Citrus Sinensis ID: 030362

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MQVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Secondary Structure (PSIPRED)
cEEEEEEEEEEEEEEEEEEEccccEEEEEEEEcccccccccEEEEEEEEcccccccccccccEEEEEccccEEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEEEEccccccccEEEEEEEcccEEEEEEEEEccHHHHHHHHHHHHccEEEHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEEccccEEEEccccccccccccccccccccEEEEEEEccccccccccEccccccEEEccccccEEEEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEcccccccccEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MQVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIhdlsfgpkypgihnpldgtvrmlhdtsgtfkYYIKIvpteyryiskdvlptnqfsvTEYFSTINefdrtwpavyflydlspitvTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTkpsarsvlr
Flexible Loop (DISEMBL)
MQVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEaltkpsarsvlr
Low Complexity Region (SEG)
MQVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Disordered region (IsUnstruct)
**VYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL**********
Disordered Region (DISOPRED)
MQVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST****DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL***S******
Disordered Region (DISEMBL)
MQVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK********
Disordered Region (DISPRO)
MQVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPS******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	179	2.2.26 [Sep-21-2011]
Q66KH2	389	Endoplasmic reticulum-Gol	N/A	no	0.938	0.431	0.426	7e-35
Q6NVS2	384	Endoplasmic reticulum-Gol	yes	no	0.949	0.442	0.426	2e-34
Q4R8X1	382	Endoplasmic reticulum-Gol	N/A	no	0.949	0.445	0.426	2e-34
Q9Y282	383	Endoplasmic reticulum-Gol	yes	no	0.949	0.443	0.426	3e-34
Q5R8G3	383	Endoplasmic reticulum-Gol	yes	no	0.949	0.443	0.426	3e-34
Q5EAE0	383	Endoplasmic reticulum-Gol	yes	no	0.949	0.443	0.426	4e-34
Q9CQE7	383	Endoplasmic reticulum-Gol	yes	no	0.949	0.443	0.426	4e-34
Q803I2	383	Endoplasmic reticulum-Gol	yes	no	0.949	0.443	0.420	5e-33
Q54DW2	383	Probable endoplasmic reti	yes	no	0.938	0.438	0.379	1e-29
Q9CR89	377	Endoplasmic reticulum-Gol	no	no	0.849	0.403	0.401	3e-22

>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus laevis GN=ergic3 PE=2 SV=1

 Score =  146 bits (369), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 78/183 (42%), Positives = 109/183 (59%), Gaps = 15/183 (8%)

Query: 2   QVYGVLDVQRVAGNFH-----------ISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFG 50
           QVYG L+V +VAGNFH           + VH + I+  Q    G  N+N++H I  LSFG
Sbjct: 201 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQSF--GLDNINMTHEIKHLSFG 258

Query: 51  PKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF 110
             YPG+ NPLDGT  +   +S  F+Y++KIVPT Y  +  +VL TNQFSVT +    N  
Sbjct: 259 KDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQFSVTRHEKMTNGL 318

Query: 111 --DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEA 168
             D+  P V+ LY+LSP+ V   E+ RSF H +T +CA++GG F + G++D  +Y    A
Sbjct: 319 IGDQGLPGVFVLYELSPMMVKFTEKHRSFTHFLTGVCAIIGGVFTVAGLIDSLIYYSTRA 378

Query: 169 LTK 171
           + K
Sbjct: 379 IQK 381

Possible role in transport between endoplasmic reticulum and Golgi.
Xenopus laevis (taxid: 8355)

>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1

 Score =  145 bits (365), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 108/176 (61%), Gaps = 6/176 (3%)

Query: 2   QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
           QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPG+ 
Sbjct: 201 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHEIRHLSFGRDYPGLV 260

Query: 58  NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
           NPLDG+      +S  F+Y++KIVPT Y  +  +VL TNQFSVT +    N    D+  P
Sbjct: 261 NPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVLRTNQFSVTRHEKMTNGLIGDQGLP 320

Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
            V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct: 321 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGVFTVAGLIDSLVYYSTRAIQK 376

Possible role in transport between endoplasmic reticulum and Golgi.

Xenopus tropicalis (taxid: 8364)

>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1

 Score =  144 bits (364), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)

Query: 2   QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
           QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPGI 
Sbjct: 199 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGEDYPGIV 258

Query: 58  NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
           NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N    D+  P
Sbjct: 259 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLP 318

Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
            V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct: 319 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 374

Possible role in transport between endoplasmic reticulum and Golgi.

Macaca fascicularis (taxid: 9541)

>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Homo sapiens GN=ERGIC3 PE=1 SV=1

 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)

Query: 2   QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
           QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPGI 
Sbjct: 200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGEDYPGIV 259

Query: 58  NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
           NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N    D+  P
Sbjct: 260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLP 319

Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
            V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct: 320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Homo sapiens (taxid: 9606)

>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Pongo abelii GN=ERGIC3 PE=2 SV=1

 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)

Query: 2   QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
           QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPGI 
Sbjct: 200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGEDYPGIV 259

Query: 58  NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
           NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N    D+  P
Sbjct: 260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLP 319

Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
            V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct: 320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Pongo abelii (taxid: 9601)

>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Bos taurus GN=ERGIC3 PE=2 SV=1

 Score =  144 bits (362), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)

Query: 2   QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
           QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPGI 
Sbjct: 200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIRHLSFGEDYPGIV 259

Query: 58  NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
           NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N    D+  P
Sbjct: 260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLMGDQGLP 319

Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
            V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct: 320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Bos taurus (taxid: 9913)

>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus GN=Ergic3 PE=2 SV=1

 Score =  144 bits (362), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 6/176 (3%)

Query: 2   QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
           QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPGI 
Sbjct: 200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGEDYPGIV 259

Query: 58  NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
           NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N    D+  P
Sbjct: 260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLP 319

Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
            V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct: 320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Mus musculus (taxid: 10090)

>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1

 Score =  140 bits (352), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 105/176 (59%), Gaps = 6/176 (3%)

Query: 2   QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
           QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPGI 
Sbjct: 200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHFIKHLSFGKDYPGIV 259

Query: 58  NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
           NPLD T       S  ++Y++KIVPT Y     +V+ TNQFSVT +    N    D+  P
Sbjct: 260 NPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKTNQFSVTRHEKIANGLIGDQGLP 319

Query: 116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
            V+ LY+LSP+ V   E++RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct: 320 GVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3 SV=1

 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 106/179 (59%), Gaps = 11/179 (6%)

Query: 2   QVYGVLDVQRVAGNFHIS------VHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPG 55
           QVYG + V +VAGNFH +       H ++++  Q    G+   NVSH I+ LSFG  +PG
Sbjct: 199 QVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGS--FNVSHTINRLSFGNDFPG 256

Query: 56  IHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI---NEFDR 112
           I NPLD   +      G F+Y++K+VPT Y  ++ + + TNQ+SVTE++  +    E   
Sbjct: 257 IKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQYSVTEHYRLLAKKGEEPS 316

Query: 113 TWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
             P ++F+YDLSPI + + E  +SF   +T +CA++GG F + G+ D ++Y   + L K
Sbjct: 317 GLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVFGIFDSFIYYSTKNLQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9CR89|ERGI2_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Mus musculus GN=Ergic2 PE=2 SV=1

 Score =  104 bits (260), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 94/167 (56%), Gaps = 15/167 (8%)

Query: 2   QVYGVLDVQRVAGNFHISVHGL------NIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPG 55
           +++G L V +VAGNFHI+V         + ++A ++     + N SH I  LSFG   PG
Sbjct: 171 RIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHDSYNFSHRIDHLSFGELVPG 228

Query: 56  IHNPLDGTVRMLHDTSGTFKYYIKIVPTEYR--YISKDVLPTNQFSVTEYFSTINEFDRT 113
           I NPLDGT ++  D +  F+Y+I +VPT+     IS D   T+QFSVTE    IN    +
Sbjct: 229 IINPLDGTEKIAVDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERIINHAAGS 285

Query: 114 W--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 158
                ++  YDLS + VT+ EE   F     RLC ++GG F+ TGML
Sbjct: 286 HGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIIGGIFSTTGML 332

Possible role in transport between endoplasmic reticulum and Golgi.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
224086657	351	predicted protein [Populus trichocarpa]	0.994	0.507	0.904	4e-92
356547537	351	PREDICTED: probable endoplasmic reticulu	0.972	0.495	0.890	8e-90
118482697	366	unknown [Populus trichocarpa]	0.977	0.478	0.897	1e-89
224137484	351	predicted protein [Populus trichocarpa]	0.977	0.498	0.897	2e-89
225446891	351	PREDICTED: endoplasmic reticulum-Golgi i	0.994	0.507	0.876	4e-89
356575088	347	PREDICTED: endoplasmic reticulum-Golgi i	0.972	0.501	0.885	4e-89
255637400	347	unknown [Glycine max]	0.972	0.501	0.879	1e-88
255563175	191	Endoplasmic reticulum-Golgi intermediate	0.972	0.910	0.885	2e-88
30686584	354	Endoplasmic reticulum vesicle transporte	0.977	0.494	0.875	7e-88
297830940	354	hypothetical protein ARALYDRAFT_479742 [	0.966	0.488	0.878	7e-88

>gi|224086657|ref|XP_002307923.1| predicted protein [Populus trichocarpa] gi|222853899|gb|EEE91446.1| predicted protein [Populus trichocarpa]

 Score =  342 bits (877), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 161/178 (90%), Positives = 171/178 (96%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
           +VYGVLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHDLSFGPKYPGIHNPLD
Sbjct: 174 RVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLD 233

Query: 62  GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
           GT R+LH+TSGTFKYYIKIVPTEYRYISK+VLPTNQFSVTEYFS + +FDRTWPAVYFLY
Sbjct: 234 GTTRILHETSGTFKYYIKIVPTEYRYISKEVLPTNQFSVTEYFSPMTDFDRTWPAVYFLY 293

Query: 122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR 179
           DLSPITVTIKEERRSFLH ITRLCAVLGGTFALTGMLDRWM RLLEALTKP+ RSVLR
Sbjct: 294 DLSPITVTIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMCRLLEALTKPNPRSVLR 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547537|ref|XP_003542168.1| PREDICTED: probable endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Glycine max]

 Score =  334 bits (857), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 155/174 (89%), Positives = 166/174 (95%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
           +VYGVLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHDLSFGPKYPG+HNPLD
Sbjct: 177 RVYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLD 236

Query: 62  GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
            T R+LHDTSGTFKYYIK+VPTEYRYISK+VLPTNQFSV+EY+S IN+FDRTWPAVYFLY
Sbjct: 237 DTTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLY 296

Query: 122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSAR 175
           DLSPITVTIKEERRSFLH ITRLCAVLGGTFA+TGMLDRWMYRLLEALTK  ++
Sbjct: 297 DLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLLEALTKSKSK 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482697|gb|ABK93267.1| unknown [Populus trichocarpa]

 Score =  333 bits (854), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 157/175 (89%), Positives = 166/175 (94%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
           +VYGVLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHDLSFGPKYPGIHNPLD
Sbjct: 189 RVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLD 248

Query: 62  GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
           GT R+L +TSG FKYYIKIVPTEYRYISKDVLPTNQFSVTEYFS I +FDRTWPAVYFLY
Sbjct: 249 GTARILRETSGIFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSPITDFDRTWPAVYFLY 308

Query: 122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARS 176
           DLSPITVTIKEERRSFLH ITRLCA+LGGTFALTGMLDRWMYRLLEALTKP+  S
Sbjct: 309 DLSPITVTIKEERRSFLHFITRLCAILGGTFALTGMLDRWMYRLLEALTKPNRGS 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137484|ref|XP_002322569.1| predicted protein [Populus trichocarpa] gi|222867199|gb|EEF04330.1| predicted protein [Populus trichocarpa]

 Score =  333 bits (853), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 157/175 (89%), Positives = 166/175 (94%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
           +VYGVLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHDLSFGPKYPGIHNPLD
Sbjct: 174 RVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLD 233

Query: 62  GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
           GT R+L +TSG FKYYIKIVPTEYRYISKDVLPTNQFSVTEYFS I +FDRTWPAVYFLY
Sbjct: 234 GTARILRETSGIFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSPITDFDRTWPAVYFLY 293

Query: 122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARS 176
           DLSPITVTIKEERRSFLH ITRLCA+LGGTFALTGMLDRWMYRLLEALTKP+  S
Sbjct: 294 DLSPITVTIKEERRSFLHFITRLCAILGGTFALTGMLDRWMYRLLEALTKPNRGS 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446891|ref|XP_002284045.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Vitis vinifera] gi|296086333|emb|CBI31774.3| unnamed protein product [Vitis vinifera]

 Score =  332 bits (851), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 156/178 (87%), Positives = 167/178 (93%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
           +VYGVLDVQRVAGNFHISVHGLNI+VAQMIF GA +VNVSH+IHDLSFGPKYPG+HNPLD
Sbjct: 174 RVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAIHVNVSHIIHDLSFGPKYPGLHNPLD 233

Query: 62  GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
           GTVR+L   SGTFKYYIKIVPTEYRYISK+VLPTNQFSV EYFS +NEFDRTWPAVYFLY
Sbjct: 234 GTVRILRGASGTFKYYIKIVPTEYRYISKEVLPTNQFSVMEYFSPMNEFDRTWPAVYFLY 293

Query: 122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR 179
           DLSP+TVTIKEERRSFLH ITRLCAVLGGTFALTGMLDRWMYR LE LTKP+A+SV R
Sbjct: 294 DLSPVTVTIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMYRFLEMLTKPNAKSVYR 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575088|ref|XP_003555674.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Glycine max]

 Score =  332 bits (851), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 154/174 (88%), Positives = 165/174 (94%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
           +VYGVLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHDLSFGPKYPG+HNPLD
Sbjct: 173 RVYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLD 232

Query: 62  GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
            T R+LHDTSGTFKYYIK+VPTEYRYISK+VLPTNQFSV+EY+S IN+FDRTWPAVYFLY
Sbjct: 233 DTTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLY 292

Query: 122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSAR 175
           DLSPITVTIKEERRSFLH ITRLCAVLGGTFA+TGMLDRWMYRLLE LTK  ++
Sbjct: 293 DLSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLLETLTKSKSK 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637400|gb|ACU19028.1| unknown [Glycine max]

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 153/174 (87%), Positives = 164/174 (94%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
           +VYGVLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHDLSFGPKYPG+HNPLD
Sbjct: 173 RVYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLD 232

Query: 62  GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
            T R+LHDTSGTFKYYIK+VPTEYRYISK+VLPTNQFSV+EY+S IN+FDRTWPAVYFLY
Sbjct: 233 DTTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLY 292

Query: 122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSAR 175
           DLSPITVTIKEERRSF H ITRLCAVLGGTFA+TGMLDRWMYRLLE LTK  ++
Sbjct: 293 DLSPITVTIKEERRSFFHFITRLCAVLGGTFAVTGMLDRWMYRLLETLTKSKSK 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563175|ref|XP_002522591.1| Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus communis] gi|223538182|gb|EEF39792.1| Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus communis]

 Score =  330 bits (845), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 154/174 (88%), Positives = 167/174 (95%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
           +VYGVLDVQRVAGNFHISVHGLNI+VAQMIF GA +VNVSH+IHDLSFGPK+PG+HNPLD
Sbjct: 16  RVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAIHVNVSHIIHDLSFGPKFPGLHNPLD 75

Query: 62  GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
           GT R+LHD SGTFKYYIKIVPTEYRYISK+VLPTNQFSVTEYFS ++E+DRTWPAVYFLY
Sbjct: 76  GTARILHDASGTFKYYIKIVPTEYRYISKEVLPTNQFSVTEYFSPMSEYDRTWPAVYFLY 135

Query: 122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSAR 175
           DLSPITVTIKEERRSFLH ITRLCAVLGGTFALTGMLDRWMYRLLEA+TKP+ R
Sbjct: 136 DLSPITVTIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMYRLLEAVTKPNTR 189

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686584|ref|NP_188868.2| Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana] gi|13877821|gb|AAK43988.1|AF370173_1 unknown protein [Arabidopsis thaliana] gi|51969000|dbj|BAD43192.1| unknown protein [Arabidopsis thaliana] gi|51970108|dbj|BAD43746.1| unknown protein [Arabidopsis thaliana] gi|51970556|dbj|BAD43970.1| unknown protein [Arabidopsis thaliana] gi|51970734|dbj|BAD44059.1| unknown protein [Arabidopsis thaliana] gi|62319967|dbj|BAD94071.1| hypothetical protein [Arabidopsis thaliana] gi|332643097|gb|AEE76618.1| Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana]

 Score =  328 bits (840), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 154/176 (87%), Positives = 166/176 (94%), Gaps = 1/176 (0%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
           +VYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHDLSFGPKYPGIHNPLD
Sbjct: 179 RVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPLD 238

Query: 62  GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
            T R+LHDTSGTFKYYIKIVPTEYRY+SKDVL TNQ+SVTEYF+ + EFDRTWPAVYFLY
Sbjct: 239 DTNRILHDTSGTFKYYIKIVPTEYRYLSKDVLSTNQYSVTEYFTPMTEFDRTWPAVYFLY 298

Query: 122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALT-KPSARS 176
           DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM+R +E+   KPS R+
Sbjct: 299 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMFRFIESFNKKPSTRA 354

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830940|ref|XP_002883352.1| hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata] gi|297329192|gb|EFH59611.1| hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata]

 Score =  328 bits (840), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 152/173 (87%), Positives = 165/173 (95%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
           +VYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHDLSFGPKYPGIHNPLD
Sbjct: 179 RVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPLD 238

Query: 62  GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
            T R+LHDTSGTFKYYIKIVPTEYRY+SKDVL TNQ+SVTEY++ + EFDRTWPAVYFLY
Sbjct: 239 DTNRILHDTSGTFKYYIKIVPTEYRYLSKDVLSTNQYSVTEYYTPMTEFDRTWPAVYFLY 298

Query: 122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSA 174
           DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM+RL+E+  K S+
Sbjct: 299 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMFRLIESFNKKSS 351

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
TAIR|locus:2087817	354	AT3G22290 "AT3G22290" [Arabido	0.977	0.494	0.875	2.2e-82
UNIPROTKB|Q5EAE0	383	ERGIC3 "Endoplasmic reticulum-	0.949	0.443	0.426	1.2e-33
UNIPROTKB|Q9Y282	383	ERGIC3 "Endoplasmic reticulum-	0.949	0.443	0.426	1.2e-33
MGI|MGI:1913616	383	Ergic3 "ERGIC and golgi 3" [Mu	0.949	0.443	0.426	1.5e-33
ZFIN|ZDB-GENE-040426-795	383	ergic3 "ERGIC and golgi 3" [Da	0.949	0.443	0.420	4.7e-32
TAIR|locus:2034330	489	AT1G36050 "AT1G36050" [Arabido	0.938	0.343	0.405	9.8e-32
TAIR|locus:2015056	386	AT1G22200 "AT1G22200" [Arabido	0.938	0.435	0.4	3.3e-31
DICTYBASE|DDB_G0292002	383	ergic3 "endoplasmic reticulum-	0.938	0.438	0.379	5.6e-29
FB|FBgn0036489	373	CG7011 [Drosophila melanogaste	0.938	0.450	0.378	4.2e-24
MGI|MGI:1914706	377	Ergic2 "ERGIC and golgi 2" [Mu	0.849	0.403	0.413	1.8e-23

TAIR|locus:2087817 AT3G22290 "AT3G22290" [Arabidopsis thaliana (taxid:3702)]

 Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
 Identities = 154/176 (87%), Positives = 166/176 (94%)

Query:     2 QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLD 61
             +VYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHDLSFGPKYPGIHNPLD
Sbjct:   179 RVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPLD 238

Query:    62 GTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLY 121
              T R+LHDTSGTFKYYIKIVPTEYRY+SKDVL TNQ+SVTEYF+ + EFDRTWPAVYFLY
Sbjct:   239 DTNRILHDTSGTFKYYIKIVPTEYRYLSKDVLSTNQYSVTEYFTPMTEFDRTWPAVYFLY 298

Query:   122 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK-PSARS 176
             DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM+R +E+  K PS R+
Sbjct:   299 DLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMFRFIESFNKKPSTRA 354

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|Q5EAE0 ERGIC3 "Endoplasmic reticulum-Golgi intermediate compartment protein 3" [Bos taurus (taxid:9913)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 75/176 (42%), Positives = 106/176 (60%)

Query:     2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
             QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPGI 
Sbjct:   200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIRHLSFGEDYPGIV 259

Query:    58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
             NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N    D+  P
Sbjct:   260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLMGDQGLP 319

Query:   116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
              V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct:   320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9Y282 ERGIC3 "Endoplasmic reticulum-Golgi intermediate compartment protein 3" [Homo sapiens (taxid:9606)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 75/176 (42%), Positives = 106/176 (60%)

Query:     2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
             QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPGI 
Sbjct:   200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGEDYPGIV 259

Query:    58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
             NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N    D+  P
Sbjct:   260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLP 319

Query:   116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
              V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct:   320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

MGI|MGI:1913616 Ergic3 "ERGIC and golgi 3" [Mus musculus (taxid:10090)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 75/176 (42%), Positives = 106/176 (60%)

Query:     2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
             QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPGI 
Sbjct:   200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGEDYPGIV 259

Query:    58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
             NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N    D+  P
Sbjct:   260 NPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLLGDQGLP 319

Query:   116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
              V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct:   320 GVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAIQK 375

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

ZFIN|ZDB-GENE-040426-795 ergic3 "ERGIC and golgi 3" [Danio rerio (taxid:7955)]

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 74/176 (42%), Positives = 105/176 (59%)

Query:     2 QVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIH 57
             QVYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG  YPGI 
Sbjct:   200 QVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHFIKHLSFGKDYPGIV 259

Query:    58 NPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF--DRTWP 115
             NPLD T       S  ++Y++KIVPT Y     +V+ TNQFSVT +    N    D+  P
Sbjct:   260 NPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKTNQFSVTRHEKIANGLIGDQGLP 319

Query:   116 AVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
              V+ LY+LSP+ V   E++RSF H +T +CA++GG F + G++D  +Y    A+ K
Sbjct:   320 GVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFTVAGLIDSLIYHSARAIQK 375

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

TAIR|locus:2034330 AT1G36050 "AT1G36050" [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 71/175 (40%), Positives = 109/175 (62%)

Query:     3 VYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHN 58
             +YG L+V +VAGNFH     S H   ++V  ++     + N+SH I+ L++G  +PG+ N
Sbjct:   205 IYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDLLAFQKDSFNISHKINRLTYGDYFPGVVN 264

Query:    59 PLDGTVRMLHDT-SGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFD-RTWPA 116
             PLD  V    DT +  ++Y+IK+VPT Y  I    + +NQFSVTE+  +      ++ P 
Sbjct:   265 PLD-KVEWSQDTPNAMYQYFIKVVPTVYTDIRGHTIQSNQFSVTEHVKSSEAGQLQSLPG 323

Query:   117 VYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
             V+F YDLSPI VT  EE  SFLH +T +CA++GG F ++G++D ++Y   +A+ K
Sbjct:   324 VFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGGVFTVSGIIDAFIYHGQKAIKK 378

GO:0003674 "molecular_function" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2015056 AT1G22200 "AT1G22200" [Arabidopsis thaliana (taxid:3702)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 70/175 (40%), Positives = 106/175 (60%)

Query:     3 VYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHN 58
             V+G L+V +VAGNFH     S H        M+     N N+SH ++ L+FG  +PG+ N
Sbjct:   205 VHGFLEVNKVAGNFHFIPGQSFHQSGFQFHDMLLFQQGNYNISHKVNRLAFGDFFPGVVN 264

Query:    59 PLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTW--PA 116
             PLDG        SG ++Y+IK+VP+ Y  + ++ + +NQFSVTE+F  + E  R    P 
Sbjct:   265 PLDGVQWNQGKQSGVYQYFIKVVPSIYTDVHQNTIQSNQFSVTEHFQNM-EAGRMQSPPG 323

Query:   117 VYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
             V+F YDLSPI V  +E+   FLH +T +CA++GG F ++G++D ++Y    A+ K
Sbjct:   324 VFFYYDLSPIKVIFEEQHVEFLHFLTNVCAIVGGIFTVSGIVDSFIYHGQRAIKK 378

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

DICTYBASE|DDB_G0292002 ergic3 "endoplasmic reticulum-golgi intermediate compartment protein 3" [Dictyostelium discoideum (taxid:44689)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 68/179 (37%), Positives = 106/179 (59%)

Query:     2 QVYGVLDVQRVAGNFHISV------HGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPG 55
             QVYG + V +VAGNFH +       H ++++  Q    G+   NVSH I+ LSFG  +PG
Sbjct:   199 QVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGS--FNVSHTINRLSFGNDFPG 256

Query:    56 IHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI---NEFDR 112
             I NPLD   +      G F+Y++K+VPT Y  ++ + + TNQ+SVTE++  +    E   
Sbjct:   257 IKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQYSVTEHYRLLAKKGEEPS 316

Query:   113 TWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
               P ++F+YDLSPI + + E  +SF   +T +CA++GG F + G+ D ++Y   + L K
Sbjct:   317 GLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVFGIFDSFIYYSTKNLQK 375

GO:0003674 "molecular_function" evidence=ND

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0036489 CG7011 [Drosophila melanogaster (taxid:7227)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 67/177 (37%), Positives = 98/177 (55%)

Query:     2 QVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAK--NVNVSHVIHDLSFGPK--YPGIH 57
             ++ G L+V R+AG+FH +  G +  + Q      +  NV +SH I+ LSFG K  +   H
Sbjct:   191 RIQGHLEVNRMAGSFHFAP-GKSFSIRQFHIHDFQFSNVKLSHTINHLSFGEKIEFAKTH 249

Query:    58 NPLDGT-VRMLHDTSGTFKYYIKIVPTEYRYISKDVLP--TNQFSVTEYFSTINEFDRTW 114
              PLDG  V +    S  F YY+KIVPT Y   + D  P  TNQFSVT Y   +++ +R  
Sbjct:   250 -PLDGLRVDVAETKSEMFNYYLKIVPTLYMRGNSDGEPIYTNQFSVTRYRKDLSDRERGM 308

Query:   115 PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 171
             P ++F Y+LSP+ V   E   SF H  T  C+++GG F + G+L   +    EA+ +
Sbjct:   309 PGIFFSYELSPLMVKYAERHSSFGHFATNCCSIIGGVFTVAGILAVLLNNSWEAIQR 365

GO:0030134 "ER to Golgi transport vesicle" evidence=ISS

MGI|MGI:1914706 Ergic2 "ERGIC and golgi 2" [Mus musculus (taxid:10090)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 69/167 (41%), Positives = 97/167 (58%)

Query:     2 QVYGVLDVQRVAGNFHISV-----HGL-NIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPG 55
             +++G L V +VAGNFHI+V     H   + ++A ++     + N SH I  LSFG   PG
Sbjct:   171 RIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALV--NHDSYNFSHRIDHLSFGELVPG 228

Query:    56 IHNPLDGTVRMLHDTSGTFKYYIKIVPTE-YRY-ISKDVLPTNQFSVTEYFSTINEFDRT 113
             I NPLDGT ++  D +  F+Y+I +VPT+ + Y IS D   T+QFSVTE    IN    +
Sbjct:   229 IINPLDGTEKIAVDHNQMFQYFITVVPTKLHTYKISAD---THQFSVTERERIINHAAGS 285

Query:   114 W--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 158
                  ++  YDLS + VT+ EE   F     RLC ++GG F+ TGML
Sbjct:   286 HGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIIGGIFSTTGML 332

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	179
pfam07970	222	pfam07970, COPIIcoated_ERV, Endoplasmic reticulum	1e-52

>gnl|CDD|219673 pfam07970, COPIIcoated_ERV, Endoplasmic reticulum vesicle transporter

 Score =  167 bits (424), Expect = 1e-52
 Identities = 65/167 (38%), Positives = 95/167 (56%), Gaps = 10/167 (5%)

Query: 2   QVYGVLDVQRVAGNFHISVHGLNIYVAQMIF-----GGAKNVNVSHVIHDLSFGPKYP-G 55
           +V G L+V RVAGNFHI+  G +                + +N SH I+ LSFG ++P G
Sbjct: 57  RVKGTLEVNRVAGNFHIA-PGRSFQEKGGHVHDLSLFTDEKLNFSHTINHLSFGEEFPGG 115

Query: 56  IHNPLDGT--VRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINE-FDR 112
           + NPLDGT            + Y++K+VPT Y  ++  ++ TNQ+SVT +   +      
Sbjct: 116 VTNPLDGTTKFVQTDKGYHMYSYFLKVVPTRYESLNGLIVETNQYSVTSHDRPVTGGSRG 175

Query: 113 TWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLD 159
             P V+F YD SPI V   E+R+SF H +T LCA++GG FA+ G++D
Sbjct: 176 GVPGVFFNYDFSPIKVINTEDRQSFSHFLTNLCAIIGGVFAVAGLID 222

This family is conserved from plants and fungi to humans. Erv46 works in close conjunction with Erv41 and together they form a complex which cycles between the endoplasmic reticulum and Golgi complex. Erv46-41 interacts strongly with the endoplasmic reticulum glucosidase II. Mammalian glucosidase II comprises a catalytic alpha-subunit and a 58 kDa beta subunit, which is required for ER localisation. All proteins identified biochemically as Erv41p-Erv46p interactors are localised to the early secretory pathway and are involved in protein maturation and processing in the ER and/or sorting into COPII vesicles for transport to the Golgi. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	179
KOG2667	379	consensus COPII vesicle protein [Intracellular tra	100.0
PF07970	222	COPIIcoated_ERV: Endoplasmic reticulum vesicle tra	100.0

>KOG2667 consensus COPII vesicle protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4.9e-59  Score=404.81  Aligned_cols=176  Identities=44%  Similarity=0.769  Sum_probs=157.5

Q ss_pred             CEEEEEEEEeeeeeEEEEEEcCCc----eeeeeeeeCCCcccccceEEeEeeeCCCCCCCCCCCCCceeeecCCceeEEE
Q 030362            1 MQVYGVLDVQRVAGNFHISVHGLN----IYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKY   76 (179)
Q Consensus         1 cri~G~l~VnkV~GnfhI~~~~~~----~~~~~~~~~~~~~~N~sH~I~~lsFG~~~~~~~~PLdg~~~~~~~~~~~~~Y   76 (179)
                      |||+|++.||||||||||++.+..    .+.++..  ..+++||||+||||||||++|+..|||||+..++.+...+|+|
T Consensus       197 CRi~G~l~VNKVaGnfHia~g~~~~~~~~h~hd~~--~~~~~n~SH~InhLSFG~~~p~~~nPLdG~~~~~~~~~~~~~Y  274 (379)
T KOG2667|consen  197 CRIYGQLEVNKVAGNFHIAPGKSSQHSNAHVHDLS--LLDNLNFSHRINHLSFGEYIPGIVNPLDGTNFIANEHLTTFQY  274 (379)
T ss_pred             eEEEEEEEEeeecceEEEccCCCccccccccchhh--hcccCCceEEEeeeccCCCCcccccCCCCccccccCCccceee
Confidence            999999999999999999964211    1111111  1147999999999999999999999999998888888899999


Q ss_pred             EEEEEEEEEEeecCceeeeeeeEEEEEEEeec-CCCC-CcceEEEEEEccceEEEEEeeeccHHHHHHhHhhhccceeee
Q 030362           77 YIKIVPTEYRYISKDVLPTNQFSVTEYFSTIN-EFDR-TWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFAL  154 (179)
Q Consensus        77 flkvVPT~y~~~~~~~~~t~QYsvt~~~~~~~-~~~~-~~PgI~F~Yd~sPi~v~~~~~r~s~~~flt~lcaIiGGvftv  154 (179)
                      |+|||||.|.+.++.++.|||||||++.+... +.+. ++|||||+||+|||+|+++|+|.||++|||+|||||||+|||
T Consensus       275 f~KvVPT~y~~~~~~~~~T~QysVt~~~~~~~~~~~~~~~PGifF~YelSPl~V~v~E~r~sf~~Flt~lCAIiGGvftv  354 (379)
T KOG2667|consen  275 FLKVVPTVYKYKSGRVIDTNQYSVTEYEYVLHSHRAKSGIPGIFFKYELSPLMVKVTEERQSFSHFLTRLCAIIGGVFTV  354 (379)
T ss_pred             EEEEcceEEEeecCceecceeeeeeeeEEeccccccccCCCeEEEEEecCceEEEEEeccccHHHHHHHHHHHhcceeeh
Confidence            99999999999999999999999999998876 3333 899999999999999999999999999999999999999999


Q ss_pred             hhhhHHHHHHHHHHHcCCcccCcC
Q 030362          155 TGMLDRWMYRLLEALTKPSARSVL  178 (179)
Q Consensus       155 ~gliD~~~~~~~~~~~k~~~~~~~  178 (179)
                      ||+||++++++.++++++.+.+|+
T Consensus       355 agiid~~~~~~~~~i~~k~~~gk~  378 (379)
T KOG2667|consen  355 AGILDSLLYHILELIKGKIALGKY  378 (379)
T ss_pred             HHHHHHHHHHHHHHHhcchhhhcc
Confidence            999999999999999999998886

>PF07970 COPIIcoated_ERV: Endoplasmic reticulum vesicle transporter ; InterPro: IPR012936 This domain occurs in many hypothetical proteins, and also two partially characterised proteins

Probab=100.00  E-value=3.6e-56  Score=366.18  Aligned_cols=159  Identities=41%  Similarity=0.739  Sum_probs=139.3

Q ss_pred             CEEEEEEEEeeeeeEEEEEEcCCc----eeeeeeeeCCCc-ccccceEEeEeeeCCCCCCCCCCCCCceee--ecCCcee
Q 030362            1 MQVYGVLDVQRVAGNFHISVHGLN----IYVAQMIFGGAK-NVNVSHVIHDLSFGPKYPGIHNPLDGTVRM--LHDTSGT   73 (179)
Q Consensus         1 cri~G~l~VnkV~GnfhI~~~~~~----~~~~~~~~~~~~-~~N~sH~I~~lsFG~~~~~~~~PLdg~~~~--~~~~~~~   73 (179)
                      |||+|++.||||+|||||+++...    .+.++....... .+|+||+|||||||+++|+..|||||+.++  .+....+
T Consensus        56 Cri~G~l~VnkV~Gnfhi~~g~~~~~~~~h~hd~~~~~~~~~~N~SH~I~~lsFG~~~~~~~~PLdg~~~~~~~~~~~~~  135 (222)
T PF07970_consen   56 CRIYGSLEVNKVPGNFHIAPGRSFQQDGGHIHDLSPFDDEPKFNFSHTINHLSFGEEIPGIVNPLDGTQKIVQTDNGNYM  135 (222)
T ss_pred             CEEEEEEEEEEEEEEEEEEecchhccCCcceeehhhhccccCCCCCeEEEEEEeccccccccccccCccccccCCCCcee
Confidence            999999999999999999986532    111111111122 799999999999999999999999999883  4667889


Q ss_pred             EEEEEEEEEEEEEeecCceeeeeeeEEEEEEEeecCCC-CCcceEEEEEEccceEEEEEeeeccHHHHHHhHhhhcccee
Q 030362           74 FKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFD-RTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTF  152 (179)
Q Consensus        74 ~~YflkvVPT~y~~~~~~~~~t~QYsvt~~~~~~~~~~-~~~PgI~F~Yd~sPi~v~~~~~r~s~~~flt~lcaIiGGvf  152 (179)
                      |+||||||||+|...++..++|||||+|++.+.+.... .++|||||+||||||+|+++++|+||+||||+|||||||+|
T Consensus       136 ~~YflkvVPT~y~~~~~~~~~t~qYsvt~~~~~~~~~~~~~~PGI~F~Yd~SPi~v~~~~~r~s~~~flt~lcaIiGGvf  215 (222)
T PF07970_consen  136 YQYFLKVVPTTYEDLDGFSIETYQYSVTEHSRPLNGGSSGGLPGIFFKYDFSPIMVVITEDRKSFLHFLTRLCAIIGGVF  215 (222)
T ss_pred             EEEEEEEeeeeeEeccccccccccccceeeeeeccCCCCCCCceEEEEEeceeEEEEEEEecCCHHHHHHHHHHHhchHh
Confidence            99999999999999988767999999999999987654 78999999999999999999999999999999999999999


Q ss_pred             eehhhhH
Q 030362          153 ALTGMLD  159 (179)
Q Consensus       153 tv~gliD  159 (179)
                      |++||||
T Consensus       216 tv~gliD  222 (222)
T PF07970_consen  216 TVAGLID  222 (222)
T ss_pred             eEEEecC
Confidence            9999998

One of these proteins, PTX1 Q96RQ1 from SWISSPROT, is a homeodomain-containing transcription factor involved in regulating all pituitary hormone genes []. This protein is down regulated in prostate carcinoma []. The other protein, ERGIC-32 Q969X5 from SWISSPROT, is involved in protein transport from the ER to the Golgi [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00