Citrus Sinensis ID: 030450


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
ccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHccccHHHHHHHHHHHHHHHHHHcccc
ccEEEEEHcHHHccccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHccc
mdevitvgdaasfrsgqatsfldsppsssslffpnnlPLISAFLAFALAQFLKIFTTWYKekrwdskkmldsggmpsshsATVSALAVAIGlqegsgspSFAIAVVLACIVMYdasgvrlhaGRQAELLNQIvcefppdhplssvrplrellghtplqvvAGGILGCVVAFLMRNSN
mdevitvgdaasfrsgqatSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
MDEVITVGDAASFRSGQATsfldsppsssslffpnnlplisaflafalaqflkifTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
******************************LFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWD*****************VSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLM****
****************************SSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEF***********LRELLGHTPLQVVAGGILGCVVAFLMRNS*
MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKK**************VSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
*DEVITVGDAASFR**************SSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNS*
ooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooo
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooo
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiii
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooo
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MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query177 2.2.26 [Sep-21-2011]
O32107158 Uncharacterized membrane yes no 0.785 0.879 0.362 6e-20
>sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1 Back     alignment and function desciption
 Score = 97.1 bits (240), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 86/149 (57%), Gaps = 10/149 (6%)

Query: 35  NNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQE 94
            N PL+S+  A   AQ +K+   +   ++ D   +  +GGMPSSHSA V+AL+  + L+ 
Sbjct: 5   TNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVALEH 64

Query: 95  GSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVC----------EFPPDHPLSS 144
           G  S  FA++ + A I M+DA+GVR HAG QA ++N++V           +FP       
Sbjct: 65  GLDSSLFAVSAIFAVITMFDATGVRRHAGEQATVINKLVIDFNRFVNEAKDFPKAAEKEK 124

Query: 145 VRPLRELLGHTPLQVVAGGILGCVVAFLM 173
            + L+ELLGH P++V  GG+ G ++  ++
Sbjct: 125 QKKLKELLGHQPIEVFFGGLTGILLTLVL 153





Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query177
297835142174 hypothetical protein ARALYDRAFT_898610 [ 0.983 1.0 0.762 3e-75
30686309174 Acid phosphatase/vanadium-dependent halo 0.983 1.0 0.762 1e-74
388504270169 unknown [Lotus japonicus] 0.954 1.0 0.779 2e-71
356543676170 PREDICTED: uncharacterized membrane prot 0.954 0.994 0.741 2e-71
449468382167 PREDICTED: uncharacterized membrane prot 0.943 1.0 0.740 3e-71
255576905173 conserved hypothetical protein [Ricinus 0.977 1.0 0.762 6e-71
224116550168 predicted protein [Populus trichocarpa] 0.943 0.994 0.713 1e-70
357453325167 Membrane protein, putative [Medicago tru 0.937 0.994 0.752 4e-70
351724945171 uncharacterized protein LOC100306390 [Gl 0.949 0.982 0.737 8e-70
388491672167 unknown [Medicago truncatula] 0.802 0.850 0.866 1e-68
>gi|297835142|ref|XP_002885453.1| hypothetical protein ARALYDRAFT_898610 [Arabidopsis lyrata subsp. lyrata] gi|297331293|gb|EFH61712.1| hypothetical protein ARALYDRAFT_898610 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 135/177 (76%), Positives = 157/177 (88%), Gaps = 3/177 (1%)

Query: 1   MDEVITVGDAASFRSGQATSFLDSPPSSSSLFFPNNLPLISAFLAFALAQFLKIFTTWYK 60
           MDEV+T  DA S   G   +   SPPS +   FP+NLP+ SAFLAFALAQFLK+FT WYK
Sbjct: 1   MDEVMTAADAGSLGGGN-RALYGSPPSQN--LFPHNLPIFSAFLAFALAQFLKVFTNWYK 57

Query: 61  EKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRL 120
           EK+WDSK+M+ SGGMPSSHSATV+ALAVAIGL+EG+G+P+FAIAVVLAC+VMYDASGVRL
Sbjct: 58  EKKWDSKRMISSGGMPSSHSATVTALAVAIGLEEGAGAPAFAIAVVLACVVMYDASGVRL 117

Query: 121 HAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRNSN 177
           HAGRQAELLNQIVCEFPP+HPLS+VRPLRELLGHTP+QV AGGILGCVVA+LMR+++
Sbjct: 118 HAGRQAELLNQIVCEFPPEHPLSTVRPLRELLGHTPIQVAAGGILGCVVAYLMRSTS 174




Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686309|ref|NP_188798.2| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] gi|22135978|gb|AAM91571.1| unknown protein [Arabidopsis thaliana] gi|23198278|gb|AAN15666.1| unknown protein [Arabidopsis thaliana] gi|332643008|gb|AEE76529.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|388504270|gb|AFK40201.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356543676|ref|XP_003540286.1| PREDICTED: uncharacterized membrane protein yuiD-like [Glycine max] Back     alignment and taxonomy information
>gi|449468382|ref|XP_004151900.1| PREDICTED: uncharacterized membrane protein YuiD-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255576905|ref|XP_002529338.1| conserved hypothetical protein [Ricinus communis] gi|223531209|gb|EEF33055.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224116550|ref|XP_002317329.1| predicted protein [Populus trichocarpa] gi|222860394|gb|EEE97941.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357453325|ref|XP_003596939.1| Membrane protein, putative [Medicago truncatula] gi|355485987|gb|AES67190.1| Membrane protein, putative [Medicago truncatula] Back     alignment and taxonomy information
>gi|351724945|ref|NP_001238099.1| uncharacterized protein LOC100306390 [Glycine max] gi|255628385|gb|ACU14537.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388491672|gb|AFK33902.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query177
TAIR|locus:2089950174 AT3G21610 "AT3G21610" [Arabido 0.689 0.701 0.852 2.6e-57
TAIR|locus:2008575163 AT1G67600 "AT1G67600" [Arabido 0.666 0.723 0.702 1.1e-41
TAIR|locus:2076790284 AT3G61770 "AT3G61770" [Arabido 0.632 0.394 0.486 1.1e-23
UNIPROTKB|Q81YD7141 BAS3352 "Uncharacterized prote 0.593 0.744 0.5 8e-21
TIGR_CMR|BA_3613141 BA_3613 "conserved hypothetica 0.593 0.744 0.5 8e-21
UNIPROTKB|Q71X40157 LMOf2365_2359 "Putative unchar 0.593 0.668 0.443 1.5e-19
TAIR|locus:505006336213 AT3G12685 "AT3G12685" [Arabido 0.401 0.333 0.408 1.2e-16
TAIR|locus:2089950 AT3G21610 "AT3G21610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 567 (204.7 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
 Identities = 104/122 (85%), Positives = 118/122 (96%)

Query:    56 TTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDA 115
             T WYKEKRWDSK+M+ SGGMPSSHSATV+ALAVAIG +EG+G+P+FAIAVVLAC+VMYDA
Sbjct:    53 TNWYKEKRWDSKRMISSGGMPSSHSATVTALAVAIGFEEGAGAPAFAIAVVLACVVMYDA 112

Query:   116 SGVRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLGHTPLQVVAGGILGCVVAFLMRN 175
             SGVRLHAGRQAELLNQIVCEFPP+HPLS+VRPLRELLGHTP+QV AGGILGCVVA+LMR+
Sbjct:   113 SGVRLHAGRQAELLNQIVCEFPPEHPLSTVRPLRELLGHTPIQVAAGGILGCVVAYLMRS 172

Query:   176 SN 177
             S+
Sbjct:   173 SS 174


GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
TAIR|locus:2008575 AT1G67600 "AT1G67600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076790 AT3G61770 "AT3G61770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q81YD7 BAS3352 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_3613 BA_3613 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q71X40 LMOf2365_2359 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] Back     alignment and assigned GO terms
TAIR|locus:505006336 AT3G12685 "AT3G12685" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
scaffold_302580.1
annotation not avaliable (174 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query177
pfam02681141 pfam02681, DUF212, Divergent PAP2 family 5e-74
COG1963153 COG1963, COG1963, Uncharacterized protein conserve 2e-50
pfam01569123 pfam01569, PAP2, PAP2 superfamily 0.004
>gnl|CDD|145700 pfam02681, DUF212, Divergent PAP2 family Back     alignment and domain information
 Score =  218 bits (558), Expect = 5e-74
 Identities = 77/139 (55%), Positives = 102/139 (73%), Gaps = 3/139 (2%)

Query: 35  NNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQE 94
           +N  L++A LA+ LAQF+K+    +KE+RWD + + ++GGMPSSHSA V+ALA  +GLQE
Sbjct: 3   SNKVLLAALLAWFLAQFIKVIIELFKERRWDFRVLFETGGMPSSHSALVTALATGVGLQE 62

Query: 95  GSGSPSFAIAVVLACIVMYDASGVRLHAGRQAELLNQIVCEFP---PDHPLSSVRPLREL 151
           G  S  FAIA V A IVMYDA+GVR  AG+QAE+LNQ++ E      +H L S +PL+EL
Sbjct: 63  GFDSSLFAIAAVFALIVMYDAAGVRRAAGKQAEVLNQLIEELFEEVEEHELLSQKPLKEL 122

Query: 152 LGHTPLQVVAGGILGCVVA 170
           LGHTPL+V  G +LG V+A
Sbjct: 123 LGHTPLEVFVGALLGIVIA 141


This family is related to the pfam01569 family (personal obs: C Yeats). Length = 141

>gnl|CDD|224874 COG1963, COG1963, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>gnl|CDD|216577 pfam01569, PAP2, PAP2 superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 177
PF02681141 DUF212: Divergent PAP2 family; InterPro: IPR003832 100.0
COG1963153 Uncharacterized protein conserved in bacteria [Fun 100.0
cd03383109 PAP2_diacylglycerolkinase PAP2_like proteins, diac 99.69
cd03394106 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super- 99.63
cd03388151 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-pho 99.57
cd03391159 PAP2_containing_2_like PAP2, subfamily similar to 99.54
cd03382159 PAP2_dolichyldiphosphatase PAP2_like proteins, dol 99.54
cd03385144 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfa 99.53
PRK09597190 lipid A 1-phosphatase; Reviewed 99.52
cd03393125 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super- 99.49
cd03395177 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super- 99.45
cd03392182 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super- 99.45
PLN02525 352 phosphatidic acid phosphatase family protein 99.41
cd03384150 PAP2_wunen PAP2, wunen subfamily. Most likely a fa 99.4
cd03390193 PAP2_containing_1_like PAP2, subfamily similar to 99.39
cd03389186 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lip 99.39
KOG3146228 consensus Dolichyl pyrophosphate phosphatase and r 99.38
PRK11837202 undecaprenyl pyrophosphate phosphatase; Provisiona 99.34
PF01569129 PAP2: PAP2 superfamily This family includes the fo 99.33
PRK10699244 phosphatidylglycerophosphatase B; Provisional 99.32
cd03381235 PAP2_glucose_6_phosphatase PAP2_like proteins, glu 99.32
smart00014116 acidPPc Acid phosphatase homologues. 99.28
cd01610122 PAP2_like PAP2_like proteins, a super-family of hi 99.27
cd03396197 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super- 99.22
PLN02731333 Putative lipid phosphate phosphatase 99.16
PLN02250314 lipid phosphate phosphatase 99.16
COG0671232 PgpB Membrane-associated phospholipid phosphatase 99.14
PLN02715327 lipid phosphate phosphatase 99.11
cd03380209 PAP2_like_1 PAP2_like_1 proteins, a sub-family of 99.05
cd03397232 PAP2_acid_phosphatase PAP2, bacterial acid phospha 98.94
cd03398232 PAP2_haloperoxidase PAP2, haloperoxidase_like subf 98.72
KOG2822 407 consensus Sphingoid base-phosphate phosphatase [Li 98.69
cd03386186 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfa 98.5
KOG3030317 consensus Lipid phosphate phosphatase and related 98.38
KOG4268189 consensus Uncharacterized conserved protein contai 98.35
PF14378191 PAP2_3: PAP2 superfamily 97.12
PF1436074 PAP2_C: PAP2 superfamily C-terminal 90.5
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised Back     alignment and domain information
Probab=100.00  E-value=8.6e-60  Score=375.25  Aligned_cols=138  Identities=59%  Similarity=0.911  Sum_probs=132.0

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Q 030450           33 FPNNLPLISAFLAFALAQFLKIFTTWYKEKRWDSKKMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVM  112 (177)
Q Consensus        33 l~~N~~l~sal~a~~~AQ~iK~~i~~lr~~~~d~~~l~~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVm  112 (177)
                      |++|++|++++++|++||++|++++++++|+|||++++++|||||||||+|+||||++|+++|++||+|++++++|+|||
T Consensus         1 l~~N~~l~~a~~a~~~AQ~iK~~~~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IVm   80 (141)
T PF02681_consen    1 LLSNKVLIAALIAWFIAQFIKVFINYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIVM   80 (141)
T ss_pred             CcCChHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhhe
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccchhhhhhhhhHHHHHHhhcCCCCC---CCCCCCCccccCCCChhHHHHHHHHHHHHH
Q 030450          113 YDASGVRLHAGRQAELLNQIVCEFPPDH---PLSSVRPLRELLGHTPLQVVAGGILGCVVA  170 (177)
Q Consensus       113 yDA~GVRr~aG~qA~~lN~L~~~~~~~~---~~~~~~~lre~lGHtp~EVl~GallGivia  170 (177)
                      |||+||||++||||++||+|++++++.+   +..++++|||++||||.||++|+++|+++|
T Consensus        81 yDA~GVRr~aG~qA~~lN~l~~~~~~~~~~~~~~~~~~LKE~lGHtp~EV~~G~llGi~vA  141 (141)
T PF02681_consen   81 YDAMGVRRAAGKQAKVLNQLIEELEEEHQSEPPIQEKKLKELLGHTPLEVFAGALLGIVVA  141 (141)
T ss_pred             eehHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcccccCCCCHHHHHHHHHHHHhhC
Confidence            9999999999999999999999998665   344567999999999999999999999985



>COG1963 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family Back     alignment and domain information
>cd03394 PAP2_like_5 PAP2_like_5 proteins Back     alignment and domain information
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily Back     alignment and domain information
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2 Back     alignment and domain information
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily Back     alignment and domain information
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily Back     alignment and domain information
>PRK09597 lipid A 1-phosphatase; Reviewed Back     alignment and domain information
>cd03393 PAP2_like_3 PAP2_like_3 proteins Back     alignment and domain information
>cd03395 PAP2_like_4 PAP2_like_4 proteins Back     alignment and domain information
>cd03392 PAP2_like_2 PAP2_like_2 proteins Back     alignment and domain information
>PLN02525 phosphatidic acid phosphatase family protein Back     alignment and domain information
>cd03384 PAP2_wunen PAP2, wunen subfamily Back     alignment and domain information
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1 Back     alignment and domain information
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily Back     alignment and domain information
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism] Back     alignment and domain information
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional Back     alignment and domain information
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3 Back     alignment and domain information
>PRK10699 phosphatidylglycerophosphatase B; Provisional Back     alignment and domain information
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily Back     alignment and domain information
>smart00014 acidPPc Acid phosphatase homologues Back     alignment and domain information
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies Back     alignment and domain information
>cd03396 PAP2_like_6 PAP2_like_6 proteins Back     alignment and domain information
>PLN02731 Putative lipid phosphate phosphatase Back     alignment and domain information
>PLN02250 lipid phosphate phosphatase Back     alignment and domain information
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism] Back     alignment and domain information
>PLN02715 lipid phosphate phosphatase Back     alignment and domain information
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases Back     alignment and domain information
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases Back     alignment and domain information
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily Back     alignment and domain information
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism] Back     alignment and domain information
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily Back     alignment and domain information
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism] Back     alignment and domain information
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown] Back     alignment and domain information
>PF14378 PAP2_3: PAP2 superfamily Back     alignment and domain information
>PF14360 PAP2_C: PAP2 superfamily C-terminal Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query177
2ipb_A230 PHON protein, class A nonspecific acid phosphatase 99.29
1d2t_A231 Acid phosphatase; all alpha, hydrolase; 1.90A {Esc 99.26
1qi9_A556 Protein (vanadium bromoperoxidase); haloperoxidase 98.89
1up8_A598 Vanadium-dependent bromoperoxidase 1; haloperoxida 98.04
3bb0_A 609 Vanadium chloroperoxidase; protein phosphate-inter 97.83
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A Back     alignment and structure
Probab=99.29  E-value=5.1e-12  Score=104.09  Aligned_cols=92  Identities=17%  Similarity=0.112  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHhhhcccccc----cc-----ccccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccc
Q 030450           47 ALAQFLKIFTTWYKEKRWDS----KK-----MLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASG  117 (177)
Q Consensus        47 ~~AQ~iK~~i~~lr~~~~d~----~~-----l~~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~G  117 (177)
                      ++.+++|..++|.||...+.    ..     .-...+|||+|+++.+++++.+.+..+..   ....+.++..|+++   
T Consensus        97 ~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~---~~~~~~~a~~v~~S---  170 (230)
T 2ipb_A           97 YATASAKKYYMRTRPFVLFNHSTCRPEDENTLRKDGSYPSGHDAYSTLLALVLSQARPER---AQELARRGWEFGQS---  170 (230)
T ss_dssp             TTTHHHHHHHCCCCHHHHTTCCCSCGGGHHHHHTSCCSSCHHHHHHHHHHHHHHHHCGGG---HHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHhCCCCcCccCCCCeeccCcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH---
Confidence            67789999999888654221    11     12345999999999999999888765432   23346788999998   


Q ss_pred             hhhhhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhcc
Q 030450          118 VRLHAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMRN  175 (177)
Q Consensus       118 VRr~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~~  175 (177)
                                                     |.|+| |+|.||++|.++|++++..+++
T Consensus       171 -------------------------------Rv~~G~H~~sDVlaG~~lG~~~~~~~~~  198 (230)
T 2ipb_A          171 -------------------------------RVICGAHWQSDVDAGRYVGAVEFARLQT  198 (230)
T ss_dssp             -------------------------------HHHHTSSCHHHHHHHHHHHHHHHHHHTT
T ss_pred             -------------------------------HHhcCcccHHHHHHHHHHHHHHHHHHHc
Confidence                                           99999 9999999999999999987765



>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A Back     alignment and structure
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2 Back     alignment and structure
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A Back     alignment and structure
>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query177
d1d2ta_224 Bacterial acid phosphatase {Escherichia blattae [T 98.85
d1vnsa_574 Chloroperoxidase {Curvularia inaequalis [TaxId: 38 81.24
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]} Back     information, alignment and structure
class: All alpha proteins
fold: Acid phosphatase/Vanadium-dependent haloperoxidase
superfamily: Acid phosphatase/Vanadium-dependent haloperoxidase
family: Type 2 phosphatidic acid phosphatase, PAP2
domain: Bacterial acid phosphatase
species: Escherichia blattae [TaxId: 563]
Probab=98.85  E-value=1.4e-09  Score=88.66  Aligned_cols=88  Identities=17%  Similarity=0.160  Sum_probs=64.1

Q ss_pred             HHHHHHHHhhhcccc------ccc---cccccCCCCchhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhhcccchhh
Q 030450           50 QFLKIFTTWYKEKRW------DSK---KMLDSGGMPSSHSATVSALAVAIGLQEGSGSPSFAIAVVLACIVMYDASGVRL  120 (177)
Q Consensus        50 Q~iK~~i~~lr~~~~------d~~---~l~~sGGMPSSHSA~v~aLat~igl~~G~~s~~Faia~v~A~IVmyDA~GVRr  120 (177)
                      ...|..++|-||-..      .+.   ..-.+++|||+|++..+++++.+........   ...+.++..+.++      
T Consensus       106 ~~~K~~~~R~RP~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~~~a~~la~~~p~~~---~~~~~~a~~~~~S------  176 (224)
T d1d2ta_         106 RSAKDHYMRIRPFAFYGVSTCNTTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQ---NEILKRGYELGQS------  176 (224)
T ss_dssp             HHHHHHHCCCCHHHHHTCCCSCC--CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGGGH---HHHHHHHHHHHHH------
T ss_pred             HHHHHHHcCCChhhhcCcCCCCccccccCCCCCCcCchhHHHHHHHHHHHHHHhHHHH---HHHHHHHHHhhhH------
Confidence            457888887776321      111   1224679999999999999998887765332   2335677788887      


Q ss_pred             hhhhhhHHHHHHhhcCCCCCCCCCCCCccccCC-CChhHHHHHHHHHHHHHHhhc
Q 030450          121 HAGRQAELLNQIVCEFPPDHPLSSVRPLRELLG-HTPLQVVAGGILGCVVAFLMR  174 (177)
Q Consensus       121 ~aG~qA~~lN~L~~~~~~~~~~~~~~~lre~lG-Htp~EVl~GallGivia~i~~  174 (177)
                                                  |.+.| |+|.||++|.++|..+...+.
T Consensus       177 ----------------------------Rv~~g~H~~sDv~aG~~lG~ai~a~l~  203 (224)
T d1d2ta_         177 ----------------------------RVICGYHWQSDVDAARVVGSAVVATLH  203 (224)
T ss_dssp             ----------------------------HHHHTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------------------------HHHcccccHHHHHHHHHHHHHHHHHHh
Confidence                                        89999 999999999999987765443



>d1vnsa_ a.111.1.3 (A:) Chloroperoxidase {Curvularia inaequalis [TaxId: 38902]} Back     information, alignment and structure