Citrus Sinensis ID: 030321

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18

MLPELSGKLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSLLMGSTKEWKSRNSSPIVSADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGCVDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSENIIPSEVTSWKNVNT

cccccccccccEEccEEEEEEEcccccccccccccccccccEEEEEEcccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHccccccccEEcEEEEEEccccccccccccEEEEccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHccccccccccccccccccc

cccHHcccccccccEEEEEEEEccccccccccccccccccccEEEcccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEccccccccccccEEEEccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHcccHcccHHHHHHHHccc

mlpelsgklplrtcrgviahmqlpdfigeyypdhgpsilsdAWLAVQGSRsllmgstkewksrnsspivsADEASKALEELLPKAsaiypgmknwsftgaraglralppmtpngsppllgcvdnlvgTTHACKYWlfgglgsrgllyhgwFGKLVAQAVLACseniipsevtswknvnt

mlpelsgklplRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSLLMgstkewksrnsspIVSADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGCVDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSeniipsevtswknvnt

MLPELSGKLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSLLMGSTKEWKSRNSSPIVSADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGCVDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSENIIPSEVTSWKNVNT

********LPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSL********************************ASAIYPGMKNWSFTGARAGLRAL*********PLLGCVDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSENIIPSEVT*******

MLPELSGKLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSLLMGSTKEWKSRNSSPIVSADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGCVDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSENIIPSEVTSWKNVN*

MLPELSGKLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSLLMG**************SADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGCVDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSENIIPSEV********

MLPELSGKLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSLLMGSTKEWKSRNSSPIVSADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGCVDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSENIIPSEVTSWKNVNT

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MLPELSGKLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSLLMGSTKEWKSRNSSPIVSADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGCVDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSENIIPSEVTSWKNVNT

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		179
147811104		1162	hypothetical protein VITISV_037256 [Viti	0.977	0.150	0.771	4e-76
255565075		426	oxidoreductase, putative [Ricinus commun	0.994	0.417	0.758	1e-75
296084591		474	unnamed protein product [Vitis vinifera]	0.977	0.369	0.771	1e-74
225462992		450	PREDICTED: uncharacterized protein LOC10	0.977	0.388	0.771	1e-74
224143999		421	predicted protein [Populus trichocarpa]	0.994	0.422	0.735	8e-73
356556617		449	PREDICTED: uncharacterized protein LOC10	0.966	0.385	0.721	8e-69
449457993		431	PREDICTED: uncharacterized protein LOC10	0.988	0.410	0.694	9e-64
42570301		420	FAD-dependent oxidoreductase-like protei	0.977	0.416	0.668	2e-63
52354267		420	hypothetical protein AT2G22650 [Arabidop	0.977	0.416	0.668	2e-63
4314362		371	putative D-amino acid dehydrogenase [Ara	0.983	0.474	0.664	2e-63

>gi\|147811104\|emb\|CAN74564.1\| hypothetical protein VITISV_037256 [Vitis vinifera]	Back alignment and taxonomy information

 Score =  288 bits (738), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 135/175 (77%), Positives = 156/175 (89%)

Query: 1    MLPELSGKLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSLLMGSTKEW 60
            MLPELSG+LPLRTCRGVIAH+QLPD IGE Y DH PSILSDAWLA+QG RSL MGST EW
Sbjct: 983  MLPELSGRLPLRTCRGVIAHLQLPDNIGEDYSDHSPSILSDAWLAIQGPRSLYMGSTWEW 1042

Query: 61   KSRNSSPIVSADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLG 120
            KSRN  P VSA+EA+KAL+ELLPKASAIYPG+K+W+F GARAGLRA+PP+TP+GS PLLG
Sbjct: 1043 KSRNYLPNVSAEEATKALQELLPKASAIYPGIKDWTFAGARAGLRAMPPLTPHGSLPLLG 1102

Query: 121  CVDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSENIIPSEVTSWK 175
            C+++LVG  H CKYWLFGGLGSRGLLYHG  GKL+AQAVL  +E++IPSE+TSW+
Sbjct: 1103 CINDLVGGNHTCKYWLFGGLGSRGLLYHGXLGKLIAQAVLLGNEDLIPSELTSWR 1157

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255565075\|ref\|XP_002523530.1\| oxidoreductase, putative [Ricinus communis] gi\|223537237\|gb\|EEF38869.1\| oxidoreductase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|296084591\|emb\|CBI25612.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225462992\|ref\|XP_002264438.1\| PREDICTED: uncharacterized protein LOC100248232 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224143999\|ref\|XP_002325152.1\| predicted protein [Populus trichocarpa] gi\|222866586\|gb\|EEF03717.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356556617\|ref\|XP_003546620.1\| PREDICTED: uncharacterized protein LOC100780699 [Glycine max]	Back alignment and taxonomy information

>gi\|449457993\|ref\|XP_004146732.1\| PREDICTED: uncharacterized protein LOC101203097 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|42570301\|ref\|NP_850027.2\| FAD-dependent oxidoreductase-like protein [Arabidopsis thaliana] gi\|55740569\|gb\|AAV63877.1\| hypothetical protein [Arabidopsis thaliana] gi\|330252239\|gb\|AEC07333.1\| FAD-dependent oxidoreductase-like protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|52354267\|gb\|AAU44454.1\| hypothetical protein AT2G22650 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|4314362\|gb\|AAD15573.1\| putative D-amino acid dehydrogenase [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		179
TAIR\|locus:2066060		420	AT2G22650 [Arabidopsis thalian	0.972	0.414	0.672	1.8e-62

TAIR\|locus:2066060 AT2G22650 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 117/174 (67%), Positives = 141/174 (81%)

Query:     2 LPELSGKLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSLLMGSTKEWK 61
             LP L+GKLPLRTCRGVI HMQL +     YPD GPSILSDAWLAVQG R+L MGST EW+
Sbjct:   243 LPGLTGKLPLRTCRGVITHMQLHESARGSYPDDGPSILSDAWLAVQGPRNLHMGSTWEWQ 302

Query:    62 SRNSSPIVSADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGC 121
             SRN S  V A+EAS+AL ELLPKASA+YP ++ W F GARAGLRA+PP+T +GS PLLGC
Sbjct:   303 SRNYSSDVPAEEASRALNELLPKASAVYPDIEKWEFAGARAGLRAMPPVTSHGSLPLLGC 362

Query:   122 VDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSENIIPSEVTSWK 175
             V+ L+G    C +W+F GLGSRGLLYH W GKL+++AVL+C+E ++PSE+TSWK
Sbjct:   363 VNQLIGAGQFCNFWVFSGLGSRGLLYHAWLGKLMSKAVLSCNEELLPSELTSWK 416


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      179       179   0.00089  109 3  11 22  0.45    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  184 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.96u 0.10s 18.06t   Elapsed:  00:00:01
  Total cpu time:  17.96u 0.10s 18.06t   Elapsed:  00:00:01
  Start:  Fri May 10 19:33:06 2013   End:  Fri May 10 19:33:07 2013

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		179
COG0665		387	COG0665, DadA, Glycine/D-amino acid oxidases (deam	2e-07
TIGR02352		337	TIGR02352, thiamin_ThiO, glycine oxidase ThiO	4e-06

>gnl\|CDD\|223737 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	Back alignment and domain information

 Score = 49.5 bits (118), Expect = 2e-07
 Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 16/156 (10%)

Query: 8   KLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSD--AWLAVQGSRSLLMGSTKEWKSRNS 65
            LPLR  RG     + P+ +          ++ D   ++  +G   L +G T E    + 
Sbjct: 223 PLPLRPVRGQALTTEPPEGLLADGLAPVVLVVDDGGGYIRPRGDGRLRVGGTDEEGGDDP 282

Query: 66  SPIVSADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGCVDNL 125
           S     D     + ELL  A A+ PG+ +     A AGLR  PP TP+G P        +
Sbjct: 283 SDPEREDLV---IAELLRVARALLPGLADAGIEAAWAGLR--PPTTPDGLP--------V 329

Query: 126 VGTTHACK-YWLFGGLGSRGLLYHGWFGKLVAQAVL 160
           +G        ++  G G  G       G+L+A  +L
Sbjct: 330 IGRAAPLPNLYVATGHGGHGFTLAPALGRLLADLIL 365

Length = 387

>gnl\|CDD\|233831 TIGR02352, thiamin_ThiO, glycine oxidase ThiO	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		179
TIGR03197		381	MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouri	99.9
PRK01747		662	mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans	99.88
TIGR02352		337	thiamin_ThiO glycine oxidase ThiO. This family con	99.88
PRK00711		416	D-amino acid dehydrogenase small subunit; Validate	99.86
TIGR01373		407	soxB sarcosine oxidase, beta subunit family, heter	99.85
COG0665		387	DadA Glycine/D-amino acid oxidases (deaminating) [	99.83
PRK11259		376	solA N-methyltryptophan oxidase; Provisional	99.83
TIGR01377		380	soxA_mon sarcosine oxidase, monomeric form. Sarcos	99.81
PRK12409		410	D-amino acid dehydrogenase small subunit; Provisio	99.8
TIGR03329		460	Phn_aa_oxid putative aminophosphonate oxidoreducta	99.77
TIGR03364		365	HpnW_proposed FAD dependent oxidoreductase TIGR033	99.7
PF01266		358	DAO: FAD dependent oxidoreductase; InterPro: IPR00	99.69
KOG2853		509	consensus Possible oxidoreductase [General functio	99.61
KOG3923		342	consensus D-aspartate oxidase [Amino acid transpor	99.57
PRK11728		393	hydroxyglutarate oxidase; Provisional	99.38
TIGR03377		516	glycerol3P_GlpA glycerol-3-phosphate dehydrogenase	99.34
PRK11101		546	glpA sn-glycerol-3-phosphate dehydrogenase subunit	99.32
KOG2844		856	consensus Dimethylglycine dehydrogenase precursor	99.3
PRK13369		502	glycerol-3-phosphate dehydrogenase; Provisional	98.99
PLN02464		627	glycerol-3-phosphate dehydrogenase	98.98
PRK12266		508	glpD glycerol-3-phosphate dehydrogenase; Reviewed	98.97
KOG2852		380	consensus Possible oxidoreductase [General functio	98.96
KOG2820		399	consensus FAD-dependent oxidoreductase [General fu	98.93
COG0578		532	GlpA Glycerol-3-phosphate dehydrogenase [Energy pr	97.3
COG0579		429	Predicted dehydrogenase [General function predicti	96.45
KOG2665		453	consensus Predicted FAD-dependent oxidoreductase [	92.61
KOG0042		680	consensus Glycerol-3-phosphate dehydrogenase [Ener	90.71
TIGR02032		295	GG-red-SF geranylgeranyl reductase family. This mo	88.1
TIGR02733		492	desat_CrtD C-3',4' desaturase CrtD. Members of thi	85.46

>TIGR03197 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain	Back alignment and domain information

Probab=99.90  E-value=4.2e-23  Score=174.33  Aligned_cols=139  Identities=22%  Similarity=0.399  Sum_probs=111.7

Q ss_pred             CCCceecceeEEEEeCCCCCCCCCCCCCCccccCeeEEec-CCCeEEEeeccCCCCCCCCCccChHHHHHHHHHHHHHHh
Q 030321            8 KLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQ-GSRSLLMGSTKEWKSRNSSPIVSADEASKALEELLPKAS   86 (179)
Q Consensus         8 ~lpl~p~rGq~~~~~~~~~~~~~~p~~~~~i~~~~y~~~~-~g~~~~iG~t~e~~~~~~~~~~~~~~~~~~~~~l~~~~~   86 (179)
                      .+||.|+|||+++++++... ...+..   +..+.|+.+. ++. +++|+|++..  ..+..++    ....+.+++++.
T Consensus       198 ~~pi~p~rg~~~~~~~~~~~-~~~~~~---~~~~~y~~p~~~g~-~~iG~t~~~~--~~~~~~~----~~~~~~~~~~~~  266 (381)
T TIGR03197       198 HLPLRPVRGQVSHLPATEAL-SALKTV---LCYDGYLTPANNGE-HCIGASYDRN--DDDLALR----EADHAENLERLA  266 (381)
T ss_pred             cCCccccccceeeccCCCcc-cccCce---EeCCceecccCCCc-eEeecccCCC--CCCCCcC----HHHHHHHHHHHH
Confidence            58999999999999764311 111211   2234588876 554 9999998874  3455556    566788899999


Q ss_pred             ccCCCCC-----CceeeeeeEEEeecCCCCCCCCCceeeccCC-------------------------CCCCcccCcEEE
Q 030321           87 AIYPGMK-----NWSFTGARAGLRALPPMTPNGSPPLLGCVDN-------------------------LVGTTHACKYWL  136 (179)
Q Consensus        87 ~~~P~l~-----~~~i~~~w~G~R~~tp~~~~D~~PiiG~~~~-------------------------~~~~~~~~~l~~  136 (179)
                      +++|.++     +.++.+.|+|+|++||    |++|+||++|+                         .+      |+|+
T Consensus       267 ~~~P~l~~~~~~~~~~~~~~~G~r~~t~----D~~Piig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g~~~  336 (381)
T TIGR03197       267 ECLPALAWASEVDISALQGRVGVRCASP----DHLPLVGAVPDFEAIKEAYAELAKDKNRPIAEPAPYYP------GLYV  336 (381)
T ss_pred             HhCcccchhhccCccccCceEEEeccCC----CcCccCCCCCCHHHHHHHHHHhcccccccccccCCCCC------CeEE
Confidence            9999987     7899999999999999    99999999987                         55      9999


Q ss_pred             EeecCCcchhHHHHHHHHHHHHHHcCCCCCC
Q 030321          137 FGGLGSRGLLYHGWFGKLVAQAVLACSENII  167 (179)
Q Consensus       137 ~~G~g~~G~~~ap~~g~~lA~~i~~~~~~~~  167 (179)
                      ++||+|+||++||++|++||++|++++.+..
T Consensus       337 a~G~~g~G~~~ap~~g~~la~~i~~~~~~~~  367 (381)
T TIGR03197       337 LGGLGSRGLTSAPLAAEILAAQICGEPLPLE  367 (381)
T ss_pred             EecccchHHHHHHHHHHHHHHHHhCCCCCCc
Confidence            9999999999999999999999998876543

In Escherichia coli, the protein previously designated YfcK is now identified as the bifunctional enzyme MnmC. It acts, following the action of the heterotetramer of GidA and MnmE, in the modification of U-34 of certain tRNA to 5-methylaminomethyl-2-thiouridine (mnm5s2U). In other bacterial, the corresponding proteins are usually but always found as a single polypeptide chain, but occasionally as the product of tandem genes. This model represents the C-terminal region of the multifunctional protein.

>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed	Back alignment and domain information

>TIGR02352 thiamin_ThiO glycine oxidase ThiO	Back alignment and domain information

>PRK00711 D-amino acid dehydrogenase small subunit; Validated	Back alignment and domain information

>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form	Back alignment and domain information

>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	Back alignment and domain information

>PRK11259 solA N-methyltryptophan oxidase; Provisional	Back alignment and domain information

>TIGR01377 soxA_mon sarcosine oxidase, monomeric form	Back alignment and domain information

>PRK12409 D-amino acid dehydrogenase small subunit; Provisional	Back alignment and domain information

>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase	Back alignment and domain information

>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364	Back alignment and domain information

>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1	Back alignment and domain information

>KOG2853 consensus Possible oxidoreductase [General function prediction only]	Back alignment and domain information

>KOG3923 consensus D-aspartate oxidase [Amino acid transport and metabolism]	Back alignment and domain information

>PRK11728 hydroxyglutarate oxidase; Provisional	Back alignment and domain information

>TIGR03377 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase, anaerobic, A subunit	Back alignment and domain information

>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional	Back alignment and domain information

>KOG2844 consensus Dimethylglycine dehydrogenase precursor [Amino acid transport and metabolism]	Back alignment and domain information

>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional	Back alignment and domain information

>PLN02464 glycerol-3-phosphate dehydrogenase	Back alignment and domain information

>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed	Back alignment and domain information

>KOG2852 consensus Possible oxidoreductase [General function prediction only]	Back alignment and domain information

>KOG2820 consensus FAD-dependent oxidoreductase [General function prediction only]	Back alignment and domain information

>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	Back alignment and domain information

>COG0579 Predicted dehydrogenase [General function prediction only]	Back alignment and domain information

>KOG2665 consensus Predicted FAD-dependent oxidoreductase [Function unknown]	Back alignment and domain information

>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	Back alignment and domain information

>TIGR02032 GG-red-SF geranylgeranyl reductase family	Back alignment and domain information

>TIGR02733 desat_CrtD C-3',4' desaturase CrtD	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		179
1ryi_A		382	Glycine oxidase; flavoprotein, protein-inhibitor c	8e-07
3pvc_A		689	TRNA 5-methylaminomethyl-2-thiouridine biosynthes	1e-04
3ps9_A		676	TRNA 5-methylaminomethyl-2-thiouridine biosynthes	9e-04

>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A* Length = 382	Back alignment and structure

 Score = 46.8 bits (112), Expect = 8e-07
 Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 23/154 (14%)

Query: 8   KLPLRTCRGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSR-SLLMGSTKEWKSRNSS 66
                  +G    +   D           ++  D    V      L++G+T +    + +
Sbjct: 229 NNAFLPVKGECLSVWNDD------IPLTKTLYHDHCYIVPRKSGRLVVGATMKPGDWSET 282

Query: 67  PIVSADEASKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGCVDNLV 126
           P          LE ++ KA  + P ++N       AGLR   P T +G  P +G      
Sbjct: 283 P--DLG----GLESVMKKAKTMLPAIQNMKVDRFWAGLR---PGTKDGK-PYIGRHPEDS 332

Query: 127 GTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVL 160
               A       G    G+L     G L++  ++
Sbjct: 333 RILFAA------GHFRNGILLAPATGALISDLIM 360

PyMOL of 1ryi

>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A* Length = 689	Back alignment and structure

>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A* Length = 676	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		179
3nyc_A		381	D-arginine dehydrogenase; FAD, imino-arginine, oxi	99.9
3pvc_A		689	TRNA 5-methylaminomethyl-2-thiouridine biosynthes	99.88
3ps9_A		676	TRNA 5-methylaminomethyl-2-thiouridine biosynthes	99.87
1y56_B		382	Sarcosine oxidase; dehydrogenase, protein-protein	99.87
2gf3_A		389	MSOX, monomeric sarcosine oxidase; flavoprotein ox	99.86
3g3e_A		351	D-amino-acid oxidase; FAD, flavoprotein, oxidoredu	99.86
3axb_A		448	Putative oxidoreductase; dinucleotide-binding fold	99.85
1ryi_A		382	Glycine oxidase; flavoprotein, protein-inhibitor c	99.85
1c0p_A		363	D-amino acid oxidase; alpha-beta-alpha motif, flav	99.85
2uzz_A		372	N-methyl-L-tryptophan oxidase; N-methyltryptophan	99.83
2gag_B		405	Heterotetrameric sarcosine oxidase beta-subunit; f	99.82
2oln_A		397	NIKD protein; flavoprotein, rossmann fold, oxidore	99.81
3dme_A		369	Conserved exported protein; structural genomics, P	99.8
3dje_A		438	Fructosyl amine: oxygen oxidoreductase; fructosyl-	99.77
3c4n_A		405	Uncharacterized protein DR_0571; alpha-beta protei	99.76
1pj5_A		830	N,N-dimethylglycine oxidase; channelling, FAD bind	99.7
2qcu_A		501	Aerobic glycerol-3-phosphate dehydrogenase; glycer	99.35
2rgh_A		571	Alpha-glycerophosphate oxidase; flavoprotein oxida	99.22
3da1_A		561	Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9	99.0
3cgv_A		397	Geranylgeranyl reductase related protein; NP_39399	92.44
3nks_A		477	Protoporphyrinogen oxidase; FAD containing protein	87.56
3oz2_A		397	Digeranylgeranylglycerophospholipid reductase; str	87.41
3i6d_A		470	Protoporphyrinogen oxidase; protein-inhibitor comp	85.67
2weu_A		511	Tryptophan 5-halogenase; regioselectivity, antifun	82.57

>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*	Back alignment and structure

Probab=99.90  E-value=3.6e-23  Score=170.96  Aligned_cols=139  Identities=14%  Similarity=0.096  Sum_probs=106.9

Q ss_pred             CCceecceeEEEEeCCCCC-CCCCCCCCCccccCe-eEEecCCCeEEEeeccCCCCCCCCCccChHHHHHHHHHHHHHHh
Q 030321            9 LPLRTCRGVIAHMQLPDFI-GEYYPDHGPSILSDA-WLAVQGSRSLLMGSTKEWKSRNSSPIVSADEASKALEELLPKAS   86 (179)
Q Consensus         9 lpl~p~rGq~~~~~~~~~~-~~~~p~~~~~i~~~~-y~~~~~g~~~~iG~t~e~~~~~~~~~~~~~~~~~~~~~l~~~~~   86 (179)
                      +|+.|+|||++.++.+... ...+|....  ...+ |+.|..+ ++++|++.+......+..++    ...++++++++.
T Consensus       221 ~~~~p~rg~~~~~~~~~~~~~~~~p~~~~--~~~~~y~~p~~g-~~~ig~~~~~~~~~~~~~~~----~~~~~~~~~~~~  293 (381)
T 3nyc_A          221 LGLQPKRRSAFIFAPPPGIDCHDWPMLVS--LDESFYLKPDAG-MLLGSPANADPVEAHDVQPE----QLDIATGMYLIE  293 (381)
T ss_dssp             CCCEEEEEEEEEECCCTTCCCTTCCEEEE--TTSSCEEEEETT-EEEEECCCCEECCSSCCCCC----HHHHHHHHHHHH
T ss_pred             CceeeeEEEEEEECCCcCCCcCccceEEe--CCCCEEEEeCCC-cEEEeCCcCCCCCcccCCCC----hHHHHHHHHHHH
Confidence            6999999999999865421 111222110  1223 8888776 49999988753223444555    445567777765


Q ss_pred             ccCCCCCCceeeeeeEEEeecCCCCCCCCCceeeccCCCCCCcccCcEEEEeecCCcchhHHHHHHHHHHHHHHcCCCC
Q 030321           87 AIYPGMKNWSFTGARAGLRALPPMTPNGSPPLLGCVDNLVGTTHACKYWLFGGLGSRGLLYHGWFGKLVAQAVLACSEN  165 (179)
Q Consensus        87 ~~~P~l~~~~i~~~w~G~R~~tp~~~~D~~PiiG~~~~~~~~~~~~~l~~~~G~g~~G~~~ap~~g~~lA~~i~~~~~~  165 (179)
                      + +|.+.+.++.+.|+|+|++|+    |++|+||++|+.+      |+|+++||+|+||++||++|++||++|.+++.+
T Consensus       294 ~-~~~l~~~~~~~~w~G~r~~t~----D~~p~ig~~~~~~------~l~~a~G~~g~G~~~ap~~g~~la~~i~g~~~~  361 (381)
T 3nyc_A          294 E-ATTLTIRRPEHTWAGLRSFVA----DGDLVAGYAANAE------GFFWVAAQGGYGIQTSAAMGEASAALIRHQPLP  361 (381)
T ss_dssp             H-HBSCCCCCCSEEEEEEEEECT----TSCCEEEECTTST------TEEEEECCTTCTTTTHHHHHHHHHHHHTTCCCC
T ss_pred             h-cCCCcccceeeeeEEccccCC----CCCceecCCCCCC------CeEEEEcCCChhHhhCHHHHHHHHHHHhCCCCC
Confidence            5 577888899999999999999    9999999999888      999999999999999999999999999998766

PyMOL of 3nyc

>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*	Back alignment and structure

>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*	Back alignment and structure

>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}	Back alignment and structure

>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*	Back alignment and structure

>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*	Back alignment and structure

>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*	Back alignment and structure

>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*	Back alignment and structure

>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*	Back alignment and structure

>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}	Back alignment and structure

>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*	Back alignment and structure

>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*	Back alignment and structure

>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}	Back alignment and structure

>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*	Back alignment and structure

>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}	Back alignment and structure

>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*	Back alignment and structure

>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*	Back alignment and structure

>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*	Back alignment and structure

>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}	Back alignment and structure

>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}	Back alignment and structure

>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}	Back alignment and structure

>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}	Back alignment and structure

>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		179
d1ryia2		88	d.16.1.3 (A:219-306) Glycine oxidase ThiO {Bacillu	0.004

>d1ryia2 d.16.1.3 (A:219-306) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Length = 88	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: D-aminoacid oxidase-like
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

 Score = 33.0 bits (75), Expect = 0.004
 Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 14/97 (14%)

Query: 15  RGVIAHMQLPDFIGEYYPDHGPSILSDAWLAVQGSRSLLMGSTKEWKSRNSSPIVSADEA 74
           +G    +   D      P          ++  + S  L++G+T +    + +P +     
Sbjct: 5   KGECLSVWNDDI-----PLTKTLYHDHCYIVPRKSGRLVVGATMKPGDWSETPDL----- 54

Query: 75  SKALEELLPKASAIYPGMKNWSFTGARAGLRALPPMT 111
              LE ++ KA  + P ++N       AGLR   P T
Sbjct: 55  -GGLESVMKKAKTMLPAIQNMKVDRFWAGLR---PGT 87

PyMOL of d1ryia2

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		179
d1ryia2		88	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	99.71
d1kifa2		93	D-aminoacid oxidase {Pig (Sus scrofa) [TaxId: 9823	99.69
d1c0pa2		95	D-aminoacid oxidase {Rhodotorula gracilis [TaxId:	99.54
d1ryia1		276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	97.48
d2gf3a1		281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	97.45
d1pj5a3		119	N,N-dimethylglycine oxidase {Arthrobacter globifor	97.1
d1c0pa1		268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.9
d1kifa1		246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	93.84
d2gf3a2		104	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	83.45

>d1ryia2 d.16.1.3 (A:219-306) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: FAD-linked reductases, C-terminal domain
superfamily: FAD-linked reductases, C-terminal domain
family: D-aminoacid oxidase-like
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=99.71  E-value=2.4e-17  Score=109.61  Aligned_cols=87  Identities=21%  Similarity=0.249  Sum_probs=70.1

Q ss_pred             ceecceeEEEEeCCCCCCCCCCCCCCccccC-eeEEecCCCeEEEeeccCCCCCCCCCccChHHHHHHHHHHHHHHhccC
Q 030321           11 LRTCRGVIAHMQLPDFIGEYYPDHGPSILSD-AWLAVQGSRSLLMGSTKEWKSRNSSPIVSADEASKALEELLPKASAIY   89 (179)
Q Consensus        11 l~p~rGq~~~~~~~~~~~~~~p~~~~~i~~~-~y~~~~~g~~~~iG~t~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~   89 (179)
                      |+|+|||++.++.+...     . ...+..+ .|+.|..++.++||+|+|.  .++|..++    .+.++++++++.+++
T Consensus         1 l~PvKGq~l~v~~~~~~-----~-~~~i~~~~~yiip~~~g~~~iG~T~e~--~~~d~~~~----~~~~~~l~~~a~~~~   68 (88)
T d1ryia2           1 FLPVKGECLSVWNDDIP-----L-TKTLYHDHCYIVPRKSGRLVVGATMKP--GDWSETPD----LGGLESVMKKAKTML   68 (88)
T ss_dssp             CEEEEEEEEEEECCSSC-----C-CSEEEETTEEEEECTTSEEEEECCCEE--TCCCCSCC----HHHHHHHHHHHHHHC
T ss_pred             CCCCCcEEEEEECCCCc-----c-CCEEeCCCEEEEECCCCCEEEccEEEE--CCCCCCCC----HHHHHHHHHHHHHHC
Confidence            68999999999876421     1 1123334 4888874435999999998  47788888    889999999999999


Q ss_pred             CCCCCceeeeeeEEEeecCC
Q 030321           90 PGMKNWSFTGARAGLRALPP  109 (179)
Q Consensus        90 P~l~~~~i~~~w~G~R~~tp  109 (179)
                      |.+++++|++.|+|+||+|.
T Consensus        69 P~l~~~~v~~~waGlRP~t~   88 (88)
T d1ryia2          69 PAIQNMKVDRFWAGLRPGTK   88 (88)
T ss_dssp             GGGGGSEEEEEEEEEEEECS
T ss_pred             CCcCCCcEeEEEEeeCCCCC
Confidence            99999999999999999983

PyMOL of d1ryia2

>d1kifa2 d.16.1.3 (A:195-287) D-aminoacid oxidase {Pig (Sus scrofa) [TaxId: 9823]}	Back information, alignment and structure

>d1c0pa2 d.16.1.3 (A:1194-1288) D-aminoacid oxidase {Rhodotorula gracilis [TaxId: 5286]}	Back information, alignment and structure

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	Back information, alignment and structure

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}	Back information, alignment and structure

>d1pj5a3 d.16.1.5 (A:220-338) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}	Back information, alignment and structure

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}	Back information, alignment and structure

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}	Back information, alignment and structure

>d2gf3a2 d.16.1.3 (A:218-321) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}	Back information, alignment and structure