Citrus Sinensis ID: 030278

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Protein Sequence
MLRCFDLVRFSMVICRAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSGKLK
Secondary Structure (PSIPRED)
cHHHHHcHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccEEEccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccEEEEEEEEccHcHHHHHHHHHccccccccHEEEEEHHcccccHEEEEEHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MLRCFDLVRFSMVICRAVAYIPLTILAVPASVltlgggylfglpvgfvadsigATIGAGAAFLLgrtigkpfvisklkdypqfrSVALAIQRSGFKIVLLLRlvpllpfnmLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSGKLK
Flexible Loop (DISEMBL)
MLRCFDLVRFSMVICRAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSGKLK
Low Complexity Region (SEG)
MLRCFDLVRFSMVICRAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIvlllrlvpllpFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSGKLK
Disordered region (IsUnstruct)
**RCFDLVRFSMVICRAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS****
Disordered Region (DISOPRED)
MLRCF**VRFSMVICRAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSGKLK
Disordered Region (DISEMBL)
MLRCFDLVRFSMVICRAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSGKLK
Disordered Region (DISPRO)
MLRCFDLVRFSMVICRAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSGKLK
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
ooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLRCFDLVRFSMVICRAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVSGKLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	180	2.2.26 [Sep-21-2011]
Q55909	209	TVP38/TMEM64 family membr	N/A	no	0.866	0.746	0.379	7e-24
Q3U145	381	Transmembrane protein 64	yes	no	0.677	0.320	0.338	5e-12
P76219	236	TVP38/TMEM64 family membr	N/A	no	0.65	0.495	0.316	5e-12
Q6YI46	380	Transmembrane protein 64	yes	no	0.677	0.321	0.322	6e-11
O62126	246	Transmembrane protein 41	yes	no	0.838	0.613	0.279	5e-10
Q8L586	287	Uncharacterized membrane	no	no	0.827	0.519	0.294	3e-09
A4II98	278	Transmembrane protein 41B	yes	no	0.855	0.553	0.272	2e-08
Q5U4K5	278	Transmembrane protein 41B	N/A	no	0.855	0.553	0.272	3e-08
A1A5V7	282	Transmembrane protein 41B	no	no	0.777	0.496	0.284	3e-08
Q8MXN7	334	Transmembrane protein 41	no	no	0.822	0.443	0.293	3e-08

>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1

 Score =  110 bits (274), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 99/158 (62%), Gaps = 2/158 (1%)

Query: 20  YIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKD 79
           Y   T++ +P S+LTLG G +FG+ +G +   IGAT+GA AAFL+GR + + +V  K+  
Sbjct: 27  YTVATVVFLPGSILTLGAGVVFGVILGSIYVFIGATLGATAAFLVGRYLARGWVAKKIAG 86

Query: 80  YPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITL 139
             +F+++  A+ + G KIV+L RL P+ PFN+LNY   +T V L +Y++ S +GM+P T+
Sbjct: 87  NQKFKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYAYGITNVSLKDYVIGS-LGMIPGTI 145

Query: 140 ALVYVGTTLKDLSDVTHGWNEFSKT-RWAFLIFGLVVS 176
             VY+G+    L+ +    N+ + T +W   I G + +
Sbjct: 146 MYVYIGSLAGSLATLGTATNQANPTLQWTIRIVGFIAT 183

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 2/124 (1%)

Query: 32  VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQ 91
           VL +  GYL+G  +G     +G  IG   A ++ + +   +V +++++  +  +V   ++
Sbjct: 181 VLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIRVVE 240

Query: 92  R-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 150
             SG K+V L RL P+ PF + N + S+T VPL  Y++AS  G++P  L   Y+GTTL+ 
Sbjct: 241 GGSGLKVVALARLTPI-PFGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSYLGTTLRT 299

Query: 151 LSDV 154
           + DV
Sbjct: 300 MEDV 303

Mus musculus (taxid: 10090)

>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) GN=ydjX PE=3 SV=2

 Score = 70.5 bits (171), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 66/117 (56%)

Query: 20  YIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKD 79
           +I  T+L +P S+L + GG +FG  +G +   I AT+ +  +FLL R +G+  ++  +  
Sbjct: 55  FIIATLLLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGH 114

Query: 80  YPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
              F+++   I R+G   ++L RL+PL P+N+ NY   +T +    Y L S +  +P
Sbjct: 115 SNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLP 171

Escherichia coli (strain K12) (taxid: 83333)

>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2

 Score = 67.0 bits (162), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 2/124 (1%)

Query: 32  VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQ 91
           VL +  GYL+G  +G     +G  IG   A ++ + +   +V ++++   +  +V   ++
Sbjct: 180 VLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVVE 239

Query: 92  R-SGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 150
             SG K+V L RL P+ PF + N + S+T + L  Y++AS +G++P  L   Y+GTTL+ 
Sbjct: 240 GGSGLKVVALARLTPI-PFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSYLGTTLRT 298

Query: 151 LSDV 154
           + DV
Sbjct: 299 MEDV 302

Homo sapiens (taxid: 9606)

>sp|O62126|TM41_CAEEL Transmembrane protein 41 homolog OS=Caenorhabditis elegans GN=tag-175 PE=3 SV=1

 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)

Query: 9   RFSMVICRA-VAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGR 66
            +S+V+C   V Y+ L   A+P S+ LT+  GYLF   V  V     +  GA   + + +
Sbjct: 66  NYSVVLCGVIVVYVFLQSFAIPGSIFLTILSGYLFPFYVAIVLVCSCSATGAAICYTISK 125

Query: 67  TIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLE 125
             G+ FV+ K  +        L+  R  F   ++ LR+ P++P  ++N    V  VPL  
Sbjct: 126 LFGRSFVLQKFPERIAKWQDDLSKHRDDFLNYMIFLRVTPIVPNWLINIASPVLDVPLAP 185

Query: 126 YMLASWIGMMPITLALVYVGTTLKDLSDVTHGWN 159
           +   +++G+ P +   +  G+TL+ LS  +  W+
Sbjct: 186 FFWGTFLGVAPPSFLYIQAGSTLEQLSHTSVAWS 219

Caenorhabditis elegans (taxid: 6239)

>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1

 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 9   RFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRT 67
           RF +  C    YI +    +P ++ ++L  G LFG+  GFV   + AT GA + F L + 
Sbjct: 110 RFILGYCST--YIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKL 167

Query: 68  IGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEY 126
           +G+P V     +  +F    +A +R      +L LR+ P LP   +N    +  +P   +
Sbjct: 168 VGRPLVNWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVF 227

Query: 127 MLASWIGMMPITLALVYVGTTLKDLSDVTHGWN 159
            LA+ +G+MP +   V  G  L DL  V   ++
Sbjct: 228 FLATLVGLMPASYITVRAGLALGDLRSVKDLYD 260

Arabidopsis thaliana (taxid: 3702)

>sp|A4II98|TM41B_XENTR Transmembrane protein 41B OS=Xenopus tropicalis GN=tmem41b PE=2 SV=1

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 4/158 (2%)

Query: 6   DLVRFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLL 64
           D     +++     YI L   A+P S+ L++  G+L+  P+      + + +GA  ++LL
Sbjct: 94  DTFYVEVLVAYFTTYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFSYLL 153

Query: 65  GRTIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPL 123
              +G+P V   L D     S  +   R      ++ LR+ P LP   +N    V  VPL
Sbjct: 154 SYLVGRPVVYKYLSDKAIKWSQQVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPL 213

Query: 124 LEYMLASWIGMMPITLALVYVGTTLKDLSDVTHG--WN 159
             + L ++IG+ P +   +  GTTL  L+       WN
Sbjct: 214 KVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWN 251

Xenopus tropicalis (taxid: 8364)

>sp|Q5U4K5|TM41B_XENLA Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 4/158 (2%)

Query: 6   DLVRFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLL 64
           D     +++     YI L   A+P S+ L++  G+L+  P+      + + +GA   +LL
Sbjct: 94  DTFYVEVLVAYFTTYIFLQTFAIPGSIFLSILSGFLYPFPLALFLVCLCSGLGASFCYLL 153

Query: 65  GRTIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPL 123
              +G+P V   L D     S  +   R      ++ LR+ P LP   +N    V  VPL
Sbjct: 154 SYLVGRPVVYKYLSDKAIKWSQQVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPL 213

Query: 124 LEYMLASWIGMMPITLALVYVGTTLKDLSDVTHG--WN 159
             + L ++IG+ P +   +  GTTL  L+       WN
Sbjct: 214 KVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWN 251

Xenopus laevis (taxid: 8355)

>sp|A1A5V7|TM41B_DANRE Transmembrane protein 41B OS=Danio rerio GN=tmem41b PE=2 SV=1

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 4/144 (2%)

Query: 20  YIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 78
           YI L   A+P S+ L++  GYL+  P+      + + +GA   ++L   +G+P V   L 
Sbjct: 112 YIFLQTFAIPGSIFLSILSGYLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPMVYKYLT 171

Query: 79  DYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPI 137
           +  Q  S  +   R      ++ LR+ P LP   +N    V  VPL  + L +++G+ P 
Sbjct: 172 ERAQKWSQQVDKHREHLINYIIFLRITPFLPNWFINITSPVINVPLGVFFLGTFLGVAPP 231

Query: 138 TLALVYVGTTLKDLSDVTHG--WN 159
           +   +  GTTL  L+       WN
Sbjct: 232 SFVAINAGTTLYKLTTAGEAVSWN 255

Danio rerio (taxid: 7955)

>sp|Q8MXN7|TM41_DICDI Transmembrane protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0275543 PE=3 SV=2

 Score = 58.2 bits (139), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 2/150 (1%)

Query: 6   DLVRFSMVICRAVAYIPLTILAVPASV-LTLGGGYLFGLPVGFVADSIGATIGAGAAFLL 64
           D   F ++    V Y  L   ++P SV L+   G LFGL VGF      AT+GA  ++L+
Sbjct: 152 DDNYFIVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFVATLGATFSYLI 211

Query: 65  GRTIGKPFVISKLKDYPQFRSVALAIQRSGF-KIVLLLRLVPLLPFNMLNYLLSVTPVPL 123
              IG+  V     D  +  S +L+ +R      ++ LR+ P LP   +N    +  VP+
Sbjct: 212 SYYIGRNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLPNWFINLASPLLDVPI 271

Query: 124 LEYMLASWIGMMPITLALVYVGTTLKDLSD 153
             + + ++IG+MP T   V  G  ++++ +
Sbjct: 272 HTFAIGTFIGIMPATFLAVKAGIQIQNIQN 301

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
388490712	274	unknown [Medicago truncatula]	0.888	0.583	0.843	1e-71
388493816	227	unknown [Medicago truncatula]	0.888	0.704	0.9	3e-71
388517845	274	unknown [Medicago truncatula]	0.888	0.583	0.9	7e-71
358249295	274	uncharacterized protein LOC100810779 [Gl	0.888	0.583	0.9	2e-69
356555618	274	PREDICTED: TVP38/TMEM64 family membrane	0.888	0.583	0.9	2e-69
255552219	302	conserved hypothetical protein [Ricinus	0.888	0.529	0.906	3e-69
449466368	275	PREDICTED: TVP38/TMEM64 family membrane	0.888	0.581	0.893	1e-68
224107213	275	predicted protein [Populus trichocarpa]	0.888	0.581	0.881	2e-68
225432530	274	PREDICTED: TVP38/TMEM64 family membrane	0.888	0.583	0.881	2e-68
356564532	276	PREDICTED: TVP38/TMEM64 family membrane	0.877	0.572	0.803	2e-66

>gi|388490712|gb|AFK33422.1| unknown [Medicago truncatula]

 Score =  274 bits (700), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 135/160 (84%), Positives = 147/160 (91%)

Query: 17  AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
           AVAYIPLTILAVPASVLTLGGGYLFGLPVG VADS+GATIGA AAFLLG TIGK FV SK
Sbjct: 54  AVAYIPLTILAVPASVLTLGGGYLFGLPVGIVADSVGATIGAVAAFLLGGTIGKSFVASK 113

Query: 77  LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
           LKDYPQF+SV++A QRSGFKIV LLRLVPLLP+N+LNYLLSVTPVPL EY LASW+GMMP
Sbjct: 114 LKDYPQFKSVSIATQRSGFKIVFLLRLVPLLPYNILNYLLSVTPVPLWEYTLASWLGMMP 173

Query: 137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
           +T+ALVY GTTLKD+SDVTHGW EFSKTRWA +IF LV+S
Sbjct: 174 LTVALVYAGTTLKDISDVTHGWGEFSKTRWAMIIFSLVIS 213

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493816|gb|AFK34974.1| unknown [Medicago truncatula]

 Score =  272 bits (696), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 144/160 (90%), Positives = 158/160 (98%)

Query: 17  AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
           AVAYIPLT+LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+PFV+S+
Sbjct: 7   AVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRPFVVSR 66

Query: 77  LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
           LKDYP+F+SVA+AI+RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV L+EYMLASW+GMMP
Sbjct: 67  LKDYPKFKSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSLVEYMLASWLGMMP 126

Query: 137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
           ITLALVYVGTTLKDLSDVTHGWNEFSK+RWAF+I GL+VS
Sbjct: 127 ITLALVYVGTTLKDLSDVTHGWNEFSKSRWAFIIIGLIVS 166

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517845|gb|AFK46984.1| unknown [Medicago truncatula]

 Score =  271 bits (694), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 144/160 (90%), Positives = 158/160 (98%)

Query: 17  AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
           AVAYIPLT+LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+PFV+S+
Sbjct: 54  AVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRPFVVSR 113

Query: 77  LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
           LKDYP+F+SVA+AI+RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV L+EYMLASW+GMMP
Sbjct: 114 LKDYPKFKSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSLVEYMLASWLGMMP 173

Query: 137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
           ITLALVYVGTTLKDLSDVTHGWNEFSK+RWAF+I GL+VS
Sbjct: 174 ITLALVYVGTTLKDLSDVTHGWNEFSKSRWAFIIIGLIVS 213

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249295|ref|NP_001239770.1| uncharacterized protein LOC100810779 [Glycine max] gi|255646580|gb|ACU23764.1| unknown [Glycine max]

 Score =  266 bits (681), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/160 (90%), Positives = 155/160 (96%)

Query: 17  AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
           AVAYIPLT+LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ FV+S+
Sbjct: 54  AVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSR 113

Query: 77  LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
           LKDYPQFRSVA+AI+RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV + EYMLASW+GMMP
Sbjct: 114 LKDYPQFRSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSIGEYMLASWLGMMP 173

Query: 137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
           ITLALVYVGTTLKDLSDVTHGW EFSKTRWAF+I GLV+S
Sbjct: 174 ITLALVYVGTTLKDLSDVTHGWGEFSKTRWAFIILGLVIS 213

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555618|ref|XP_003546127.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine max]

 Score =  266 bits (681), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/160 (90%), Positives = 155/160 (96%)

Query: 17  AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
           AVAYIPLT+LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ FV+S+
Sbjct: 54  AVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVVSR 113

Query: 77  LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
           LKDYPQFRSVA+AI+RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV + EYMLASW+GMMP
Sbjct: 114 LKDYPQFRSVAIAIRRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSIGEYMLASWLGMMP 173

Query: 137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
           ITLALVYVGTTLKDLSDVTHGW EFSKTRWAF+I GLV+S
Sbjct: 174 ITLALVYVGTTLKDLSDVTHGWGEFSKTRWAFIILGLVIS 213

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255552219|ref|XP_002517154.1| conserved hypothetical protein [Ricinus communis] gi|223543789|gb|EEF45317.1| conserved hypothetical protein [Ricinus communis]

 Score =  266 bits (679), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 145/160 (90%), Positives = 153/160 (95%)

Query: 17  AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
           AVAYIPLT+LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ FVISK
Sbjct: 82  AVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSFVISK 141

Query: 77  LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
           LKDYPQFRSVA+AIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPL EYMLASWIGMMP
Sbjct: 142 LKDYPQFRSVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLGEYMLASWIGMMP 201

Query: 137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
           ITLALVYVGTTLKDLSDVTHGW++FS TRW  ++ G VVS
Sbjct: 202 ITLALVYVGTTLKDLSDVTHGWSKFSTTRWVCIVLGFVVS 241

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466368|ref|XP_004150898.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cucumis sativus] gi|449524669|ref|XP_004169344.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cucumis sativus]

 Score =  264 bits (674), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 143/160 (89%), Positives = 152/160 (95%)

Query: 17  AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
           ++AYIPLT+LAVPAS+LTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIGK FV+SK
Sbjct: 54  SIAYIPLTVLAVPASILTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGKSFVVSK 113

Query: 77  LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
           LKDYPQF SVA+AI RSGFKIVLLLRLVPLLPFNMLNYLLSVTPV L EYMLASW+GMMP
Sbjct: 114 LKDYPQFHSVAIAINRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVSLGEYMLASWLGMMP 173

Query: 137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
           ITL LVYVGTTLKDLSDVTHGW EFSKTRWAF+I GLVVS
Sbjct: 174 ITLTLVYVGTTLKDLSDVTHGWGEFSKTRWAFIILGLVVS 213

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107213|ref|XP_002314410.1| predicted protein [Populus trichocarpa] gi|222863450|gb|EEF00581.1| predicted protein [Populus trichocarpa]

 Score =  263 bits (673), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/160 (88%), Positives = 154/160 (96%)

Query: 17  AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
           AVAYIPLT+LAVPA+VLTLGGGYLFGLP+GFVADSIGATIGAGAAFLLGRTIG+ FV+SK
Sbjct: 55  AVAYIPLTVLAVPAAVLTLGGGYLFGLPLGFVADSIGATIGAGAAFLLGRTIGRSFVVSK 114

Query: 77  LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
           LKDYP+FRSVA+AIQ+SGFKIVLLLRLVPLLPFNMLNYLLSVTPVP+ EYMLASWIGMMP
Sbjct: 115 LKDYPKFRSVAIAIQKSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPIGEYMLASWIGMMP 174

Query: 137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
           ITLA VY+GTTLKDLSDVTHGW+EFS TRW F+I GL+VS
Sbjct: 175 ITLAFVYIGTTLKDLSDVTHGWSEFSTTRWVFIILGLLVS 214

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432530|ref|XP_002280327.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis vinifera] gi|297736982|emb|CBI26183.3| unnamed protein product [Vitis vinifera]

 Score =  263 bits (672), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 141/160 (88%), Positives = 154/160 (96%)

Query: 17  AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
           AVAYIPLT+LAVPASVLTLGGGYLFGLPVGFVADSIGAT+GAGAAFLLGRTIG+ +VISK
Sbjct: 54  AVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVADSIGATVGAGAAFLLGRTIGRSYVISK 113

Query: 77  LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
           LKDYPQFR+VA+AIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVP+ EYMLASW+GMMP
Sbjct: 114 LKDYPQFRAVAIAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPVWEYMLASWLGMMP 173

Query: 137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
           ITLALVY+GTTLKDLSDVTHGW+EFS +RW F+  GLV+S
Sbjct: 174 ITLALVYIGTTLKDLSDVTHGWHEFSTSRWIFIGLGLVIS 213

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564532|ref|XP_003550507.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine max]

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 127/158 (80%), Positives = 142/158 (89%)

Query: 19  AYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK 78
           AYIPLT+L+VPASVLTLGGGYLFGLP+GF+ADSIGAT+GA AAFLLGRTIGK  V+S+LK
Sbjct: 56  AYIPLTVLSVPASVLTLGGGYLFGLPIGFIADSIGATVGAVAAFLLGRTIGKSLVVSRLK 115

Query: 79  DYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPIT 138
           DYPQFR V +AIQRSGFKI +LLRL P +PFNMLNYLLSVTPVPL EY LASW+GMMPIT
Sbjct: 116 DYPQFRLVTIAIQRSGFKISILLRLAPFVPFNMLNYLLSVTPVPLGEYTLASWLGMMPIT 175

Query: 139 LALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
           LALVYVGTT KDLSDVT GW+EFSKT   ++I GLV+S
Sbjct: 176 LALVYVGTTFKDLSDVTRGWSEFSKTHLPWIISGLVIS 213

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
TAIR|locus:2179654	280	AT5G19070 [Arabidopsis thalian	0.888	0.571	0.775	6.9e-63
TAIR|locus:2014530	274	AT1G03260 [Arabidopsis thalian	0.888	0.583	0.712	1.7e-57
TAIR|locus:2017769	344	AT1G22850 "AT1G22850" [Arabido	0.7	0.366	0.349	2.1e-16
UNIPROTKB|Q9KRB9	229	VC_1723 "Putative uncharacteri	0.75	0.589	0.304	3.1e-12
TIGR_CMR|VC_1723	229	VC_1723 "membrane protein, put	0.75	0.589	0.304	3.1e-12
UNIPROTKB|Q0C554	250	HNE_0409 "Putative membrane pr	0.777	0.56	0.299	1.1e-11
MGI|MGI:2140359	381	Tmem64 "transmembrane protein	0.677	0.320	0.290	3.9e-10
UNIPROTKB|P76219	236	ydjX "predicted inner membrane	0.65	0.495	0.264	6.5e-10
ZFIN|ZDB-GENE-060503-182	348	tmem64 "transmembrane protein	0.677	0.350	0.301	8.7e-10
WB|WBGene00006520	246	tag-175 [Caenorhabditis elegan	0.827	0.605	0.279	1.8e-09

TAIR|locus:2179654 AT5G19070 [Arabidopsis thaliana (taxid:3702)]

 Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
 Identities = 124/160 (77%), Positives = 141/160 (88%)

Query:    17 AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
             AVAYIPLT+LAVPASVLTLGGGYLFGLP+GFVADS+GAT+G+GAAFLLGRTIGKPFV++K
Sbjct:    54 AVAYIPLTVLAVPASVLTLGGGYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAK 113

Query:    77 LKDYPQFRSVALAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
             LKDYPQF+SVALAI++SGFKI           F+MLNYLLSVTP+ L  Y+L+SW+GMMP
Sbjct:   114 LKDYPQFQSVALAIEKSGFKICLLLRLAPLLPFSMLNYLLSVTPIRLGPYLLSSWLGMMP 173

Query:   137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
             ITLALVYVGTTLKDLSDVTH W+EFS  RWAFLI  LV+S
Sbjct:   174 ITLALVYVGTTLKDLSDVTHKWSEFSPGRWAFLISSLVIS 213

GO:0005886 "plasma membrane" evidence=ISM

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2014530 AT1G03260 [Arabidopsis thaliana (taxid:3702)]

 Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 114/160 (71%), Positives = 135/160 (84%)

Query:    17 AVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
             A+AYIPLTI+AVPASVLTLGGGYLFGLPVGFVADS+GAT+GA AAFLLGRTIGK +V SK
Sbjct:    56 ALAYIPLTIVAVPASVLTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSK 115

Query:    77 LKDYPQFRSVALAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
             +K YP+F++V++AIQ+SGFKI           FNMLNYLLSVTPV L EYMLA+W+GMMP
Sbjct:   116 IKHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMP 175

Query:   137 ITLALVYVGTTLKDLSDVTHGWNEFSKTRWAFLIFGLVVS 176
             IT ALVYVGTTLKDLSD+THGW+E S  RW  ++ G+ ++
Sbjct:   176 ITFALVYVGTTLKDLSDITHGWHEVSVFRWVIMMVGVALA 215

GO:0005886 "plasma membrane" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2017769 AT1G22850 "AT1G22850" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 44/126 (34%), Positives = 69/126 (54%)

Query:    20 YIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKD 79
             Y  L ILA+PA  LT+  G LFG  +G +  SI  T+ A  AFL+ R   +  ++  ++D
Sbjct:   160 YAGLEILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLVED 219

Query:    80 YPQFRSVALAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITL 139
               +F ++  AI  +GF++           F++ NYL  +T V  + Y+L SW+GM+P + 
Sbjct:   220 NKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGSW 279

Query:   140 ALVYVG 145
             A V  G
Sbjct:   280 AYVSAG 285

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

UNIPROTKB|Q9KRB9 VC_1723 "Putative uncharacterized protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 42/138 (30%), Positives = 71/138 (51%)

Query:    18 VAYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
             V Y+ LT  ++P A+V+TL G  LFG  +  +  S  +TIGA  AFL  R + + +V +K
Sbjct:    55 VVYVLLTAFSIPGATVVTLLGAALFGFWLSLLLASFASTIGATLAFLSSRFLLRDWVQAK 114

Query:    77 LKDYPQFRSVALAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
               D  + +++   I+R G              F ++N ++ +TP+    Y   S +GM+P
Sbjct:   115 FAD--KLQTINQGIERDGAFYLLSLRLIPIFPFFLINLVMGLTPISTWRYYWVSQLGMLP 172

Query:   137 ITLALVYVGTTLKDLSDV 154
              T   +  GT L ++S +
Sbjct:   173 GTAVYLNAGTQLAEISSL 190

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|VC_1723 VC_1723 "membrane protein, putative" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 42/138 (30%), Positives = 71/138 (51%)

Query:    18 VAYIPLTILAVP-ASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK 76
             V Y+ LT  ++P A+V+TL G  LFG  +  +  S  +TIGA  AFL  R + + +V +K
Sbjct:    55 VVYVLLTAFSIPGATVVTLLGAALFGFWLSLLLASFASTIGATLAFLSSRFLLRDWVQAK 114

Query:    77 LKDYPQFRSVALAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
               D  + +++   I+R G              F ++N ++ +TP+    Y   S +GM+P
Sbjct:   115 FAD--KLQTINQGIERDGAFYLLSLRLIPIFPFFLINLVMGLTPISTWRYYWVSQLGMLP 172

Query:   137 ITLALVYVGTTLKDLSDV 154
              T   +  GT L ++S +
Sbjct:   173 GTAVYLNAGTQLAEISSL 190

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q0C554 HNE_0409 "Putative membrane protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 159 (61.0 bits), Expect = 1.1e-11, P = 1.1e-11
 Identities = 44/147 (29%), Positives = 71/147 (48%)

Query:     7 LVRFSMVICRA---VAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFL 63
             +VR ++++  A   + Y   T   VP S LT+GGG+LFGL +G  A  IGATIGA   F 
Sbjct:    60 MVRENLLLALAAYVLVYAAATTFMVPGSALTIGGGFLFGLALGTPATVIGATIGASILFF 119

Query:    64 LGRT-IGKPFVISKLKDYPQFRSVALAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVP 122
               +T IG   V+  +   P    +      S F             F  +N   ++    
Sbjct:   120 ASKTSIGA--VLRDVAG-PFLGKMQAGFAESPFSYMFALRLIPLFPFAAVNIAPALLGAK 176

Query:   123 LLEYMLASWIGMMPITLALVYVGTTLK 149
               +Y++ +++G++P TLA  ++G  +K
Sbjct:   177 YRDYLITTFLGIIPGTLAYTWIGAAVK 203

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

MGI|MGI:2140359 Tmem64 "transmembrane protein 64" [Mus musculus (taxid:10090)]

 Score = 151 (58.2 bits), Expect = 3.9e-10, P = 3.9e-10
 Identities = 36/124 (29%), Positives = 65/124 (52%)

Query:    32 VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQ 91
             VL +  GYL+G  +G     +G  IG   A ++ + +   +V +++++  +  +V   ++
Sbjct:   181 VLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIRVVE 240

Query:    92 R-SGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD 150
               SG K+           F + N + S+T VPL  Y++AS  G++P  L   Y+GTTL+ 
Sbjct:   241 GGSGLKVVALARLTPIP-FGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSYLGTTLRT 299

Query:   151 LSDV 154
             + DV
Sbjct:   300 MEDV 303

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P76219 ydjX "predicted inner membrane protein" [Escherichia coli K-12 (taxid:83333)]

 Score = 143 (55.4 bits), Expect = 6.5e-10, P = 6.5e-10
 Identities = 31/117 (26%), Positives = 57/117 (48%)

Query:    20 YIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKD 79
             +I  T+L +P S+L + GG +FG  +G +   I AT+ +  +FLL R +G+  ++  +  
Sbjct:    55 FIIATLLLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGH 114

Query:    80 YPQFRSVALAIQRSGFKIXXXXXXXXXXXFNMLNYLLSVTPVPLLEYMLASWIGMMP 136
                F+++   I R+G              +N+ NY   +T +    Y L S +  +P
Sbjct:   115 SNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLP 171

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-060503-182 tmem64 "transmembrane protein 64" [Danio rerio (taxid:7955)]

 Score = 147 (56.8 bits), Expect = 8.7e-10, P = 8.7e-10
 Identities = 38/126 (30%), Positives = 65/126 (51%)

Query:    32 VLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRSVALAIQ 91
             VL +  GYL+G  +G     +G  IG   A ++ + +   +V+SK+    Q  +V   ++
Sbjct:   147 VLNVAAGYLYGFVLGMGLVMVGVLIGTFIAHVVCKRLLTNWVLSKIGSSEQLSAVIRVVE 206

Query:    92 R-SGFKIXXXXXXXXXXXFNMLN--YLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTL 148
               SG K+           F + N  + +S+T V L  Y++AS +G++P  L   Y+GTTL
Sbjct:   207 GGSGLKVVALARLTPIP-FGLQNAVFSVSITDVSLPNYLVASSVGLLPTQLLNSYLGTTL 265

Query:   149 KDLSDV 154
             + + DV
Sbjct:   266 RTMEDV 271

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00006520 tag-175 [Caenorhabditis elegans (taxid:6239)]

 Score = 140 (54.3 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 43/154 (27%), Positives = 70/154 (45%)

Query:    10 FSMVICRA-VAYIPLTILAVPASV-LTLGGGYLFGLPVGFV-ADSIGATIGAGAAFLLGR 66
             +S+V+C   V Y+ L   A+P S+ LT+  GYLF   V  V   S  AT GA   + + +
Sbjct:    67 YSVVLCGVIVVYVFLQSFAIPGSIFLTILSGYLFPFYVAIVLVCSCSAT-GAAICYTISK 125

Query:    67 TIGKPFVISKLKDYPQFRSVALAIQRSGFKIXXXXXXXXXXXFN-MLNYLLSVTPVPLLE 125
               G+ FV+ K  +        L+  R  F              N ++N    V  VPL  
Sbjct:   126 LFGRSFVLQKFPERIAKWQDDLSKHRDDFLNYMIFLRVTPIVPNWLINIASPVLDVPLAP 185

Query:   126 YMLASWIGMMPITLALVYVGTTLKDLSDVTHGWN 159
             +   +++G+ P +   +  G+TL+ LS  +  W+
Sbjct:   186 FFWGTFLGVAPPSFLYIQAGSTLEQLSHTSVAWS 219

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	180
COG0398	223	COG0398, COG0398, Uncharacterized conserved protei	1e-23
pfam09335	123	pfam09335, SNARE_assoc, SNARE associated Golgi pro	8e-20

>gnl|CDD|223475 COG0398, COG0398, Uncharacterized conserved protein [Function unknown]

 Score = 92.8 bits (231), Expect = 1e-23
 Identities = 46/132 (34%), Positives = 82/132 (62%)

Query: 20  YIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKD 79
           Y+  T+  +P S+LTL GG LFG  +GF+   IGAT G+  AFLL R +G+ +V+  +  
Sbjct: 58  YLVATLPIIPGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLGRDWVLKFVGG 117

Query: 80  YPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITL 139
             + + +   ++R+GF  +LLLRL+P+ PF+++NY   +T +   ++ +A+ +G +P T+
Sbjct: 118 KEKVQRIDAGLERNGFWAILLLRLIPIFPFDLVNYAAGLTGISFRDFAIATLLGKLPGTI 177

Query: 140 ALVYVGTTLKDL 151
              Y+G+    +
Sbjct: 178 VYTYLGSAFLGI 189

Length = 223

>gnl|CDD|220186 pfam09335, SNARE_assoc, SNARE associated Golgi protein

 Score = 80.0 bits (198), Expect = 8e-20
 Identities = 42/121 (34%), Positives = 75/121 (61%), Gaps = 3/121 (2%)

Query: 28  VPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFR--- 84
           +P +VL +  G LFG  +GF+   +GA +G+  A+LLGR +G+  +  +L     F+   
Sbjct: 1   LPGTVLLIAAGALFGPWLGFLVALLGALLGSLLAYLLGRYLGRRALRRRLLKEKAFQRLQ 60

Query: 85  SVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYV 144
            V   ++R GFK +LLLRL+P +P +++NY+  ++ V    ++L +++G++P  L  VY+
Sbjct: 61  RVERLVERYGFKALLLLRLLPGVPRDLVNYVAGLSRVSFRRFLLGTFLGILPWALLYVYL 120

Query: 145 G 145
           G
Sbjct: 121 G 121

This is a family of SNARE associated Golgi proteins. The yeast member of this family localises with the t-SNARE Tlg2. Length = 123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	180
COG0398	223	Uncharacterized conserved protein [Function unknow	99.97
COG0586	208	DedA Uncharacterized membrane-associated protein [	99.95
PF09335	123	SNARE_assoc: SNARE associated Golgi protein; Inter	99.93
PRK10847	219	hypothetical protein; Provisional	99.93
COG1238	161	Predicted membrane protein [Function unknown]	99.74
KOG3140	275	consensus Predicted membrane protein [Function unk	99.61
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	97.7
PRK01844	72	hypothetical protein; Provisional	89.76
PRK00523	72	hypothetical protein; Provisional	88.54
COG2839	160	Uncharacterized protein conserved in bacteria [Fun	85.55
PF07155	169	ECF-ribofla_trS: ECF-type riboflavin transporter,	85.15
PRK11677	134	hypothetical protein; Provisional	84.2

>COG0398 Uncharacterized conserved protein [Function unknown]

Probab=99.97  E-value=6.8e-29  Score=194.42  Aligned_cols=144  Identities=32%  Similarity=0.627  Sum_probs=138.6

Q ss_pred             chhhhhHHHHHHH-HHHHHHHHhcccCchHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhcCch
Q 030278            3 RCFDLVRFSMVIC-RAVAYIPLTILAVPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYP   81 (180)
Q Consensus         3 ~~~~~~~~~~~~~-f~~~~~~~~~~~~P~~~~~~~~G~~~g~~~~~l~~~~g~~lg~~~~y~igr~~~~~~~~~~~~~~~   81 (180)
                      +++++++..++++ |++.++....+++|++++++++|.+||++.|.+++++|+++|+.+.|+++|+++|++.+++.++++
T Consensus        40 ~~i~~~g~~~pl~~fil~~l~~~~~~iP~~il~l~~g~ifG~~~G~~~s~~G~~~gs~~~Fll~R~~gr~~~~~~~~~~~  119 (223)
T COG0398          40 EWIQAYGALGPLVFFILLYLVATLPIIPGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLGRDWVLKFVGGKE  119 (223)
T ss_pred             HHHHHcCchHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcccH
Confidence            6788999899999 777888888889999999999999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHHHHHccchhhhHHHhhcCCCChhHHHHHhhccCCChhhHHHHHHHhhHHHHHHHHHHHh
Q 030278           82 QFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGT  146 (180)
Q Consensus        82 ~~~~~~~~~~~~g~~~~~l~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~ig~~~~~~~~~~~G~  146 (180)
                      +.+|.++..+|+|++.+++.|++|++|++++||++|.+++|+++|.+++.+|++|+++.|+++|+
T Consensus       120 ~~~~~~~~~~~~g~~~i~~lrl~P~~P~~lvn~aaglt~is~~~f~ias~lG~~P~~i~y~~~G~  184 (223)
T COG0398         120 KVQRIDAGLERNGFWAILLLRLIPIFPFDLVNYAAGLTGISFRDFAIATLLGKLPGTIVYTYLGS  184 (223)
T ss_pred             HHHHHHHHHHhCChHHHHHHHHhhcCCHHHHHHHHhccCCcHHHHHHHHHHhcccHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999997

>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]

Probab=99.95  E-value=2.9e-27  Score=183.89  Aligned_cols=150  Identities=19%  Similarity=0.333  Sum_probs=135.9

Q ss_pred             hhhhHHHHHHHHHHHHHHH---hcccCchHHHHHHHHhh-----hhhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHh
Q 030278            5 FDLVRFSMVICRAVAYIPL---TILAVPASVLTLGGGYL-----FGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISK   76 (180)
Q Consensus         5 ~~~~~~~~~~~f~~~~~~~---~~~~~P~~~~~~~~G~~-----~g~~~~~l~~~~g~~lg~~~~y~igr~~~~~~~~~~   76 (180)
                      ++...+....+|...+.+.   ..+|+|+++++..+|++     .+++...+.+++|+++||.++|++||+.|++..+++
T Consensus        10 ~~~~~~~~~~~f~~~f~e~~l~~~~~lPge~iL~~~G~l~~~g~~~~~~~i~~~~lga~lGd~i~Y~iGr~~G~~~l~~~   89 (208)
T COG0586          10 IQEGSLGYLGVFLILFLESGLLVGPPLPGEVLLLLAGALAAQGKLNLWLVILVATLGALLGDLISYWIGRRFGRKLLRKL   89 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhh
Confidence            3344688888999999887   77899999999999998     458899999999999999999999999999888766


Q ss_pred             hc----CchHHHHHHHHHHccchhhhHHHhhcCCCChhHHHHHhhccCCChhhHHHHHHHhhHHHHHHHHHHHhhhcccc
Q 030278           77 LK----DYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLS  152 (180)
Q Consensus        77 ~~----~~~~~~~~~~~~~~~g~~~~~l~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~ig~~~~~~~~~~~G~~~~~~~  152 (180)
                      .+    ++++++|.|++++|||.++++++||+|++++. +++.||++|||+++|...|++|+++|+.++++.|+.+++..
T Consensus        90 ~~~~~~~~~~l~~a~~~f~r~G~~~vf~~RFip~vRt~-ip~~AG~~~m~~~~F~~~n~~ga~iW~~~~~~lGy~~G~~~  168 (208)
T COG0586          90 WSYRLLKRKKLDKAELLFERHGLFAIFLGRFIPGVRTL-VPIVAGMSKMPLRRFLLYNILGALLWALVLTLLGYLLGEVI  168 (208)
T ss_pred             hhhccCCHHHHHHHHHHHHHcCchhhhhhcccchhHhh-hhHhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence            55    46789999999999999999999999999885 99999999999999999999999999999999999999877


Q ss_pred             ccc
Q 030278          153 DVT  155 (180)
Q Consensus       153 ~~~  155 (180)
                      +..
T Consensus       169 ~~~  171 (208)
T COG0586         169 DVL  171 (208)
T ss_pred             HHH
Confidence            643

>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins

Probab=99.93  E-value=3.6e-25  Score=158.13  Aligned_cols=120  Identities=36%  Similarity=0.686  Sum_probs=111.3

Q ss_pred             CchHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhcCchHHHH---HHHHHHccchhhhHHHhhc
Q 030278           28 VPASVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYPQFRS---VALAIQRSGFKIVLLLRLV  104 (180)
Q Consensus        28 ~P~~~~~~~~G~~~g~~~~~l~~~~g~~lg~~~~y~igr~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~l~r~~  104 (180)
                      +|++++++++|.++|++.+++++++|+++|+.++|+++|+.+++..+++..++++.++   .++.++|||.+.+++.|++
T Consensus         1 iP~~~~~~~~g~~~g~~~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~   80 (123)
T PF09335_consen    1 IPGSILLIAAGALFGPWLGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKLRKKKRIKRIERIERWFQKYGFWVLFLSRFI   80 (123)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            5999999999999999999999999999999999999999997777776665555555   8889999999999999999


Q ss_pred             CCCChhHHHHHhhccCCChhhHHHHHHHhhHHHHHHHHHHHhh
Q 030278          105 PLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTT  147 (180)
Q Consensus       105 P~~p~~~~~~~aG~~~~~~~~f~~~~~ig~~~~~~~~~~~G~~  147 (180)
                      |++|.+++|+++|++|+|+++|+.++.+|.+||+.+++++|+.
T Consensus        81 P~~P~~~~~~~ag~~~~~~~~f~~~~~~g~~~~~~~~~~~G~~  123 (123)
T PF09335_consen   81 PGLPFDVVNYLAGITRMPFRRFFLASLIGKLPWTILYVLLGYL  123 (123)
T ss_pred             HHccHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999973

The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].

>PRK10847 hypothetical protein; Provisional

Probab=99.93  E-value=5.7e-25  Score=172.36  Aligned_cols=147  Identities=16%  Similarity=0.227  Sum_probs=125.2

Q ss_pred             hhhhHHH-HHHHHHHHHHHH---hcccCchHHHHHHHHhhhh-------hHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Q 030278            5 FDLVRFS-MVICRAVAYIPL---TILAVPASVLTLGGGYLFG-------LPVGFVADSIGATIGAGAAFLLGRTIGKPFV   73 (180)
Q Consensus         5 ~~~~~~~-~~~~f~~~~~~~---~~~~~P~~~~~~~~G~~~g-------~~~~~l~~~~g~~lg~~~~y~igr~~~~~~~   73 (180)
                      +++++.+ ..++|+..+.+.   ..+++|++++.+++|.+.+       ++..++.+++|+++||.++|++||+.|++..
T Consensus        22 ~~~~g~~~y~~lfl~~~le~~~~~~~~lPge~~l~~~G~la~~~~~~~~~~~~~~~a~~Ga~lG~~i~Y~lGr~~G~~~l  101 (219)
T PRK10847         22 VAQYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLPTNDLNVHMMVALMLIAAIVGDAVNYTIGRLFGEKLF  101 (219)
T ss_pred             HHHhhHHHHHHHHHHHHHHhccccCCCCCchHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHh
Confidence            3444543 455888888876   4467899999999998743       5678999999999999999999999999877


Q ss_pred             HHh---hcCchHHHHHHHHHHccchhhhHHHhhcCCCChhHHHHHhhccCCChhhHHHHHHHhhHHHHHHHHHHHhhhcc
Q 030278           74 ISK---LKDYPQFRSVALAIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKD  150 (180)
Q Consensus        74 ~~~---~~~~~~~~~~~~~~~~~g~~~~~l~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~ig~~~~~~~~~~~G~~~~~  150 (180)
                      +++   ..++++++|.+++++|||.+.+++.|++|++|.. +|+.+|++|||+++|+..+.+|+++|+..++.+|+.+++
T Consensus       102 ~~~~~~~~~~~~l~~~~~~~~r~G~~~v~i~RfiP~~R~~-~~~~aG~~~m~~~~F~~~~~lg~~~W~~~~~~~Gy~~g~  180 (219)
T PRK10847        102 SNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTF-APFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGT  180 (219)
T ss_pred             hccccccCCHHHHHHHHHHHHHcCCEEEEeeCCccchHhH-HHHHhHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            532   2235678999999999999999999999988865 999999999999999999999999999999999999987


Q ss_pred             cc
Q 030278          151 LS  152 (180)
Q Consensus       151 ~~  152 (180)
                      ..
T Consensus       181 ~~  182 (219)
T PRK10847        181 LP  182 (219)
T ss_pred             CH
Confidence            54

>COG1238 Predicted membrane protein [Function unknown]

Probab=99.74  E-value=1.8e-16  Score=117.82  Aligned_cols=141  Identities=19%  Similarity=0.223  Sum_probs=120.9

Q ss_pred             hhHHHHHHHHHHHHHHHhcccCchHHHHHHHHhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhc-CchHHH
Q 030278            7 LVRFSMVICRAVAYIPLTILAVPASVLTLGGGYL-FGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLK-DYPQFR   84 (180)
Q Consensus         7 ~~~~~~~~~f~~~~~~~~~~~~P~~~~~~~~G~~-~g~~~~~l~~~~g~~lg~~~~y~igr~~~~~~~~~~~~-~~~~~~   84 (180)
                      .+......+|+..|++.+++|+|+|++....-.. .++|.-.+++++|+++|+.++|++||...+...+++.. ++++.+
T Consensus        14 ~~~~a~~~Lf~vaF~eat~lP~~sE~~l~~m~~~~~~~~~~~~vAt~gs~lG~~~~y~lG~~~~~~~~~~~~~~~~~~~~   93 (161)
T COG1238          14 SQAYAYAGLFIVAFLEATLLPVPSEVLLAPMLLLGLNAWILALVATLGSVLGGLVNYALGRFLPEFIARRWFPGSEEALE   93 (161)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHcCCchHHHHHHHHHHhhHhHHHHHHHHhcchHHHHHHhhcchHHHHH
Confidence            5678889999999999999999999865433332 78999999999999999999999999998776655443 356777


Q ss_pred             HHHH-HHHccchhhhHHHhhcCCCChhHHHHHhhccCCChhhHHHHHHHhhHHHHHHHHHHHhhhc
Q 030278           85 SVAL-AIQRSGFKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLK  149 (180)
Q Consensus        85 ~~~~-~~~~~g~~~~~l~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~ig~~~~~~~~~~~G~~~~  149 (180)
                      +.++ +.+|+|.+.+++.=+-| +| |+++.++|..|+|+.+|+....+|+..+....+++....+
T Consensus        94 ~~~~~~~~ryg~~~ll~s~lp~-ig-d~~t~~aG~~~~~~~~f~~~~~igk~~Ry~~la~~~~~~~  157 (161)
T COG1238          94 KLQEKWYRRYGVWTLLLSWLPP-IG-DVLTLLAGWLRLNFLPFILLVFLGKAARYLLLAALTLLGG  157 (161)
T ss_pred             HHHHHHHHHHHHHHHHHHhccc-cc-hHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            7776 88999999999998877 88 8899999999999999999999999999999888877554

>KOG3140 consensus Predicted membrane protein [Function unknown]

Probab=99.61  E-value=4.4e-15  Score=118.94  Aligned_cols=158  Identities=27%  Similarity=0.478  Sum_probs=134.7

Q ss_pred             chhhhhHHHHHHHHHHHHHHHhcccCch-HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhhcCch
Q 030278            3 RCFDLVRFSMVICRAVAYIPLTILAVPA-SVLTLGGGYLFGLPVGFVADSIGATIGAGAAFLLGRTIGKPFVISKLKDYP   81 (180)
Q Consensus         3 ~~~~~~~~~~~~~f~~~~~~~~~~~~P~-~~~~~~~G~~~g~~~~~l~~~~g~~lg~~~~y~igr~~~~~~~~~~~~~~~   81 (180)
                      ++.+++.......|++.+.....+.+|| ....+.+|.+||.|.|.++++.....|++.+|.+.+..+|+++.++++++.
T Consensus        87 ~y~~~~~a~~~~~~~~~y~f~qtfaipG~~fls~~aG~l~~~~~g~~Lv~~~~~~ga~~cy~lS~~f~r~~v~~l~p~~~  166 (275)
T KOG3140|consen   87 KYKATYFAAVLLGFIAAYVFLQTFAIPGSIFLSLLAGALFGVFKGVLLVCLLSTLGASLCYLLSKLFGRPLVLKLFPDKI  166 (275)
T ss_pred             HHHhhhHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHhhccceEEeeeeeccchhHHHHHHHHHHHhHHHHHHHhHHHH
Confidence            3456677788889999999999999996 458899999999999999999999999999999999999999998887643


Q ss_pred             HHHHHHHHHHccc-hhhhHHHhhcCCCChhHHHHHhhccCCChhhHHHHHHHhhHHHHHHHHHHHhhhccccccccCCcc
Q 030278           82 QFRSVALAIQRSG-FKIVLLLRLVPLLPFNMLNYLLSVTPVPLLEYMLASWIGMMPITLALVYVGTTLKDLSDVTHGWNE  160 (180)
Q Consensus        82 ~~~~~~~~~~~~g-~~~~~l~r~~P~~p~~~~~~~aG~~~~~~~~f~~~~~ig~~~~~~~~~~~G~~~~~~~~~~~~~~~  160 (180)
                      +.-+..-..+|++ +..+...|..|+.|+.+.|+++++.+++.+.|+++++.|.+|.+.++.-.|+..+++.+..+..+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~lrlsp~~pnw~~n~~spvl~Vp~~~f~~~~~~gl~p~s~i~v~ags~l~~l~s~~~~~~~  246 (275)
T KOG3140|consen  167 AFLQQDVELNRNSLLNYMLFLRLSPFLPNWVINIVSPVLGVPLRIFFIGTFKGLIPYSFIEVRAGSTLASLTSASDAFSW  246 (275)
T ss_pred             HHHHHHHHhcccchhhhhhhhhhccCCHHHHHHHHHHhhccchHHHHHHHHHhcCchHHHHhhccchHhhhcccccccCC
Confidence            3333333344555 666899999999999999999999999999999999999999999999999988887776654443

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=97.70  E-value=0.0011  Score=47.22  Aligned_cols=98  Identities=16%  Similarity=0.131  Sum_probs=71.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHhhcC-chHHHHHHHHHHccchhhhHHHhhcCCCC---hhH
Q 030278           41 FGLPVGFVADSIGATIGAGAAFLLGRTIGKP-----FVISKLKD-YPQFRSVALAIQRSGFKIVLLLRLVPLLP---FNM  111 (180)
Q Consensus        41 ~g~~~~~l~~~~g~~lg~~~~y~igr~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~g~~~~~l~r~~P~~p---~~~  111 (180)
                      .+++...+.+.+|+++.....+..-++.-+-     ..++..++ +++.+|-++..||+|+..+.+.-.+| .|   ...
T Consensus        14 l~p~~~~~~~~lGN~l~vp~i~~~~~~i~~~l~~~~~~~~~~~~~~~k~~~~~~~i~kyg~~GL~lFVaIP-lP~TG~wt   92 (121)
T PF06695_consen   14 LPPWEAFLLAFLGNILPVPFILLFLDKILKWLKRKPWLKKFYEWLEKKAEKKSKKIEKYGFWGLALFVAIP-LPGTGAWT   92 (121)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC-CCcchHHH
Confidence            5688999999999998877776666655331     11111111 23556677888999999888877777 55   455


Q ss_pred             HHHHhhccCCChhhHHHHHHHhhHHHHH
Q 030278          112 LNYLLSVTPVPLLEYMLASWIGMMPITL  139 (180)
Q Consensus       112 ~~~~aG~~~~~~~~f~~~~~ig~~~~~~  139 (180)
                      -+.++-+.+++.++=+.+..+|.+....
T Consensus        93 gal~a~llg~~~~~~~~ai~~Gv~ia~~  120 (121)
T PF06695_consen   93 GALIASLLGMDKKKAFLAIFLGVLIAGV  120 (121)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHh
Confidence            7888889999999999999999887654

>PRK01844 hypothetical protein; Provisional

Probab=89.76  E-value=1.9  Score=27.71  Aligned_cols=33  Identities=12%  Similarity=0.325  Sum_probs=25.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Q 030278           43 LPVGFVADSIGATIGAGAAFLLGRTIGKPFVIS   75 (180)
Q Consensus        43 ~~~~~l~~~~g~~lg~~~~y~igr~~~~~~~~~   75 (180)
                      .|...++..++..+|...+|+++|+.-++-+++
T Consensus         3 ~~~~I~l~I~~li~G~~~Gff~ark~~~k~lk~   35 (72)
T PRK01844          3 IWLGILVGVVALVAGVALGFFIARKYMMNYLQK   35 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456667778888999999999999886554443

>PRK00523 hypothetical protein; Provisional

Probab=88.54  E-value=2.5  Score=27.18  Aligned_cols=32  Identities=6%  Similarity=0.038  Sum_probs=23.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH
Q 030278           44 PVGFVADSIGATIGAGAAFLLGRTIGKPFVIS   75 (180)
Q Consensus        44 ~~~~l~~~~g~~lg~~~~y~igr~~~~~~~~~   75 (180)
                      +..+++..++..+|...+|+++|+.-++-+++
T Consensus         5 ~l~I~l~i~~li~G~~~Gffiark~~~k~l~~   36 (72)
T PRK00523          5 GLALGLGIPLLIVGGIIGYFVSKKMFKKQIRE   36 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44556667778889999999999886654443

>COG2839 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=85.55  E-value=11  Score=27.85  Aligned_cols=57  Identities=16%  Similarity=0.172  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHhcccCchHHHHHHHHhhhh----------hHHHHHHHHHHHHHHHH-HHHHHHHHhCh
Q 030278           14 ICRAVAYIPLTILAVPASVLTLGGGYLFG----------LPVGFVADSIGATIGAG-AAFLLGRTIGK   70 (180)
Q Consensus        14 ~~f~~~~~~~~~~~~P~~~~~~~~G~~~g----------~~~~~l~~~~g~~lg~~-~~y~igr~~~~   70 (180)
                      .+|++-++....+.+|+..+..++-..++          +|....+.++-.+..|. .++|-.|++|.
T Consensus        11 al~lvg~vGlv~PaiPs~lli~~G~l~y~~gf~~~~s~~f~~v~~lvtlli~~aD~vA~~~g~kr~Gg   78 (160)
T COG2839          11 ALFLVGFVGLVYPAIPSTLLIFAGFLAYGFGFQIYLSGVFWLVMALVTLLIIAADYVANIWGVKRYGG   78 (160)
T ss_pred             HHHHHHHHhhhhcccchHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCC
Confidence            56777777777777998888776644443          45545555555555444 44555555543

>PF07155 ECF-ribofla_trS: ECF-type riboflavin transporter, S component; InterPro: IPR009825 This family consists of several bacterial proteins of around 180 residues in length that appear to be multi-pass membrane proteins

Probab=85.15  E-value=4.5  Score=29.92  Aligned_cols=32  Identities=25%  Similarity=0.398  Sum_probs=28.7

Q ss_pred             hHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 030278           30 ASVLTLGGGYLFGLPVGFVADSIGATIGAGAA   61 (180)
Q Consensus        30 ~~~~~~~~G~~~g~~~~~l~~~~g~~lg~~~~   61 (180)
                      ++...+++|.++||..|.+...+|..++|.+.
T Consensus        38 ~~~~i~l~~~l~Gp~~G~ivg~ig~~l~dll~   69 (169)
T PF07155_consen   38 GSIPIILAGLLFGPKYGAIVGAIGDLLSDLLS   69 (169)
T ss_pred             hhHHHHHHHHHHChHHHHHHHHHHHHHHHHhC
Confidence            46788999999999999999999999998844

The function of this family is unknown.; GO: 0016020 membrane

>PRK11677 hypothetical protein; Provisional

Probab=84.20  E-value=2.5  Score=30.61  Aligned_cols=25  Identities=16%  Similarity=0.081  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhChH
Q 030278           47 FVADSIGATIGAGAAFLLGRTIGKP   71 (180)
Q Consensus        47 ~l~~~~g~~lg~~~~y~igr~~~~~   71 (180)
                      .+++.+|.++|..++|+++|...++
T Consensus         3 W~~a~i~livG~iiG~~~~R~~~~~   27 (134)
T PRK11677          3 WEYALIGLVVGIIIGAVAMRFGNRK   27 (134)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccch
Confidence            3566788888999999999986543

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00