Citrus Sinensis ID: 030371

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRRPVKK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccEEEEEEccEEEccccEEcccccccccEEEEcccccccEEEEEEEcccccccccccccEEEEEEEEccccccccccccEEEEEcccccccccccEEEEEEEcccccccccccccccccHHHHHHHHcccccEEEEEEEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEEccccccccccEEEEEEEccEEEEcccEcccccEccccEEEEcccccccEEEEEEEEcccccccccccccEEEEEEEEEccccccccccEEEEccccccccccEEEEEEEEEcccccEEccccccccccHHHHHHHHcccccEEEEEEEcccccccccccccccc
Coil and Loop (DISEMBL)
msgdrdplvIGRVVGDVLDNFTRTIPlmvtysgkdvkngcelkpsavinqprveiggddlRTFYTLVmvdpdapspsdpglrEYLHWLVTdipetteasfgkeivsyesprptvgiHRFVFVLFRQHVKqnvcapgwrqnfsckdfAELYNLGSPVAAVYFNCqretgssasrrpvkk
Flexible Loop (DISEMBL)
msgdrdplviGRVVGDVLDNFTRTIPLMVtysgkdvkngcelkpsavinqprveiGGDDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQretgssasrrpvkk
Low Complexity Region (SEG)
MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRRPVKK
Disordered region (IsUnstruct)
*******LVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVD**********LREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQ**************
Disordered Region (DISOPRED)
*****DPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQH************NFSCKDFAELYNLGSPVAAVYFNCQRETG**********
Disordered Region (DISEMBL)
MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQR*************
Disordered Region (DISPRO)
****RDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQR*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRRPVKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	178	2.2.26 [Sep-21-2011]
Q93WI9	179	Protein HEADING DATE 3A O	yes	no	0.955	0.949	0.776	2e-75
Q8VWH2	178	Protein HEADING DATE 3B O	no	no	0.966	0.966	0.720	1e-70
Q9SXZ2	175	Protein FLOWERING LOCUS T	yes	no	0.949	0.965	0.686	3e-66
Q9S7R5	175	Protein TWIN SISTER of FT	no	no	0.949	0.965	0.680	7e-64
Q9XH43	175	CEN-like protein 2 OS=Nic	N/A	no	0.938	0.954	0.625	9e-56
Q9XH42	175	CEN-like protein 4 OS=Nic	N/A	no	0.932	0.948	0.608	2e-54
Q9FIT4	177	Protein BROTHER of FT and	no	no	0.971	0.977	0.570	4e-54
P93003	177	Protein TERMINAL FLOWER 1	no	no	0.915	0.920	0.614	5e-54
O82088	175	Protein SELF-PRUNING OS=S	N/A	no	0.932	0.948	0.584	9e-53
Q9ZNV5	175	Protein CENTRORADIALIS-li	no	no	0.938	0.954	0.578	1e-52

>sp|Q93WI9|HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A PE=1 SV=1

 Score =  281 bits (718), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 132/170 (77%), Positives = 145/170 (85%)

Query: 4   DRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTF 63
           DRDPLV+GRVVGDVLD F R+  L VTY  K V NGCELKPS V +QPRVE+GG+D+RTF
Sbjct: 7   DRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRTF 66

Query: 64  YTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVL 123
           YTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+E++ YESPRPT+GIHR VFVL
Sbjct: 67  YTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFVL 126

Query: 124 FRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASR 173
           F+Q  +Q V APGWRQNF+ KDFAELYNLGSPVAAVYFNCQRE GS   R
Sbjct: 127 FQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRR 176

Probable mobile flower-promoting signal (florigen) that moves from the leaf to the shoot apical meristem (SAM) and induces flowering. Promotes the transition from vegetative growth to flowering downstream of HD1 and EHD1 under short day (SD) conditions. Acts upstream of MADS14 and MADS15.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8VWH2|HD3B_ORYSJ Protein HEADING DATE 3B OS=Oryza sativa subsp. japonica GN=HD3B PE=2 SV=1

 Score =  265 bits (677), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 124/172 (72%), Positives = 141/172 (81%)

Query: 2   SGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLR 61
           SG  DPLV+GR+VGDVLD F R   L V+Y  + V NGCELKPS V  QPRV +GG+D+R
Sbjct: 4   SGRDDPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDMR 63

Query: 62  TFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVF 121
           TFYTLVMVDPDAPSPS+P LREYLHWLVTDIP TT A+FG+E++ YESPRPT+GIHR VF
Sbjct: 64  TFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVF 123

Query: 122 VLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASR 173
           VLF+Q  +Q V APGWRQNFS ++FAELYNLGSPVA VYFNCQRE GS   R
Sbjct: 124 VLFQQLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRR 175

Probable mobile flower-promoting signal (florigen) that moves from the leaf to the shoot apical meristem (SAM) and induces flowering. Promotes the transition from vegetative growth to flowering under long day (LD) conditions. Acts upstream of MADS14 and MADS15. May also participate in the promotion of flowering under short day (SD) conditions.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SXZ2|FT_ARATH Protein FLOWERING LOCUS T OS=Arabidopsis thaliana GN=FT PE=1 SV=2

 Score =  250 bits (639), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 116/169 (68%), Positives = 137/169 (81%)

Query: 5   RDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFY 64
           RDPL++ RVVGDVLD F R+I L VTY  ++V NG +L+PS V N+PRVEIGG+DLR FY
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLF 124
           TLVMVDPD PSPS+P LREYLHWLVTDIP TT  +FG EIV YE+P PT GIHR VF+LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASR 173
           RQ  +Q V APGWRQNF+ ++FAE+YNLG PVAAV++NCQRE+G    R
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

Probable component of the mobile flower-promoting signal (floral stimulus or florigen). Promotes the transition from vegetative growth to flowering. Required for 'SEPALLATA3' (SEP3) and 'FRUITFULL' (FUL) accumulation in mature rosette leaves. Seems to acts in parallel with 'LEAFY' to induce flowering by regulating 'APETALA1'. May play a role in both the autonomous and the long-day flowering pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S7R5|TSF_ARATH Protein TWIN SISTER of FT OS=Arabidopsis thaliana GN=TSF PE=2 SV=1

 Score =  243 bits (619), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 115/169 (68%), Positives = 131/169 (77%)

Query: 5   RDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFY 64
           RDPLV+G VVGDVLD FTR + L VTY  ++V NG +L+PS V+N+P VEIGGDD R FY
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLF 124
           TLVMVDPD PSPS+P  REYLHWLVTDIP TT  +FG E+V YESPRP  GIHR V VLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASR 173
           RQ  +Q V APGWRQ F+ ++FAE+YNLG PVAA YFNCQRE G    R
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XH43|CET2_TOBAC CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1

 Score =  216 bits (549), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 107/171 (62%), Positives = 133/171 (77%), Gaps = 4/171 (2%)

Query: 6   DPLVIGRVVGDVLDNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEIGGDDLRTFY 64
           DPLVIGRV+G+V+D FT ++ + VTY S K V NG EL PS+V ++PRVE+ G DLR+F+
Sbjct: 7   DPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSFF 66

Query: 65  TLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLF 124
           T++M+DPD P PSDP LRE+LHW+VTDIP TT+ SFGKEIV YE PRP +GIHRFVF+LF
Sbjct: 67  TMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFVFLLF 126

Query: 125 RQHVKQNV-CAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           +Q  +Q V  AP  R  F+ + FAE   LGSPVAAV+FNCQRET  +A RR
Sbjct: 127 KQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRET--AARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Nicotiana tabacum (taxid: 4097)

>sp|Q9XH42|CET4_TOBAC CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1

 Score =  211 bits (538), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 104/171 (60%), Positives = 132/171 (77%), Gaps = 5/171 (2%)

Query: 6   DPLVIGRVVGDVLDNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEIGGDDLRTFY 64
           DPLVIGRV+G+V+D FT ++ + VTY S K V NG EL PS+V ++PRVE+ G DLR+F+
Sbjct: 7   DPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSFF 66

Query: 65  TLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLF 124
           TL+M+DPD P PSDP LRE+LHW+VTDIP TT+ SFG+EIV YE PRP +GIHRFVF+LF
Sbjct: 67  TLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRFVFLLF 126

Query: 125 RQHVKQN-VCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           +Q  +Q  + AP  R  F+ + F+E   LGSPVAA +FNCQRET   A+RR
Sbjct: 127 KQKKRQTLLSAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRET---AARR 174

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Nicotiana tabacum (taxid: 4097)

>sp|Q9FIT4|BFT_ARATH Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT PE=3 SV=1

 Score =  210 bits (534), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 101/177 (57%), Positives = 134/177 (75%), Gaps = 4/177 (2%)

Query: 1   MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEIGGDD 59
           MS + +PL++GRV+GDVL+ F  ++ + VT+ S   V NG EL PS ++++PRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 60  LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRF 119
           LR+F+TL+M+DPDAPSPS+P +REYLHW+VTDIP TT+ASFG+EIV YE+P+P  GIHR+
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 120 VFVLFRQHVKQNV-CAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRRP 175
           VF LF+Q  +Q V  AP  R+ F+   F+  + L  PVAAVYFN QRET  +  RRP
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRET--APRRRP 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Arabidopsis thaliana (taxid: 3702)

>sp|P93003|TFL1_ARATH Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1 SV=1

 Score =  210 bits (534), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 102/166 (61%), Positives = 131/166 (78%), Gaps = 3/166 (1%)

Query: 6   DPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYT 65
           +PL++GRVVGDVLD FT T  + V+Y+ K V NG EL PS+V ++PRVEI G DLR+F+T
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 66  LVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFR 125
           LVM+DPD P PSDP L+E+LHW+VT+IP TT+A+FGKE+VSYE PRP++GIHRFVFVLFR
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

Query: 126 QHVKQNVCAPGW--RQNFSCKDFAELYNLGSPVAAVYFNCQRETGS 169
           Q  ++ V  P    R +F+ + FA  Y+LG PVAAV+FN QRET +
Sbjct: 130 QK-QRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAA 174

Controls inflorescence meristem identity and is required for maintenance of a indeterminate inflorescence. Prevents the expression of 'APETALA1' and 'LEAFY'. Also plays a role in the regulation of the time of flowering in the long-day flowering pathway. May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Arabidopsis thaliana (taxid: 3702)

>sp|O82088|SELFP_SOLLC Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1

 Score =  206 bits (523), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 100/171 (58%), Positives = 130/171 (76%), Gaps = 5/171 (2%)

Query: 6   DPLVIGRVVGDVLDNFTRTIPLMVTYSG-KDVKNGCELKPSAVINQPRVEIGGDDLRTFY 64
           +PLVIGRV+G+V+D F  ++ + V Y+  K V NG E  PS+V ++PRVE+ G DLR+F+
Sbjct: 7   EPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGGDLRSFF 66

Query: 65  TLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLF 124
           TL+M+DPD P PSDP LRE+LHW+VTDIP TT+ SFG+E+V YE PRP +GIHRFVF+LF
Sbjct: 67  TLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHRFVFLLF 126

Query: 125 RQHVKQNV-CAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           +Q  +Q +  AP  R  FS + F+E   LGSPVAAV+FNCQRET   A+RR
Sbjct: 127 KQKKRQTISSAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRET---AARR 174

Not known. In plants homozygous for the recessive allele of the SP gene, sympodial segments develop progressively fewer nodes until the shoot is terminated by two consecutive. inflorescences.

Solanum lycopersicum (taxid: 4081)

>sp|Q9ZNV5|CEN_ARATH Protein CENTRORADIALIS-like OS=Arabidopsis thaliana GN=CEN PE=2 SV=1

 Score =  205 bits (521), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 99/171 (57%), Positives = 130/171 (76%), Gaps = 4/171 (2%)

Query: 6   DPLVIGRVVGDVLDNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEIGGDDLRTFY 64
           DPL++GRV+GDV+DN  + + + VTY S K V NG EL PS V  +P+VE+ G D+R+F+
Sbjct: 7   DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query: 65  TLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLF 124
           TLVM DPD P PSDP LRE+LHW+VTDIP TT+ SFGKEI+ YE PRP +GIHRFV++LF
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query: 125 RQHVKQNVCA-PGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           +Q  + +V + P +R  F+ ++FA   +LG PVAAV+FNCQRET  +A RR
Sbjct: 127 KQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRET--AARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors (By similarity). Can substitute for TERMINAL FLOWER 1 (in vitro).

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
166850556	177	CTRSFT1-like protein [Citrus trifoliata]	0.983	0.988	0.813	8e-80
4903139	177	CiFT [Citrus unshiu]	0.983	0.988	0.807	2e-79
164457875	177	flowering locus T [Citrus unshiu]	0.983	0.988	0.807	4e-79
164457877	177	flowering locus T [Citrus unshiu]	0.955	0.960	0.823	3e-78
282154868	174	flowering locus T-like protein [Ficus ca	0.977	1.0	0.793	5e-77
88770800	174	flowering locus T-like protein FT1 [Popu	0.977	1.0	0.787	1e-76
348499908	176	flowering locus T-like protein [Eucalypt	0.960	0.971	0.789	2e-76
221048110	174	flowering locus T [Malus x domestica] gi	0.977	1.0	0.793	2e-76
345500376	174	flowering locus T [Pyrus pyrifolia] gi|4	0.977	1.0	0.793	2e-76
444242624	174	flowering locus T [Camellia sinensis] gi	0.977	1.0	0.787	3e-76

>gi|166850556|gb|ABY91244.1| CTRSFT1-like protein [Citrus trifoliata]

 Score =  301 bits (770), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 144/177 (81%), Positives = 158/177 (89%), Gaps = 2/177 (1%)

Query: 2   SGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLR 61
           S +RDPL++GRVVGDVLDNFTRTIP+ +TYS KDV NG ELKPS V+NQPRVEIGGDDLR
Sbjct: 3   SRERDPLIVGRVVGDVLDNFTRTIPMSITYSNKDVNNGRELKPSEVLNQPRVEIGGDDLR 62

Query: 62  TFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVF 121
           TFYTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+EIV+YESPRPT+GIHRFVF
Sbjct: 63  TFYTLVMVDPDAPSPSDPSLREYLHWLVTDIPATTGASFGQEIVNYESPRPTMGIHRFVF 122

Query: 122 VLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRRPVKK 178
           VLFRQ  +Q V APGWRQNFS +DFAELYNLG PVAAVYFNCQRE+GS    RPV++
Sbjct: 123 VLFRQLGRQTVYAPGWRQNFSTRDFAELYNLGPPVAAVYFNCQRESGSGG--RPVRR 177

Source: Citrus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4903139|dbj|BAA77836.1| CiFT [Citrus unshiu]

 Score =  300 bits (767), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 143/177 (80%), Positives = 157/177 (88%), Gaps = 2/177 (1%)

Query: 2   SGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLR 61
           S +RDPL++GRVVGDVLDNFTRTIP+ +TYS KDV NG ELKPS V+NQPR EIGGDDLR
Sbjct: 3   SRERDPLIVGRVVGDVLDNFTRTIPMRITYSNKDVNNGRELKPSEVLNQPRAEIGGDDLR 62

Query: 62  TFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVF 121
           TFYTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+EIV+YESPRPT+GIHRFVF
Sbjct: 63  TFYTLVMVDPDAPSPSDPSLREYLHWLVTDIPATTGASFGQEIVNYESPRPTMGIHRFVF 122

Query: 122 VLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRRPVKK 178
           VLFRQ  +Q V APGWRQNFS +DFAELYNLG PVAAVYFNCQRE+GS    RPV++
Sbjct: 123 VLFRQLGRQTVYAPGWRQNFSTRDFAELYNLGPPVAAVYFNCQRESGSGG--RPVRR 177

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|164457875|dbj|BAF96644.1| flowering locus T [Citrus unshiu]

 Score =  298 bits (764), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 143/177 (80%), Positives = 157/177 (88%), Gaps = 2/177 (1%)

Query: 2   SGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLR 61
           S +RDPL++GRVVGDVLDNFTRTIP+ +TYS KDV NG ELKPS V+NQPRVEIGGDDLR
Sbjct: 3   SRERDPLIVGRVVGDVLDNFTRTIPMRITYSNKDVNNGRELKPSEVLNQPRVEIGGDDLR 62

Query: 62  TFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVF 121
           TFYTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+EIV+YESP PT+GIHRFVF
Sbjct: 63  TFYTLVMVDPDAPSPSDPSLREYLHWLVTDIPATTGASFGQEIVNYESPSPTMGIHRFVF 122

Query: 122 VLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRRPVKK 178
           VLFRQ  +Q V APGWRQNFS +DFAELYNLG PVAAVYFNCQRE+GS    RPV++
Sbjct: 123 VLFRQLGRQTVYAPGWRQNFSTRDFAELYNLGPPVAAVYFNCQRESGSGG--RPVRR 177

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|164457877|dbj|BAF96645.1| flowering locus T [Citrus unshiu]

 Score =  296 bits (757), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 140/170 (82%), Positives = 152/170 (89%)

Query: 2   SGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLR 61
           S DRDPL++GRVVGDVLDNFTRTIP+ +TY  KDV NG ELKPS V+NQPRVEIGGDDLR
Sbjct: 3   SRDRDPLILGRVVGDVLDNFTRTIPMRITYLNKDVNNGRELKPSEVLNQPRVEIGGDDLR 62

Query: 62  TFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVF 121
           TFYTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG++IV+YESPRPT+GIHRFVF
Sbjct: 63  TFYTLVMVDPDAPSPSDPSLREYLHWLVTDIPATTGASFGQDIVNYESPRPTMGIHRFVF 122

Query: 122 VLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSA 171
           VLFRQ  +Q V APGWRQNFS +DFAELYNLG PVAAVYFNCQRE+GS  
Sbjct: 123 VLFRQLGRQTVYAPGWRQNFSTRDFAELYNLGPPVAAVYFNCQRESGSGG 172

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|282154868|dbj|BAI60052.1| flowering locus T-like protein [Ficus carica]

 Score =  291 bits (746), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 138/174 (79%), Positives = 152/174 (87%)

Query: 1   MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDL 60
           M  +RDPLV+GRV+GDVLD FTR+I L VTY  K+V NGCELKPS V++QPRV+IGGDDL
Sbjct: 1   MPRERDPLVVGRVIGDVLDQFTRSISLRVTYGNKEVNNGCELKPSQVVSQPRVDIGGDDL 60

Query: 61  RTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFV 120
           RTFYTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+E+V YESPRPTVGIHRFV
Sbjct: 61  RTFYTLVMVDPDAPSPSDPSLREYLHWLVTDIPATTGASFGQEVVCYESPRPTVGIHRFV 120

Query: 121 FVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           FVLFRQ  +Q V APGWRQNF+ KDFAELYNLG PVAAVY+NCQRE+GS   RR
Sbjct: 121 FVLFRQLGRQTVYAPGWRQNFNTKDFAELYNLGLPVAAVYYNCQRESGSGGRRR 174

Source: Ficus carica

Species: Ficus carica

Genus: Ficus

Family: Moraceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|88770800|gb|ABD52003.1| flowering locus T-like protein FT1 [Populus tremula] gi|407355012|gb|AFU08239.1| flowering locus T [Populus tomentosa]

 Score =  290 bits (743), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 137/174 (78%), Positives = 152/174 (87%)

Query: 1   MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDL 60
           MS DRDPL +GRV+GDVLD FT++IPL VTY+ ++V NGCELKPS V NQPRV+IGG+DL
Sbjct: 1   MSRDRDPLSVGRVIGDVLDPFTKSIPLRVTYNSREVNNGCELKPSQVANQPRVDIGGEDL 60

Query: 61  RTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFV 120
           RTFYTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG E V YESPRPT+GIHRFV
Sbjct: 61  RTFYTLVMVDPDAPSPSDPSLREYLHWLVTDIPATTGASFGHETVCYESPRPTMGIHRFV 120

Query: 121 FVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           FVLFRQ  +Q V APGWRQNF+ +DFAE+YNLGSPVAAVYFNCQRE+GS   RR
Sbjct: 121 FVLFRQLGRQTVYAPGWRQNFNTRDFAEVYNLGSPVAAVYFNCQRESGSGGRRR 174

Source: Populus tremula

Species: Populus tremula

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|348499908|gb|AEP69110.1| flowering locus T-like protein [Eucalyptus globulus]

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 135/171 (78%), Positives = 151/171 (88%)

Query: 4   DRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTF 63
           DRDPLV+GRV+GDVLD FTR+I L V Y+ ++V N CELKPS V+NQPR+EIGGDDLRTF
Sbjct: 6   DRDPLVVGRVIGDVLDAFTRSISLRVIYNNREVSNSCELKPSQVVNQPRIEIGGDDLRTF 65

Query: 64  YTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVL 123
           YTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+EIV YESPRP++GIHRFVFVL
Sbjct: 66  YTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGASFGQEIVCYESPRPSMGIHRFVFVL 125

Query: 124 FRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           FRQ  +Q V APGWRQNF+ +DFAELYNLGSPVAA+YFNCQRE+GS   RR
Sbjct: 126 FRQLGRQTVYAPGWRQNFNTRDFAELYNLGSPVAALYFNCQRESGSGGRRR 176

Source: Eucalyptus globulus

Species: Eucalyptus globulus

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|221048110|gb|ACL98164.1| flowering locus T [Malus x domestica] gi|289526315|dbj|BAI77728.1| flowering locus T like protein [Malus x domestica] gi|289526317|dbj|BAI77729.1| flowering locus T like protein [Malus x domestica] gi|311213980|gb|ADP69290.1| FT-like protein 2 [Malus x domestica]

 Score =  290 bits (741), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 138/174 (79%), Positives = 151/174 (86%)

Query: 1   MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDL 60
           M  DRDPLV+GRVVGDVLD FTR++ L VTY  K+V NGCELKPS V++QPRV+ GGDDL
Sbjct: 1   MPRDRDPLVVGRVVGDVLDPFTRSVSLRVTYGNKEVNNGCELKPSQVVHQPRVDTGGDDL 60

Query: 61  RTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFV 120
           RTFYTLVMVDPDAPSPSDP L+EYLHWLVTDIP TT ASFG+EIV YESPRPTVGIHRFV
Sbjct: 61  RTFYTLVMVDPDAPSPSDPNLKEYLHWLVTDIPATTAASFGQEIVCYESPRPTVGIHRFV 120

Query: 121 FVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           FVLFRQ  +Q V APGWRQNF+ +DFAELYNLG PVAAVYFNCQRE+GS   RR
Sbjct: 121 FVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 174

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|345500376|dbj|BAK74837.1| flowering locus T [Pyrus pyrifolia] gi|440546388|dbj|BAJ11577.3| flowering locus T [Pyrus pyrifolia var. culta]

 Score =  289 bits (740), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 138/174 (79%), Positives = 150/174 (86%)

Query: 1   MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDL 60
           M  DRDPLV+GRVVGDVLD FTR++ L VTY  K+V NGCELKPS V+ QPRV+ GGDDL
Sbjct: 1   MPRDRDPLVVGRVVGDVLDPFTRSVSLRVTYGNKEVNNGCELKPSQVVQQPRVDTGGDDL 60

Query: 61  RTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFV 120
           RTFYTLVMVDPDAPSPSDP L+EYLHWLVTDIP TT ASFG+EIV YESPRPTVGIHRFV
Sbjct: 61  RTFYTLVMVDPDAPSPSDPNLKEYLHWLVTDIPATTAASFGQEIVCYESPRPTVGIHRFV 120

Query: 121 FVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           FVLFRQ  +Q V APGWRQNF+ +DFAELYNLG PVAAVYFNCQRE+GS   RR
Sbjct: 121 FVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRR 174

Source: Pyrus pyrifolia

Species: Pyrus pyrifolia

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444242624|gb|AGD93126.1| flowering locus T [Camellia sinensis] gi|449082927|dbj|BAM83573.1| flowering locus T [Camellia sinensis]

 Score =  289 bits (740), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 137/174 (78%), Positives = 152/174 (87%)

Query: 1   MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDL 60
           M  DRDPLV+GRV+GDVLD FTR+I L VTYS ++V NGCEL+PS V+ QPRV+IGGDDL
Sbjct: 1   MPRDRDPLVVGRVIGDVLDPFTRSISLRVTYSSREVTNGCELRPSQVVIQPRVDIGGDDL 60

Query: 61  RTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFV 120
           RTFYTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+E+V YESPRP++GIHRFV
Sbjct: 61  RTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGASFGQEVVCYESPRPSMGIHRFV 120

Query: 121 FVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
            VLFRQ  +Q V APGWRQNF+ +DFAELYNLGSPVAAVYFNCQRETGS   RR
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRETGSGGRRR 174

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
UNIPROTKB|Q93WI9	179	HD3A "Protein HEADING DATE 3A"	0.966	0.960	0.774	3.3e-70
UNIPROTKB|Q93WM7	179	Hd3a "Hd3a protein" [Oryza sat	0.966	0.960	0.774	3.3e-70
UNIPROTKB|Q8VWH2	178	HD3B "Protein HEADING DATE 3B"	0.966	0.966	0.720	1.5e-65
TAIR|locus:2034168	175	FT "AT1G65480" [Arabidopsis th	0.949	0.965	0.686	6.2e-62
TAIR|locus:2005521	175	TSF "AT4G20370" [Arabidopsis t	0.949	0.965	0.680	5e-60
UNIPROTKB|Q9XGS5	173	Fdr2 "Cen-like protein FDR2" [	0.966	0.994	0.611	5.5e-54
UNIPROTKB|Q9XGS4	173	Fdr1 "Cen-like protein FDR1" [	0.966	0.994	0.605	8e-53
UNIPROTKB|Q6ESF8	173	P0605D08.14 "Os02g0531600 prot	0.966	0.994	0.611	1e-52
TAIR|locus:2174058	177	BFT "brother of FT and TFL1" [	0.971	0.977	0.564	8.3e-51
TAIR|locus:2150595	177	TFL1 "TERMINAL FLOWER 1" [Arab	0.915	0.920	0.614	1.7e-50

UNIPROTKB|Q93WI9 HD3A "Protein HEADING DATE 3A" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 134/173 (77%), Positives = 147/173 (84%)

Query:     2 SG-DRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDL 60
             SG DRDPLV+GRVVGDVLD F R+  L VTY  K V NGCELKPS V +QPRVE+GG+D+
Sbjct:     4 SGRDRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDM 63

Query:    61 RTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFV 120
             RTFYTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+E++ YESPRPT+GIHR V
Sbjct:    64 RTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLV 123

Query:   121 FVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASR 173
             FVLF+Q  +Q V APGWRQNF+ KDFAELYNLGSPVAAVYFNCQRE GS   R
Sbjct:   124 FVLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRR 176

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048572 "short-day photoperiodism" evidence=IMP

GO:0048575 "short-day photoperiodism, flowering" evidence=IMP

UNIPROTKB|Q93WM7 Hd3a "Hd3a protein" [Oryza sativa Indica Group (taxid:39946)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 134/173 (77%), Positives = 147/173 (84%)

Query:     2 SG-DRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDL 60
             SG DRDPLV+GRVVGDVLD F R+  L VTY  K V NGCELKPS V +QPRVE+GG+D+
Sbjct:     4 SGRDRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDM 63

Query:    61 RTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFV 120
             RTFYTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+E++ YESPRPT+GIHR V
Sbjct:    64 RTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLV 123

Query:   121 FVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASR 173
             FVLF+Q  +Q V APGWRQNF+ KDFAELYNLGSPVAAVYFNCQRE GS   R
Sbjct:   124 FVLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRR 176

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048572 "short-day photoperiodism" evidence=IMP

UNIPROTKB|Q8VWH2 HD3B "Protein HEADING DATE 3B" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 124/172 (72%), Positives = 141/172 (81%)

Query:     2 SGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLR 61
             SG  DPLV+GR+VGDVLD F R   L V+Y  + V NGCELKPS V  QPRV +GG+D+R
Sbjct:     4 SGRDDPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDMR 63

Query:    62 TFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVF 121
             TFYTLVMVDPDAPSPS+P LREYLHWLVTDIP TT A+FG+E++ YESPRPT+GIHR VF
Sbjct:    64 TFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVF 123

Query:   122 VLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASR 173
             VLF+Q  +Q V APGWRQNFS ++FAELYNLGSPVA VYFNCQRE GS   R
Sbjct:   124 VLFQQLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRR 175

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048573 "photoperiodism, flowering" evidence=IMP

TAIR|locus:2034168 FT "AT1G65480" [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 116/169 (68%), Positives = 137/169 (81%)

Query:     5 RDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFY 64
             RDPL++ RVVGDVLD F R+I L VTY  ++V NG +L+PS V N+PRVEIGG+DLR FY
Sbjct:     6 RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query:    65 TLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLF 124
             TLVMVDPD PSPS+P LREYLHWLVTDIP TT  +FG EIV YE+P PT GIHR VF+LF
Sbjct:    66 TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query:   125 RQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASR 173
             RQ  +Q V APGWRQNF+ ++FAE+YNLG PVAAV++NCQRE+G    R
Sbjct:   126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

GO:0009911 "positive regulation of flower development" evidence=IMP

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0048573 "photoperiodism, flowering" evidence=IEP;RCA

GO:0009909 "regulation of flower development" evidence=IGI;RCA

GO:0010119 "regulation of stomatal movement" evidence=IMP

TAIR|locus:2005521 TSF "AT4G20370" [Arabidopsis thaliana (taxid:3702)]

 Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
 Identities = 115/169 (68%), Positives = 131/169 (77%)

Query:     5 RDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFY 64
             RDPLV+G VVGDVLD FTR + L VTY  ++V NG +L+PS V+N+P VEIGGDD R FY
Sbjct:     6 RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query:    65 TLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLF 124
             TLVMVDPD PSPS+P  REYLHWLVTDIP TT  +FG E+V YESPRP  GIHR V VLF
Sbjct:    66 TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query:   125 RQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASR 173
             RQ  +Q V APGWRQ F+ ++FAE+YNLG PVAA YFNCQRE G    R
Sbjct:   126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

GO:0005575 "cellular_component" evidence=ND

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009911 "positive regulation of flower development" evidence=IMP

GO:0009909 "regulation of flower development" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

UNIPROTKB|Q9XGS5 Fdr2 "Cen-like protein FDR2" [Oryza sativa (taxid:4530)]

 Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
 Identities = 107/175 (61%), Positives = 137/175 (78%)

Query:     1 MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEIGGDD 59
             MS   +PLV+GRV+G+VLD F   + ++VTY S K V NG EL PSAV+++PRVE+ G D
Sbjct:     1 MSRSVEPLVVGRVIGEVLDTFNPCMKMIVTYNSNKLVFNGHELYPSAVVSKPRVEVQGGD 60

Query:    60 LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRF 119
             LR+F+TLVM DPD P PSDP LRE+LHW+VTDIP TT+ASFG+E++SYESP+P +GIHRF
Sbjct:    61 LRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVISYESPKPNIGIHRF 120

Query:   120 VFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
             +FVLF+Q  +Q V  P +R +F+ + FAE  +LG PVAAVYFN QRET  +A RR
Sbjct:   121 IFVLFKQKRRQTVIVPSFRDHFNTRRFAEENDLGLPVAAVYFNAQRET--AARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IGI

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IGI

UNIPROTKB|Q9XGS4 Fdr1 "Cen-like protein FDR1" [Oryza sativa (taxid:4530)]

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 106/175 (60%), Positives = 135/175 (77%)

Query:     1 MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEIGGDD 59
             MS   +PLV+GRV+G+V+D+F     ++VTY S K V NG E  PSAV+++PRVE+ G D
Sbjct:     1 MSRSVEPLVVGRVIGEVIDSFNPCTKMIVTYNSNKLVFNGHEFYPSAVVSKPRVEVQGGD 60

Query:    60 LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRF 119
             +R+F+TLVM DPD P PSDP LRE+LHW+VTDIP TT+ASFG+EI+SYESP+P++GIHRF
Sbjct:    61 MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREIISYESPKPSIGIHRF 120

Query:   120 VFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
             VFVLF+Q  +Q V  P  R +F+ + FAE   LG PVAAVYFN QRET  +A RR
Sbjct:   121 VFVLFKQKRRQAVVVPSSRDHFNTRQFAEENELGLPVAAVYFNAQRET--AARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

UNIPROTKB|Q6ESF8 P0605D08.14 "Os02g0531600 protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 107/175 (61%), Positives = 131/175 (74%)

Query:     1 MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEIGGDD 59
             MS   +PL++G+V+G+VLDNF  T+ +  TY + K V NG E  PSAV  +PRVE+ G D
Sbjct:     1 MSRVLEPLIVGKVIGEVLDNFNPTVKMTATYGANKQVFNGHEFFPSAVAGKPRVEVQGGD 60

Query:    60 LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRF 119
             LR+F+TLVM DPD P PSDP LRE+LHW+VTDIP TT+ASFG+E+VSYESPRP +GIHRF
Sbjct:    61 LRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVVSYESPRPNIGIHRF 120

Query:   120 VFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
             + VLFRQ  +Q V  P  R  FS + FAE  +LG PVAAVYFN QRET  +A RR
Sbjct:   121 ILVLFRQKRRQAVSPPPSRDRFSTRQFAEDNDLGLPVAAVYFNAQRET--AARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

TAIR|locus:2174058 BFT "brother of FT and TFL1" [Arabidopsis thaliana (taxid:3702)]

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 100/177 (56%), Positives = 134/177 (75%)

Query:     1 MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKD-VKNGCELKPSAVINQPRVEIGGDD 59
             MS + +PL++GRV+GDVL+ F  ++ + VT++    V NG EL PS ++++PRVEIGG D
Sbjct:     1 MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query:    60 LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRF 119
             LR+F+TL+M+DPDAPSPS+P +REYLHW+VTDIP TT+ASFG+EIV YE+P+P  GIHR+
Sbjct:    61 LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query:   120 VFVLFRQHVKQNV-CAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRRP 175
             VF LF+Q  +Q V  AP  R+ F+   F+  + L  PVAAVYFN QRET  +  RRP
Sbjct:   121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRET--APRRRP 175

GO:0005737 "cytoplasm" evidence=ISM

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009908 "flower development" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

TAIR|locus:2150595 TFL1 "TERMINAL FLOWER 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 102/166 (61%), Positives = 131/166 (78%)

Query:     6 DPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYT 65
             +PL++GRVVGDVLD FT T  + V+Y+ K V NG EL PS+V ++PRVEI G DLR+F+T
Sbjct:    10 EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query:    66 LVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFR 125
             LVM+DPD P PSDP L+E+LHW+VT+IP TT+A+FGKE+VSYE PRP++GIHRFVFVLFR
Sbjct:    70 LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

Query:   126 QHVKQNVCAPGW--RQNFSCKDFAELYNLGSPVAAVYFNCQRETGS 169
             Q  ++ V  P    R +F+ + FA  Y+LG PVAAV+FN QRET +
Sbjct:   130 QK-QRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAA 174

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=IMP

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=IMP

GO:0031982 "vesicle" evidence=IDA

GO:0090344 "negative regulation of cell aging" evidence=IMP

GO:0003712 "transcription cofactor activity" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93WI9	HD3A_ORYSJ	No assigned EC number	0.7764	0.9550	0.9497	yes	no
Q9XH43	CET2_TOBAC	No assigned EC number	0.6257	0.9382	0.9542	N/A	no
Q8VWH2	HD3B_ORYSJ	No assigned EC number	0.7209	0.9662	0.9662	no	no
Q9SXZ2	FT_ARATH	No assigned EC number	0.6863	0.9494	0.9657	yes	no
O82088	SELFP_SOLLC	No assigned EC number	0.5847	0.9325	0.9485	N/A	no
Q9XH42	CET4_TOBAC	No assigned EC number	0.6081	0.9325	0.9485	N/A	no
Q9XH44	CET1_TOBAC	No assigned EC number	0.5529	0.9325	0.9540	N/A	no
Q41261	CEN_ANTMA	No assigned EC number	0.5852	0.9325	0.9171	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	178
PLN00169	175	PLN00169, PLN00169, CETS family protein; Provision	1e-113
cd00866	154	cd00866, PEBP_euk, PhosphatidylEthanolamine-Bindin	1e-43
pfam01161	147	pfam01161, PBP, Phosphatidylethanolamine-binding p	8e-27
cd00457	159	cd00457, PEBP, PhosphatidylEthanolamine-Binding Pr	1e-15
COG1881	174	COG1881, COG1881, Phospholipid-binding protein [Ge	6e-05
cd00865	150	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-	1e-04

>gnl|CDD|177765 PLN00169, PLN00169, CETS family protein; Provisional

 Score =  319 bits (820), Expect = e-113
 Identities = 135/174 (77%), Positives = 150/174 (86%)

Query: 1   MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDL 60
              DRDPLV+GRVVGDVLD FTR+I L VTY  ++V NGCELKPS V+NQPRV+IGG+DL
Sbjct: 2   SPRDRDPLVVGRVVGDVLDPFTRSISLRVTYGSREVNNGCELKPSQVVNQPRVDIGGEDL 61

Query: 61  RTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFV 120
           RTFYTLVMVDPDAPSPS+P LREYLHWLVTDIP TT A+FG+E+V YESPRPT GIHRFV
Sbjct: 62  RTFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPATTGATFGQEVVCYESPRPTAGIHRFV 121

Query: 121 FVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           FVLFRQ  +Q V APGWRQNF+ +DFAELYNLGSPVAAVYFNCQRE+GS   R 
Sbjct: 122 FVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGSGGRRP 175

Length = 175

>gnl|CDD|176644 cd00866, PEBP_euk, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes

 Score =  141 bits (358), Expect = 1e-43
 Identities = 62/153 (40%), Positives = 77/153 (50%), Gaps = 15/153 (9%)

Query: 26  PLMVTYSGKD-VKNGCELKPSAVINQPRVEIGGDDLRT-FYTLVMVDPDAPSPSDPGLRE 83
            L V+Y     V  G  L PS     P V    +D     YTLVMVDPDAPS  DP  RE
Sbjct: 2   DLTVSYGSSGVVTPGNLLTPSETQKAPTVSFSSEDPPDKLYTLVMVDPDAPSRDDPKFRE 61

Query: 84  YLHWLVTDIP----ETTEASFGKEIVSYESPRPTV--GIHRFVFVLFRQH-------VKQ 130
           +LHWLVT+IP     T   S G+ +V Y  P P    G HR+VF+LF+Q         K 
Sbjct: 62  WLHWLVTNIPGSDTTTGLVSKGEVLVPYLGPGPPKGTGPHRYVFLLFKQPGGLDFPESKL 121

Query: 131 NVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNC 163
              +   R+ F  ++FA+   LG PVAA +F  
Sbjct: 122 PPTSGLGRRGFDVREFAKKNGLGLPVAANFFQV 154

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). Length = 154

>gnl|CDD|216338 pfam01161, PBP, Phosphatidylethanolamine-binding protein

 Score = 98.7 bits (246), Expect = 8e-27
 Identities = 52/151 (34%), Positives = 71/151 (47%), Gaps = 20/151 (13%)

Query: 26  PLMVTYSGKDVKNGCELKPSAVI-NQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREY 84
           PL V Y+G  V  G  L P     + P +  G       Y LVMVDPDAPS SDP   E+
Sbjct: 3   PLPVEYTGAFVCPGNNLSPPLSWSDAPTISDGTK----SYALVMVDPDAPSRSDPKGSEF 58

Query: 85  LHWLVTDIPETTEA----------SFGKEIVSYESPRP--TVGIHRFVFVLFRQHVKQNV 132
           LHWLVT+IP +              FG+ +  Y  P P    G HR+VF+L+    K ++
Sbjct: 59  LHWLVTNIPASVTELPGGGVQGVNDFGQTLAGYIGPCPPPGTGPHRYVFLLYALDEKLDL 118

Query: 133 CAPGWRQNFSCKDFAELYNLGSP-VAAVYFN 162
            A   R     ++  + + LG   +A  +F 
Sbjct: 119 PAGVTRAEL--REAFKGHVLGPATLAGNFFR 147

Length = 147

>gnl|CDD|176642 cd00457, PEBP, PhosphatidylEthanolamine-Binding Protein (PEBP) domain

 Score = 70.1 bits (172), Expect = 1e-15
 Identities = 35/139 (25%), Positives = 44/139 (31%), Gaps = 32/139 (23%)

Query: 51  PRVEIGG-DDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEA----------- 98
           P +   G       Y LVM DPDAP       R  +H LV  IP    +           
Sbjct: 27  PSLSWDGPPPDVKEYVLVMEDPDAPLG-----RPIVHGLVYGIPANKTSLSNDDFVVTDN 81

Query: 99  -SFGKEIV----------SYESPRPTV--GIHRFVFVLFRQHVKQNVCAPGW-RQNFSCK 144
              G +             Y  PRP +  G HR+ F ++      +    G  R  F   
Sbjct: 82  GKGGLQGGFKYGKNRGGTVYIGPRPPLGHGPHRYFFQVYALDEPLDRSKLGDGRTKFEVA 141

Query: 145 DFAELYNLGSPVAAVYFNC 163
            FAE   LG  V       
Sbjct: 142 RFAEGNVLG-AVGEWVGQF 159

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). A number of biological roles for members of the PEBP family include serine protease inhibition, membrane biogenesis, regulation of flowering plant stem architecture, and Raf-1 kinase inhibition. Although their overall structures are similar, the members of the PEBP family bind very different substrates including phospholipids, opioids, and hydrophobic odorant molecules as well as having different oligomerization states (monomer/dimer/tetramer). Length = 159

>gnl|CDD|224793 COG1881, COG1881, Phospholipid-binding protein [General function prediction only]

 Score = 41.2 bits (97), Expect = 6e-05
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 26/85 (30%)

Query: 64  YTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEA------------------SFGKEIV 105
           + L + DPDAP+        ++HW+V +IP                        FG    
Sbjct: 63  FALTVDDPDAPTGG-----GWVHWVVANIPADVTELPEGSGPKSKIGIVQGINDFGS--R 115

Query: 106 SYESPRPTVG-IHRFVFVLFRQHVK 129
            Y  P P  G  HR+ F ++   V+
Sbjct: 116 GYGGPCPPKGHGHRYYFTVYALDVE 140

Length = 174

>gnl|CDD|176643 cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 27/81 (33%)

Query: 64  YTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEA-------------------SFGKEI 104
             L++ DPDAP+        ++HW+V +IP  T                      FG+  
Sbjct: 42  LALIVEDPDAPTGGG-----FVHWVVWNIPADTTELPEGASRGALPAGAVQGRNDFGE-- 94

Query: 105 VSYESPRP-TVGIHRFVFVLF 124
             Y  P P   G HR+VF ++
Sbjct: 95  AGYGGPCPPDGGPHRYVFTVY 115

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members. Length = 150

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	178
PLN00169	175	CETS family protein; Provisional	100.0
KOG3346	185	consensus Phosphatidylethanolamine binding protein	100.0
cd00866	154	PEBP_euk PhosphatidylEthanolamine-Binding Protein	100.0
PF01161	146	PBP: Phosphatidylethanolamine-binding protein; Int	99.96
cd00457	159	PEBP PhosphatidylEthanolamine-Binding Protein (PEB	99.92
cd00865	150	PEBP_bact_arch PhosphatidylEthanolamine-Binding Pr	99.73
PRK10257	158	putative kinase inhibitor protein; Provisional	99.69
TIGR00481	141	Raf kinase inhibitor-like protein, YbhB/YbcL famil	99.68
PRK09818	183	putative kinase inhibitor; Provisional	99.65
COG1881	174	Phospholipid-binding protein [General function pre	99.63

>PLN00169 CETS family protein; Provisional

Probab=100.00  E-value=3.1e-54  Score=337.09  Aligned_cols=172  Identities=78%  Similarity=1.320  Sum_probs=161.0

Q ss_pred             CCCCCCccccCCcccccCCCCCCCeeEEEEECCeecCCCcccCcccccCCCeEEEecCCCCceEEEEEECCCCCCCCCCC
Q 030371            1 MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPG   80 (178)
Q Consensus         1 ~~~~~~~l~~~~Iipdvl~~f~P~~~L~V~f~~~~V~~G~~l~~~~~~~~P~i~~~~~~~~~~ytlvmiDpDap~~~~~~   80 (178)
                      |..++++|++++||||||+.|.|+..|+|+|++..|.+|+.|++++++++|+|+|.+.+.+++|||+|+|||+|++.+++
T Consensus         2 ~~~~~~~l~~~~iipdvid~f~P~~~L~V~y~s~~V~~G~~l~p~~t~~~P~i~~~~~~~~~~ytlim~DpDaP~~~~~~   81 (175)
T PLN00169          2 SPRDRDPLVVGRVVGDVLDPFTRSISLRVTYGSREVNNGCELKPSQVVNQPRVDIGGEDLRTFYTLVMVDPDAPSPSNPN   81 (175)
T ss_pred             CcccccchhhCCcCCcccCCcCCceEEEEEECCcCcCCcCCCCHHHhccCCEEEEccCCCCceeEEEEECCCCCCCCCCC
Confidence            55679999999999999999999999999999999999999999999999999998776689999999999999999999


Q ss_pred             CcceEEEEEEccCCCcccCCCceeeeccCCCCCCCCCcEEEEEeeeCCccccCCCCCCCCCCHHHHHHHhCCCCceEEEE
Q 030371           81 LREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVY  160 (178)
Q Consensus        81 ~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~G~HRYvflL~~Q~~~~~~~~~~~R~~Fn~~~F~~~~~L~~Pva~~~  160 (178)
                      +++||||++.||+++.....|+++++|+||.|++|+|||+|+||+|++.+....+..|.+||+++|++++||+.||||||
T Consensus        82 ~~~~~HW~v~nip~~~~~~~g~~~~~Y~~P~Pp~G~HRYvflly~Q~~~~~~~~~~~R~~F~~~~Fa~~~~L~~PvA~nf  161 (175)
T PLN00169         82 LREYLHWLVTDIPATTGATFGQEVVCYESPRPTAGIHRFVFVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGSPVAAVY  161 (175)
T ss_pred             cccEEEEEEeCCccccccccCccceeecCCCCCCCceeEEEEEEEcCCCcccCCcccCCCcCHHHHHHHhCCCCceEEEE
Confidence            99999999999998865567999999999999999999999999999988765677899999999999999999999999


Q ss_pred             EEEeeCCCCCcc
Q 030371          161 FNCQRETGSSAS  172 (178)
Q Consensus       161 f~~~~d~~~~~~  172 (178)
                      |++||++.+-+|
T Consensus       162 F~a~~~~~~~~~  173 (175)
T PLN00169        162 FNCQRESGSGGR  173 (175)
T ss_pred             EEEecCCcCCcc
Confidence            999999977666

>KOG3346 consensus Phosphatidylethanolamine binding protein [General function prediction only]

Probab=100.00  E-value=1.7e-52  Score=327.47  Aligned_cols=175  Identities=47%  Similarity=0.756  Sum_probs=163.9

Q ss_pred             CCCCCCccccCCcccccCCCCCCCeeEEEEECC-eecCCCcccCcccccCCCeEEEecC-CCCceEEEEEECCCCCCCCC
Q 030371            1 MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSG-KDVKNGCELKPSAVINQPRVEIGGD-DLRTFYTLVMVDPDAPSPSD   78 (178)
Q Consensus         1 ~~~~~~~l~~~~Iipdvl~~f~P~~~L~V~f~~-~~V~~G~~l~~~~~~~~P~i~~~~~-~~~~~ytlvmiDpDap~~~~   78 (178)
                      |+..++.+.+++||+|+|+.+.|...|+|+|++ ..|++|+.|+++++++.|.|+|.+. +.+++|||||+|||||++++
T Consensus         1 ~~~~~~~~~~~~iv~Dvl~~~~p~~~l~V~y~~~~~v~~G~~l~pt~~~~~P~v~~~~~a~~~~~yTLvm~DPDaPsr~~   80 (185)
T KOG3346|consen    1 MSDIRDPLNKHRIVPDVLDDFEPSVKLNVTYNSDIVVENGNELTPTQVKNRPIVSWDGFADPGSLYTLVMTDPDAPSRSD   80 (185)
T ss_pred             CcchhhhhhccCcchhhhccCCCceEEEEEeCCCeeecCCCEeCchhhccCCeEEEcCcCCCCCeEEEEEeCCCCCCCCC
Confidence            677889999999999999999999999999986 8999999999999999999999985 78999999999999999999


Q ss_pred             CCCcceEEEEEEccCCCcccCCCceeeeccCCCCC--CCCCcEEEEEeeeCCccccCC--CCCCCCCCHHHHHHHhCCCC
Q 030371           79 PGLREYLHWLVTDIPETTEASFGKEIVSYESPRPT--VGIHRFVFVLFRQHVKQNVCA--PGWRQNFSCKDFAELYNLGS  154 (178)
Q Consensus        79 ~~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~--~G~HRYvflL~~Q~~~~~~~~--~~~R~~Fn~~~F~~~~~L~~  154 (178)
                      |++++|||||++|||++.+.+.|++++.|++|.|+  +|.|||+||||+|+.+.....  +..|.+||+++|+++++|++
T Consensus        81 p~~rE~lHWlV~nIPg~~~~~~G~~i~~Y~~P~Pp~~tG~HRyVfll~rQ~~~~~~~~~~~~~R~~F~~~~F~~~~~lg~  160 (185)
T KOG3346|consen   81 PKFREWLHWLVTNIPGTDGISKGQEISEYLGPGPPKGTGLHRYVFLLYRQPGRLDSDEPSPLSRGNFNTRKFAKKYELGT  160 (185)
T ss_pred             CcceeEEEEEEEeecCCccccCCeEeeeeeCCCCCCCCCceEEEEEEEEcCCccccccCCCCcccceeHHHHHHHhccCC
Confidence            99999999999999999668899999999999999  789999999999999987643  57899999999999999999


Q ss_pred             ceEEEEEEEeeCCCCCccccc
Q 030371          155 PVAAVYFNCQRETGSSASRRP  175 (178)
Q Consensus       155 Pva~~~f~~~~d~~~~~~~~~  175 (178)
                      ||||+||++|||+...+++..
T Consensus       161 PvA~~~f~aq~d~~~~~~~~~  181 (185)
T KOG3346|consen  161 PVAGNFFQAQWDDYVPKLYKQ  181 (185)
T ss_pred             chhhheehhhcchhhHHHHHh
Confidence            999999999999988777644

>cd00866 PEBP_euk PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes

Probab=100.00  E-value=1.4e-38  Score=243.78  Aligned_cols=138  Identities=43%  Similarity=0.723  Sum_probs=125.8

Q ss_pred             eEEEEECC-eecCCCcccCcccccCCCeEEEecCC-CCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCcc----cC
Q 030371           26 PLMVTYSG-KDVKNGCELKPSAVINQPRVEIGGDD-LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTE----AS   99 (178)
Q Consensus        26 ~L~V~f~~-~~V~~G~~l~~~~~~~~P~i~~~~~~-~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~----~~   99 (178)
                      .|.|+|++ ..|.+|+.+++++++.+|+|+|.... .+++|+|||+|||+|.+.++.++++||||++||+.+..    ..
T Consensus         2 ~l~v~y~~~~~v~~G~~l~~~~~~~~P~i~~~~~~~~~~~y~lvm~DpD~p~~~~~~~~~~lHwl~~ni~~~~~~~~~~~   81 (154)
T cd00866           2 DLTVSYGSSGVVTPGNLLTPSETQKAPTVSFSSEDPPDKLYTLVMVDPDAPSRDDPKFREWLHWLVTNIPGSDTTTGLVS   81 (154)
T ss_pred             eEEEEECCCcCcCCCCCCCHHHhCcCCeEEEecCCCCCCeEEEEEECCCCCCCCCCCCCCEEEEEEeCcCCccccccccC
Confidence            68999998 89999999999999999999999885 68999999999999999999999999999999998753    34


Q ss_pred             CCceeeeccCCCCCC--CCCcEEEEEeeeCCccccCC-------CCCCCCCCHHHHHHHhCCCCceEEEEEEE
Q 030371          100 FGKEIVSYESPRPTV--GIHRFVFVLFRQHVKQNVCA-------PGWRQNFSCKDFAELYNLGSPVAAVYFNC  163 (178)
Q Consensus       100 ~g~~~~~Y~~P~P~~--G~HRYvflL~~Q~~~~~~~~-------~~~R~~Fn~~~F~~~~~L~~Pva~~~f~~  163 (178)
                      .|..+++|+||+|+.  |+|||+|+||+|++.+.+..       ...|.+||+++|++++||+.|||+|||++
T Consensus        82 ~~~~~~~Y~~P~Pp~g~g~HRY~fll~~q~~~~~~~~~~~~~~~~~~r~~F~~~~F~~~~~L~~pva~~~f~~  154 (154)
T cd00866          82 KGEVLVPYLGPGPPKGTGPHRYVFLLFKQPGGLDFPESKLPPTSGLGRRGFDVREFAKKNGLGLPVAANFFQV  154 (154)
T ss_pred             CCCCcceeeCCCCCCCCCCccEEEEEEEeCCccCccccccccCCccccCCcCHHHHHHHhCCCCcEEEEEEeC
Confidence            678999999999995  69999999999999987643       46799999999999999999999999985

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer).

>PF01161 PBP: Phosphatidylethanolamine-binding protein; InterPro: IPR008914 The PEBP (PhosphatidylEthanolamine-Binding Protein) family is a highly conserved group of proteins that have been identified in numerous tissues in a wide variety of organisms, including bacteria, yeast, nematodes, plants, drosophila and mammals

Probab=99.96  E-value=2.8e-29  Score=190.57  Aligned_cols=129  Identities=36%  Similarity=0.604  Sum_probs=105.5

Q ss_pred             eeEEEEE-CCeecCCCcccCccc-ccCCCeEEEecCCCCceEEEEEECCCCCCCCCCCCcceEEEEEEccC---------
Q 030371           25 IPLMVTY-SGKDVKNGCELKPSA-VINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIP---------   93 (178)
Q Consensus        25 ~~L~V~f-~~~~V~~G~~l~~~~-~~~~P~i~~~~~~~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~---------   93 (178)
                      ..|.|+| ++..+..|+.+++.. ++..|+       .+++|+|+|+|||+|.+.+++.+++||||++||+         
T Consensus         2 ~~L~v~f~~~~~~~~G~~~sp~~~~~~~P~-------~~~~y~lim~D~D~P~~~~~~~~~~~Hwl~~ni~~~~~~~~~~   74 (146)
T PF01161_consen    2 GKLPVKFTGNKSVCPGNNVSPPLSWQNAPT-------GTKSYTLIMVDPDAPSRENPSFGPFLHWLVTNIPSTELPEGSD   74 (146)
T ss_dssp             CEEEEEECTTEECSTTEEEEGGGECSS-TC-------TTSEEEEEEEETTSSBTTSCTTTSEEEEEEEEEETSEE-TTSS
T ss_pred             cCcCceeEcccccCCCCCCCcCcccccCCC-------CCcEEEEEEECCCCCccccCCCCcEEEEEEcCCCCccCCCCCC
Confidence            4699999 788999999999999 888887       5789999999999999989999999999999999         


Q ss_pred             CC-cc-cCCCceeeeccCCCCC--CCCCcEEEEEeeeCCccccCCCCCCCCCCHHHHHHHhCCCCc-eEEEEEE
Q 030371           94 ET-TE-ASFGKEIVSYESPRPT--VGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSP-VAAVYFN  162 (178)
Q Consensus        94 ~~-~~-~~~g~~~~~Y~~P~P~--~G~HRYvflL~~Q~~~~~~~~~~~R~~Fn~~~F~~~~~L~~P-va~~~f~  162 (178)
                      .. .. ...|..+++|.||+|+  +|.|||+|+||+|++.+.+  ......+++++.+++++|+.+ +|++|||
T Consensus        75 ~~~~~~~~~g~~~~~Y~~P~Pp~g~g~HrY~f~ly~q~~~~~l--~~~~~~~~~~~~~~~~~L~~~~l~~~y~r  146 (146)
T PF01161_consen   75 GARQGINSSGQVIAPYLGPCPPKGSGPHRYVFLLYAQPSPLPL--SDGATKFDLREAFKGHGLGPASLAGNYFR  146 (146)
T ss_dssp             TCETSBGGTSEEEES--SB-SSTTSSCEEEEEEEEEESSSSTS--GBSSTHHTHHHHHHHTTEESEESEEEEEE
T ss_pred             ccEecccccCccccEEcCCcCcCcCCCceEEEEEEEcCCCCCC--CCCCCHHHHHHHHHcCCCCCceEEEEEEC
Confidence            10 01 1236678999999999  5699999999999997655  223456889999999999987 8999997

The various functions described for members of this family include lipid binding, neuronal development [], serine protease inhibition [], the control of the morphological switch between shoot growth and flower structures [], and the regulation of several signalling pathways such as the MAP kinase pathway [], and the NF-kappaB pathway []. The control of the latter two pathways involves the PEBP protein RKIP, which interacts with MEK and Raf-1 to inhibit the MAP kinase pathway, and with TAK1, NIK, IKKalpha and IKKbeta to inhibit the NF-kappaB pathway. Other PEBP-like proteins that show strong structural homology to PEBP include Escherichia coli YBHB and YBCL, the Rattus norvegicus (Rat) neuropeptide HCNP, and Antirrhinum majus (Garden snapdragon) protein centroradialis (CEN). Structures have been determined for several members of the PEBP-like family, all of which show extensive fold conservation. The structure consists of a large central beta-sheet flanked by a smaller beta-sheet on one side, and an alpha helix on the other. Sequence alignments show two conserved central regions, CR1 and CR2, that form a consensus signature for the PEBP family. These two regions form part of the ligand-binding site, which can accommodate various anionic groups. The N- and C-terminal regions are the least conserved, and may be involved in interactions with different protein partners. The N-terminal residues 2-12 form the natural cleavage peptide HCNP involved in neuronal development. The C-terminal region is deleted in plant and bacterial PEBP homologues, and may help control accessibility to the active site. ; PDB: 1BD9_A 1BEH_A 2QYQ_A 2L7W_A 3AXY_A 2IQX_C 2IQY_A 1KN3_A 1FUX_A 1B7A_A ....

>cd00457 PEBP PhosphatidylEthanolamine-Binding Protein (PEBP) domain

Probab=99.92  E-value=2.3e-24  Score=166.51  Aligned_cols=122  Identities=32%  Similarity=0.417  Sum_probs=98.0

Q ss_pred             ecCC-CcccCc----ccccCCCeEEEecCC-CCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCccc----------
Q 030371           35 DVKN-GCELKP----SAVINQPRVEIGGDD-LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEA----------   98 (178)
Q Consensus        35 ~V~~-G~~l~~----~~~~~~P~i~~~~~~-~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~~----------   98 (178)
                      .+.. |+.|+.    ......|.|+|++.+ .+++|+|+|+|||+|..     ++|+||+++||+.+...          
T Consensus         6 ~~~~~g~~lp~~~~~~g~~~sP~l~w~~~p~~t~s~ali~~DpDap~~-----~~~~HWvv~nIp~~~~~~~~~~~~~~~   80 (159)
T cd00457           6 EVGPSGSVLPPEYSFEGVGRFPSLSWDGPPPDVKEYVLVMEDPDAPLG-----RPIVHGLVYGIPANKTSLSNDDFVVTD   80 (159)
T ss_pred             CcCCCCCccChhhccCCCCcCCceEecCCCCCCeEEEEEEECCCCCCC-----CCceEEEEeccCcccccccccccccCC
Confidence            4455 777777    777778999999875 68999999999999843     48999999999986411          


Q ss_pred             --CCCc----------eeeeccCCCCCC--CCCcEEEEEeeeCCccccCC-CCCCCCCCHHHHHHHhCCCCceEEEEEE
Q 030371           99 --SFGK----------EIVSYESPRPTV--GIHRFVFVLFRQHVKQNVCA-PGWRQNFSCKDFAELYNLGSPVAAVYFN  162 (178)
Q Consensus        99 --~~g~----------~~~~Y~~P~P~~--G~HRYvflL~~Q~~~~~~~~-~~~R~~Fn~~~F~~~~~L~~Pva~~~f~  162 (178)
                        ..+.          ....|.||+||.  |.|||+|+||+|+..+.+.. ...|..|++.+|++.+.|+ ++|.++++
T Consensus        81 ~~~~~~~~~n~~g~~~~~~~Y~GP~PP~G~g~HrY~f~lyald~~~~~~~~~~~~~~~~~~~~~~~~vL~-~~a~~~~~  158 (159)
T cd00457          81 NGKGGLQGGFKYGKNRGGTVYIGPRPPLGHGPHRYFFQVYALDEPLDRSKLGDGRTKFEVARFAEGNVLG-AVGEWVGQ  158 (159)
T ss_pred             CCccceeccccccccCCCcCCcCCCCCCCCCCeeEEEEEEEecCccccccccCCCCHHHHHHHHHhCeee-EEEEEEEE
Confidence              1111          234999999996  58999999999999887542 3578999999999999997 78998876

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). A number of biological roles for members of the PEBP family include serine protease inhibition, membrane biogenesis, regulation of flowering plant stem architecture, and Raf-1 kinase inhibition. Although their overall structures are similar, the members of the PEBP family bind very different substrates including phospholipids, opioids, and hydrophobic odorant molecules as well as having different oligomerization states (monomer/dimer/tetramer).

>cd00865 PEBP_bact_arch PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

Probab=99.73  E-value=7e-17  Score=123.51  Aligned_cols=95  Identities=26%  Similarity=0.417  Sum_probs=76.5

Q ss_pred             cCCCeEEEecCC-CCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCc-ccCCC----------------ceeeeccC
Q 030371           48 INQPRVEIGGDD-LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETT-EASFG----------------KEIVSYES  109 (178)
Q Consensus        48 ~~~P~i~~~~~~-~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~-~~~~g----------------~~~~~Y~~  109 (178)
                      ...|.|+|+..+ .+++|+|+|+|||+|..     ..|+||+++||+.+. ....|                .....|.|
T Consensus        25 ~~SP~l~w~~~p~~t~s~al~m~D~Dap~~-----~~~~HW~~~nIp~~~~~i~~g~~~~~~~~~~~~g~n~~~~~~Y~g   99 (150)
T cd00865          25 NVSPPLSWSGVPAGTKSLALIVEDPDAPTG-----GGFVHWVVWNIPADTTELPEGASRGALPAGAVQGRNDFGEAGYGG   99 (150)
T ss_pred             CcCCCeEEcCCCCCCeEEEEEEEcCCCCCC-----CCEEEEEEeccCcccccccCCcccccCCCCCeEeecCCCCCeecC
Confidence            358999999874 68999999999999832     489999999999862 11111                24689999


Q ss_pred             CCCCC-CCCcEEEEEeeeCCccccCCCCCCCCCCHHHHHHHhCC
Q 030371          110 PRPTV-GIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNL  152 (178)
Q Consensus       110 P~P~~-G~HRYvflL~~Q~~~~~~~~~~~R~~Fn~~~F~~~~~L  152 (178)
                      |+|+. +.|||+|.||+++..+.+     ..+++..+++++..-
T Consensus       100 P~Pp~~~~HrY~f~vyAld~~l~~-----~~~~~~~~l~~ai~~  138 (150)
T cd00865         100 PCPPDGGPHRYVFTVYALDVPLLL-----PPGATRAELLFAMKG  138 (150)
T ss_pred             CCCcCCCceEEEEEEEEeCCccCC-----CCCCCHHHHHHHHhh
Confidence            99996 899999999999998765     367888888888654

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.

>PRK10257 putative kinase inhibitor protein; Provisional

Probab=99.69  E-value=7.3e-16  Score=118.85  Aligned_cols=93  Identities=22%  Similarity=0.378  Sum_probs=70.4

Q ss_pred             CCCeEEEecCC-CCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCccc-----C-------CCc-------eeeecc
Q 030371           49 NQPRVEIGGDD-LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEA-----S-------FGK-------EIVSYE  108 (178)
Q Consensus        49 ~~P~i~~~~~~-~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~~-----~-------~g~-------~~~~Y~  108 (178)
                      ..|.|+|++.+ .+++|+|+|.|||+|..     ..|+||+++|||++...     .       .|.       ....|.
T Consensus        30 ~SP~L~w~~~P~~t~s~ali~~DpDap~~-----~~~~HWvv~nIP~~~~~l~eg~~~~~~~~p~g~~~g~n~~g~~gY~  104 (158)
T PRK10257         30 ISPHLAWDDVPAGTKSFVVTCYDPDAPTG-----SGWWHWVVVNLPADTRVLPQGFGSGLVALPDGVLQTRTDFGKAGYG  104 (158)
T ss_pred             CCceEEEcCCCCCceEEEEEEECCCCCCC-----CcEEEEEEEcCCCCcccccCCCCcccccCCCCceeccccCCCccCc
Confidence            37999999874 47999999999999874     26999999999976210     0       011       146899


Q ss_pred             CCCCCCC-CCcEEEEEeeeC-CccccCCCCCCCCCCHHHHHHHhC
Q 030371          109 SPRPTVG-IHRFVFVLFRQH-VKQNVCAPGWRQNFSCKDFAELYN  151 (178)
Q Consensus       109 ~P~P~~G-~HRYvflL~~Q~-~~~~~~~~~~R~~Fn~~~F~~~~~  151 (178)
                      ||+||.| .|||+|.||+++ ..+.+.     .+++..++.++..
T Consensus       105 GP~PP~g~~HrY~f~vyALd~~~L~l~-----~~~~~~~l~~a~~  144 (158)
T PRK10257        105 GAAPPKGETHRYIFTVHALDVERIDVD-----EGASGAMVGFNVH  144 (158)
T ss_pred             CCCCccCCCceEEEEEEEecCcccCCC-----CCCCHHHHHHHHh
Confidence            9999987 799999999999 467653     3555666666554

>TIGR00481 Raf kinase inhibitor-like protein, YbhB/YbcL family

Probab=99.68  E-value=5.1e-16  Score=117.77  Aligned_cols=94  Identities=29%  Similarity=0.516  Sum_probs=74.1

Q ss_pred             CCCeEEEecC-CCCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCcc-----cC-------CC--------ceeeec
Q 030371           49 NQPRVEIGGD-DLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTE-----AS-------FG--------KEIVSY  107 (178)
Q Consensus        49 ~~P~i~~~~~-~~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~-----~~-------~g--------~~~~~Y  107 (178)
                      ..|.|+|+.. ..+++|+|+|+|||+|...     .|+||+++||+.+..     ..       .|        -....|
T Consensus        14 ~SP~l~w~~~P~~t~s~al~~~D~Dap~~~-----~~~HWv~~nIp~~~~~l~e~~~~~~~~~~~g~~~~g~n~~g~~~Y   88 (141)
T TIGR00481        14 ISPPLSWDGVPEGAKSLALTCIDPDAPTGC-----GWWHWVVVNIPADTTVLPENASSDDKRLPQGVPLQGRNDFGKSGY   88 (141)
T ss_pred             CCcEEEEcCCCCCceEEEEEEECCCCCCCC-----CeEEEEEecCCCCcccccCCccccccccCCcceeEeeccCCCccE
Confidence            4899999987 3579999999999998763     499999999997521     11       11        024699


Q ss_pred             cCCCCCCCCCcEEEEEeeeCCc-cccCCCCCCCCCCHHHHHHHhCC
Q 030371          108 ESPRPTVGIHRFVFVLFRQHVK-QNVCAPGWRQNFSCKDFAELYNL  152 (178)
Q Consensus       108 ~~P~P~~G~HRYvflL~~Q~~~-~~~~~~~~R~~Fn~~~F~~~~~L  152 (178)
                      .||+||.|.|||+|.||+++.. +.+.     .++...++.++..-
T Consensus        89 ~GP~PP~g~HrY~f~vyALd~~~l~l~-----~~~~~~~l~~ai~g  129 (141)
T TIGR00481        89 IGPCPPKGDHRYLFTVYALDTEKLDLD-----PGFSLADLGDAMEG  129 (141)
T ss_pred             eCCCCcCCCEEEEEEEEEecCCCCCCC-----CCCCHHHHHHHHhh
Confidence            9999999889999999999976 7653     47888888887654

>PRK09818 putative kinase inhibitor; Provisional

Probab=99.65  E-value=5.2e-15  Score=116.54  Aligned_cols=112  Identities=26%  Similarity=0.420  Sum_probs=79.0

Q ss_pred             EEEEECCeecCCCcccCcccc---------cCCCeEEEecCC-CCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCc
Q 030371           27 LMVTYSGKDVKNGCELKPSAV---------INQPRVEIGGDD-LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETT   96 (178)
Q Consensus        27 L~V~f~~~~V~~G~~l~~~~~---------~~~P~i~~~~~~-~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~   96 (178)
                      |.|+  +..+..|..|+...+         ...|.++|++.+ .+++|+|+|.|||+|..     ..|+||+++|||++.
T Consensus        22 ~~lt--S~~f~~G~~ip~~~~~~~~~~~G~n~SP~L~W~~~P~gtks~aLi~~DpDaP~g-----~~~~HWvv~nIP~~~   94 (183)
T PRK09818         22 FQVT--SNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGAPEGTKSFAVTVYDPDAPTG-----SGWWHWTVANIPATV   94 (183)
T ss_pred             EEEE--CcCccCcCCCCHHHcccccCCCCCCcceeEEEccCCCCcEEEEEEEECCCCCCC-----CcEEEEEEEcCCCCc
Confidence            5553  345567777775432         248999999874 57999999999999875     269999999999752


Q ss_pred             cc-------------CCCc-------eeeeccCCCCCCC--CCcEEEEEeeeC-CccccCCCCCCCCCCHHHHHHHh
Q 030371           97 EA-------------SFGK-------EIVSYESPRPTVG--IHRFVFVLFRQH-VKQNVCAPGWRQNFSCKDFAELY  150 (178)
Q Consensus        97 ~~-------------~~g~-------~~~~Y~~P~P~~G--~HRYvflL~~Q~-~~~~~~~~~~R~~Fn~~~F~~~~  150 (178)
                      ..             ..|.       ....|.||+||.|  .|||+|.||+.+ +.+.+.     .++...++.++.
T Consensus        95 ~~l~eg~~~~~~~~~~~g~~~g~N~~g~~gY~GP~PP~G~g~HrY~F~vyALd~~~l~l~-----~~~~~~~l~~~~  166 (183)
T PRK09818         95 TYLPADAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTDKIPVD-----SNSSGALVGYML  166 (183)
T ss_pred             cccCCCCcccccccCCCCCEEeecCCCCCceECCCCccCCCCEEEEEEEEEecCcccCCC-----CCCCHHHHHHHH
Confidence            10             0011       2358999999965  899999999998 446553     344555555554

>COG1881 Phospholipid-binding protein [General function prediction only]

Probab=99.63  E-value=2.7e-15  Score=117.23  Aligned_cols=105  Identities=24%  Similarity=0.484  Sum_probs=76.3

Q ss_pred             eecCCCcccCccc----ccCCCeEEEecC-CCCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCcc------c----
Q 030371           34 KDVKNGCELKPSA----VINQPRVEIGGD-DLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTE------A----   98 (178)
Q Consensus        34 ~~V~~G~~l~~~~----~~~~P~i~~~~~-~~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~------~----   98 (178)
                      ..+..|+.++..-    ....|.++|++. ..+++|+|+|.|||||+.     ..|+||++.||+++..      .    
T Consensus        28 ~~f~~g~~ip~~~t~~g~~~sPpl~ws~~P~~tkS~AL~v~DpDAP~g-----~~~~HWvv~nIp~~~~~~~~~~~~~~~  102 (174)
T COG1881          28 NAFADGAPIPDEYTCGGPNISPPLSWSGVPEGTKSFALTVDDPDAPTG-----GGWVHWVVANIPADVTELPEGSGPKSK  102 (174)
T ss_pred             hhhhCCCccchhhhcCCCCcCCceeecCCCCCCeeEEEEEECCCCCCC-----CcEEEEEEEccCCcccccccccccccc
Confidence            4566777766554    356888999987 468999999999999974     4899999999997311      0    


Q ss_pred             --------CCCceeeeccCCCCCCCC-CcEEEEEeeeCCccccCCCCCCCCCCHHHHHHH
Q 030371           99 --------SFGKEIVSYESPRPTVGI-HRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAEL  149 (178)
Q Consensus        99 --------~~g~~~~~Y~~P~P~~G~-HRYvflL~~Q~~~~~~~~~~~R~~Fn~~~F~~~  149 (178)
                              +.|.  ..|.||+||.|. |||.|.||+++-.....    -.+|+..++.+.
T Consensus       103 ~~~~qg~Nd~g~--~~Y~Gp~PP~g~~HrY~f~vyALd~~~~~~----~~g~~~~~~~~~  156 (174)
T COG1881         103 IGIVQGINDFGS--RGYGGPCPPKGHGHRYYFTVYALDVELLLL----PAGASGAELGKA  156 (174)
T ss_pred             cceEEeeccccc--cCcccCCCCCCCCeEEEEEEEEcccccccC----CCCCCHHHHHHH
Confidence                    1122  459999999876 99999999999764321    145555554443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	178
3axy_A	170	Structure Of Florigen Activation Complex Consisting		7e-74
1wkp_A	171	Flowering Locus T (Ft) From Arabidopsis Thaliana Le		2e-66
1wko_A	180	Terminal Flower 1 (Tfl1) From Arabidopsis Thaliana		4e-55
1qou_A	181	Cen (Centroradialis) Protein From Antirrhinum Lengt		2e-53
2jyz_A	179	Cg7054 Solution Structure Length = 179		1e-22
2iqx_A	187	Rat Phosphatidylethanolamine-Binding Protein Contai		1e-14
2iqy_A	190	Rat Phosphatidylethanolamine-Binding Protein Length		2e-14
1b7a_A	186	Structure Of The Phosphatidylethanolamine-Binding P		1e-13
1a44_A	185	Phosphatidylethanolamine Binding Protein From Calf		1e-13
1bd9_A	187	Human Phosphatidylethanolamine Binding Protein Leng		3e-13
1kn3_A	183	Murine Pebp-2 (Phosphatidylethanolamine-Binding Pro		1e-11
1wpx_B	220	Crystal Structure Of Carboxypeptidase Y Inhibitor C		8e-06
2r77_A	205	Crystal Structure Of Phosphatidylethanolamine-Bindi		1e-05
2gzq_A	200	Phosphatidylethanolamine-Binding Protein From Plasm		2e-04

>pdb|3AXY|A Chain A, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 170

Iteration: 1
 Score =  272 bits (696), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 128/163 (78%), Positives = 141/163 (86%)
Query: 4   DRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTF 63
           DRDPLV+GRVVGDVLD F R+  L VTY  K V NG ELKPS V +QPRVE+GG+D+RTF
Sbjct: 7   DRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGLELKPSMVTHQPRVEVGGNDMRTF 66
Query: 64  YTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVL 123
           YTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+E++SYESPRPT+GIHR VFVL
Sbjct: 67  YTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVFVL 126
Query: 124 FRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRE 166
           F+Q  +Q V APGWRQNF+ KDFAELYNLGSPVAAVYFN QRE
Sbjct: 127 FQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNSQRE 169

>pdb|1WKP|A Chain A, Flowering Locus T (Ft) From Arabidopsis Thaliana Length = 171

Iteration: 1
 Score =  247 bits (631), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 114/163 (69%), Positives = 134/163 (82%)
Query: 5   RDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFY 64
           RDPL++ RVVGDVLD F R+I L VTY  ++V NG  L+PS V N+PRVEIGG+DLR FY
Sbjct: 9   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLNLRPSQVQNKPRVEIGGEDLRNFY 68
Query: 65  TLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLF 124
           TLVMVDPD PSPS+P LREYLHWLVTDIP TT  +FG EIVSYE+P PT GIHR VF+LF
Sbjct: 69  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVSYENPSPTAGIHRVVFILF 128
Query: 125 RQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRET 167
           RQ  +Q V APGWRQNF+ ++FAE+YNLG PVAAV++N QRE+
Sbjct: 129 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNSQRES 171

>pdb|1WKO|A Chain A, Terminal Flower 1 (Tfl1) From Arabidopsis Thaliana Length = 180

Iteration: 1
 Score =  210 bits (534), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 102/166 (61%), Positives = 131/166 (78%), Gaps = 3/166 (1%)
Query: 6   DPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYT 65
           +PL++GRVVGDVLD FT T  + V+Y+ K V NG EL PS+V ++PRVEI G DLR+F+T
Sbjct: 13  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 72
Query: 66  LVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFR 125
           LVM+DPD P PSDP L+E+LHW+VT+IP TT+A+FGKE+VSYE PRP++GIHRFVFVLFR
Sbjct: 73  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 132
Query: 126 QHVKQNVCAPGW--RQNFSCKDFAELYNLGSPVAAVYFNCQRETGS 169
           Q  ++ V  P    R +F+ + FA  Y+LG PVAAV+FN QRET +
Sbjct: 133 QK-QRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAA 177

>pdb|1QOU|A Chain A, Cen (Centroradialis) Protein From Antirrhinum Length = 181

Iteration: 1
 Score =  204 bits (520), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 103/176 (58%), Positives = 131/176 (74%), Gaps = 10/176 (5%)
Query: 6   DPLVIGRVVGDVLDNFTRTIPLMVTYSG----KDVKNGCELKPSAVINQPRVEIGGDDLR 61
           DPLVIGRV+GDV+D+FT T+ + V Y+     K V NG EL PSAV + PRVE+ G D+R
Sbjct: 8   DPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMR 67
Query: 62  TFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVF 121
           +F+TL+M DPD P PSDP LRE+LHW+VTDIP TT++SFGKE+VSYE PRP +GIHRFVF
Sbjct: 68  SFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVF 127
Query: 122 VLFRQHVK-QNVCAPG--WRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           +LF+Q  + Q + +P    R  F+ + F +   LG PVAAV+FNCQRET   A+RR
Sbjct: 128 LLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRET---AARR 180

>pdb|2JYZ|A Chain A, Cg7054 Solution Structure Length = 179

Iteration: 1
 Score =  102 bits (254), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 87/163 (53%), Gaps = 12/163 (7%)
Query: 13  VVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRT-FYTLVMVDP 71
           +V DVLD        ++     +VK G EL P+ V +QP V   G + ++   TL+MVDP
Sbjct: 4   IVPDVLDAVPAGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVDP 63
Query: 72  DAPSPSDPGLREYLHWLVTDIPETTEA-SFGKEIVSY--ESPRPTVGIHRFVFVLFRQHV 128
           DAP+  DP  RE LHW V +IP + E  S G  +  Y    P    G+HR++F+L+RQ  
Sbjct: 64  DAPTRQDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQEN 123
Query: 129 K-------QNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQ 164
           K        N    G R NF+ +DFA  + LG P+AA Y+  Q
Sbjct: 124 KIEETPTISNTTRTG-RLNFNARDFAAKHGLGEPIAANYYQAQ 165

>pdb|2IQX|A Chain A, Rat Phosphatidylethanolamine-Binding Protein Containing The S153e Mutation In The Complex With O-Phosphorylethanolamine Length = 187

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 12/149 (8%)
Query: 27  LMVTYSGKDVKN-GCELKPSAVINQPR-VEIGGDDLRTFYTLVMVDPDAPSPSDPGLREY 84
           L V Y G  V   G  L P+ V+N+P  +   G D    YTLV+ DPDAPS  DP  RE+
Sbjct: 25  LRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREW 84
Query: 85  LHWLVTDIPETTEASFGKEIVSY--ESPRPTVGIHRFVFVLFRQHVKQNVCAP------- 135
            H+LV ++ +  + S G  +  Y    P    G+HR+V++++ Q    N   P       
Sbjct: 85  HHFLVVNM-KGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSG 143
Query: 136 GWRQNFSCKDFAELYNLGSPVAAVYFNCQ 164
             R  F  ++F + Y+LG+PVA   F  +
Sbjct: 144 DNRGKFKVEEFRKKYHLGAPVAGTCFQAE 172

>pdb|2IQY|A Chain A, Rat Phosphatidylethanolamine-Binding Protein Length = 190

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 27  LMVTYSGKDVKN-GCELKPSAVINQPR-VEIGGDDLRTFYTLVMVDPDAPSPSDPGLREY 84
           L V Y G  V   G  L P+ V+N+P  +   G D    YTLV+ DPDAPS  DP  RE+
Sbjct: 28  LRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREW 87
Query: 85  LHWLVTDIPETTEASFGKEIVSY--ESPRPTVGIHRFVFVLFRQHVKQNVCAP------- 135
            H+LV ++ +  + S G  +  Y    P    G+HR+V++++ Q    N   P       
Sbjct: 88  HHFLVVNM-KGNDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSG 146
Query: 136 GWRQNFSCKDFAELYNLGSPVAAVYFNCQ 164
             R  F  + F + Y+LG+PVA   F  +
Sbjct: 147 DNRGKFKVESFRKKYHLGAPVAGTCFQAE 175

>pdb|1B7A|A Chain A, Structure Of The Phosphatidylethanolamine-Binding Protein From Bovine Brain Length = 186

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 26  PLMVTYSGKDVKN-GCELKPSAVINQP-RVEIGGDDLRTFYTLVMVDPDAPSPSDPGLRE 83
           PL V Y G +V   G  L P+ V N+P  +   G D    YTLV+ DPDAPS  DP  RE
Sbjct: 23  PLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKDPKYRE 82
Query: 84  YLHWLVTDIPETTEASFGKEIVSY--ESPRPTVGIHRFVFVLFRQHVKQNVCAP------ 135
           + H+LV ++ +    S G  +  Y    P    G+HR+V++++ Q        P      
Sbjct: 83  WHHFLVVNM-KGNNISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRS 141
Query: 136 -GWRQNFSCKDFAELYNLGSPVAAVYFNCQ 164
              R  F    F + Y LG+PVA   +  +
Sbjct: 142 GDHRGKFKVASFRKKYELGAPVAGTCYQAE 171

>pdb|1A44|A Chain A, Phosphatidylethanolamine Binding Protein From Calf Brain Length = 185

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 26  PLMVTYSGKDVKN-GCELKPSAVINQP-RVEIGGDDLRTFYTLVMVDPDAPSPSDPGLRE 83
           PL V Y G +V   G  L P+ V N+P  +   G D    YTLV+ DPDAPS  DP  RE
Sbjct: 23  PLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKDPKYRE 82
Query: 84  YLHWLVTDIPETTEASFGKEIVSY--ESPRPTVGIHRFVFVLFRQHVKQNVCAP------ 135
           + H+LV ++ +    S G  +  Y    P    G+HR+V++++ Q        P      
Sbjct: 83  WHHFLVVNM-KGNNISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRS 141
Query: 136 -GWRQNFSCKDFAELYNLGSPVAAVYFNCQ 164
              R  F    F + Y LG+PVA   +  +
Sbjct: 142 GDHRGKFKVASFRKKYELGAPVAGTCYQAE 171

>pdb|1BD9|A Chain A, Human Phosphatidylethanolamine Binding Protein Length = 187

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 26  PLMVTYSGKDVKN-GCELKPSAVINQP-RVEIGGDDLRTFYTLVMVDPDAPSPSDPGLRE 83
           PL VTY+G  V   G  L P+ V N+P  +   G D    YTLV+ DPDAPS  DP  RE
Sbjct: 24  PLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSRKDPKYRE 83
Query: 84  YLHWLVTDIPETTEASFGKEIVSY--ESPRPTVGIHRFVFVLFRQHVKQNVCAP------ 135
           + H+LV ++ +  + S G  +  Y    P    G+HR+V++++ Q        P      
Sbjct: 84  WHHFLVVNM-KGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEPILSNRS 142
Query: 136 -GWRQNFSCKDFAELYNLGSPVAAVYFNCQ 164
              R  F    F + Y L +PVA   +  +
Sbjct: 143 GDHRGKFKVASFRKKYELRAPVAGTCYQAE 172

>pdb|1KN3|A Chain A, Murine Pebp-2 (Phosphatidylethanolamine-Binding Protein-2) Length = 183

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 27  LMVTYSGKDVKN-GCELKPSAVINQP-RVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREY 84
           L VTY+  +V+  G  L P+ V ++P  +   G D    YTL++ DPDAPS   P  RE+
Sbjct: 21  LRVTYTEAEVEELGQVLTPTQVKHRPGSISWDGLDPGKLYTLILTDPDAPSRKKPVYREW 80
Query: 85  LHWLVTDIPETTEASFGKEIVSY--ESPRPTVGIHRFVFVLFRQHVKQNVCAP------- 135
            H+LV ++ +  + S G  +  Y    P    G+HR+V+++++Q        P       
Sbjct: 81  HHFLVVNM-KGNDISSGNVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLRCDEPILTNRSG 139
Query: 136 GWRQNFSCKDFAELYNLGSPVAAVYFNCQRET 167
             R  F    F + Y+LG+PVA   +  + ++
Sbjct: 140 DHRGKFKTAAFRKKYHLGAPVAGTCYQAEWDS 171

>pdb|1WPX|B Chain B, Crystal Structure Of Carboxypeptidase Y Inhibitor Complexed With The Cognate Proteinase Length = 220

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 22/88 (25%)
Query: 58  DDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEAS---------FGKE----- 103
           DDL   +TLVM DPDAPS +D    E+ H +  D+    EA+         F  E     
Sbjct: 87  DDL---FTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKG 143
Query: 104 ---IVSYESPRPTVGI--HRFVFVLFRQ 126
              ++ Y  P P  G   HR+VF+L++Q
Sbjct: 144 SNTLIEYMGPAPPKGSGPHRYVFLLYKQ 171

>pdb|2R77|A Chain A, Crystal Structure Of Phosphatidylethanolamine-Binding Protein, Pfl0955c, From Plasmodium Falciparum Length = 205

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 19  DNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPR-VEIGGDDLRTF-YTLVMVDPDAPS 75
           D     + L +++ +GK+V +G  L  +   + PR ++   +    + + L MVDPD PS
Sbjct: 38  DKIDLNVDLFISFKAGKEVNHGNVLDIAGTGSVPRNIKFSEEPPDGYCFVLFMVDPDYPS 97
Query: 76  PSDPGLREYLHWLVTDIPETTEASFGKE-----IVSYESP--RPTVGIHR--FVFVLFRQ 126
              P  +EY+HW+V+ I +T E   G +     I+ Y  P  +   G+HR  F+  L ++
Sbjct: 98  RLRPDGKEYIHWVVSGI-KTKELIKGTQKNCVTILPYVGPSIKKGTGLHRISFIISLIKE 156
Query: 127 HVKQNVCA 134
             K N+  
Sbjct: 157 EDKDNITG 164

>pdb|2GZQ|A Chain A, Phosphatidylethanolamine-Binding Protein From Plasmodium Vivax Length = 200

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 19  DNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPR-VEIGGDDLRTF-YTLVMVDPDAPS 75
           +N   T+   +++ SGK+V +G  L  +   + PR ++   +    + Y L  +DPD PS
Sbjct: 31  ENVDLTVDXYISFKSGKEVNHGNILDLAGTGSVPRNIKFSEEPPEDYCYILFXIDPDFPS 90
Query: 76  PSDPGLREYLHWLVTDIPETTEASFGKE-----IVSYESP--RPTVGIHR--FVFVLFRQ 126
              P  R+Y+HW V+ I ++ E   G +     ++ Y  P  +   G+HR  F+  L ++
Sbjct: 91  RRRPDGRDYVHWAVSGI-KSKELVKGTDKNCITLLPYVGPSIKKGTGLHRISFILSLVKE 149
Query: 127 HVKQNVCA 134
             K NV  
Sbjct: 150 ENKGNVTG 157

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	178
3axy_A	170	Protein heading DATE 3A; phosphatidylethanolamine-	1e-74
1wko_A	180	Terminal flower 1 protein; CIS-peptide, PEBP, sign	5e-70
2jyz_A	179	CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo	8e-56
2gzq_A	200	Phosphatidylethanolamine-binding protein; structur	1e-54
1wpx_B	220	Carboxypeptidase Y inhibitor; carboxypeptidase inh	2e-52
2iqy_A	190	Phosphatidylethanolamine-binding protein 1; alpha-	7e-51
3n08_A	153	Putative phosphatidylethanolamine-binding protein;	2e-08
2evv_A	207	Hypothetical protein HP0218; alpha-beta structure,	2e-04

>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A Length = 170

 Score =  220 bits (562), Expect = 1e-74
 Identities = 128/163 (78%), Positives = 141/163 (86%)

Query: 4   DRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTF 63
           DRDPLV+GRVVGDVLD F R+  L VTY  K V NG ELKPS V +QPRVE+GG+D+RTF
Sbjct: 7   DRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGLELKPSMVTHQPRVEVGGNDMRTF 66

Query: 64  YTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVL 123
           YTLVMVDPDAPSPSDP LREYLHWLVTDIP TT ASFG+E++SYESPRPT+GIHR VFVL
Sbjct: 67  YTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVFVL 126

Query: 124 FRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRE 166
           F+Q  +Q V APGWRQNF+ KDFAELYNLGSPVAAVYFN QRE
Sbjct: 127 FQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNSQRE 169

>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A Length = 180

 Score =  209 bits (533), Expect = 5e-70
 Identities = 100/169 (59%), Positives = 131/169 (77%), Gaps = 1/169 (0%)

Query: 2   SGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLR 61
           +   +PL++GRVVGDVLD FT T  + V+Y+ K V NG EL PS+V ++PRVEI G DLR
Sbjct: 9   TRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLR 68

Query: 62  TFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVF 121
           +F+TLVM+DPD P PSDP L+E+LHW+VT+IP TT+A+FGKE+VSYE PRP++GIHRFVF
Sbjct: 69  SFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVF 128

Query: 122 VLFRQHVKQNVCAPGW-RQNFSCKDFAELYNLGSPVAAVYFNCQRETGS 169
           VLFRQ  ++ +      R +F+ + FA  Y+LG PVAAV+FN QRET +
Sbjct: 129 VLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAA 177

>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster} Length = 179

 Score =  173 bits (439), Expect = 8e-56
 Identities = 62/175 (35%), Positives = 87/175 (49%), Gaps = 12/175 (6%)

Query: 11  GRVVGDVLDNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEIGGDDLRT-FYTLVM 68
             +V DVLD       + V Y    +VK G EL P+ V +QP V   G + ++   TL+M
Sbjct: 2   DDIVPDVLDAVP-AGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLM 60

Query: 69  VDPDAPSPSDPGLREYLHWLVTDIPETTE-ASFGKEIVSYESPR--PTVGIHRFVFVLFR 125
           VDPDAP+  DP  RE LHW V +IP + E  S G  +  Y         G+HR++F+L+R
Sbjct: 61  VDPDAPTRQDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYR 120

Query: 126 QHVKQNV------CAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETGSSASRR 174
           Q  K              R NF+ +DFA  + LG P+AA Y+  Q +       +
Sbjct: 121 QENKIEETPTISNTTRTGRLNFNARDFAAKHGLGEPIAANYYQAQYDDYVPIRNK 175

>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A Length = 200

 Score =  170 bits (433), Expect = 1e-54
 Identities = 39/186 (20%), Positives = 67/186 (36%), Gaps = 24/186 (12%)

Query: 5   RDPLVIGRVVGDVLDN--FTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEI--GGDD 59
            + L   +++  V  +     T+ + +++ SGK+V +G  L  +   + PR         
Sbjct: 15  IEELKREKIIPHVFPDENVDLTVDMYISFKSGKEVNHGNILDLAGTGSVPRNIKFSEEPP 74

Query: 60  LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETT----EASFGKEIVSYESPRP--T 113
               Y L M+DPD PS   P  R+Y+HW V+ I               ++ Y  P     
Sbjct: 75  EDYCYILFMIDPDFPSRRRPDGRDYVHWAVSGIKSKELVKGTDKNCITLLPYVGPSIKKG 134

Query: 114 VGIHRFVFVLFRQHVKQNVCAPGW----------RQNFSCKDFAELYNLGS---PVAAVY 160
            G+HR  F+L     +      G           R  F+    A      +    V   +
Sbjct: 135 TGLHRISFILSLVKEENKGNVTGVPLYRGEHYITRVKFNNCQSAYNVIQMNDMKIVGFNW 194

Query: 161 FNCQRE 166
              +R+
Sbjct: 195 CQMRRK 200

>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1 Length = 220

 Score =  166 bits (420), Expect = 2e-52
 Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 48/212 (22%)

Query: 2   SGDRDPLVIGRVVGDVLDN--FTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEIGGD 58
               D      ++ DV+ +  F  +  L V Y S   V  G  L      ++P+ +   +
Sbjct: 10  QASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFN 69

Query: 59  DLR---------------TFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEA----- 98
                               +TLVM DPDAPS +D    E+ H +  D+    EA     
Sbjct: 70  KQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETS 129

Query: 99  ------------SFGKEIVSYESPRPTVGI--HRFVFVLFRQHVKQNV----------CA 134
                            ++ Y  P P  G   HR+VF+L++Q    +             
Sbjct: 130 GATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNW 189

Query: 135 PGWRQNFSCKDFAELYNLGSPVAAVYFNCQRE 166
                      +A+  NL   VA+ +F  + +
Sbjct: 190 GYGTPATGVGKWAKENNLQ-LVASNFFYAETK 220

>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A Length = 190

 Score =  160 bits (407), Expect = 7e-51
 Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 14/177 (7%)

Query: 1   MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKD-VKNGCELKPSAVINQPR-VEIGGD 58
           M+ D      G +    +D       L V Y G    + G  L P+ V+N+P  +   G 
Sbjct: 4   MAADISQWA-GPLSLQEVD-EPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGL 61

Query: 59  DLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSY--ESPRPTVGI 116
           D    YTLV+ DPDAPS  DP  RE+ H+LV ++    + S G  +  Y    P    G+
Sbjct: 62  DPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMK-GNDISSGTVLSEYVGSGPPKDTGL 120

Query: 117 HRFVFVLFRQHVKQNVCAP-------GWRQNFSCKDFAELYNLGSPVAAVYFNCQRE 166
           HR+V++++ Q    N   P         R  F  + F + Y+LG+PVA   F  + +
Sbjct: 121 HRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWD 177

>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} Length = 153

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 17/75 (22%)

Query: 64  YTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEA--------------SFGKEIVSYES 109
             L++ DPD P         ++HW+V ++                    + G+  + Y  
Sbjct: 44  LVLIVEDPDVPPSVRED-GLWIHWIVYNLSPVVSNLAEGAQIFAVQGLNTAGE--IGYCP 100

Query: 110 PRPTVGIHRFVFVLF 124
           P P    HR+ F  +
Sbjct: 101 PCPPDAKHRYYFYAY 115

>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori} Length = 207

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 35/93 (37%)

Query: 64  YTLVMVDPDAPSPSDPGLREYLHWLVTDIPETT----EASFGKEIVS------------- 106
           Y L ++D DA          ++HW+V +I         +   K IV              
Sbjct: 74  YALELIDHDAQKVCGMP---FVHWVVGNIAHNVLEENASMMDKRIVQGVNSLTQGFIRSP 130

Query: 107 ---------------YESPRPTVGIHRFVFVLF 124
                          Y  P P  G H ++  ++
Sbjct: 131 LNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVY 163

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	178
1wko_A	180	Terminal flower 1 protein; CIS-peptide, PEBP, sign	100.0
3axy_A	170	Protein heading DATE 3A; phosphatidylethanolamine-	100.0
2iqy_A	190	Phosphatidylethanolamine-binding protein 1; alpha-	100.0
2jyz_A	179	CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo	100.0
2gzq_A	200	Phosphatidylethanolamine-binding protein; structur	100.0
1wpx_B	220	Carboxypeptidase Y inhibitor; carboxypeptidase inh	100.0
1fux_A	166	Hypothetical 19.5 kDa protein in EMRE-RUS intergen	99.87
3n08_A	153	Putative phosphatidylethanolamine-binding protein;	99.86
1fjj_A	159	Hypothetical 17.1 kDa protein in MODC-BIOA interge	99.84
2evv_A	207	Hypothetical protein HP0218; alpha-beta structure,	99.79

>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A

Probab=100.00  E-value=1e-53  Score=335.13  Aligned_cols=167  Identities=60%  Similarity=0.995  Sum_probs=155.9

Q ss_pred             CCCCCCccccCCcccccCCCCCCCeeEEEEECCeecCCCcccCcccccCCCeEEEecCCCCceEEEEEECCCCCCCCCCC
Q 030371            1 MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPG   80 (178)
Q Consensus         1 ~~~~~~~l~~~~Iipdvl~~f~P~~~L~V~f~~~~V~~G~~l~~~~~~~~P~i~~~~~~~~~~ytlvmiDpDap~~~~~~   80 (178)
                      |+.+.++|++++||||+|+.|.|+..|+|+|++..|.+|+.|+++++..+|+|+|++.+.+++|||+|+|||+|++.+++
T Consensus         8 ~~~~~~~l~~~~vipdvl~~f~P~~~l~V~y~s~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DPDaP~~~~p~   87 (180)
T 1wko_A            8 GTRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMIDPDVPGPSDPF   87 (180)
T ss_dssp             --CTTHHHHHTTHHHHTBCCCCCCSEEEEEETTEECCTTCBCCGGGGSSCCEEEEESSCTTCEEEEEEEECSCSBTTBCT
T ss_pred             HHHHHHHHHhCCCCCCccCCcCCCeeEEEEECCeEcCCCCCcCHHHhCcCCeEEEecCCCCceEEEEEeCCCCCCCccCC
Confidence            67889999999999999999999999999999999999999999999999999999876567999999999999999999


Q ss_pred             CcceEEEEEEccCCCcccCCCceeeeccCCCCCCCCCcEEEEEeeeCCccccCC-CCCCCCCCHHHHHHHhCCCCceEEE
Q 030371           81 LREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVCA-PGWRQNFSCKDFAELYNLGSPVAAV  159 (178)
Q Consensus        81 ~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~G~HRYvflL~~Q~~~~~~~~-~~~R~~Fn~~~F~~~~~L~~Pva~~  159 (178)
                      +++|+|||++||+++.+...|..+++|.||+|++|.|||+|+||+|+..+.+.+ +..|.+||+++|+++++|+.|||+|
T Consensus        88 ~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp~G~HRYvf~ly~q~~~l~~~~~~~~R~~F~~~~F~~~~~Lg~PVa~~  167 (180)
T 1wko_A           88 LKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAV  167 (180)
T ss_dssp             TCCEEEEEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECCTTCCCCCCCCCSTTCCHHHHHHHTTCCSEEEEE
T ss_pred             CccEEEEEEeccCcCccccCCceeeeeCCCCCCCCceEEEEEEEecCCccCCCCCccccCCcCHHHHHHHhCCCCcEEEE
Confidence            999999999999998655678999999999999999999999999999887765 6789999999999999999999999


Q ss_pred             EEEEeeCC
Q 030371          160 YFNCQRET  167 (178)
Q Consensus       160 ~f~~~~d~  167 (178)
                      ||++|||+
T Consensus       168 fF~~q~d~  175 (180)
T 1wko_A          168 FFNAQRET  175 (180)
T ss_dssp             EEEECCC-
T ss_pred             EEEEEECC
Confidence            99999998

>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A

Probab=100.00  E-value=6.2e-53  Score=328.02  Aligned_cols=166  Identities=77%  Similarity=1.257  Sum_probs=157.4

Q ss_pred             CCCCCCccccCCcccccCCCCCCCeeEEEEECCeecCCCcccCcccccCCCeEEEecCCCCceEEEEEECCCCCCCCCCC
Q 030371            1 MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPG   80 (178)
Q Consensus         1 ~~~~~~~l~~~~Iipdvl~~f~P~~~L~V~f~~~~V~~G~~l~~~~~~~~P~i~~~~~~~~~~ytlvmiDpDap~~~~~~   80 (178)
                      |+. +++|++++||||||+.|.|+..|+|+|++..|.+|+.|+++++..+|+|+|++.+.+++|||+|+|||+|++.+++
T Consensus         5 m~~-~~~l~~~~vipdvl~~F~P~~~l~v~y~s~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DpDaP~~~~p~   83 (170)
T 3axy_A            5 MRD-RDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGLELKPSMVTHQPRVEVGGNDMRTFYTLVMVDPDAPSPSDPN   83 (170)
T ss_dssp             CCT-TCHHHHTTHHHHTBCCCCCCSCEEEEETTEECCTTEECCGGGSSSCCEEEECCSCTTCEEEEEEEETTCSCTTSCT
T ss_pred             cch-hchhhhCCccccccCCcCCceEEEEEECCeEcCCCCEeCHHHhCcCCeEEEeCCCCCcEEEEEEECCCCCCCccCC
Confidence            653 8999999999999999999999999999999999999999999999999999876689999999999999999999


Q ss_pred             CcceEEEEEEccCCCcccCCCceeeeccCCCCCCCCCcEEEEEeeeCCccccCCCCCCCCCCHHHHHHHhCCCCceEEEE
Q 030371           81 LREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVY  160 (178)
Q Consensus        81 ~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~G~HRYvflL~~Q~~~~~~~~~~~R~~Fn~~~F~~~~~L~~Pva~~~  160 (178)
                      +++|+|||++||+++.+...|+.+++|.||+|++|.|||+|+||+|+..+++.++..|.+||+++|+++++|+.|||+||
T Consensus        84 ~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp~G~HRY~f~ly~q~~~l~~~~p~~R~~F~~~~F~~~~~Lg~Pva~~f  163 (170)
T 3axy_A           84 LREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVFVLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVY  163 (170)
T ss_dssp             TCSEEEEEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECSSCCCCCCCSCSTTCCHHHHHHHTTCCSCSEEEE
T ss_pred             CccEEEEEEeCCCCCccccCCceeceecCCCCCCCcEEEEEEEEecCCccCCCCccccCCcCHHHHHHHhCCCCcEEEEE
Confidence            99999999999999866677889999999999999999999999999998887788999999999999999999999999


Q ss_pred             EEEeeCC
Q 030371          161 FNCQRET  167 (178)
Q Consensus       161 f~~~~d~  167 (178)
                      |++|||.
T Consensus       164 F~~q~d~  170 (170)
T 3axy_A          164 FNSQREA  170 (170)
T ss_dssp             EEECCCC
T ss_pred             EEEEecC
Confidence            9999984

>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A

Probab=100.00  E-value=1.4e-48  Score=308.41  Aligned_cols=170  Identities=29%  Similarity=0.506  Sum_probs=156.5

Q ss_pred             CCCcccc--CCcccccCCCCCCCeeEEEEE-CCeecCCCcccCcccccCCCe-EEEecCCCCceEEEEEECCCCCCCCCC
Q 030371            4 DRDPLVI--GRVVGDVLDNFTRTIPLMVTY-SGKDVKNGCELKPSAVINQPR-VEIGGDDLRTFYTLVMVDPDAPSPSDP   79 (178)
Q Consensus         4 ~~~~l~~--~~Iipdvl~~f~P~~~L~V~f-~~~~V~~G~~l~~~~~~~~P~-i~~~~~~~~~~ytlvmiDpDap~~~~~   79 (178)
                      +.++|++  ++||||||+. .|+..|+|+| ++..|.+|+.|+++++...|+ |+|++.+.+++|||+|+|||+|++.++
T Consensus         4 ~~~~~~~~~~~vipdvl~~-~p~~~l~v~~~~~~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~ytlvm~DpDaP~~~~p   82 (190)
T 2iqy_A            4 MAADISQWAGPLSLQEVDE-PPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDP   82 (190)
T ss_dssp             SSCCGGGTTSTTCGGGTSS-CCSEECEEECSSCBCCSTTEECCGGGGSSCCSEEECTTCCTTSEEEEEEEESSSSCSSSC
T ss_pred             HHHHHHHhcCccCCcCcCC-CCCceEEEEECCCcccCCCCEECHHHHhCCCceEEEccCCCCCEEEEEEECCCCCCCCCC
Confidence            4688999  9999999998 9999999999 557899999999999999999 999987657999999999999999999


Q ss_pred             CCcceEEEEEEccCCCcccCCCceeeeccCCCCC--CCCCcEEEEEeeeCCccccCC-------CCCCCCCCHHHHHHHh
Q 030371           80 GLREYLHWLVTDIPETTEASFGKEIVSYESPRPT--VGIHRFVFVLFRQHVKQNVCA-------PGWRQNFSCKDFAELY  150 (178)
Q Consensus        80 ~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~--~G~HRYvflL~~Q~~~~~~~~-------~~~R~~Fn~~~F~~~~  150 (178)
                      ++++|+|||++||+++ +...|..+++|.||+|+  +|.|||+|+||+|+..+++.+       +..|.+||+++|++++
T Consensus        83 ~~~~~~HWlv~nIp~~-~~~~G~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~~~~~~l~~~~~~~R~~F~~~~F~~~~  161 (190)
T 2iqy_A           83 KFREWHHFLVVNMKGN-DISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKKY  161 (190)
T ss_dssp             TTCCEEEEEEEEEETT-BGGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCSCCBCTTCCTTCSSCCHHHHHHHT
T ss_pred             CcCCEEEEEEeCCChh-ccccCccccceeCCCCcCCCCceEEEEEEEEeCCccCcchhhccCCCcccCCCcCHHHHHHHh
Confidence            9999999999999988 66779999999999999  568999999999999876542       4689999999999999


Q ss_pred             CCCCceEEEEEEEeeCCCCCccccc
Q 030371          151 NLGSPVAAVYFNCQRETGSSASRRP  175 (178)
Q Consensus       151 ~L~~Pva~~~f~~~~d~~~~~~~~~  175 (178)
                      +|+.|||+|||++|||+++..+++.
T Consensus       162 ~Lg~pVA~~fF~~q~d~~v~~~~~~  186 (190)
T 2iqy_A          162 HLGAPVAGTCFQAEWDDSVPKLHDQ  186 (190)
T ss_dssp             TCCSCSEEEEEEECCCTTHHHHHHH
T ss_pred             CCCCeeEEEEEEEEccCchHHHHHH
Confidence            9999999999999999999888764

>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster}

Probab=100.00  E-value=1.9e-47  Score=299.31  Aligned_cols=164  Identities=38%  Similarity=0.644  Sum_probs=148.9

Q ss_pred             CCcccccCCCCCCCeeEEEEEC-CeecCCCcccCcccccCCCeEEEecCCC-CceEEEEEECCCCCCCCCCCCcceEEEE
Q 030371           11 GRVVGDVLDNFTRTIPLMVTYS-GKDVKNGCELKPSAVINQPRVEIGGDDL-RTFYTLVMVDPDAPSPSDPGLREYLHWL   88 (178)
Q Consensus        11 ~~Iipdvl~~f~P~~~L~V~f~-~~~V~~G~~l~~~~~~~~P~i~~~~~~~-~~~ytlvmiDpDap~~~~~~~~~~lHwl   88 (178)
                      ++||||||+. .|+..|+|+|+ +..|.+|+.|+++++...|+|+|++.+. +++|||+|+|||+|++.++++++|+|||
T Consensus         2 ~~vipdvl~~-~P~~~l~V~y~~~~~v~~G~~l~~~~~~~~P~l~~~~~p~~t~~ytlvm~DpDaP~~~~p~~~~~~HWl   80 (179)
T 2jyz_A            2 DDIVPDVLDA-VPAGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVDPDAPTRQDPKYREILHWS   80 (179)
T ss_dssp             CCBTTTTBSS-CCSEECEEESSSSCCBCTTEECCSSCTTSCCEEECTTTCCSCSEEEEEEECCCSSCTTCCSSCCCSCCE
T ss_pred             CcccCcCcCC-CCcCeEEEEECCCcccCCCCEeCHHHhccCCeEEEeCCCCCceeEEEEEeCCCCCCCccCCCccEEEEE
Confidence            6899999999 99999999996 4789999999999999999999998743 4999999999999999999999999999


Q ss_pred             EEccCCCc-ccCCCceeeeccCCCCC--CCCCcEEEEEeeeCCccccC-------CCCCCCCCCHHHHHHHhCCCCceEE
Q 030371           89 VTDIPETT-EASFGKEIVSYESPRPT--VGIHRFVFVLFRQHVKQNVC-------APGWRQNFSCKDFAELYNLGSPVAA  158 (178)
Q Consensus        89 v~ni~~~~-~~~~g~~~~~Y~~P~P~--~G~HRYvflL~~Q~~~~~~~-------~~~~R~~Fn~~~F~~~~~L~~Pva~  158 (178)
                      ++||+++. +...|..+++|.||+|+  +|.|||+|+||+|+..++ .       .+..|.+||+++|+++++|+.|||+
T Consensus        81 v~nIp~~~~~l~~g~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~-~~~~l~~~~~~~R~~F~~~~F~~~~~Lg~pvA~  159 (179)
T 2jyz_A           81 VVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQENKIE-ETPTISNTTRTGRLNFNARDFAAKHGLGEPIAA  159 (179)
T ss_dssp             EECCCTTSSSTTSSEEEECCCSCCSCGGGCSEEEEEEEEEECSCCC-CSSCBCTTCCSSSCCCCTHHHHHHTTCCSCSEE
T ss_pred             EECCCCCccccCcccccccccCCCCCCCCCceEEEEEEEEcCCcCC-chhhccCCCcccCCCcCHHHHHHHhCCCCccEE
Confidence            99999874 45678999999999999  568999999999998776 2       2468999999999999999999999


Q ss_pred             EEEEEeeCCCCCcccccc
Q 030371          159 VYFNCQRETGSSASRRPV  176 (178)
Q Consensus       159 ~~f~~~~d~~~~~~~~~~  176 (178)
                      |||++|||+++..+|...
T Consensus       160 ~~F~~q~d~~v~~~~~~~  177 (179)
T 2jyz_A          160 NYYQAQYDDYVPIRNKTI  177 (179)
T ss_dssp             EEEEECCCTHHHHHHHTC
T ss_pred             EEEEEEecCchHHHHHHh
Confidence            999999999998877543

>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A

Probab=100.00  E-value=3.2e-45  Score=291.21  Aligned_cols=163  Identities=25%  Similarity=0.456  Sum_probs=143.5

Q ss_pred             CCCCCccccCCcccccCC--CCCCCeeEEEEEC-CeecCCCcccCcccccCCCe-EEEecCC-CCceEEEEEECCCCCCC
Q 030371            2 SGDRDPLVIGRVVGDVLD--NFTRTIPLMVTYS-GKDVKNGCELKPSAVINQPR-VEIGGDD-LRTFYTLVMVDPDAPSP   76 (178)
Q Consensus         2 ~~~~~~l~~~~Iipdvl~--~f~P~~~L~V~f~-~~~V~~G~~l~~~~~~~~P~-i~~~~~~-~~~~ytlvmiDpDap~~   76 (178)
                      +.++++|++++|||||||  .|+|++.|+|+|+ +..|.+|+.|+++++.+.|+ |+|++.+ .+++|||+|+|||||++
T Consensus        12 ~~~~~~l~~~~IipDvl~~~~f~p~~~L~V~y~~~~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~~ytLvm~DPDaP~~   91 (200)
T 2gzq_A           12 PPTIEELKREKIIPHVFPDENVDLTVDMYISFKSGKEVNHGNILDLAGTGSVPRNIKFSEEPPEDYCYILFMIDPDFPSR   91 (200)
T ss_dssp             SCCHHHHHHTTHHHHTSSSSCCCCCCCEEEEEETTEEECSSCEEESTTCSSCCSEEEESSCCCTTEEEEEEEEETTCSCS
T ss_pred             HHHHHHHHhCCccCcccCCCCCcceeEEEEEECCCcccCCCCEeCHHHHhCCCceEEEccCCCCCceEEEEEECCCCCCC
Confidence            356889999999999996  4999999999997 68999999999999999999 9999874 47999999999999999


Q ss_pred             CCCCCcceEEEEEEccCCCcccCCC-----ceeeeccCCCCC--CCCCcEEEEEe--eeCCccccCC---C-----CCCC
Q 030371           77 SDPGLREYLHWLVTDIPETTEASFG-----KEIVSYESPRPT--VGIHRFVFVLF--RQHVKQNVCA---P-----GWRQ  139 (178)
Q Consensus        77 ~~~~~~~~lHwlv~ni~~~~~~~~g-----~~~~~Y~~P~P~--~G~HRYvflL~--~Q~~~~~~~~---~-----~~R~  139 (178)
                      .++++++|||||++||+++. ...|     ..+++|.||+|+  +|.|||+|+||  +|++.+++..   .     ..|.
T Consensus        92 ~~~~~~~~~HWlv~nIp~~~-~~~g~~~~~~~~~~Y~gP~Pp~g~g~HRYvF~l~~fkQ~~~~~~~~~p~~~~~~~~~R~  170 (200)
T 2gzq_A           92 RRPDGRDYVHWAVSGIKSKE-LVKGTDKNCITLLPYVGPSIKKGTGLHRISFILSLVKEENKGNVTGVPLYRGEHYITRV  170 (200)
T ss_dssp             SCCTTCSEEEEEEEEECSSE-EETTCCTTCEEEECCCCCCCCTTSCCEEEEEEEEEEEGGGTTCBTTBCCCCCGGGCCTT
T ss_pred             CCCCCCCEEEEEEeCCCcCc-ccCCccCCCcceeeeeCCCCcCCCCcceEEEEEEEecccCcccccccCccccccccccC
Confidence            99999999999999999873 2233     379999999997  57899999985  9998876532   1     3799


Q ss_pred             CCCHH----HHHHHhCCCCceEEEEEEEeeC
Q 030371          140 NFSCK----DFAELYNLGSPVAAVYFNCQRE  166 (178)
Q Consensus       140 ~Fn~~----~F~~~~~L~~Pva~~~f~~~~d  166 (178)
                      +||++    +|++++|| .|||+|||++|++
T Consensus       171 ~F~~~~gv~~F~~~~gL-~pVganfF~~~n~  200 (200)
T 2gzq_A          171 KFNNCQSAYNVIQMNDM-KIVGFNWCQMRRK  200 (200)
T ss_dssp             HHHHTCCHHHHHHHTTC-EEEEEEEEEEECC
T ss_pred             ccccchhhHHHHHHcCC-EEEEEEEEEEecC
Confidence            99997    89999999 6899999999974

>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1

Probab=100.00  E-value=1.7e-44  Score=290.83  Aligned_cols=162  Identities=28%  Similarity=0.443  Sum_probs=143.2

Q ss_pred             CCCccccCCcccccCCC--CCCCeeEEEEECC-eecCCCcccCcccccCCCeEEEec----------C-----CCCceEE
Q 030371            4 DRDPLVIGRVVGDVLDN--FTRTIPLMVTYSG-KDVKNGCELKPSAVINQPRVEIGG----------D-----DLRTFYT   65 (178)
Q Consensus         4 ~~~~l~~~~Iipdvl~~--f~P~~~L~V~f~~-~~V~~G~~l~~~~~~~~P~i~~~~----------~-----~~~~~yt   65 (178)
                      ++++|++++||||||+.  |.|+..|+|+|++ ..|.+|+.|+++++...|+|+|..          .     ..+++|+
T Consensus        12 ~~~~l~~~~IipDvl~~~~F~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~~~~~~~~~~~~~~~~p~~~~~~~   91 (220)
T 1wpx_B           12 SIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDLFT   91 (220)
T ss_dssp             HHHHHHHTTHHHHTSCCTTCCCSEEEEEEEETTEEECSSCBCCGGGGSSCCEEEEEEETTCC------CCCCCCSSCCEE
T ss_pred             HHHHHHhCCCCccccCCcCCCCceEEEEEECCCcEeCCCCCcCHHHhcCCCeeEeCCCCCcccccccccccCCCCCceEE
Confidence            46899999999999998  9999999999986 779999999999999999999882          2     2579999


Q ss_pred             EEEECCCCCCCCCCCCcceEEEEEEccCCCcc---------------c-CCC-ceeeeccCCCCC--CCCCcEEEEEeee
Q 030371           66 LVMVDPDAPSPSDPGLREYLHWLVTDIPETTE---------------A-SFG-KEIVSYESPRPT--VGIHRFVFVLFRQ  126 (178)
Q Consensus        66 lvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~---------------~-~~g-~~~~~Y~~P~P~--~G~HRYvflL~~Q  126 (178)
                      |+|+|||||++.++++++|+||+++||+++..               . +.| ...++|.||+|+  +|.|||+|+||+|
T Consensus        92 lvm~DpDaP~~~~p~~~~~~HW~v~nIp~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~Y~gP~Pp~g~g~HRY~f~lya~  171 (220)
T 1wpx_B           92 LVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQ  171 (220)
T ss_dssp             EEEEESSSSCSSCCTTCSEEEEEEEEEEECC---------CCEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEEEC
T ss_pred             EEEECCCCCCCCCCCcCcEEEEEEEccCCCccccccccCCCCccceEeecCCccccccccCCCCccCCCCceEEEEEEec
Confidence            99999999999999999999999999997521               0 235 688999999999  4689999999999


Q ss_pred             CCcccc---CCCCCCCCCC-------HHHHHHHhCCCCceEEEEEEEeeC
Q 030371          127 HVKQNV---CAPGWRQNFS-------CKDFAELYNLGSPVAAVYFNCQRE  166 (178)
Q Consensus       127 ~~~~~~---~~~~~R~~Fn-------~~~F~~~~~L~~Pva~~~f~~~~d  166 (178)
                      +..+++   ..+..|.+||       +++|++++|| .|||+|||++||+
T Consensus       172 ~~~l~~~~~~~~~~R~~f~~~~~~f~~~~F~~~~~L-~pVAanfF~~q~~  220 (220)
T 1wpx_B          172 PKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNL-QLVASNFFYAETK  220 (220)
T ss_dssp             CTTCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTC-EEEEEEEEEECCC
T ss_pred             CCcCCccccCCcccccCCCccccchhHHHHHHHhCC-eEEEEEEEEEecC
Confidence            998764   3467788888       9999999999 7899999999996

>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2

Probab=99.87  E-value=1.5e-21  Score=150.74  Aligned_cols=117  Identities=24%  Similarity=0.404  Sum_probs=88.6

Q ss_pred             CeecCCCcccCcccccC---------CCeEEEecCC-CCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCcc-cCCC
Q 030371           33 GKDVKNGCELKPSAVIN---------QPRVEIGGDD-LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTE-ASFG  101 (178)
Q Consensus        33 ~~~V~~G~~l~~~~~~~---------~P~i~~~~~~-~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~-~~~g  101 (178)
                      +..+..|+.|++..+..         .|.|+|++.+ .+++|+|+|+|||||++     +.|+||+++|||++.. ...|
T Consensus         7 S~~~~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g   81 (166)
T 1fux_A            7 SNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTG-----SGWWHWTVVNIPATVTYLPVD   81 (166)
T ss_dssp             CSSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTT
T ss_pred             ccCcCCcCCCCHHHhccccccCCCCcCCeEEEeCCCCCCeEEEEEEECCCCCCC-----CcEEEeEEeCcCCCcccccCC
Confidence            34677899999988776         9999999874 57999999999999965     4799999999997631 1111


Q ss_pred             ------------c-------eeeeccCCCCCCC--CCcEEEEEeeeCC-ccccCCCCCCCCCCHHHHHHHhCCCCceEEE
Q 030371          102 ------------K-------EIVSYESPRPTVG--IHRFVFVLFRQHV-KQNVCAPGWRQNFSCKDFAELYNLGSPVAAV  159 (178)
Q Consensus       102 ------------~-------~~~~Y~~P~P~~G--~HRYvflL~~Q~~-~~~~~~~~~R~~Fn~~~F~~~~~L~~Pva~~  159 (178)
                                  .       ..+.|.||+||.|  .|||+|+||+|+. .+.+.     .++...++.+...-.. +|-.
T Consensus        82 ~~~~~~~~l~~g~~~g~nd~g~~~Y~GP~PP~g~g~HRY~F~lyald~~~l~l~-----~~~~~~~l~~a~~ghv-l~~a  155 (166)
T 1fux_A           82 AGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVD-----SNSSGALVGYMLNANK-IATA  155 (166)
T ss_dssp             TTCTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCC-----TTCCHHHHHHHHHTTE-EEEE
T ss_pred             ccccccccCCCCcEEeecCCCCccccCCCCcCCCCcEEEEEEEeEeccccCCCC-----CCCCHHHHHHHhhcCe-EEEE
Confidence                        1       3689999999965  8999999999997 57653     4677777766654322 4443


Q ss_pred             E
Q 030371          160 Y  160 (178)
Q Consensus       160 ~  160 (178)
                      -
T Consensus       156 ~  156 (166)
T 1fux_A          156 E  156 (166)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0

Probab=99.86  E-value=7.9e-21  Score=144.74  Aligned_cols=121  Identities=17%  Similarity=0.256  Sum_probs=89.2

Q ss_pred             cCCCcccCccc----ccCCCeEEEecCC-CCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCcc-cCCC--------
Q 030371           36 VKNGCELKPSA----VINQPRVEIGGDD-LRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTE-ASFG--------  101 (178)
Q Consensus        36 V~~G~~l~~~~----~~~~P~i~~~~~~-~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~-~~~g--------  101 (178)
                      +..|..|+..-    -...|.|+|++.+ .+++|+|+|+|||||++.++ .+.|+||+++||+++.+ ...|        
T Consensus        11 f~~g~~ip~~~t~~G~n~SP~l~w~~~P~~tks~ali~~DpDAPs~~~~-~~~~~HWvv~nIp~~~~~l~~g~~~g~~~g   89 (153)
T 3n08_A           11 FSYGRPIPKKYSCQGVGISPPLSFSDVPREAKSLVLIVEDPDVPPSVRE-DGLWIHWIVYNLSPVVSNLAEGAQIFAVQG   89 (153)
T ss_dssp             BCTTEECCGGGSTTSCCCCCCEEEECCCTTCCEEEEEEEETTSCTTTCT-TSCEEEEEEEEECTTCCEECTTCCCSSEEC
T ss_pred             cCCCCCCCHHHcCCCCCcCcEEEEcCCCCCCeEEEEEEECCCCCCccCC-CCcEEEEEEEcCCCCcccccCCCCCCceEe
Confidence            34454444432    2458899999874 47999999999999988765 46899999999998631 1111        


Q ss_pred             c---eeeeccCCCCCCCCCcEEEEEeeeCCccccCCCCCCCCCCHHHHHHHhCCCCceEEEEEEE
Q 030371          102 K---EIVSYESPRPTVGIHRFVFVLFRQHVKQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNC  163 (178)
Q Consensus       102 ~---~~~~Y~~P~P~~G~HRYvflL~~Q~~~~~~~~~~~R~~Fn~~~F~~~~~L~~Pva~~~f~~  163 (178)
                      .   ....|.||+||.|.|||+|+||+|+..+.+.     .++...++.+...-.. +|-.-...
T Consensus        90 ~n~~g~~~Y~GP~PP~g~HrY~F~vyAld~~L~l~-----~~~~~~~l~~a~~ghv-l~~a~l~g  148 (153)
T 3n08_A           90 LNTAGEIGYCPPCPPDAKHRYYFYAYALDVVLSDE-----EGVTKEQLLEAMDGHI-IATAELMG  148 (153)
T ss_dssp             BCTTSSBSCCCCCCSSSCEEEEEEEEEESSCCCCC-----SSCCHHHHHHHHTTTE-EEEEEEEE
T ss_pred             ecCCCCccccCCcCcCCCEEEEEEEEEECCcCCCC-----CCCCHHHHHHHhhhCe-EEEEEEEE
Confidence            1   3589999999999999999999999987653     4788888888776533 55444433

>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*

Probab=99.84  E-value=1.3e-20  Score=144.46  Aligned_cols=93  Identities=22%  Similarity=0.392  Sum_probs=71.9

Q ss_pred             cCCCeEEEecC-CCCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCcc-cCCCc------------------eeeec
Q 030371           48 INQPRVEIGGD-DLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTE-ASFGK------------------EIVSY  107 (178)
Q Consensus        48 ~~~P~i~~~~~-~~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~-~~~g~------------------~~~~Y  107 (178)
                      ...|.|+|++. +.+++|+|+|+|||||+.     +.|+||+++|||++.. ...|.                  ....|
T Consensus        30 n~sP~l~w~~~P~~t~s~ali~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g~~~~~~~~~~g~~~g~n~~g~~~Y  104 (159)
T 1fjj_A           30 NISPHLAWDDVPAGTKSFVVTCYDPDAPTG-----SGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGY  104 (159)
T ss_dssp             CCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTTGGGTSSCCCTTCEECBCTTSSBSC
T ss_pred             CcCCeEEEcCCCCCCeEEEEEEECCCCCCC-----CcEEEEEEEccCCCccccCCCcccccccCCCCcEEeecCCCCCcc
Confidence            45888999987 457999999999999975     3799999999997631 11111                  36899


Q ss_pred             cCCCCCCC-CCcEEEEEeeeCC-ccccCCCCCCCCCCHHHHHHHh
Q 030371          108 ESPRPTVG-IHRFVFVLFRQHV-KQNVCAPGWRQNFSCKDFAELY  150 (178)
Q Consensus       108 ~~P~P~~G-~HRYvflL~~Q~~-~~~~~~~~~R~~Fn~~~F~~~~  150 (178)
                      .||+||.| .|||+|+||+|+. .+.+.     .++...++.+..
T Consensus       105 ~GP~PP~g~~HRY~F~lyald~~~l~l~-----~~~~~~~l~~a~  144 (159)
T 1fjj_A          105 DGAAPPKGETHRYIFTVHALDIERIDVD-----EGASGAMVGFNV  144 (159)
T ss_dssp             CCBCCSTTCCEEEEEEEEEESSSCCSCC-----TTCCHHHHHHHH
T ss_pred             cCCCCcCCCceEEEEEEEEccCcccCCC-----CCCCHHHHHHHh
Confidence            99999988 8999999999997 57653     456666555443

>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori}

Probab=99.79  E-value=2.4e-19  Score=142.52  Aligned_cols=109  Identities=19%  Similarity=0.289  Sum_probs=81.2

Q ss_pred             CCCeEEEecCCCCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCcc---------------cC----CCcee-----
Q 030371           49 NQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTE---------------AS----FGKEI-----  104 (178)
Q Consensus        49 ~~P~i~~~~~~~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~---------------~~----~g~~~-----  104 (178)
                      ..|.|+|++.+.+++|+|+|+|||||++.   .++|+||+++||+.+.-               .+    .|...     
T Consensus        59 ~Sp~L~W~~~~gtks~aLvm~DPDAP~~~---g~~~~HWvv~NI~~~~l~eg~~~~~~g~~qG~N~~~~~~g~~~~~~~~  135 (207)
T 2evv_A           59 YSPKISWQKVEGAQSYALELIDHDAQKVC---GMPFVHWVVGNIAHNVLEENASMMDKRIVQGVNSLTQGFIRSPLNESE  135 (207)
T ss_dssp             CCCCEEECCCTTCSEEEEEEEETTHHHHH---SSCEEEEEEEEECSSEECTTHHHHCSSSEECCCTTCSCSTTCSSCHHH
T ss_pred             ccceEEEecCCCCeEEEEEEECCCCCCCC---CCcEEEEEEeCCCCCccccCcccCCCCceecccccccccccccccccc
Confidence            34679998776689999999999999753   35899999999954310               01    23222     


Q ss_pred             --------eeccCCCCCCCCCcEEEEEeeeCC-ccccCCCCCCCCCCHHHHHHHhCCCCceEEEEEEEeeC
Q 030371          105 --------VSYESPRPTVGIHRFVFVLFRQHV-KQNVCAPGWRQNFSCKDFAELYNLGSPVAAVYFNCQRE  166 (178)
Q Consensus       105 --------~~Y~~P~P~~G~HRYvflL~~Q~~-~~~~~~~~~R~~Fn~~~F~~~~~L~~Pva~~~f~~~~d  166 (178)
                              ..|.||+||.|.|||+|+||+|+. .+.+.     .+|...++.+...-.. +|-.-+...+.
T Consensus       136 k~~~~~~~~~Y~GP~PP~G~HRYvF~vyALd~~~L~l~-----~~~~~~~l~~am~gHv-La~a~l~g~y~  200 (207)
T 2evv_A          136 KQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALK-----APFFLGDLHDKMRNHI-IAIGRKEFLYK  200 (207)
T ss_dssp             HHHHHHHTCSCCCCCCSSSCEEEEEEEEEESSSCCCCC-----SSCCHHHHHHHHTTCE-EEEEEEEEEEC
T ss_pred             cccccccccccCCCCCCCCcEEEEEEEEEecCccCCCC-----CCCCHHHHHHHhhcCe-EEEEEEEEEEe
Confidence                    889999999999999999999997 67653     5788888888776433 66555554443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	178
d1qoua_	164	b.17.1.1 (A:) Centroradialis protein Cen {Garden s	1e-63
d1a44a_	185	b.17.1.1 (A:) Phosphatidylethanolamine binding pro	6e-51
d1wpxb1	219	b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor	3e-44
d1fjja_	159	b.17.1.2 (A:) Hypothetical protein YbhB {Escherich	3e-05
d1fuxa_	165	b.17.1.2 (A:) Hypothetical protein YbcL {Escherich	4e-04

>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} Length = 164

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Centroradialis protein Cen
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

 Score =  191 bits (486), Expect = 1e-63
 Identities = 93/164 (56%), Positives = 118/164 (71%), Gaps = 7/164 (4%)

Query: 11  GRVVGDVLDNFTRTIPLMVTYSG----KDVKNGCELKPSAVINQPRVEIGGDDLRTFYTL 66
           GRV+GDV+D+FT T+ + V Y+     K V NG EL PSAV + PRVE+ G D+R+F+TL
Sbjct: 1   GRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMRSFFTL 60

Query: 67  VMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQ 126
           +M DPD P PSDP LRE+LHW+VTDIP TT++SFGKE+VSYE PRP +GIHRFVF+LF+Q
Sbjct: 61  IMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVFLLFKQ 120

Query: 127 HVKQNVCA---PGWRQNFSCKDFAELYNLGSPVAAVYFNCQRET 167
             +           R  F+ + F +   LG PVAAV+FNCQRET
Sbjct: 121 KKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRET 164

>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]} Length = 185

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  159 bits (404), Expect = 6e-51
 Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 18/175 (10%)

Query: 1   MSGDRDPLVIGRVVGDVLDNFTRTIPLMVTYSGKD-VKNGCELKPSAVINQP-RVEIGGD 58
           +S    PL +  V      +     PL V Y G +  + G  L P+ V N+P  +   G 
Sbjct: 4   LSKWSGPLSLQEV------DERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGL 57

Query: 59  DLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEASFGKEIVSYESPR--PTVGI 116
           D    YTLV+ DPDAPS  DP  RE+ H+LV ++      S G  +  Y         G+
Sbjct: 58  DPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGNN-ISSGTVLSDYVGSGPPKGTGL 116

Query: 117 HRFVFVLFRQHVKQNVCAP-------GWRQNFSCKDFAELYNLGSPVAAVYFNCQ 164
           HR+V++++ Q        P         R  F    F + Y LG+PVA   +  +
Sbjct: 117 HRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAE 171

>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 219

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Carboxypeptidase Y inhibitor
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  143 bits (362), Expect = 3e-44
 Identities = 46/212 (21%), Positives = 74/212 (34%), Gaps = 48/212 (22%)

Query: 2   SGDRDPLVIGRVVGDVLDN--FTRTIPLMVTY-SGKDVKNGCELKPSAVINQPRVEIGGD 58
               D      ++ DV+ +  F  +  L V Y S   V  G  L      ++P+ +   +
Sbjct: 9   QASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFN 68

Query: 59  DLR---------------TFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEA----- 98
                               +TLVM DPDAPS +D    E+ H +  D+    EA     
Sbjct: 69  KQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETS 128

Query: 99  ------------SFGKEIVSYESPRPTVGI--HRFVFVLFRQHVKQNVCA-------PGW 137
                            ++ Y  P P  G   HR+VF+L++Q    +          P W
Sbjct: 129 GATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNW 188

Query: 138 ---RQNFSCKDFAELYNLGSPVAAVYFNCQRE 166
                      +A+  NL   VA+ +F  + +
Sbjct: 189 GYGTPATGVGKWAKENNLQ-LVASNFFYAETK 219

>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]} Length = 159

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbhB
species: Escherichia coli [TaxId: 562]

 Score = 40.0 bits (93), Expect = 3e-05
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 25/81 (30%)

Query: 64  YTLVMVDPDAPSPSDPGLREYLHWLVTDIPETT---EASFGKEIVS-------------- 106
           + +   DPDAP+ S      + HW+V ++P  T      FG  +V+              
Sbjct: 47  FVVTCYDPDAPTGSG-----WWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGK 101

Query: 107 --YESPRPTVG-IHRFVFVLF 124
             Y+   P  G  HR++F + 
Sbjct: 102 TGYDGAAPPKGETHRYIFTVH 122

>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]} Length = 165

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbcL
species: Escherichia coli [TaxId: 562]

 Score = 37.0 bits (85), Expect = 4e-04
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 15/72 (20%)

Query: 35 DVKNGCELKPSAVINQ---------PRVEIGGDDLRT-FYTLVMVDPDAPSPSDPGLREY 84
          ++K G +L  S V +          P +   G    T  + + + DPDAP+ S      +
Sbjct: 8  EIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSG-----W 62

Query: 85 LHWLVTDIPETT 96
           HW V +IP T 
Sbjct: 63 WHWTVVNIPATV 74

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	178
d1qoua_	164	Centroradialis protein Cen {Garden snapdragon (Ant	100.0
d1wpxb1	219	Carboxypeptidase Y inhibitor {Baker's yeast (Sacch	100.0
d1a44a_	185	Phosphatidylethanolamine binding protein, PEBP {Co	100.0
d1fjja_	159	Hypothetical protein YbhB {Escherichia coli [TaxId	99.69
d1fuxa_	165	Hypothetical protein YbcL {Escherichia coli [TaxId	99.67

>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Centroradialis protein Cen
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

Probab=100.00  E-value=5.7e-51  Score=313.38  Aligned_cols=157  Identities=59%  Similarity=1.034  Sum_probs=143.1

Q ss_pred             CCcccccCCCCCCCeeEEEEECC----eecCCCcccCcccccCCCeEEEecCCCCceEEEEEECCCCCCCCCCCCcceEE
Q 030371           11 GRVVGDVLDNFTRTIPLMVTYSG----KDVKNGCELKPSAVINQPRVEIGGDDLRTFYTLVMVDPDAPSPSDPGLREYLH   86 (178)
Q Consensus        11 ~~Iipdvl~~f~P~~~L~V~f~~----~~V~~G~~l~~~~~~~~P~i~~~~~~~~~~ytlvmiDpDap~~~~~~~~~~lH   86 (178)
                      ++||||||+.|.|++.|+|.|++    ..|.+|+.|++++++.+|+|+|...+.+++|||+|+|||+|++.++++++|||
T Consensus         1 ~~vipdvld~F~P~~~l~V~y~~~~~~~~V~~G~~l~~~~t~~~P~v~~~~~~~~~~YtlvMvDpDap~~~~~~~~~~lH   80 (164)
T d1qoua_           1 GRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMRSFFTLIMTDPDVPGPSDPYLREHLH   80 (164)
T ss_dssp             CTTCTTTSCCCCCCSCEEEEECC---CEECCTTCBCCGGGSSSCCEEEECCCCTTCEEEEEEEECSCSCSSSCTTCCEEE
T ss_pred             CcCCCcccCCCCCCcEEEEEECCCccceEecCCCEeCHHHhccCCEEEEecCCCCceEEEEEECCCCCCCCCCccceEEE
Confidence            48999999999999999999985    36899999999999999999999877789999999999999999999999999


Q ss_pred             EEEEccCCCcccCCCceeeeccCCCCCCCCCcEEEEEeeeCCccccC---CCCCCCCCCHHHHHHHhCCCCceEEEEEEE
Q 030371           87 WLVTDIPETTEASFGKEIVSYESPRPTVGIHRFVFVLFRQHVKQNVC---APGWRQNFSCKDFAELYNLGSPVAAVYFNC  163 (178)
Q Consensus        87 wlv~ni~~~~~~~~g~~~~~Y~~P~P~~G~HRYvflL~~Q~~~~~~~---~~~~R~~Fn~~~F~~~~~L~~Pva~~~f~~  163 (178)
                      ||++||+.+.....|+.+++|.+|.|.+|+|||+||||+|+......   ....|.+||+++|++++||+.|||+|||++
T Consensus        81 Wlv~nip~~~~~~~~~~~~~Y~~P~P~tG~HRYvflLf~Q~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva~n~F~~  160 (164)
T d1qoua_          81 WIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNC  160 (164)
T ss_dssp             EEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECSSCC-------CCCSBTCCHHHHHHHTTCCSCSEEEEEEE
T ss_pred             EEEecCCCCccccCCceecccCCCCCCCceeEEEEEEEEcCCCcccccCCCccccCCcCHHHHHHHhCCCCceeEEEEEe
Confidence            99999998766677889999999999999999999999999876532   346799999999999999999999999999


Q ss_pred             eeCC
Q 030371          164 QRET  167 (178)
Q Consensus       164 ~~d~  167 (178)
                      |++.
T Consensus       161 q~~~  164 (164)
T d1qoua_         161 QRET  164 (164)
T ss_dssp             CCCC
T ss_pred             ecCC
Confidence            9974

>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Carboxypeptidase Y inhibitor
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3e-47  Score=304.77  Aligned_cols=162  Identities=27%  Similarity=0.398  Sum_probs=141.4

Q ss_pred             CCCccccCCcccccCC--CCCCCeeEEEEECC-eecCCCcccCcccccCCCeEEEecC---------------CCCceEE
Q 030371            4 DRDPLVIGRVVGDVLD--NFTRTIPLMVTYSG-KDVKNGCELKPSAVINQPRVEIGGD---------------DLRTFYT   65 (178)
Q Consensus         4 ~~~~l~~~~Iipdvl~--~f~P~~~L~V~f~~-~~V~~G~~l~~~~~~~~P~i~~~~~---------------~~~~~yt   65 (178)
                      ++++|++++||||||+  .|.|+..|+|+|++ ..|.+|+.|++++++++|+|+|...               +++++||
T Consensus        11 ~~~~~~~~~Iipdvl~~~~F~P~~~L~V~y~~~~~V~~G~~l~p~~t~~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~yt   90 (219)
T d1wpxb1          11 SIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDLFT   90 (219)
T ss_dssp             HHHHHHHTTHHHHTSCCTTCCCSEEEEEEEETTEEECSSCBCCGGGGSSCCEEEEEEETTCC------CCCCCCSSCCEE
T ss_pred             HHHHHHhcCCCCccCCCCCCCCcEEEEEEECCCcCcCCCCEeCHHHhccCCEEEEecCccccccccccccccCCCCCeEE
Confidence            3678999999999999  59999999999974 7899999999999999999999632               3468999


Q ss_pred             EEEECCCCCCCCCCCCcceEEEEEEccCCCcc-----------------cCCCceeeeccCCCCC--CCCCcEEEEEeee
Q 030371           66 LVMVDPDAPSPSDPGLREYLHWLVTDIPETTE-----------------ASFGKEIVSYESPRPT--VGIHRFVFVLFRQ  126 (178)
Q Consensus        66 lvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~-----------------~~~g~~~~~Y~~P~P~--~G~HRYvflL~~Q  126 (178)
                      |||+|||+|++.++++++|||||++||+.+..                 ...|..+++|+||+|+  +|+|||+|+||+|
T Consensus        91 lvm~DPDaP~~~~~~~~~~~HWlv~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~gP~Pp~gtg~HRYvf~l~~Q  170 (219)
T d1wpxb1          91 LVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQ  170 (219)
T ss_dssp             EEEEESSSSCSSCCTTCSEEEEEEEEEEECC---------CCEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEEEC
T ss_pred             EEEECCCCCCCCCCCcceEEEEEEecCCccccccccccCccccCcccccccCCceeecccCCCCCCCCCceEEEEEEEEc
Confidence            99999999999999999999999999986521                 2347789999999999  4699999999999


Q ss_pred             CCccccC---C-------CCCCCCCCHHHHHHHhCCCCceEEEEEEEeeC
Q 030371          127 HVKQNVC---A-------PGWRQNFSCKDFAELYNLGSPVAAVYFNCQRE  166 (178)
Q Consensus       127 ~~~~~~~---~-------~~~R~~Fn~~~F~~~~~L~~Pva~~~f~~~~d  166 (178)
                      +.+++..   .       ...|.+||+++|++++||+ |||+|||++|+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~-pVa~n~F~~q~~  219 (219)
T d1wpxb1         171 PKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQ-LVASNFFYAETK  219 (219)
T ss_dssp             CTTCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTCE-EEEEEEEEECCC
T ss_pred             cCCCCcccccccccccccccccCCCCHHHHHHHhCCE-EEEEEEEEEecC
Confidence            9887542   1       1368999999999999996 999999999974

>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.2e-46  Score=291.73  Aligned_cols=154  Identities=31%  Similarity=0.553  Sum_probs=137.6

Q ss_pred             CCCCCeeEEEEECCee-cCCCcccCcccccCCCe-EEEecCCCCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCcc
Q 030371           20 NFTRTIPLMVTYSGKD-VKNGCELKPSAVINQPR-VEIGGDDLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTE   97 (178)
Q Consensus        20 ~f~P~~~L~V~f~~~~-V~~G~~l~~~~~~~~P~-i~~~~~~~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~   97 (178)
                      ++.|+..|+|+|++.. |.+|+.|++++++++|+ +.|...+.+++|||||+|||+|+++++++++|||||++||+++ +
T Consensus        17 d~~P~~~L~V~y~~~~~v~~G~~l~p~~~~~~P~~v~~~~~~~~~~YtlvMvDPDaPs~~~~~~~e~lHWlv~Ni~~~-~   95 (185)
T d1a44a_          17 DERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGN-N   95 (185)
T ss_dssp             SCCCSEECEEEETTEEECSTTEECCTTTTSSCCSEEECTTCCTTSEEEEEEEETTSSCSSSCTTCCEEEEEEEEEETT-C
T ss_pred             ccCCCceEEEEECCceecCCCCEECHHHHhcCCceEEecCCCCCCeEEEEEECCCCCCCCCCCcceEEEEEEeCCCCC-c
Confidence            5689999999998855 58999999999999996 7777766789999999999999999999999999999999987 5


Q ss_pred             cCCCceeeeccCCCCC--CCCCcEEEEEeeeCCccccCC-------CCCCCCCCHHHHHHHhCCCCceEEEEEEEeeCCC
Q 030371           98 ASFGKEIVSYESPRPT--VGIHRFVFVLFRQHVKQNVCA-------PGWRQNFSCKDFAELYNLGSPVAAVYFNCQRETG  168 (178)
Q Consensus        98 ~~~g~~~~~Y~~P~P~--~G~HRYvflL~~Q~~~~~~~~-------~~~R~~Fn~~~F~~~~~L~~Pva~~~f~~~~d~~  168 (178)
                      ...|+.+++|++|.|+  +|+|||+|+||+|++++++..       ...|.+||+++|+++++|+.|||+|||+++||++
T Consensus        96 ~~~g~~l~~Y~~P~Pp~gtg~HRYvflLf~Q~~~~~~~~~~~~~~~~~~R~~f~~~~F~~~~~L~~Pva~nfF~~~~D~~  175 (185)
T d1a44a_          96 ISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWDDY  175 (185)
T ss_dssp             GGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCCCCBCTTCCTTCTTCCHHHHHHHTTCCSCSEEEEEEECCCTT
T ss_pred             CCCCeEeeeEecCcCCCCCCceEEEEEEEEccCCCCccccccCCCCccccCCCCHHHHHHHcCCCCCeEEEEEEEecCcH
Confidence            6779999999999998  679999999999998876532       2569999999999999999999999999999998


Q ss_pred             CCcccc
Q 030371          169 SSASRR  174 (178)
Q Consensus       169 ~~~~~~  174 (178)
                      +..-++
T Consensus       176 V~~~~~  181 (185)
T d1a44a_         176 VPKLYE  181 (185)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            765443

>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbhB
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=1.8e-16  Score=119.60  Aligned_cols=105  Identities=24%  Similarity=0.418  Sum_probs=75.1

Q ss_pred             ecCCCcccCccccc---------CCCeEEEecC-CCCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCccc------
Q 030371           35 DVKNGCELKPSAVI---------NQPRVEIGGD-DLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEA------   98 (178)
Q Consensus        35 ~V~~G~~l~~~~~~---------~~P~i~~~~~-~~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~~------   98 (178)
                      .+..|..|+..-+.         ..|.|+|++. +.++.|+|+|.|||+|...     .|+||+++||++....      
T Consensus         8 ~f~~g~~iP~~~t~~~~~~~G~n~SP~l~w~~~P~~tks~ali~~D~dap~~~-----~~~HW~~~nIp~~~~~l~~g~~   82 (159)
T d1fjja_           8 DLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGS-----GWWHWVVVNLPADTRVLPQGFG   82 (159)
T ss_dssp             SCCTTSBCCGGGBCSSTTCCCCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT-----CEEEEEEEEEETTCCEECTTGG
T ss_pred             ccCCcCCCCHHHhcCCCCCCCCccCceEEecCCCCCCeEEEEEEECCCCCCCC-----CceEEEEEccCCCccccccccc
Confidence            34566666665542         4689999987 4579999999999998753     6999999999865310      


Q ss_pred             ------CCC-------ceeeeccCCCCCCC-CCcEEEEEeeeC-CccccCCCCCCCCCCHHHHHHH
Q 030371           99 ------SFG-------KEIVSYESPRPTVG-IHRFVFVLFRQH-VKQNVCAPGWRQNFSCKDFAEL  149 (178)
Q Consensus        99 ------~~g-------~~~~~Y~~P~P~~G-~HRYvflL~~Q~-~~~~~~~~~~R~~Fn~~~F~~~  149 (178)
                            ..|       .....|.||+||.| .|||+|.||+.+ +.+.+.     .+++..++++.
T Consensus        83 ~~~~~~~~g~~~g~n~~g~~~Y~gPcPP~g~~H~Y~f~vyALd~~~l~l~-----~~~~~~~l~~a  143 (159)
T d1fjja_          83 SGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVD-----EGASGAMVGFN  143 (159)
T ss_dssp             GTSSCCCTTCEECBCTTSSBSCCCBCCSTTCCEEEEEEEEEESSSCCSCC-----TTCCHHHHHHH
T ss_pred             CccccCCCccEEecccCCCcceeCCCCcCCCcEEEEEEEEEecCccCCCC-----CCCCHHHHHHH
Confidence                  011       12356999999987 799999999998 456553     24444555444

>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbcL
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=7.3e-17  Score=122.40  Aligned_cols=106  Identities=24%  Similarity=0.371  Sum_probs=74.8

Q ss_pred             ecCCCcccCcccc---------cCCCeEEEecC-CCCceEEEEEECCCCCCCCCCCCcceEEEEEEccCCCccc------
Q 030371           35 DVKNGCELKPSAV---------INQPRVEIGGD-DLRTFYTLVMVDPDAPSPSDPGLREYLHWLVTDIPETTEA------   98 (178)
Q Consensus        35 ~V~~G~~l~~~~~---------~~~P~i~~~~~-~~~~~ytlvmiDpDap~~~~~~~~~~lHwlv~ni~~~~~~------   98 (178)
                      .+..|..|+...+         ...|.|+|++. ..++.|+|+|+|||+|...     .|+||+++||+.+...      
T Consensus         8 ~f~~g~~ip~~~~~~~~tc~G~n~SP~L~w~~~P~gtks~ali~~D~Dap~~~-----~~~HWlv~nIp~~~~~l~~~~~   82 (165)
T d1fuxa_           8 EIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS-----GWWHWTVVNIPATVTYLPVDAG   82 (165)
T ss_dssp             SCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT-----CEEEEEEEEEETTCCEECTTTT
T ss_pred             CcCCcCCCCHhHhccCCCCCCCccCccEEecCCCCCCeEEEEEEeCCCCCCCC-----cceEEEEEccCccccccccCcC
Confidence            4566777766532         24899999987 4579999999999998753     6999999999865210      


Q ss_pred             --------------CCCceeeeccCCCCCC--CCCcEEEEEeeeCCc-cccCCCCCCCCCCHHHHHHHh
Q 030371           99 --------------SFGKEIVSYESPRPTV--GIHRFVFVLFRQHVK-QNVCAPGWRQNFSCKDFAELY  150 (178)
Q Consensus        99 --------------~~g~~~~~Y~~P~P~~--G~HRYvflL~~Q~~~-~~~~~~~~R~~Fn~~~F~~~~  150 (178)
                                    ........|.||+||.  |.|||+|.||+++.. +.+.     .+++..++.+..
T Consensus        83 ~~~~~~~~~g~~~g~n~~g~~~Y~gP~PP~G~~~H~Y~f~vyAL~~~~l~l~-----~~~~~~~l~~ai  146 (165)
T d1fuxa_          83 RRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVD-----SNSSGALVGYML  146 (165)
T ss_dssp             CTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCC-----TTCCHHHHHHHH
T ss_pred             ccccccCCCCeEEecccCCCcCCCCCCCcCCCCcEEEEEEEEEcCCccCCCC-----CCCCHHHHHHHH
Confidence                          0011235799999995  599999999999754 4432     344455555443