin/azurin-like domain: Mavicyanin species: Zucchini (Cucurbita pepo) [TaxId: 3663]
Probab=100.00 E-value=6.2e-39 Score=237.58 Aligned_cols=103 Identities=39% Similarity=0.741 Sum_probs=97.7
Q ss_pred ceEEEEeCCCCCccCCCCCCccchhcccCCceecCCEEEeeeeCCCCeEEEEccccCCCCCCCCCcccccCCCcEEEecc
Q 030240 28 ARDILVGGKTDSWKIPSSQSDSLNQWAEKTRFQVGDSLVWKYDATRDSVLQVTKEAYLSCNTSSPVAEYRDGNTKVKLNK 107 (181)
Q Consensus 28 a~~~~VGg~~G~W~~~~~~~~~Y~~WA~~~~f~vGD~LvF~y~~~~HsV~~V~~~~y~~C~~~~~~~~~s~G~~~v~L~~ 107 (181)
|++|+|||+.| |+.+++ .+|++||++++|++||+|+|+|+++.|+|+||++++|++|+..+++..+++|++.|+|++
T Consensus 2 at~~~VGg~~g-W~~~~~--~~Y~~Wa~~~~f~vGD~l~F~y~~~~h~V~~v~~~~y~~C~~~~~~~~~~~G~~~v~l~~ 78 (104)
T d1ws8a_ 2 ATVHKVGDSTG-WTTLVP--YDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKR 78 (104)
T ss_dssp CCEEETTGGGC-SCSSSC--CCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCS
T ss_pred CcEEEeCCcCc-cCcCCC--cCHHHHhhCCcCCCCCEEEEEECCCCceEEEECHHHhcCCcCCCccccccCCCeEEEEec
Confidence 78999999999 998765 349999999999999999999999999999999999999999999988999999999999
Q ss_pred cccEEEEeCCCCCCcCCCeEEEEeec
Q 030240 108 SGPFYFISGTKGSCEKGQKLIVVVMS 133 (181)
Q Consensus 108 ~G~~YFic~v~~HC~~GmKl~I~V~~ 133 (181)
+|++||||++++||++|||++|+|++
T Consensus 79 ~g~~yF~C~~~~HC~~Gmkl~I~V~P 104 (104)
T d1ws8a_ 79 PGTFYFLCGIPGHCQLGQKVEIKVDP 104 (104)
T ss_dssp SEEEEEECCSTTTTTTTCEEEEEECC
T ss_pred CccEEEECCCcchhhCCCEEEEEECC
Confidence 99999999999999999999999963
|
| >d2cbpa_ b.6.1.1 (A:) Plantacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]} | Back information, alignment and structure |
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| >d1jera_ b.6.1.1 (A:) Stellacyanin {Cucumber (Cucumis sativus) [TaxId: 3659]} | Back information, alignment and structure |
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| >d1f56a_ b.6.1.1 (A:) Plantacyanin {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
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| >d1bypa_ b.6.1.1 (A:) Plastocyanin {White campion (Silene pratensis) [TaxId: 52853]} | Back information, alignment and structure |
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| >d1iuza_ b.6.1.1 (A:) Plastocyanin {Ulva pertusa, a sea lettuce [TaxId: 3120]} | Back information, alignment and structure |
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| >d1kdja_ b.6.1.1 (A:) Plastocyanin {Fern (Adiantum capillus-veneris) [TaxId: 13818]} | Back information, alignment and structure |
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| >d2plta_ b.6.1.1 (A:) Plastocyanin {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
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| >d2jxma1 b.6.1.1 (A:1-97) Plastocyanin {Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId: 1223]} | Back information, alignment and structure |
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| >d1plca_ b.6.1.1 (A:) Plastocyanin {Poplar (Populus nigra), variant italica [TaxId: 3691]} | Back information, alignment and structure |
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| >d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
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| >d1paza_ b.6.1.1 (A:) Pseudoazurin {Alcaligenes faecalis, strain s-6 [TaxId: 511]} | Back information, alignment and structure |
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| >d2q5ba1 b.6.1.1 (A:1-105) Plastocyanin {Cyanobacterium (Phormidium laminosum) [TaxId: 32059]} | Back information, alignment and structure |
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| >d1adwa_ b.6.1.1 (A:) Pseudoazurin {Thiosphaera pantotropha [TaxId: 82367]} | Back information, alignment and structure |
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| >d1pcsa_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId: 1143]} | Back information, alignment and structure |
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| >d1qhqa_ b.6.1.1 (A:) Auracyanin {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
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| >d1pmya_ b.6.1.1 (A:) Pseudoazurin {Methylobacterium extorquens, strain am1 [TaxId: 408]} | Back information, alignment and structure |
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| >d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes [TaxId: 223]} | Back information, alignment and structure |
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| >d1bxua_ b.6.1.1 (A:) Plastocyanin {Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId: 1143]} | Back information, alignment and structure |
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| >d2ov0a1 b.6.1.1 (A:1-105) Amicyanin {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
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| >d1id2a_ b.6.1.1 (A:) Amicyanin {Paracoccus versutus (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
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| >d2ccwa1 b.6.1.1 (A:1-129) Azurin {Alcaligenes xylosoxidans, NCIMB (11015), different isoforms [TaxId: 85698]} | Back information, alignment and structure |
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| >d1cuoa_ b.6.1.1 (A:) Azurin {Methylomonas sp. j [TaxId: 32038]} | Back information, alignment and structure |
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| >d1e30a_ b.6.1.1 (A:) Rusticyanin {Thiobacillus ferrooxidans [TaxId: 920]} | Back information, alignment and structure |
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| >d1ibya_ b.6.1.4 (A:) Red copper protein nitrosocyanin {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
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| >d1jzga_ b.6.1.1 (A:) Azurin {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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| >d1nwpa_ b.6.1.1 (A:) Azurin {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
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| >d1fwxa1 b.6.1.4 (A:452-581) Nitrous oxide reductase, C-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
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| >d2cuaa_ b.6.1.2 (A:) Cytochrome c oxidase {Thermus thermophilus, ba3 type [TaxId: 274]} | Back information, alignment and structure |
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| >d1qnia1 b.6.1.4 (A:451-581) Nitrous oxide reductase, C-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
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| >d1ikop_ b.6.1.5 (P:) Ephrin-b2 ectodomain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1shxa1 b.6.1.5 (A:32-170) Ephrin-a5 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1aoza1 b.6.1.3 (A:1-129) Ascorbate oxidase {Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]} | Back information, alignment and structure |
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| >d1kbva1 b.6.1.3 (A:13-163) Nitrite reductase, NIR {Neisseria gonorrhoeae, AniA [TaxId: 485]} | Back information, alignment and structure |
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| >d1oe2a1 b.6.1.3 (A:1-159) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
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| >d1gyca1 b.6.1.3 (A:1-130) Laccase {Trametes versicolor, laccase 2 [TaxId: 5325]} | Back information, alignment and structure |
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| >d1mzya1 b.6.1.3 (A:41-193) Nitrite reductase, NIR {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
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| >d2bw4a1 b.6.1.3 (A:8-164) Nitrite reductase, NIR {Alcaligenes xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
| >d2q9oa1 b.6.1.3 (A:1-162) Laccase {Melanocarpus albomyces [TaxId: 204285]} | Back information, alignment and structure |
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| >d1hfua1 b.6.1.3 (A:1-131) Laccase {Inky cap fungus (Coprinus cinereus) [TaxId: 5346]} | Back information, alignment and structure |
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| >d1kcwa2 b.6.1.3 (A:193-338) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2j5wa2 b.6.1.3 (A:555-699) Ceruloplasmin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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