Citrus Sinensis ID: 030703

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170---
Protein Sequence
MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR
Secondary Structure (PSIPRED)
cccccccHHcccccccccccccccEEEEEEEccccEEccccEEcccccccccEEEEccccccccEEEEEEcccccccccccccEEEEEEEEcccccccccccEEEEEEccccccccccEEEEEEEEcccccccccccccccccHHHHHHHHcccccEEEEEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEcEEEccccccccccEEEEEEEcccEEEEcccEEccccEccccEEEEcccccccEEEEEEEEcccccccccccccEEEEEEEEEEccEHHHcccEEEEccccccccccEEEEEEEEEccccEEEccccccccccHHHHHHHHcccccEEEEEEEcccccccccc
Coil and Loop (DISEMBL)
msrttdplavgrvvgdvvdtfipsvKMNVIYnsnkqvanghelMPAVIIakprvdiggedMRSAYTLimtdpdapspsdpclreHLHWMvtdipgttdasfgkeivsyetpkpvvgIHRYVFILFKqrgrqtvrppasrdhfntrqfsaenglglpVAAVYFNAQRETAARRR
Flexible Loop (DISEMBL)
msrttdplavgrvvgdvvDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSyetpkpvvGIHRYVFILFKQRGRQTVRPPASRDHFNTRQFSaenglglpVAAVYFNAQretaarrr
Low Complexity Region (SEG)
MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR
Disordered region (IsUnstruct)
*******LAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIM***********CLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQR********************AENGLGLPVAAVYFN**********
Disordered Region (DISOPRED)
****TDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRGR********RDHFNTRQFSAENGLGLPVAAVYFNAQRE******
Disordered Region (DISEMBL)
MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRG********SRDHFNTRQFSAENGLGLPVAAVYFNAQ********
Disordered Region (DISPRO)
*****DPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQR*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	173	2.2.26 [Sep-21-2011]
Q9XH44	174	CEN-like protein 1 OS=Nic	N/A	no	0.994	0.988	0.796	1e-80
Q9FIT4	177	Protein BROTHER of FT and	yes	no	1.0	0.977	0.701	2e-68
Q9XH43	175	CEN-like protein 2 OS=Nic	N/A	no	0.994	0.982	0.682	1e-67
Q9XH42	175	CEN-like protein 4 OS=Nic	N/A	no	0.994	0.982	0.676	3e-67
O82088	175	Protein SELF-PRUNING OS=S	N/A	no	0.994	0.982	0.653	1e-66
Q41261	181	Protein CENTRORADIALIS OS	N/A	no	0.982	0.939	0.676	6e-66
Q9ZNV5	175	Protein CENTRORADIALIS-li	no	no	0.982	0.971	0.672	2e-65
P93003	177	Protein TERMINAL FLOWER 1	no	no	0.988	0.966	0.653	1e-64
Q93WI9	179	Protein HEADING DATE 3A O	no	no	0.988	0.955	0.604	8e-58
Q8VWH2	178	Protein HEADING DATE 3B O	no	no	0.965	0.938	0.571	1e-53

>sp|Q9XH44|CET1_TOBAC CEN-like protein 1 OS=Nicotiana tabacum GN=CET1 PE=2 SV=1

 Score =  298 bits (763), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 137/172 (79%), Positives = 157/172 (91%)

Query: 2   SRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
           SR  +PL V RV+G+VVD+F PSVK+NVIYN +KQV NGHELMPAVI AKPRV+IGGEDM
Sbjct: 3   SRVVEPLVVARVIGEVVDSFNPSVKLNVIYNGSKQVFNGHELMPAVIAAKPRVEIGGEDM 62

Query: 62  RSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYV 121
           RSAYTLIMTDPD P PSDP LREHLHW+VTDIPG+TD+SFG+EIVSYE+PKPV+GIHRYV
Sbjct: 63  RSAYTLIMTDPDVPGPSDPYLREHLHWIVTDIPGSTDSSFGREIVSYESPKPVIGIHRYV 122

Query: 122 FILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
            +L+KQ GRQTV+P A+RDHFNTR+++AENGLG PVAAVYFNAQRETAARRR
Sbjct: 123 LLLYKQSGRQTVKPAATRDHFNTRRYTAENGLGSPVAAVYFNAQRETAARRR 174

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.
Nicotiana tabacum (taxid: 4097)

>sp|Q9FIT4|BFT_ARATH Protein BROTHER of FT and TFL 1 OS=Arabidopsis thaliana GN=BFT PE=3 SV=1

 Score =  258 bits (659), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/174 (70%), Positives = 145/174 (83%), Gaps = 1/174 (0%)

Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
           MSR  +PL VGRV+GDV++ F PSV M V +NSN  V+NGHEL P+++++KPRV+IGG+D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 61  MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
           +RS +TLIM DPDAPSPS+P +RE+LHWMVTDIPGTTDASFG+EIV YETPKPV GIHRY
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 121 VFILFKQRGRQTVR-PPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           VF LFKQRGRQ V+  P +R+ FNT  FS+  GL  PVAAVYFNAQRETA RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XH43|CET2_TOBAC CEN-like protein 2 OS=Nicotiana tabacum GN=CET2 PE=2 SV=1

 Score =  255 bits (651), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 118/173 (68%), Positives = 142/173 (82%), Gaps = 1/173 (0%)

Query: 2   SRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
           S+ +DPL +GRV+G+VVD F PSVKM+V YNS+K V NGHEL P+ + +KPRV++ G D+
Sbjct: 3   SKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDL 62

Query: 62  RSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYV 121
           RS +T+IM DPD P PSDP LREHLHW+VTDIPGTTD SFGKEIV YE P+P +GIHR+V
Sbjct: 63  RSFFTMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFV 122

Query: 122 FILFKQRGRQTV-RPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           F+LFKQ+ RQTV   P SRD FNTR+F+ EN LG PVAAV+FN QRETAARRR
Sbjct: 123 FLLFKQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRETAARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Nicotiana tabacum (taxid: 4097)

>sp|Q9XH42|CET4_TOBAC CEN-like protein 4 OS=Nicotiana tabacum GN=CET4 PE=2 SV=1

 Score =  253 bits (647), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 117/173 (67%), Positives = 141/173 (81%), Gaps = 1/173 (0%)

Query: 2   SRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
           S+ +DPL +GRV+G+VVD F PSVKM+V YNS+K V NGHEL P+ + +KPRV++ G D+
Sbjct: 3   SKMSDPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDL 62

Query: 62  RSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYV 121
           RS +TLIM DPD P PSDP LREHLHW+VTDIPGTTD SFG+EIV YE P+P +GIHR+V
Sbjct: 63  RSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREIVGYEMPRPNIGIHRFV 122

Query: 122 FILFKQRGRQT-VRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           F+LFKQ+ RQT +  P SRD FNTR+FS EN LG PVAA +FN QRETAARRR
Sbjct: 123 FLLFKQKKRQTLLSAPLSRDRFNTRKFSEENELGSPVAAAFFNCQRETAARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Nicotiana tabacum (taxid: 4097)

>sp|O82088|SELFP_SOLLC Protein SELF-PRUNING OS=Solanum lycopersicum GN=SP PE=2 SV=1

 Score =  252 bits (643), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 113/173 (65%), Positives = 141/173 (81%), Gaps = 1/173 (0%)

Query: 2   SRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
           S+  +PL +GRV+G+VVD F PSVKM+V+YN+NK V NGHE  P+ + +KPRV++ G D+
Sbjct: 3   SKMCEPLVIGRVIGEVVDYFCPSVKMSVVYNNNKHVYNGHEFFPSSVTSKPRVEVHGGDL 62

Query: 62  RSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYV 121
           RS +TLIM DPD P PSDP LREHLHW+VTDIPGTTD SFG+E+V YE P+P +GIHR+V
Sbjct: 63  RSFFTLIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGREVVGYEMPRPNIGIHRFV 122

Query: 122 FILFKQRGRQTVRP-PASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           F+LFKQ+ RQT+   P SRD F++R+FS EN LG PVAAV+FN QRETAARRR
Sbjct: 123 FLLFKQKKRQTISSAPVSRDQFSSRKFSEENELGSPVAAVFFNCQRETAARRR 175

Not known. In plants homozygous for the recessive allele of the SP gene, sympodial segments develop progressively fewer nodes until the shoot is terminated by two consecutive. inflorescences.

Solanum lycopersicum (taxid: 4081)

>sp|Q41261|CEN_ANTMA Protein CENTRORADIALIS OS=Antirrhinum majus GN=CEN PE=1 SV=1

 Score =  249 bits (636), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 119/176 (67%), Positives = 143/176 (81%), Gaps = 6/176 (3%)

Query: 4   TTDPLAVGRVVGDVVDTFIPSVKMNVIYNSN---KQVANGHELMPAVIIAKPRVDIGGED 60
           ++DPL +GRV+GDVVD F  +VKM+VIYNSN   K V NGHEL P+ + + PRV++ G D
Sbjct: 6   SSDPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGD 65

Query: 61  MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
           MRS +TLIMTDPD P PSDP LREHLHW+VTDIPGTTD+SFGKE+VSYE P+P +GIHR+
Sbjct: 66  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRF 125

Query: 121 VFILFKQ--RGRQTVRPP-ASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           VF+LFKQ  RG+  + PP   RD FNTR+F+ EN LGLPVAAV+FN QRETAARRR
Sbjct: 126 VFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARRR 181

Expression of CEN leads to a morphological switch between shoot growth and the development of flower structures (inflorescence). May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Antirrhinum majus (taxid: 4151)

>sp|Q9ZNV5|CEN_ARATH Protein CENTRORADIALIS-like OS=Arabidopsis thaliana GN=CEN PE=2 SV=1

 Score =  248 bits (632), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 115/171 (67%), Positives = 139/171 (81%), Gaps = 1/171 (0%)

Query: 4   TTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRS 63
           ++DPL VGRV+GDVVD  + +VKM V YNS+KQV NGHEL P+V+  KP+V++ G DMRS
Sbjct: 5   SSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRS 64

Query: 64  AYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFI 123
            +TL+MTDPD P PSDP LREHLHW+VTDIPGTTD SFGKEI+ YE P+P +GIHR+V++
Sbjct: 65  FFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYL 124

Query: 124 LFKQRGR-QTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           LFKQ  R   V  P+ RD FNTR+F+ EN LGLPVAAV+FN QRETAARRR
Sbjct: 125 LFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

May form complexes with phosphorylated ligands by interfering with kinases and their effectors (By similarity). Can substitute for TERMINAL FLOWER 1 (in vitro).

Arabidopsis thaliana (taxid: 3702)

>sp|P93003|TFL1_ARATH Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1 SV=1

 Score =  244 bits (624), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/173 (65%), Positives = 143/173 (82%), Gaps = 2/173 (1%)

Query: 2   SRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
           +R  +PL +GRVVGDV+D F P+ KMNV YN  KQV+NGHEL P+ + +KPRV+I G D+
Sbjct: 6   TRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNK-KQVSNGHELFPSSVSSKPRVEIHGGDL 64

Query: 62  RSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYV 121
           RS +TL+M DPD P PSDP L+EHLHW+VT+IPGTTDA+FGKE+VSYE P+P +GIHR+V
Sbjct: 65  RSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFV 124

Query: 122 FILFKQRGRQTVRPPA-SRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           F+LF+Q+ R+ + P   SRDHFNTR+F+ E  LGLPVAAV+FNAQRETAAR+R
Sbjct: 125 FVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

Controls inflorescence meristem identity and is required for maintenance of a indeterminate inflorescence. Prevents the expression of 'APETALA1' and 'LEAFY'. Also plays a role in the regulation of the time of flowering in the long-day flowering pathway. May form complexes with phosphorylated ligands by interfering with kinases and their effectors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93WI9|HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A PE=1 SV=1

 Score =  222 bits (566), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 104/172 (60%), Positives = 130/172 (75%), Gaps = 1/172 (0%)

Query: 2   SRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
            R  DPL VGRVVGDV+D F+ S  + V Y S K V+NG EL P+++  +PRV++GG DM
Sbjct: 5   GRDRDPLVVGRVVGDVLDAFVRSTNLKVTYGS-KTVSNGCELKPSMVTHQPRVEVGGNDM 63

Query: 62  RSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYV 121
           R+ YTL+M DPDAPSPSDP LRE+LHW+VTDIPGTT ASFG+E++ YE+P+P +GIHR V
Sbjct: 64  RTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLV 123

Query: 122 FILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           F+LF+Q GRQTV  P  R +FNT+ F+    LG PVAAVYFN QRE  +  R
Sbjct: 124 FVLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGR 175

Probable mobile flower-promoting signal (florigen) that moves from the leaf to the shoot apical meristem (SAM) and induces flowering. Promotes the transition from vegetative growth to flowering downstream of HD1 and EHD1 under short day (SD) conditions. Acts upstream of MADS14 and MADS15.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8VWH2|HD3B_ORYSJ Protein HEADING DATE 3B OS=Oryza sativa subsp. japonica GN=HD3B PE=2 SV=1

 Score =  208 bits (529), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 96/168 (57%), Positives = 127/168 (75%), Gaps = 1/168 (0%)

Query: 6   DPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAY 65
           DPL VGR+VGDV+D F+    ++V Y + + V+NG EL P+++  +PRV +GG DMR+ Y
Sbjct: 8   DPLVVGRIVGDVLDPFVRITNLSVSYGA-RIVSNGCELKPSMVTQQPRVVVGGNDMRTFY 66

Query: 66  TLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILF 125
           TL+M DPDAPSPS+P LRE+LHW+VTDIPGTT A+FG+E++ YE+P+P +GIHR VF+LF
Sbjct: 67  TLVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVLF 126

Query: 126 KQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           +Q GRQTV  P  R +F+TR F+    LG PVA VYFN QRE  +  R
Sbjct: 127 QQLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGR 174

Probable mobile flower-promoting signal (florigen) that moves from the leaf to the shoot apical meristem (SAM) and induces flowering. Promotes the transition from vegetative growth to flowering under long day (LD) conditions. Acts upstream of MADS14 and MADS15. May also participate in the promotion of flowering under short day (SD) conditions.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	173
351725915	172	brother of FT and TFL1 protein [Glycine	0.994	1.0	0.861	3e-84
308191641	172	terminal flower 1b [Vigna unguiculata]	0.994	1.0	0.820	3e-80
358343700	172	CEN-like protein [Medicago truncatula] g	0.994	1.0	0.832	3e-80
255539507	169	phosphatidylethanolamine-binding protein	0.971	0.994	0.845	5e-80
356530882	173	PREDICTED: CEN-like protein 1-like [Glyc	0.994	0.994	0.833	8e-80
255046069	173	terminal flowering 1-like protein 4 [Gly	0.994	0.994	0.833	1e-79
17367234	174	RecName: Full=CEN-like protein 1 gi|5453	0.994	0.988	0.796	5e-79
306485932	174	brother of FT AND TFL1-like protein BFT1	1.0	0.994	0.798	2e-78
41351515	173	flowering locus T like protein [Populus	1.0	1.0	0.872	2e-77
224134777	174	predicted protein [Populus trichocarpa]	1.0	0.994	0.862	1e-75

>gi|351725915|ref|NP_001236597.1| brother of FT and TFL1 protein [Glycine max] gi|154091338|gb|ABS57463.1| brother of FT and TFL1 protein [Glycine max] gi|255046067|gb|ACU00125.1| terminal flowering 1-like protein 3 [Glycine max] gi|255630264|gb|ACU15487.1| unknown [Glycine max]

 Score =  316 bits (809), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 149/173 (86%), Positives = 161/173 (93%), Gaps = 1/173 (0%)

Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
           MSR  +PL VGRV+G+VVD F PSVKMNV Y S KQVANGHELMP+ I+AKPRV+IGG+D
Sbjct: 1   MSRLMEPLVVGRVIGEVVDIFSPSVKMNVTY-STKQVANGHELMPSTIMAKPRVEIGGDD 59

Query: 61  MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
           MR+AYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD SFGKEIV YE+PKPV+GIHRY
Sbjct: 60  MRTAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDVSFGKEIVGYESPKPVIGIHRY 119

Query: 121 VFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           VFILFKQRGRQTVRPP+SRDHFNTR+FS ENGLGLPVAAVYFNAQRETAARRR
Sbjct: 120 VFILFKQRGRQTVRPPSSRDHFNTRRFSEENGLGLPVAAVYFNAQRETAARRR 172

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|308191641|dbj|BAJ22383.1| terminal flower 1b [Vigna unguiculata]

 Score =  302 bits (774), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 142/173 (82%), Positives = 159/173 (91%), Gaps = 1/173 (0%)

Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
           MSR  +PL+VGRV+G+VVD F PSV+MNV Y S K+VANGHELMP+ ++AKPRV+IGG+D
Sbjct: 1   MSRVMEPLSVGRVIGEVVDIFSPSVRMNVTY-STKEVANGHELMPSTVMAKPRVEIGGDD 59

Query: 61  MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
           MR+AYTLIMTDPDAPSPSDP LREHLHWMVTDIPGTTD SFGKEI+ YE+PKPV+GIHRY
Sbjct: 60  MRTAYTLIMTDPDAPSPSDPYLREHLHWMVTDIPGTTDVSFGKEIMGYESPKPVIGIHRY 119

Query: 121 VFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           VFILFKQRGRQTVR P+SRD FNTR+FS ENGLGLPVAAVYFNAQRETAARRR
Sbjct: 120 VFILFKQRGRQTVRAPSSRDRFNTRRFSEENGLGLPVAAVYFNAQRETAARRR 172

Source: Vigna unguiculata

Species: Vigna unguiculata

Genus: Vigna

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358343700|ref|XP_003635936.1| CEN-like protein [Medicago truncatula] gi|355501871|gb|AES83074.1| CEN-like protein [Medicago truncatula]

 Score =  302 bits (773), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 144/173 (83%), Positives = 157/173 (90%), Gaps = 1/173 (0%)

Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
           MSR  +PL+VGRV+G+VVD F PSV+MNV Y S KQVANGHELMP++++ KPRVDIGGED
Sbjct: 1   MSRPLEPLSVGRVIGEVVDIFNPSVRMNVTY-STKQVANGHELMPSIVMNKPRVDIGGED 59

Query: 61  MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
           MRSAYTLIMTDPDAPSPSDP LREHLHWMVTDIPGTTD SFG EIV YE PKPV+GIHRY
Sbjct: 60  MRSAYTLIMTDPDAPSPSDPHLREHLHWMVTDIPGTTDVSFGNEIVEYENPKPVIGIHRY 119

Query: 121 VFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           VFILFKQRGRQTVR P+SRD+FNTR+FS EN LGLPVAAVYFNAQRETAARRR
Sbjct: 120 VFILFKQRGRQTVRSPSSRDNFNTRRFSQENNLGLPVAAVYFNAQRETAARRR 172

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539507|ref|XP_002510818.1| phosphatidylethanolamine-binding protein, putative [Ricinus communis] gi|223549933|gb|EEF51420.1| phosphatidylethanolamine-binding protein, putative [Ricinus communis]

 Score =  301 bits (772), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 142/168 (84%), Positives = 155/168 (92%)

Query: 6   DPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAY 65
           + LAVGRVVG+VVD F PSVK+ V YN+NKQVANGHELMP+V+ +KPRV+IGGEDMR+AY
Sbjct: 2   EALAVGRVVGEVVDIFTPSVKLIVTYNANKQVANGHELMPSVLTSKPRVEIGGEDMRTAY 61

Query: 66  TLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILF 125
           TLIMTDPDAPSPSDP LREHLHWMVTDIPGTT+ SFGKEIVSYETPKPVVGIHRYVFILF
Sbjct: 62  TLIMTDPDAPSPSDPNLREHLHWMVTDIPGTTNVSFGKEIVSYETPKPVVGIHRYVFILF 121

Query: 126 KQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           KQ+GRQTV+ PASRD+FNTR FS EN LGLPVA VYFNAQRETAARRR
Sbjct: 122 KQKGRQTVKAPASRDYFNTRGFSEENKLGLPVAVVYFNAQRETAARRR 169

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530882|ref|XP_003534008.1| PREDICTED: CEN-like protein 1-like [Glycine max]

 Score =  301 bits (770), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 145/174 (83%), Positives = 158/174 (90%), Gaps = 2/174 (1%)

Query: 1   MSRTTD-PLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGE 59
           MSR  + PL VGRV+G+VVD F PSV+MNV Y S KQVANGHELMP+ I+AKPRV+IGG+
Sbjct: 1   MSRLMEQPLVVGRVIGEVVDIFSPSVRMNVTY-STKQVANGHELMPSTIMAKPRVEIGGD 59

Query: 60  DMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHR 119
           DMR+AYTLIMTDPDAPSPSDP LREHLHW VTDIPGTTD SFGKEIV YE+PKPV+GIHR
Sbjct: 60  DMRTAYTLIMTDPDAPSPSDPHLREHLHWTVTDIPGTTDVSFGKEIVGYESPKPVIGIHR 119

Query: 120 YVFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           YVFILFKQRGRQTVRPP+SRDHFNTR+FS ENGLGLPVA VYFNAQRETAARRR
Sbjct: 120 YVFILFKQRGRQTVRPPSSRDHFNTRRFSEENGLGLPVAVVYFNAQRETAARRR 173

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255046069|gb|ACU00126.1| terminal flowering 1-like protein 4 [Glycine max]

 Score =  300 bits (769), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 145/174 (83%), Positives = 158/174 (90%), Gaps = 2/174 (1%)

Query: 1   MSRTTDP-LAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGE 59
           MSR  +P L VGRV+G+VVD F PSV+MNV Y S KQVANGHELMP+ I+AKPRV+IGG+
Sbjct: 1   MSRLMEPPLVVGRVIGEVVDIFSPSVRMNVTY-STKQVANGHELMPSTIMAKPRVEIGGD 59

Query: 60  DMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHR 119
           DMR+AYTLIMTDPDAPSPSDP LREHLHW VTDIPGTTD SFGKEIV YE+PKPV+GIHR
Sbjct: 60  DMRTAYTLIMTDPDAPSPSDPHLREHLHWTVTDIPGTTDVSFGKEIVGYESPKPVIGIHR 119

Query: 120 YVFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           YVFILFKQRGRQTVRPP+SRDHFNTR+FS ENGLGLPVA VYFNAQRETAARRR
Sbjct: 120 YVFILFKQRGRQTVRPPSSRDHFNTRRFSEENGLGLPVAVVYFNAQRETAARRR 173

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17367234|sp|Q9XH44.1|CET1_TOBAC RecName: Full=CEN-like protein 1 gi|5453314|gb|AAD43528.1|AF145259_1 CEN-like protein 1 [Nicotiana tabacum]

 Score =  298 bits (763), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 137/172 (79%), Positives = 157/172 (91%)

Query: 2   SRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
           SR  +PL V RV+G+VVD+F PSVK+NVIYN +KQV NGHELMPAVI AKPRV+IGGEDM
Sbjct: 3   SRVVEPLVVARVIGEVVDSFNPSVKLNVIYNGSKQVFNGHELMPAVIAAKPRVEIGGEDM 62

Query: 62  RSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYV 121
           RSAYTLIMTDPD P PSDP LREHLHW+VTDIPG+TD+SFG+EIVSYE+PKPV+GIHRYV
Sbjct: 63  RSAYTLIMTDPDVPGPSDPYLREHLHWIVTDIPGSTDSSFGREIVSYESPKPVIGIHRYV 122

Query: 122 FILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
            +L+KQ GRQTV+P A+RDHFNTR+++AENGLG PVAAVYFNAQRETAARRR
Sbjct: 123 LLLYKQSGRQTVKPAATRDHFNTRRYTAENGLGSPVAAVYFNAQRETAARRR 174

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|306485932|gb|ADM92613.1| brother of FT AND TFL1-like protein BFT1 [Beta vulgaris] gi|306485934|gb|ADM92614.1| brother of FT AND TFL1-like protein BFT1 [Beta vulgaris]

 Score =  296 bits (758), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 139/174 (79%), Positives = 156/174 (89%), Gaps = 1/174 (0%)

Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
           M+R  +PL +GRV+G+V+D F PSV +NV YNS+KQV NGHELMPAV+++KPRV+IGGED
Sbjct: 1   MARGVEPLIIGRVIGEVIDIFNPSVTLNVTYNSSKQVCNGHELMPAVVVSKPRVEIGGED 60

Query: 61  MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
           MRSAYTLIM DPDAPSPSDP LREHLHW+VTDIPGTTD SFGKEIV YETPKPVVGIHRY
Sbjct: 61  MRSAYTLIMVDPDAPSPSDPYLREHLHWIVTDIPGTTDISFGKEIVCYETPKPVVGIHRY 120

Query: 121 VFILFKQ-RGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           +FILF Q RGRQTVR P SR+ FNTR+F+AENGLGLPVA VYFNAQRETAARRR
Sbjct: 121 IFILFNQIRGRQTVRSPTSRECFNTRRFAAENGLGLPVAVVYFNAQRETAARRR 174

Source: Beta vulgaris

Species: Beta vulgaris

Genus: Beta

Family: Amaranthaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|41351515|dbj|BAD08339.1| flowering locus T like protein [Populus nigra] gi|50199496|dbj|BAD27481.1| flowering locus T like protein [Populus nigra]

 Score =  293 bits (749), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 151/173 (87%), Positives = 158/173 (91%)

Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
           MSR  +PL VGRVVGDVVD F PSV+M V YNSNKQVANG+E MP+VI  KPRV+IGGED
Sbjct: 1   MSRAMEPLTVGRVVGDVVDIFTPSVRMTVTYNSNKQVANGYEFMPSVIAYKPRVEIGGED 60

Query: 61  MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
           MR+AYTLIMTDPDAPSPSDP LREHLHWMVTDIPGTTD SFGKEIVSYETPKPVVGIHRY
Sbjct: 61  MRTAYTLIMTDPDAPSPSDPYLREHLHWMVTDIPGTTDVSFGKEIVSYETPKPVVGIHRY 120

Query: 121 VFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           VFILFKQRGRQTVRPPASRD FNTR F+ ENGLGLPVAAVYFNAQRETAARRR
Sbjct: 121 VFILFKQRGRQTVRPPASRDCFNTRMFAGENGLGLPVAAVYFNAQRETAARRR 173

Source: Populus nigra

Species: Populus nigra

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134777|ref|XP_002321903.1| predicted protein [Populus trichocarpa] gi|222868899|gb|EEF06030.1| predicted protein [Populus trichocarpa]

 Score =  287 bits (734), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 150/174 (86%), Positives = 158/174 (90%), Gaps = 1/174 (0%)

Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
           MSR  +PL VGRVVGDVVD F PSV+M V YNSNKQVANG+E MP+VI  KPRV+IGGED
Sbjct: 1   MSRAMEPLTVGRVVGDVVDIFTPSVRMTVTYNSNKQVANGYEFMPSVIAYKPRVEIGGED 60

Query: 61  MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
           MR+AYTLIMTDPDAPSPSDP LREHLHWMVTDIPGTTD SFG+EIVSYETPKPVVGIHRY
Sbjct: 61  MRTAYTLIMTDPDAPSPSDPYLREHLHWMVTDIPGTTDVSFGREIVSYETPKPVVGIHRY 120

Query: 121 VFILFKQRGRQTVR-PPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           VFILFKQRGRQTVR PPASRD FNTR F+ ENGLGLPVAAVYFNAQRETAARRR
Sbjct: 121 VFILFKQRGRQTVRAPPASRDCFNTRMFAGENGLGLPVAAVYFNAQRETAARRR 174

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	173
UNIPROTKB|Q9XGS4	173	Fdr1 "Cen-like protein FDR1" [	1.0	1.0	0.716	1.5e-67
UNIPROTKB|Q9XGS5	173	Fdr2 "Cen-like protein FDR2" [	1.0	1.0	0.705	3.1e-67
UNIPROTKB|Q6ESF8	173	P0605D08.14 "Os02g0531600 prot	1.0	1.0	0.664	4.7e-64
TAIR|locus:2174058	177	BFT "brother of FT and TFL1" [	1.0	0.977	0.701	5.4e-63
TAIR|locus:2038643	175	ATC "centroradialis" [Arabidop	1.0	0.988	0.668	3.4e-61
TAIR|locus:2150595	177	TFL1 "TERMINAL FLOWER 1" [Arab	0.988	0.966	0.653	3.9e-60
UNIPROTKB|Q93WI9	179	HD3A "Protein HEADING DATE 3A"	0.982	0.949	0.608	1.1e-53
UNIPROTKB|Q93WM7	179	Hd3a "Hd3a protein" [Oryza sat	0.982	0.949	0.608	1.1e-53
UNIPROTKB|Q8VWH2	178	HD3B "Protein HEADING DATE 3B"	0.965	0.938	0.571	7.4e-50
TAIR|locus:2034168	175	FT "AT1G65480" [Arabidopsis th	0.965	0.954	0.589	9.5e-50

UNIPROTKB|Q9XGS4 Fdr1 "Cen-like protein FDR1" [Oryza sativa (taxid:4530)]

 Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
 Identities = 124/173 (71%), Positives = 148/173 (85%)

Query:     1 MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
             MSR+ +PL VGRV+G+V+D+F P  KM V YNSNK V NGHE  P+ +++KPRV++ G D
Sbjct:     1 MSRSVEPLVVGRVIGEVIDSFNPCTKMIVTYNSNKLVFNGHEFYPSAVVSKPRVEVQGGD 60

Query:    61 MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
             MRS +TL+MTDPD P PSDP LREHLHW+VTDIPGTTDASFG+EI+SYE+PKP +GIHR+
Sbjct:    61 MRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREIISYESPKPSIGIHRF 120

Query:   121 VFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
             VF+LFKQ+ RQ V  P+SRDHFNTRQF+ EN LGLPVAAVYFNAQRETAARRR
Sbjct:   121 VFVLFKQKRRQAVVVPSSRDHFNTRQFAEENELGLPVAAVYFNAQRETAARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

UNIPROTKB|Q9XGS5 Fdr2 "Cen-like protein FDR2" [Oryza sativa (taxid:4530)]

 Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
 Identities = 122/173 (70%), Positives = 150/173 (86%)

Query:     1 MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
             MSR+ +PL VGRV+G+V+DTF P +KM V YNSNK V NGHEL P+ +++KPRV++ G D
Sbjct:     1 MSRSVEPLVVGRVIGEVLDTFNPCMKMIVTYNSNKLVFNGHELYPSAVVSKPRVEVQGGD 60

Query:    61 MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
             +RS +TL+MTDPD P PSDP LREHLHW+VTDIPGTTDASFG+E++SYE+PKP +GIHR+
Sbjct:    61 LRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVISYESPKPNIGIHRF 120

Query:   121 VFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
             +F+LFKQ+ RQTV  P+ RDHFNTR+F+ EN LGLPVAAVYFNAQRETAARRR
Sbjct:   121 IFVLFKQKRRQTVIVPSFRDHFNTRRFAEENDLGLPVAAVYFNAQRETAARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IGI

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IGI

UNIPROTKB|Q6ESF8 P0605D08.14 "Os02g0531600 protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 115/173 (66%), Positives = 143/173 (82%)

Query:     1 MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
             MSR  +PL VG+V+G+V+D F P+VKM   Y +NKQV NGHE  P+ +  KPRV++ G D
Sbjct:     1 MSRVLEPLIVGKVIGEVLDNFNPTVKMTATYGANKQVFNGHEFFPSAVAGKPRVEVQGGD 60

Query:    61 MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
             +RS +TL+MTDPD P PSDP LREHLHW+VTDIPGTTDASFG+E+VSYE+P+P +GIHR+
Sbjct:    61 LRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDASFGREVVSYESPRPNIGIHRF 120

Query:   121 VFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
             + +LF+Q+ RQ V PP SRD F+TRQF+ +N LGLPVAAVYFNAQRETAARRR
Sbjct:   121 ILVLFRQKRRQAVSPPPSRDRFSTRQFAEDNDLGLPVAAVYFNAQRETAARRR 173

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

TAIR|locus:2174058 BFT "brother of FT and TFL1" [Arabidopsis thaliana (taxid:3702)]

 Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
 Identities = 122/174 (70%), Positives = 145/174 (83%)

Query:     1 MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
             MSR  +PL VGRV+GDV++ F PSV M V +NSN  V+NGHEL P+++++KPRV+IGG+D
Sbjct:     1 MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query:    61 MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
             +RS +TLIM DPDAPSPS+P +RE+LHWMVTDIPGTTDASFG+EIV YETPKPV GIHRY
Sbjct:    61 LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query:   121 VFILFKQRGRQTVRP-PASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
             VF LFKQRGRQ V+  P +R+ FNT  FS+  GL  PVAAVYFNAQRETA RRR
Sbjct:   121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRETAPRRR 174

GO:0005737 "cytoplasm" evidence=ISM

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009908 "flower development" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

TAIR|locus:2038643 ATC "centroradialis" [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 117/175 (66%), Positives = 142/175 (81%)

Query:     1 MSR-TTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGE 59
             M+R ++DPL VGRV+GDVVD  + +VKM V YNS+KQV NGHEL P+V+  KP+V++ G 
Sbjct:     1 MARISSDPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGG 60

Query:    60 DMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHR 119
             DMRS +TL+MTDPD P PSDP LREHLHW+VTDIPGTTD SFGKEI+ YE P+P +GIHR
Sbjct:    61 DMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHR 120

Query:   120 YVFILFKQRGR-QTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
             +V++LFKQ  R   V  P+ RD FNTR+F+ EN LGLPVAAV+FN QRETAARRR
Sbjct:   121 FVYLLFKQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRETAARRR 175

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0005634 "nucleus" evidence=IDA

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=IMP

TAIR|locus:2150595 TFL1 "TERMINAL FLOWER 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 113/173 (65%), Positives = 143/173 (82%)

Query:     2 SRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
             +R  +PL +GRVVGDV+D F P+ KMNV YN  KQV+NGHEL P+ + +KPRV+I G D+
Sbjct:     6 TRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNK-KQVSNGHELFPSSVSSKPRVEIHGGDL 64

Query:    62 RSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYV 121
             RS +TL+M DPD P PSDP L+EHLHW+VT+IPGTTDA+FGKE+VSYE P+P +GIHR+V
Sbjct:    65 RSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFV 124

Query:   122 FILFKQRGRQTVRPPA-SRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
             F+LF+Q+ R+ + P   SRDHFNTR+F+ E  LGLPVAAV+FNAQRETAAR+R
Sbjct:   125 FVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009744 "response to sucrose stimulus" evidence=IMP

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006623 "protein targeting to vacuole" evidence=IMP

GO:0031982 "vesicle" evidence=IDA

GO:0090344 "negative regulation of cell aging" evidence=IMP

GO:0003712 "transcription cofactor activity" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

UNIPROTKB|Q93WI9 HD3A "Protein HEADING DATE 3A" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/171 (60%), Positives = 130/171 (76%)

Query:     3 RTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMR 62
             R  DPL VGRVVGDV+D F+ S  + V Y S K V+NG EL P+++  +PRV++GG DMR
Sbjct:     6 RDRDPLVVGRVVGDVLDAFVRSTNLKVTYGS-KTVSNGCELKPSMVTHQPRVEVGGNDMR 64

Query:    63 SAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVF 122
             + YTL+M DPDAPSPSDP LRE+LHW+VTDIPGTT ASFG+E++ YE+P+P +GIHR VF
Sbjct:    65 TFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVF 124

Query:   123 ILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
             +LF+Q GRQTV  P  R +FNT+ F+    LG PVAAVYFN QRE  +  R
Sbjct:   125 VLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGR 175

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048572 "short-day photoperiodism" evidence=IMP

GO:0048575 "short-day photoperiodism, flowering" evidence=IMP

UNIPROTKB|Q93WM7 Hd3a "Hd3a protein" [Oryza sativa Indica Group (taxid:39946)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 104/171 (60%), Positives = 130/171 (76%)

Query:     3 RTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMR 62
             R  DPL VGRVVGDV+D F+ S  + V Y S K V+NG EL P+++  +PRV++GG DMR
Sbjct:     6 RDRDPLVVGRVVGDVLDAFVRSTNLKVTYGS-KTVSNGCELKPSMVTHQPRVEVGGNDMR 64

Query:    63 SAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVF 122
             + YTL+M DPDAPSPSDP LRE+LHW+VTDIPGTT ASFG+E++ YE+P+P +GIHR VF
Sbjct:    65 TFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVF 124

Query:   123 ILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
             +LF+Q GRQTV  P  R +FNT+ F+    LG PVAAVYFN QRE  +  R
Sbjct:   125 VLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGR 175

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048572 "short-day photoperiodism" evidence=IMP

UNIPROTKB|Q8VWH2 HD3B "Protein HEADING DATE 3B" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 96/168 (57%), Positives = 127/168 (75%)

Query:     6 DPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAY 65
             DPL VGR+VGDV+D F+    ++V Y + + V+NG EL P+++  +PRV +GG DMR+ Y
Sbjct:     8 DPLVVGRIVGDVLDPFVRITNLSVSYGA-RIVSNGCELKPSMVTQQPRVVVGGNDMRTFY 66

Query:    66 TLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILF 125
             TL+M DPDAPSPS+P LRE+LHW+VTDIPGTT A+FG+E++ YE+P+P +GIHR VF+LF
Sbjct:    67 TLVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVLF 126

Query:   126 KQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
             +Q GRQTV  P  R +F+TR F+    LG PVA VYFN QRE  +  R
Sbjct:   127 QQLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGR 174

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010229 "inflorescence development" evidence=IMP

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048573 "photoperiodism, flowering" evidence=IMP

TAIR|locus:2034168 FT "AT1G65480" [Arabidopsis thaliana (taxid:3702)]

 Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
 Identities = 99/168 (58%), Positives = 122/168 (72%)

Query:     6 DPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAY 65
             DPL V RVVGDV+D F  S+ + V Y   ++V NG +L P+ +  KPRV+IGGED+R+ Y
Sbjct:     7 DPLIVSRVVGDVLDPFNRSITLKVTYGQ-REVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query:    66 TLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILF 125
             TL+M DPD PSPS+P LRE+LHW+VTDIP TT  +FG EIV YE P P  GIHR VFILF
Sbjct:    66 TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query:   126 KQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
             +Q GRQTV  P  R +FNTR+F+    LGLPVAAV++N QRE+    R
Sbjct:   126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGR 173

GO:0009911 "positive regulation of flower development" evidence=IMP

GO:0008429 "phosphatidylethanolamine binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0048573 "photoperiodism, flowering" evidence=IEP;RCA

GO:0009909 "regulation of flower development" evidence=IGI;RCA

GO:0010119 "regulation of stomatal movement" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O82088	SELFP_SOLLC	No assigned EC number	0.6531	0.9942	0.9828	N/A	no
Q9XH42	CET4_TOBAC	No assigned EC number	0.6763	0.9942	0.9828	N/A	no
Q9XH43	CET2_TOBAC	No assigned EC number	0.6820	0.9942	0.9828	N/A	no
Q9XH44	CET1_TOBAC	No assigned EC number	0.7965	0.9942	0.9885	N/A	no
Q8VIN1	PEBP2_MOUSE	No assigned EC number	0.3146	0.9306	0.8609	yes	no
Q41261	CEN_ANTMA	No assigned EC number	0.6761	0.9826	0.9392	N/A	no
Q9FIT4	BFT_ARATH	No assigned EC number	0.7011	1.0	0.9774	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00151192 hypothetical protein (174 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	173
PLN00169	175	PLN00169, PLN00169, CETS family protein; Provision	3e-84
cd00866	154	cd00866, PEBP_euk, PhosphatidylEthanolamine-Bindin	3e-45
pfam01161	147	pfam01161, PBP, Phosphatidylethanolamine-binding p	3e-27
cd00457	159	cd00457, PEBP, PhosphatidylEthanolamine-Binding Pr	6e-16
cd00865	150	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-	2e-06
COG1881	174	COG1881, COG1881, Phospholipid-binding protein [Ge	3e-05

>gnl|CDD|177765 PLN00169, PLN00169, CETS family protein; Provisional

 Score =  245 bits (627), Expect = 3e-84
 Identities = 104/175 (59%), Positives = 132/175 (75%), Gaps = 3/175 (1%)

Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED 60
             R  DPL VGRVVGDV+D F  S+ + V Y  +++V NG EL P+ ++ +PRVDIGGED
Sbjct: 2   SPRDRDPLVVGRVVGDVLDPFTRSISLRVTYG-SREVNNGCELKPSQVVNQPRVDIGGED 60

Query: 61  MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
           +R+ YTL+M DPDAPSPS+P LRE+LHW+VTDIP TT A+FG+E+V YE+P+P  GIHR+
Sbjct: 61  LRTFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPATTGATFGQEVVCYESPRPTAGIHRF 120

Query: 121 VFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAA--RRR 173
           VF+LF+Q GRQTV  P  R +FNTR F+    LG PVAAVYFN QRE+ +  RR 
Sbjct: 121 VFVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGSPVAAVYFNCQRESGSGGRRP 175

Length = 175

>gnl|CDD|176644 cd00866, PEBP_euk, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes

 Score =  145 bits (368), Expect = 3e-45
 Identities = 64/154 (41%), Positives = 80/154 (51%), Gaps = 14/154 (9%)

Query: 25  VKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSA-YTLIMTDPDAPSPSDPCLR 83
           V + V Y S+  V  G+ L P+     P V    ED     YTL+M DPDAPS  DP  R
Sbjct: 1   VDLTVSYGSSGVVTPGNLLTPSETQKAPTVSFSSEDPPDKLYTLVMVDPDAPSRDDPKFR 60

Query: 84  EHLHWMVTDIPGTTD----ASFGKEIVSYE--TPKPVVGIHRYVFILFKQRGRQTV---- 133
           E LHW+VT+IPG+       S G+ +V Y    P    G HRYVF+LFKQ G        
Sbjct: 61  EWLHWLVTNIPGSDTTTGLVSKGEVLVPYLGPGPPKGTGPHRYVFLLFKQPGGLDFPESK 120

Query: 134 ---RPPASRDHFNTRQFSAENGLGLPVAAVYFNA 164
                   R  F+ R+F+ +NGLGLPVAA +F  
Sbjct: 121 LPPTSGLGRRGFDVREFAKKNGLGLPVAANFFQV 154

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). Length = 154

>gnl|CDD|216338 pfam01161, PBP, Phosphatidylethanolamine-binding protein

 Score = 99.9 bits (249), Expect = 3e-27
 Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 19/153 (12%)

Query: 24  SVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLR 83
              + V Y     V  G+ L P +  +       G     +Y L+M DPDAPS SDP   
Sbjct: 1   GGPLPVEYT-GAFVCPGNNLSPPLSWSDAPTISDGT---KSYALVMVDPDAPSRSDPKGS 56

Query: 84  EHLHWMVTDIPGTTDA----------SFGKEIVSYE--TPKPVVGIHRYVFILFKQRGRQ 131
           E LHW+VT+IP +              FG+ +  Y    P P  G HRYVF+L+    + 
Sbjct: 57  EFLHWLVTNIPASVTELPGGGVQGVNDFGQTLAGYIGPCPPPGTGPHRYVFLLYALDEKL 116

Query: 132 TVRPPASRDHFNTRQFSAENGLGLP-VAAVYFN 163
            +    +R     R+    + LG   +A  +F 
Sbjct: 117 DLPAGVTRAEL--REAFKGHVLGPATLAGNFFR 147

Length = 147

>gnl|CDD|176642 cd00457, PEBP, PhosphatidylEthanolamine-Binding Protein (PEBP) domain

 Score = 70.5 bits (173), Expect = 6e-16
 Identities = 31/140 (22%), Positives = 44/140 (31%), Gaps = 32/140 (22%)

Query: 51  KPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTT------------ 97
            P +   G       Y L+M DPDA     P  R  +H +V  IP               
Sbjct: 26  FPSLSWDGPPPDVKEYVLVMEDPDA-----PLGRPIVHGLVYGIPANKTSLSNDDFVVTD 80

Query: 98  DASFGKEIV----------SYETPKPVV--GIHRYVFILFKQRGR-QTVRPPASRDHFNT 144
           +   G +             Y  P+P +  G HRY F ++         +    R  F  
Sbjct: 81  NGKGGLQGGFKYGKNRGGTVYIGPRPPLGHGPHRYFFQVYALDEPLDRSKLGDGRTKFEV 140

Query: 145 RQFSAENGLGLPVAAVYFNA 164
            +F+  N LG  V       
Sbjct: 141 ARFAEGNVLG-AVGEWVGQF 159

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). A number of biological roles for members of the PEBP family include serine protease inhibition, membrane biogenesis, regulation of flowering plant stem architecture, and Raf-1 kinase inhibition. Although their overall structures are similar, the members of the PEBP family bind very different substrates including phospholipids, opioids, and hydrophobic odorant molecules as well as having different oligomerization states (monomer/dimer/tetramer). Length = 159

>gnl|CDD|176643 cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 27/81 (33%)

Query: 65  YTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDA-------------------SFGKEI 105
             LI+ DPDAP+          HW+V +IP  T                      FG+  
Sbjct: 42  LALIVEDPDAPTGGGFV-----HWVVWNIPADTTELPEGASRGALPAGAVQGRNDFGE-- 94

Query: 106 VSYETPKP-VVGIHRYVFILF 125
             Y  P P   G HRYVF ++
Sbjct: 95  AGYGGPCPPDGGPHRYVFTVY 115

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members. Length = 150

>gnl|CDD|224793 COG1881, COG1881, Phospholipid-binding protein [General function prediction only]

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 26/82 (31%)

Query: 65  YTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDA------------------SFGKEIV 106
           + L + DPDAP+          HW+V +IP                        FG    
Sbjct: 63  FALTVDDPDAPTGGGWV-----HWVVANIPADVTELPEGSGPKSKIGIVQGINDFGS--R 115

Query: 107 SYETPKPVVG-IHRYVFILFKQ 127
            Y  P P  G  HRY F ++  
Sbjct: 116 GYGGPCPPKGHGHRYYFTVYAL 137

Length = 174

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	173
PLN00169	175	CETS family protein; Provisional	100.0
KOG3346	185	consensus Phosphatidylethanolamine binding protein	100.0
cd00866	154	PEBP_euk PhosphatidylEthanolamine-Binding Protein	100.0
PF01161	146	PBP: Phosphatidylethanolamine-binding protein; Int	99.96
cd00457	159	PEBP PhosphatidylEthanolamine-Binding Protein (PEB	99.92
cd00865	150	PEBP_bact_arch PhosphatidylEthanolamine-Binding Pr	99.76
PRK10257	158	putative kinase inhibitor protein; Provisional	99.74
PRK09818	183	putative kinase inhibitor; Provisional	99.72
TIGR00481	141	Raf kinase inhibitor-like protein, YbhB/YbcL famil	99.72
COG1881	174	Phospholipid-binding protein [General function pre	99.69

>PLN00169 CETS family protein; Provisional

Probab=100.00  E-value=4.4e-54  Score=330.27  Aligned_cols=172  Identities=60%  Similarity=1.054  Sum_probs=161.2

Q ss_pred             CCCCCCceeeeeeccccccccccceEEEEEEcCcccccccceeccceeccCCeeeeCCCCcceeEEEEEeCCCCCCCCCc
Q 030703            1 MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDP   80 (173)
Q Consensus         1 ~~~~~~~l~~~~iipdvl~~f~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~~~~~~~ytlvmvDpD~p~~~~~   80 (173)
                      |.+++++|.+++|||||++.|.|+..|+|.|++ ..|.+|+.|++++++.+|+|+|.+.+.+++|||+|+|||+|+++++
T Consensus         2 ~~~~~~~l~~~~iipdvid~f~P~~~L~V~y~s-~~V~~G~~l~p~~t~~~P~i~~~~~~~~~~ytlim~DpDaP~~~~~   80 (175)
T PLN00169          2 SPRDRDPLVVGRVVGDVLDPFTRSISLRVTYGS-REVNNGCELKPSQVVNQPRVDIGGEDLRTFYTLVMVDPDAPSPSNP   80 (175)
T ss_pred             CcccccchhhCCcCCcccCCcCCceEEEEEECC-cCcCCcCCCCHHHhccCCEEEEccCCCCceeEEEEECCCCCCCCCC
Confidence            788999999999999999999999999999987 8999999999999999999999877668999999999999999999


Q ss_pred             chhceeeeEeecCCCCCCCCccceeeeeeCCCCcceeeeEEEEEEeecCccccCCCCCCCCCcchhhhhhhCCCCceeEE
Q 030703           81 CLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAV  160 (173)
Q Consensus        81 ~~~~~lHwl~~ni~~~~~~~~g~~~~~Y~~P~P~~G~HRYvflly~q~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~~  160 (173)
                      ++++||||+++||+++.....|+.+++|+||.|++|.|||+|+||+|+..+...++..|.+||+++|++++||+.|||||
T Consensus        81 ~~~~~~HW~v~nip~~~~~~~g~~~~~Y~~P~Pp~G~HRYvflly~Q~~~~~~~~~~~R~~F~~~~Fa~~~~L~~PvA~n  160 (175)
T PLN00169         81 NLREYLHWLVTDIPATTGATFGQEVVCYESPRPTAGIHRFVFVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGSPVAAV  160 (175)
T ss_pred             CcccEEEEEEeCCccccccccCccceeecCCCCCCCceeEEEEEEEcCCCcccCCcccCCCcCHHHHHHHhCCCCceEEE
Confidence            99999999999999875556788999999999999999999999999988765556789999999999999999999999


Q ss_pred             EeccccchhhccC
Q 030703          161 YFNAQRETAARRR  173 (173)
Q Consensus       161 ~f~~~~~~~~~~~  173 (173)
                      ||++||++..++|
T Consensus       161 fF~a~~~~~~~~~  173 (175)
T PLN00169        161 YFNCQRESGSGGR  173 (175)
T ss_pred             EEEEecCCcCCcc
Confidence            9999999988776

>KOG3346 consensus Phosphatidylethanolamine binding protein [General function prediction only]

Probab=100.00  E-value=4.8e-53  Score=324.48  Aligned_cols=173  Identities=51%  Similarity=0.828  Sum_probs=162.9

Q ss_pred             CCCCCCceeeeeeccccccccccceEEEEEEcCcccccccceeccceeccCCeeeeCCC-CcceeEEEEEeCCCCCCCCC
Q 030703            1 MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGE-DMRSAYTLIMTDPDAPSPSD   79 (173)
Q Consensus         1 ~~~~~~~l~~~~iipdvl~~f~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~~-~~~~~ytlvmvDpD~p~~~~   79 (173)
                      |..+++.+.+++|++|++..+.|++.|+|+|+++..|++|+.|++++++..|.|+|.+. +.++.|||||+|||+|++++
T Consensus         1 ~~~~~~~~~~~~iv~Dvl~~~~p~~~l~V~y~~~~~v~~G~~l~pt~~~~~P~v~~~~~a~~~~~yTLvm~DPDaPsr~~   80 (185)
T KOG3346|consen    1 MSDIRDPLNKHRIVPDVLDDFEPSVKLNVTYNSDIVVENGNELTPTQVKNRPIVSWDGFADPGSLYTLVMTDPDAPSRSD   80 (185)
T ss_pred             CcchhhhhhccCcchhhhccCCCceEEEEEeCCCeeecCCCEeCchhhccCCeEEEcCcCCCCCeEEEEEeCCCCCCCCC
Confidence            67889999999999999999999999999999989999999999999999999999984 77999999999999999999


Q ss_pred             cchhceeeeEeecCCCCCCCCccceeeeeeCCCCc--ceeeeEEEEEEeecCccccC--CCCCCCCCcchhhhhhhCCCC
Q 030703           80 PCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPV--VGIHRYVFILFKQRGRQTVR--PPASRDHFNTRQFSAENGLGL  155 (173)
Q Consensus        80 ~~~~~~lHwl~~ni~~~~~~~~g~~~~~Y~~P~P~--~G~HRYvflly~q~~~~~~~--~~~~R~~F~~~~F~~~~~L~~  155 (173)
                      |++++|||||++|||++.+.+.|++++.|+||.|+  +|.|||+|+||+|+.+....  .+..|.+||+++|+++++|++
T Consensus        81 p~~rE~lHWlV~nIPg~~~~~~G~~i~~Y~~P~Pp~~tG~HRyVfll~rQ~~~~~~~~~~~~~R~~F~~~~F~~~~~lg~  160 (185)
T KOG3346|consen   81 PKFREWLHWLVTNIPGTDGISKGQEISEYLGPGPPKGTGLHRYVFLLYRQPGRLDSDEPSPLSRGNFNTRKFAKKYELGT  160 (185)
T ss_pred             CcceeEEEEEEEeecCCccccCCeEeeeeeCCCCCCCCCceEEEEEEEEcCCccccccCCCCcccceeHHHHHHHhccCC
Confidence            99999999999999999778999999999999994  99999999999999988763  257899999999999999999


Q ss_pred             ceeEEEeccccchhhccC
Q 030703          156 PVAAVYFNAQRETAARRR  173 (173)
Q Consensus       156 pva~~~f~~~~~~~~~~~  173 (173)
                      ||||+||++|||+..++|
T Consensus       161 PvA~~~f~aq~d~~~~~~  178 (185)
T KOG3346|consen  161 PVAGNFFQAQWDDYVPKL  178 (185)
T ss_pred             chhhheehhhcchhhHHH
Confidence            999999999999987754

>cd00866 PEBP_euk PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in eukaryotes

Probab=100.00  E-value=4.2e-39  Score=242.90  Aligned_cols=139  Identities=46%  Similarity=0.787  Sum_probs=125.8

Q ss_pred             EEEEEEcCcccccccceeccceeccCCeeeeCCCC-cceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCC----CC
Q 030703           26 KMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD----AS  100 (173)
Q Consensus        26 ~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~----~~  100 (173)
                      .|.|.|++...|.+|+.|++++++.+|+|+|.... .+++|+|+|+|||+|.+.++.++++||||++||+.+..    ..
T Consensus         2 ~l~v~y~~~~~v~~G~~l~~~~~~~~P~i~~~~~~~~~~~y~lvm~DpD~p~~~~~~~~~~lHwl~~ni~~~~~~~~~~~   81 (154)
T cd00866           2 DLTVSYGSSGVVTPGNLLTPSETQKAPTVSFSSEDPPDKLYTLVMVDPDAPSRDDPKFREWLHWLVTNIPGSDTTTGLVS   81 (154)
T ss_pred             eEEEEECCCcCcCCCCCCCHHHhCcCCeEEEecCCCCCCeEEEEEECCCCCCCCCCCCCCEEEEEEeCcCCccccccccC
Confidence            68999998788999999999999999999999765 68999999999999999999999999999999998753    34


Q ss_pred             ccceeeeeeCCCC--cceeeeEEEEEEeecCccccCC-------CCCCCCCcchhhhhhhCCCCceeEEEecc
Q 030703          101 FGKEIVSYETPKP--VVGIHRYVFILFKQRGRQTVRP-------PASRDHFNTRQFSAENGLGLPVAAVYFNA  164 (173)
Q Consensus       101 ~g~~~~~Y~~P~P--~~G~HRYvflly~q~~~~~~~~-------~~~R~~F~~~~F~~~~~L~~pva~~~f~~  164 (173)
                      .|..+++|+||+|  ++|+|||+|+||+|+..+.+..       ...|.+||+++|++++||+.|||+|||++
T Consensus        82 ~~~~~~~Y~~P~Pp~g~g~HRY~fll~~q~~~~~~~~~~~~~~~~~~r~~F~~~~F~~~~~L~~pva~~~f~~  154 (154)
T cd00866          82 KGEVLVPYLGPGPPKGTGPHRYVFLLFKQPGGLDFPESKLPPTSGLGRRGFDVREFAKKNGLGLPVAANFFQV  154 (154)
T ss_pred             CCCCcceeeCCCCCCCCCCccEEEEEEEeCCccCccccccccCCccccCCcCHHHHHHHhCCCCcEEEEEEeC
Confidence            6789999999999  4689999999999999877643       46899999999999999999999999985

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in eukaryotes. Members here include those in plants such as Arabidopsis thaliana FLOWERING LOCUS (FT) and TERMINAL FLOWER1 (FT1) which function as a promoter and a repressor of the floral transitions, respectively as well as the mammalian Raf kinase inhibitory protein (RKIP) which inhibits MAP kinase (Raf-MEK-ERK), G protein-coupled receptor (GPCR) kinase and NFkappaB signaling cascades. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer).

>PF01161 PBP: Phosphatidylethanolamine-binding protein; InterPro: IPR008914 The PEBP (PhosphatidylEthanolamine-Binding Protein) family is a highly conserved group of proteins that have been identified in numerous tissues in a wide variety of organisms, including bacteria, yeast, nematodes, plants, drosophila and mammals

Probab=99.96  E-value=7e-30  Score=190.90  Aligned_cols=130  Identities=38%  Similarity=0.680  Sum_probs=104.4

Q ss_pred             eEEEEEEcCcccccccceeccce-eccCCeeeeCCCCcceeEEEEEeCCCCCCCCCcchhceeeeEeecCC---------
Q 030703           25 VKMNVIYNSNKQVANGHELMPAV-IIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIP---------   94 (173)
Q Consensus        25 ~~L~V~y~~~~~v~~G~~l~~~~-t~~~P~v~~~~~~~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~---------   94 (173)
                      ..|.|+|.++..+..|+.+++.. +...|+       .+++|+|+|+|+|+|.+.+++.+++||||++||+         
T Consensus         2 ~~L~v~f~~~~~~~~G~~~sp~~~~~~~P~-------~~~~y~lim~D~D~P~~~~~~~~~~~Hwl~~ni~~~~~~~~~~   74 (146)
T PF01161_consen    2 GKLPVKFTGNKSVCPGNNVSPPLSWQNAPT-------GTKSYTLIMVDPDAPSRENPSFGPFLHWLVTNIPSTELPEGSD   74 (146)
T ss_dssp             CEEEEEECTTEECSTTEEEEGGGECSS-TC-------TTSEEEEEEEETTSSBTTSCTTTSEEEEEEEEEETSEE-TTSS
T ss_pred             cCcCceeEcccccCCCCCCCcCcccccCCC-------CCcEEEEEEECCCCCccccCCCCcEEEEEEcCCCCccCCCCCC
Confidence            57999995448999999999988 778887       4789999999999999888889999999999999         


Q ss_pred             CC-CCC-CccceeeeeeCCCCc--ceeeeEEEEEEeecCccccCCCCCCCCCcchhhhhhhCCCCc-eeEEEec
Q 030703           95 GT-TDA-SFGKEIVSYETPKPV--VGIHRYVFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLP-VAAVYFN  163 (173)
Q Consensus        95 ~~-~~~-~~g~~~~~Y~~P~P~--~G~HRYvflly~q~~~~~~~~~~~R~~F~~~~F~~~~~L~~p-va~~~f~  163 (173)
                      .. ... +.|+.+++|.||+|+  +|.|||+|+||+|+..+.+  ......+++++..++++|+.+ +|++||+
T Consensus        75 ~~~~~~~~~g~~~~~Y~~P~Pp~g~g~HrY~f~ly~q~~~~~l--~~~~~~~~~~~~~~~~~L~~~~l~~~y~r  146 (146)
T PF01161_consen   75 GARQGINSSGQVIAPYLGPCPPKGSGPHRYVFLLYAQPSPLPL--SDGATKFDLREAFKGHGLGPASLAGNYFR  146 (146)
T ss_dssp             TCETSBGGTSEEEES--SB-SSTTSSCEEEEEEEEEESSSSTS--GBSSTHHTHHHHHHHTTEESEESEEEEEE
T ss_pred             ccEecccccCccccEEcCCcCcCcCCCceEEEEEEEcCCCCCC--CCCCCHHHHHHHHHcCCCCCceEEEEEEC
Confidence            10 011 226678999999995  6799999999999996655  234455788888899999987 8999996

The various functions described for members of this family include lipid binding, neuronal development [], serine protease inhibition [], the control of the morphological switch between shoot growth and flower structures [], and the regulation of several signalling pathways such as the MAP kinase pathway [], and the NF-kappaB pathway []. The control of the latter two pathways involves the PEBP protein RKIP, which interacts with MEK and Raf-1 to inhibit the MAP kinase pathway, and with TAK1, NIK, IKKalpha and IKKbeta to inhibit the NF-kappaB pathway. Other PEBP-like proteins that show strong structural homology to PEBP include Escherichia coli YBHB and YBCL, the Rattus norvegicus (Rat) neuropeptide HCNP, and Antirrhinum majus (Garden snapdragon) protein centroradialis (CEN). Structures have been determined for several members of the PEBP-like family, all of which show extensive fold conservation. The structure consists of a large central beta-sheet flanked by a smaller beta-sheet on one side, and an alpha helix on the other. Sequence alignments show two conserved central regions, CR1 and CR2, that form a consensus signature for the PEBP family. These two regions form part of the ligand-binding site, which can accommodate various anionic groups. The N- and C-terminal regions are the least conserved, and may be involved in interactions with different protein partners. The N-terminal residues 2-12 form the natural cleavage peptide HCNP involved in neuronal development. The C-terminal region is deleted in plant and bacterial PEBP homologues, and may help control accessibility to the active site. ; PDB: 1BD9_A 1BEH_A 2QYQ_A 2L7W_A 3AXY_A 2IQX_C 2IQY_A 1KN3_A 1FUX_A 1B7A_A ....

>cd00457 PEBP PhosphatidylEthanolamine-Binding Protein (PEBP) domain

Probab=99.92  E-value=2.7e-25  Score=168.82  Aligned_cols=122  Identities=29%  Similarity=0.419  Sum_probs=97.4

Q ss_pred             cccc-cceecc----ceeccCCeeeeCCCC-cceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCCC----------
Q 030703           36 QVAN-GHELMP----AVIIAKPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDA----------   99 (173)
Q Consensus        36 ~v~~-G~~l~~----~~t~~~P~v~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~~----------   99 (173)
                      .+.. |+.|+.    ......|.|+|++.+ .+++|+|+|+|||+|..     ++|+||+++||+.+...          
T Consensus         6 ~~~~~g~~lp~~~~~~g~~~sP~l~w~~~p~~t~s~ali~~DpDap~~-----~~~~HWvv~nIp~~~~~~~~~~~~~~~   80 (159)
T cd00457           6 EVGPSGSVLPPEYSFEGVGRFPSLSWDGPPPDVKEYVLVMEDPDAPLG-----RPIVHGLVYGIPANKTSLSNDDFVVTD   80 (159)
T ss_pred             CcCCCCCccChhhccCCCCcCCceEecCCCCCCeEEEEEEECCCCCCC-----CCceEEEEeccCcccccccccccccCC
Confidence            3445 777777    666778999999875 57999999999999843     48999999999986421          


Q ss_pred             --Cccc----------eeeeeeCCCCcc--eeeeEEEEEEeecCccccCC-CCCCCCCcchhhhhhhCCCCceeEEEec
Q 030703          100 --SFGK----------EIVSYETPKPVV--GIHRYVFILFKQRGRQTVRP-PASRDHFNTRQFSAENGLGLPVAAVYFN  163 (173)
Q Consensus       100 --~~g~----------~~~~Y~~P~P~~--G~HRYvflly~q~~~~~~~~-~~~R~~F~~~~F~~~~~L~~pva~~~f~  163 (173)
                        ..+.          ....|.||+|+.  |.|||+|+||+|+..+.... ...|..+++.+|++.|.|+ ++|.++++
T Consensus        81 ~~~~~~~~~n~~g~~~~~~~Y~GP~PP~G~g~HrY~f~lyald~~~~~~~~~~~~~~~~~~~~~~~~vL~-~~a~~~~~  158 (159)
T cd00457          81 NGKGGLQGGFKYGKNRGGTVYIGPRPPLGHGPHRYFFQVYALDEPLDRSKLGDGRTKFEVARFAEGNVLG-AVGEWVGQ  158 (159)
T ss_pred             CCccceeccccccccCCCcCCcCCCCCCCCCCeeEEEEEEEecCccccccccCCCCHHHHHHHHHhCeee-EEEEEEEE
Confidence              0111          234999999954  69999999999998887542 3689999999999999997 68999886

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). A number of biological roles for members of the PEBP family include serine protease inhibition, membrane biogenesis, regulation of flowering plant stem architecture, and Raf-1 kinase inhibition. Although their overall structures are similar, the members of the PEBP family bind very different substrates including phospholipids, opioids, and hydrophobic odorant molecules as well as having different oligomerization states (monomer/dimer/tetramer).

>cd00865 PEBP_bact_arch PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea

Probab=99.76  E-value=3.3e-18  Score=128.73  Aligned_cols=94  Identities=27%  Similarity=0.412  Sum_probs=73.9

Q ss_pred             ccCCeeeeCCCC-cceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCC-CCCcc----------------ceeeeeeC
Q 030703           49 IAKPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTT-DASFG----------------KEIVSYET  110 (173)
Q Consensus        49 ~~~P~v~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~-~~~~g----------------~~~~~Y~~  110 (173)
                      ...|.|+|++.+ ..++|+|+|+|+|+|..     .+|+||+++||+.+. ....|                .....|.|
T Consensus        25 ~~SP~l~w~~~p~~t~s~al~m~D~Dap~~-----~~~~HW~~~nIp~~~~~i~~g~~~~~~~~~~~~g~n~~~~~~Y~g   99 (150)
T cd00865          25 NVSPPLSWSGVPAGTKSLALIVEDPDAPTG-----GGFVHWVVWNIPADTTELPEGASRGALPAGAVQGRNDFGEAGYGG   99 (150)
T ss_pred             CcCCCeEEcCCCCCCeEEEEEEEcCCCCCC-----CCEEEEEEeccCcccccccCCcccccCCCCCeEeecCCCCCeecC
Confidence            468999999865 57999999999999843     489999999999862 11111                24689999


Q ss_pred             CCCcc-eeeeEEEEEEeecCccccCCCCCCCCCcchhhhhhhC
Q 030703          111 PKPVV-GIHRYVFILFKQRGRQTVRPPASRDHFNTRQFSAENG  152 (173)
Q Consensus       111 P~P~~-G~HRYvflly~q~~~~~~~~~~~R~~F~~~~F~~~~~  152 (173)
                      |+|+. +.|||+|.||+++..+.+     ...++..++.++..
T Consensus       100 P~Pp~~~~HrY~f~vyAld~~l~~-----~~~~~~~~l~~ai~  137 (150)
T cd00865         100 PCPPDGGPHRYVFTVYALDVPLLL-----PPGATRAELLFAMK  137 (150)
T ss_pred             CCCcCCCceEEEEEEEEeCCccCC-----CCCCCHHHHHHHHh
Confidence            99975 899999999999988765     24677777776654

PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.

>PRK10257 putative kinase inhibitor protein; Provisional

Probab=99.74  E-value=6.7e-18  Score=127.87  Aligned_cols=80  Identities=28%  Similarity=0.490  Sum_probs=63.4

Q ss_pred             cCCeeeeCCCC-cceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCCC-----C-------ccc-------eeeeee
Q 030703           50 AKPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDA-----S-------FGK-------EIVSYE  109 (173)
Q Consensus        50 ~~P~v~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~~-----~-------~g~-------~~~~Y~  109 (173)
                      ..|.|+|++.. ..++|+|+|+|||+|...     .|+||+++||+++...     .       .|.       ....|.
T Consensus        30 ~SP~L~w~~~P~~t~s~ali~~DpDap~~~-----~~~HWvv~nIP~~~~~l~eg~~~~~~~~p~g~~~g~n~~g~~gY~  104 (158)
T PRK10257         30 ISPHLAWDDVPAGTKSFVVTCYDPDAPTGS-----GWWHWVVVNLPADTRVLPQGFGSGLVALPDGVLQTRTDFGKAGYG  104 (158)
T ss_pred             CCceEEEcCCCCCceEEEEEEECCCCCCCC-----cEEEEEEEcCCCCcccccCCCCcccccCCCCceeccccCCCccCc
Confidence            58999999764 469999999999998753     7999999999975311     0       011       246899


Q ss_pred             CCCCcce-eeeEEEEEEeecC-ccccC
Q 030703          110 TPKPVVG-IHRYVFILFKQRG-RQTVR  134 (173)
Q Consensus       110 ~P~P~~G-~HRYvflly~q~~-~~~~~  134 (173)
                      ||+|+.| .|||+|.||+++. .+.+.
T Consensus       105 GP~PP~g~~HrY~f~vyALd~~~L~l~  131 (158)
T PRK10257        105 GAAPPKGETHRYIFTVHALDVERIDVD  131 (158)
T ss_pred             CCCCccCCCceEEEEEEEecCcccCCC
Confidence            9999877 7999999999994 67764

>PRK09818 putative kinase inhibitor; Provisional

Probab=99.72  E-value=3e-17  Score=126.96  Aligned_cols=95  Identities=23%  Similarity=0.454  Sum_probs=71.5

Q ss_pred             ccccccceecccee---------ccCCeeeeCCCC-cceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCCC-----
Q 030703           35 KQVANGHELMPAVI---------IAKPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDA-----   99 (173)
Q Consensus        35 ~~v~~G~~l~~~~t---------~~~P~v~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~~-----   99 (173)
                      ..+..|..|+...+         ...|.++|++.+ ..++|+|+|.|||+|...     .|+||+++|||++...     
T Consensus        27 ~~f~~G~~ip~~~~~~~~~~~G~n~SP~L~W~~~P~gtks~aLi~~DpDaP~g~-----~~~HWvv~nIP~~~~~l~eg~  101 (183)
T PRK09818         27 NEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGAPEGTKSFAVTVYDPDAPTGS-----GWWHWTVANIPATVTYLPADA  101 (183)
T ss_pred             cCccCcCCCCHHHcccccCCCCCCcceeEEEccCCCCcEEEEEEEECCCCCCCC-----cEEEEEEEcCCCCccccCCCC
Confidence            45667888876542         268999999764 479999999999998753     7999999999975310     


Q ss_pred             --------Ccc-------ceeeeeeCCCCc--ceeeeEEEEEEeec-CccccC
Q 030703          100 --------SFG-------KEIVSYETPKPV--VGIHRYVFILFKQR-GRQTVR  134 (173)
Q Consensus       100 --------~~g-------~~~~~Y~~P~P~--~G~HRYvflly~q~-~~~~~~  134 (173)
                              ..|       -....|.||+|+  .|.|||+|.||+++ ..+.+.
T Consensus       102 ~~~~~~~~~~g~~~g~N~~g~~gY~GP~PP~G~g~HrY~F~vyALd~~~l~l~  154 (183)
T PRK09818        102 GRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTDKIPVD  154 (183)
T ss_pred             cccccccCCCCCEEeecCCCCCceECCCCccCCCCEEEEEEEEEecCcccCCC
Confidence                    001       124589999995  45899999999999 456654

>TIGR00481 Raf kinase inhibitor-like protein, YbhB/YbcL family

Probab=99.72  E-value=4.9e-17  Score=121.22  Aligned_cols=93  Identities=28%  Similarity=0.463  Sum_probs=71.9

Q ss_pred             cCCeeeeCCCC-cceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCC-----CC-------cc--------ceeeee
Q 030703           50 AKPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD-----AS-------FG--------KEIVSY  108 (173)
Q Consensus        50 ~~P~v~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~-----~~-------~g--------~~~~~Y  108 (173)
                      ..|.|+|++.. ..++|+|+|+|+|+|...     .|+||+++||+++..     ..       .|        -....|
T Consensus        14 ~SP~l~w~~~P~~t~s~al~~~D~Dap~~~-----~~~HWv~~nIp~~~~~l~e~~~~~~~~~~~g~~~~g~n~~g~~~Y   88 (141)
T TIGR00481        14 ISPPLSWDGVPEGAKSLALTCIDPDAPTGC-----GWWHWVVVNIPADTTVLPENASSDDKRLPQGVPLQGRNDFGKSGY   88 (141)
T ss_pred             CCcEEEEcCCCCCceEEEEEEECCCCCCCC-----CeEEEEEecCCCCcccccCCccccccccCCcceeEeeccCCCccE
Confidence            48999999764 478999999999998764     499999999998521     11       11        124699


Q ss_pred             eCCCCcceeeeEEEEEEeecCc-cccCCCCCCCCCcchhhhhhhC
Q 030703          109 ETPKPVVGIHRYVFILFKQRGR-QTVRPPASRDHFNTRQFSAENG  152 (173)
Q Consensus       109 ~~P~P~~G~HRYvflly~q~~~-~~~~~~~~R~~F~~~~F~~~~~  152 (173)
                      .||+|+.|.|||+|.||+++.. +.+.     .++...++.++..
T Consensus        89 ~GP~PP~g~HrY~f~vyALd~~~l~l~-----~~~~~~~l~~ai~  128 (141)
T TIGR00481        89 IGPCPPKGDHRYLFTVYALDTEKLDLD-----PGFSLADLGDAME  128 (141)
T ss_pred             eCCCCcCCCEEEEEEEEEecCCCCCCC-----CCCCHHHHHHHHh
Confidence            9999988889999999999976 7763     2566677766654

>COG1881 Phospholipid-binding protein [General function prediction only]

Probab=99.69  E-value=5.7e-17  Score=124.36  Aligned_cols=114  Identities=24%  Similarity=0.411  Sum_probs=79.2

Q ss_pred             ccccccceecccee----ccCCeeeeCCC-CcceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCC------CC---
Q 030703           35 KQVANGHELMPAVI----IAKPRVDIGGE-DMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD------AS---  100 (173)
Q Consensus        35 ~~v~~G~~l~~~~t----~~~P~v~~~~~-~~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~------~~---  100 (173)
                      ..+..|..++...+    ...|.++|++. ..+++|+|+|.|||||+.     ..|+||+++||+....      ..   
T Consensus        28 ~~f~~g~~ip~~~t~~g~~~sPpl~ws~~P~~tkS~AL~v~DpDAP~g-----~~~~HWvv~nIp~~~~~~~~~~~~~~~  102 (174)
T COG1881          28 NAFADGAPIPDEYTCGGPNISPPLSWSGVPEGTKSFALTVDDPDAPTG-----GGWVHWVVANIPADVTELPEGSGPKSK  102 (174)
T ss_pred             hhhhCCCccchhhhcCCCCcCCceeecCCCCCCeeEEEEEECCCCCCC-----CcEEEEEEEccCCcccccccccccccc
Confidence            56777888777654    57899999976 457999999999999975     3899999999997311      00   


Q ss_pred             c----c---ceeeeeeCCCCccee-eeEEEEEEeecCccccCCCCCCCCCcchhhhhhhCCC
Q 030703          101 F----G---KEIVSYETPKPVVGI-HRYVFILFKQRGRQTVRPPASRDHFNTRQFSAENGLG  154 (173)
Q Consensus       101 ~----g---~~~~~Y~~P~P~~G~-HRYvflly~q~~~~~~~~~~~R~~F~~~~F~~~~~L~  154 (173)
                      .    |   -.-..|.||+|+.|. |||.|.||+++...... +.+...=.+.+-++.|.|.
T Consensus       103 ~~~~qg~Nd~g~~~Y~Gp~PP~g~~HrY~f~vyALd~~~~~~-~~g~~~~~~~~~~~~hil~  163 (174)
T COG1881         103 IGIVQGINDFGSRGYGGPCPPKGHGHRYYFTVYALDVELLLL-PAGASGAELGKAMEGHILA  163 (174)
T ss_pred             cceEEeeccccccCcccCCCCCCCCeEEEEEEEEcccccccC-CCCCCHHHHHHHHHHHHHH
Confidence            0    1   123459999998776 99999999999854431 1122222334444555553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	173
1qou_A	181	Cen (Centroradialis) Protein From Antirrhinum Lengt		5e-67
1wko_A	180	Terminal Flower 1 (Tfl1) From Arabidopsis Thaliana		1e-65
3axy_A	170	Structure Of Florigen Activation Complex Consisting		4e-59
1wkp_A	171	Flowering Locus T (Ft) From Arabidopsis Thaliana Le		1e-54
2jyz_A	179	Cg7054 Solution Structure Length = 179		4e-25
1kn3_A	183	Murine Pebp-2 (Phosphatidylethanolamine-Binding Pro		2e-13
2iqx_A	187	Rat Phosphatidylethanolamine-Binding Protein Contai		3e-13
2iqy_A	190	Rat Phosphatidylethanolamine-Binding Protein Length		6e-13
1a44_A	185	Phosphatidylethanolamine Binding Protein From Calf		2e-12
1b7a_A	186	Structure Of The Phosphatidylethanolamine-Binding P		2e-12
1bd9_A	187	Human Phosphatidylethanolamine Binding Protein Leng		3e-11
1wpx_B	220	Crystal Structure Of Carboxypeptidase Y Inhibitor C		2e-07

>pdb|1QOU|A Chain A, Cen (Centroradialis) Protein From Antirrhinum Length = 181

Iteration: 1
 Score =  249 bits (636), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 119/176 (67%), Positives = 143/176 (81%), Gaps = 6/176 (3%)
Query: 4   TTDPLAVGRVVGDVVDTFIPSVKMNVIYNSN---KQVANGHELMPAVIIAKPRVDIGGED 60
           ++DPL +GRV+GDVVD F  +VKM+VIYNSN   K V NGHEL P+ + + PRV++ G D
Sbjct: 6   SSDPLVIGRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGD 65
Query: 61  MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRY 120
           MRS +TLIMTDPD P PSDP LREHLHW+VTDIPGTTD+SFGKE+VSYE P+P +GIHR+
Sbjct: 66  MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRF 125
Query: 121 VFILFKQ--RGRQTVRPP-ASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           VF+LFKQ  RG+  + PP   RD FNTR+F+ EN LGLPVAAV+FN QRETAARRR
Sbjct: 126 VFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRETAARRR 181

>pdb|1WKO|A Chain A, Terminal Flower 1 (Tfl1) From Arabidopsis Thaliana Length = 180

Iteration: 1
 Score =  244 bits (624), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 113/173 (65%), Positives = 143/173 (82%), Gaps = 2/173 (1%)
Query: 2   SRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
           +R  +PL +GRVVGDV+D F P+ KMNV YN  KQV+NGHEL P+ + +KPRV+I G D+
Sbjct: 9   TRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNK-KQVSNGHELFPSSVSSKPRVEIHGGDL 67
Query: 62  RSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYV 121
           RS +TL+M DPD P PSDP L+EHLHW+VT+IPGTTDA+FGKE+VSYE P+P +GIHR+V
Sbjct: 68  RSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFV 127
Query: 122 FILFKQRGRQTVRPPA-SRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           F+LF+Q+ R+ + P   SRDHFNTR+F+ E  LGLPVAAV+FNAQRETAAR+R
Sbjct: 128 FVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 180

>pdb|3AXY|A Chain A, Structure Of Florigen Activation Complex Consisting Of Rice Florigen Hd3a, 14-3-3 Protein Gf14 And Rice Fd Homolog Osfd1 Length = 170

Iteration: 1
 Score =  223 bits (568), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 104/165 (63%), Positives = 130/165 (78%), Gaps = 1/165 (0%)
Query: 3   RTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMR 62
           R  DPL VGRVVGDV+D F+ S  + V Y S K V+NG EL P+++  +PRV++GG DMR
Sbjct: 6   RDRDPLVVGRVVGDVLDAFVRSTNLKVTYGS-KTVSNGLELKPSMVTHQPRVEVGGNDMR 64
Query: 63  SAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVF 122
           + YTL+M DPDAPSPSDP LRE+LHW+VTDIPGTT ASFG+E++SYE+P+P +GIHR VF
Sbjct: 65  TFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVF 124
Query: 123 ILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRE 167
           +LF+Q GRQTV  P  R +FNT+ F+    LG PVAAVYFN+QRE
Sbjct: 125 VLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNSQRE 169

>pdb|1WKP|A Chain A, Flowering Locus T (Ft) From Arabidopsis Thaliana Length = 171

Iteration: 1
 Score =  208 bits (530), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 99/163 (60%), Positives = 122/163 (74%), Gaps = 1/163 (0%)
Query: 6   DPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAY 65
           DPL V RVVGDV+D F  S+ + V Y   ++V NG  L P+ +  KPRV+IGGED+R+ Y
Sbjct: 10  DPLIVSRVVGDVLDPFNRSITLKVTY-GQREVTNGLNLRPSQVQNKPRVEIGGEDLRNFY 68
Query: 66  TLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILF 125
           TL+M DPD PSPS+P LRE+LHW+VTDIP TT  +FG EIVSYE P P  GIHR VFILF
Sbjct: 69  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVSYENPSPTAGIHRVVFILF 128
Query: 126 KQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRET 168
           +Q GRQTV  P  R +FNTR+F+    LGLPVAAV++N+QRE+
Sbjct: 129 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNSQRES 171

>pdb|2JYZ|A Chain A, Cg7054 Solution Structure Length = 179

Iteration: 1
 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 95/165 (57%), Gaps = 11/165 (6%)
Query: 13  VVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRS-AYTLIMTD 71
           +V DV+D  +P+  + VIY  + +V  G+EL P  +  +P V   G + +S   TL+M D
Sbjct: 4   IVPDVLDA-VPAGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVD 62
Query: 72  PDAPSPSDPCLREHLHWMVTDIPGTTDA-SFGKEIVSY--ETPKPVVGIHRYVFILFKQR 128
           PDAP+  DP  RE LHW V +IPG+ +  S G  +  Y    P    G+HRY+F+L++Q 
Sbjct: 63  PDAPTRQDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQE 122
Query: 129 GRQTVRPPAS------RDHFNTRQFSAENGLGLPVAAVYFNAQRE 167
            +    P  S      R +FN R F+A++GLG P+AA Y+ AQ +
Sbjct: 123 NKIEETPTISNTTRTGRLNFNARDFAAKHGLGEPIAANYYQAQYD 167

>pdb|1KN3|A Chain A, Murine Pebp-2 (Phosphatidylethanolamine-Binding Protein-2) Length = 183

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKP-RVDIGGE 59
           MS  T PL++  V         P   + V Y   +    G  L P  +  +P  +   G 
Sbjct: 1   MSMWTGPLSLHEVDEQ------PQHLLRVTYTEAEVEELGQVLTPTQVKHRPGSISWDGL 54
Query: 60  DMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGI 117
           D    YTLI+TDPDAPS   P  RE  H++V ++ G  D S G  +  Y    P    G+
Sbjct: 55  DPGKLYTLILTDPDAPSRKKPVYREWHHFLVVNMKG-NDISSGNVLSDYVGSGPPKGTGL 113
Query: 118 HRYVFILFKQ----RGRQTVRPPASRDH---FNTRQFSAENGLGLPVAAVYFNAQRET 168
           HRYV+++++Q    R  + +    S DH   F T  F  +  LG PVA   + A+ ++
Sbjct: 114 HRYVWLVYQQDKPLRCDEPILTNRSGDHRGKFKTAAFRKKYHLGAPVAGTCYQAEWDS 171

>pdb|2IQX|A Chain A, Rat Phosphatidylethanolamine-Binding Protein Containing The S153e Mutation In The Complex With O-Phosphorylethanolamine Length = 187

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 40  GHELMPAVIIAKPR-VDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD 98
           G  L P  ++ +P  +   G D    YTL++TDPDAPS  DP  RE  H++V ++ G  D
Sbjct: 38  GKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKG-ND 96
Query: 99  ASFGKEIVSY--ETPKPVVGIHRYVFILFKQRGRQTVRPPA-------SRDHFNTRQFSA 149
            S G  +  Y    P    G+HRYV+++++Q        P        +R  F   +F  
Sbjct: 97  ISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVEEFRK 156
Query: 150 ENGLGLPVAAVYFNAQRETA 169
           +  LG PVA   F A+ + +
Sbjct: 157 KYHLGAPVAGTCFQAEWDDS 176

>pdb|2IQY|A Chain A, Rat Phosphatidylethanolamine-Binding Protein Length = 190

Iteration: 1
 Score = 70.1 bits (170), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 40  GHELMPAVIIAKPR-VDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD 98
           G  L P  ++ +P  +   G D    YTL++TDPDAPS  DP  RE  H++V ++ G  D
Sbjct: 41  GKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKG-ND 99
Query: 99  ASFGKEIVSY--ETPKPVVGIHRYVFILFKQRGRQTVRPPA-------SRDHFNTRQFSA 149
            S G  +  Y    P    G+HRYV+++++Q        P        +R  F    F  
Sbjct: 100 ISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRK 159
Query: 150 ENGLGLPVAAVYFNAQRETA 169
           +  LG PVA   F A+ + +
Sbjct: 160 KYHLGAPVAGTCFQAEWDDS 179

>pdb|1A44|A Chain A, Phosphatidylethanolamine Binding Protein From Calf Brain Length = 185

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKP-RVDIGGE 59
           +S+ + PL++  V         P   + V Y   +    G  L P  +  +P  +   G 
Sbjct: 4   LSKWSGPLSLQEV------DERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGL 57
Query: 60  DMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGI 117
           D    YTL++TDPDAPS  DP  RE  H++V ++ G  + S G  +  Y    P    G+
Sbjct: 58  DPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG-NNISSGTVLSDYVGSGPPKGTGL 116
Query: 118 HRYVFILFKQRGRQTVRPPA----SRDH---FNTRQFSAENGLGLPVAAVYFNAQRE 167
           HRYV+++++Q G      P     S DH   F    F  +  LG PVA   + A+ +
Sbjct: 117 HRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWD 173

>pdb|1B7A|A Chain A, Structure Of The Phosphatidylethanolamine-Binding Protein From Bovine Brain Length = 186

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKP-RVDIGGE 59
           +S+ + PL++  V         P   + V Y   +    G  L P  +  +P  +   G 
Sbjct: 4   LSKWSGPLSLQEV------DERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGL 57
Query: 60  DMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGI 117
           D    YTL++TDPDAPS  DP  RE  H++V ++ G  + S G  +  Y    P    G+
Sbjct: 58  DPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG-NNISSGTVLSDYVGSGPPKGTGL 116
Query: 118 HRYVFILFKQRGRQTVRPPA----SRDH---FNTRQFSAENGLGLPVAAVYFNAQRE 167
           HRYV+++++Q G      P     S DH   F    F  +  LG PVA   + A+ +
Sbjct: 117 HRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWD 173

>pdb|1BD9|A Chain A, Human Phosphatidylethanolamine Binding Protein Length = 187

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKP-RVDIGGE 59
           +S+ + PL++  V         P   ++V Y        G  L P  +  +P  +   G 
Sbjct: 5   LSKWSGPLSLQEV------DEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPTSISWDGL 58
Query: 60  DMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGI 117
           D    YTL++TDPDAPS  DP  RE  H++V ++ G  D S G  +  Y    P    G+
Sbjct: 59  DSGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG-NDISSGTVLSDYVGSGPPKGTGL 117
Query: 118 HRYVFILFKQ----RGRQTVRPPASRDH---FNTRQFSAENGLGLPVAAVYFNAQRE 167
           HRYV+++++Q    +  + +    S DH   F    F  +  L  PVA   + A+ +
Sbjct: 118 HRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELRAPVAGTCYQAEWD 174

>pdb|1WPX|B Chain B, Crystal Structure Of Carboxypeptidase Y Inhibitor Complexed With The Cognate Proteinase Length = 220

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 47/199 (23%)
Query: 13  VVGDVVD--TFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIG-GEDMRSA----- 64
           ++ DV+   +F PS  + V Y+S+  VA G+ L      +KP+      + M+ +     
Sbjct: 21  ILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQAN 80
Query: 65  ---------YTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDAS---------FGKE-- 104
                    +TL+MTDPDAPS +D    E  H +  D+    +A+         F  E  
Sbjct: 81  AYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFN 140
Query: 105 ------IVSYETPKPVVGI--HRYVFILFKQ-RGRQTVRPPASRDHFN---------TRQ 146
                 ++ Y  P P  G   HRYVF+L+KQ +G  + +    +D  N           +
Sbjct: 141 TKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTPATGVGK 200
Query: 147 FSAENGLGLPVAAVYFNAQ 165
           ++ EN L L VA+ +F A+
Sbjct: 201 WAKENNLQL-VASNFFYAE 218

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	173
1wko_A	180	Terminal flower 1 protein; CIS-peptide, PEBP, sign	1e-69
3axy_A	170	Protein heading DATE 3A; phosphatidylethanolamine-	2e-69
2jyz_A	179	CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo	5e-57
2gzq_A	200	Phosphatidylethanolamine-binding protein; structur	9e-53
1wpx_B	220	Carboxypeptidase Y inhibitor; carboxypeptidase inh	2e-52
2iqy_A	190	Phosphatidylethanolamine-binding protein 1; alpha-	5e-52
3n08_A	153	Putative phosphatidylethanolamine-binding protein;	2e-08
1fux_A	166	Hypothetical 19.5 kDa protein in EMRE-RUS intergen	3e-04

>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A Length = 180

 Score =  207 bits (529), Expect = 1e-69
 Identities = 112/173 (64%), Positives = 142/173 (82%), Gaps = 2/173 (1%)

Query: 2   SRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
           +R  +PL +GRVVGDV+D F P+ KMNV YN  KQV+NGHEL P+ + +KPRV+I G D+
Sbjct: 9   TRVIEPLIMGRVVGDVLDFFTPTTKMNVSYN-KKQVSNGHELFPSSVSSKPRVEIHGGDL 67

Query: 62  RSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYV 121
           RS +TL+M DPD P PSDP L+EHLHW+VT+IPGTTDA+FGKE+VSYE P+P +GIHR+V
Sbjct: 68  RSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFV 127

Query: 122 FILFKQRGRQTV-RPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETAARRR 173
           F+LF+Q+ R+ +     SRDHFNTR+F+ E  LGLPVAAV+FNAQRETAAR+R
Sbjct: 128 FVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 180

>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A Length = 170

 Score =  207 bits (527), Expect = 2e-69
 Identities = 103/165 (62%), Positives = 130/165 (78%), Gaps = 1/165 (0%)

Query: 3   RTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMR 62
           R  DPL VGRVVGDV+D F+ S  + V Y  +K V+NG EL P+++  +PRV++GG DMR
Sbjct: 6   RDRDPLVVGRVVGDVLDAFVRSTNLKVTYG-SKTVSNGLELKPSMVTHQPRVEVGGNDMR 64

Query: 63  SAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVF 122
           + YTL+M DPDAPSPSDP LRE+LHW+VTDIPGTT ASFG+E++SYE+P+P +GIHR VF
Sbjct: 65  TFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVF 124

Query: 123 ILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRE 167
           +LF+Q GRQTV  P  R +FNT+ F+    LG PVAAVYFN+QRE
Sbjct: 125 VLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNSQRE 169

>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster} Length = 179

 Score =  175 bits (446), Expect = 5e-57
 Identities = 63/168 (37%), Positives = 94/168 (55%), Gaps = 11/168 (6%)

Query: 10  VGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSA-YTLI 68
           +  +V DV+D   P+  + VIY  + +V  G+EL P  +  +P V   G + +S   TL+
Sbjct: 1   MDDIVPDVLDAV-PAGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLL 59

Query: 69  MTDPDAPSPSDPCLREHLHWMVTDIPGTTD-ASFGKEIVSYETP--KPVVGIHRYVFILF 125
           M DPDAP+  DP  RE LHW V +IPG+ +  S G  +  Y         G+HRY+F+L+
Sbjct: 60  MVDPDAPTRQDPKYREILHWSVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLY 119

Query: 126 KQRGRQTVRPPAS------RDHFNTRQFSAENGLGLPVAAVYFNAQRE 167
           +Q  +    P  S      R +FN R F+A++GLG P+AA Y+ AQ +
Sbjct: 120 RQENKIEETPTISNTTRTGRLNFNARDFAAKHGLGEPIAANYYQAQYD 167

>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A Length = 200

 Score =  165 bits (420), Expect = 9e-53
 Identities = 42/191 (21%), Positives = 69/191 (36%), Gaps = 25/191 (13%)

Query: 1   MSRTTDPLAVGRVVGDVV--DTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDI-- 56
              T + L   +++  V   +    +V M + + S K+V +G+ L  A   + PR     
Sbjct: 11  GPPTIEELKREKIIPHVFPDENVDLTVDMYISFKSGKEVNHGNILDLAGTGSVPRNIKFS 70

Query: 57  GGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTT----DASFGKEIVSYE--T 110
                   Y L M DPD PS   P  R+++HW V+ I               ++ Y   +
Sbjct: 71  EEPPEDYCYILFMIDPDFPSRRRPDGRDYVHWAVSGIKSKELVKGTDKNCITLLPYVGPS 130

Query: 111 PKPVVGIHRYVFILFKQRGRQTVRPPA----------SRDHFNTRQFSA----ENGLGLP 156
            K   G+HR  FIL   +                   +R  FN  Q +      N +   
Sbjct: 131 IKKGTGLHRISFILSLVKEENKGNVTGVPLYRGEHYITRVKFNNCQSAYNVIQMNDMK-I 189

Query: 157 VAAVYFNAQRE 167
           V   +   +R+
Sbjct: 190 VGFNWCQMRRK 200

>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1 Length = 220

 Score =  165 bits (419), Expect = 2e-52
 Identities = 49/212 (23%), Positives = 78/212 (36%), Gaps = 47/212 (22%)

Query: 2   SRTTDPLAVGRVVGDVVD--TFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGE 59
             + D      ++ DV+   +F PS  + V Y+S+  VA G+ L      +KP+      
Sbjct: 10  QASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFN 69

Query: 60  DMRSA---------------YTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDA----- 99
                               +TL+MTDPDAPS +D    E  H +  D+    +A     
Sbjct: 70  KQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETS 129

Query: 100 ------------SFGKEIVSYETPKPVVGI--HRYVFILFKQRGRQTVRPPA-------- 137
                            ++ Y  P P  G   HRYVF+L+KQ         +        
Sbjct: 130 GATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNW 189

Query: 138 --SRDHFNTRQFSAENGLGLPVAAVYFNAQRE 167
                     +++ EN L   VA+ +F A+ +
Sbjct: 190 GYGTPATGVGKWAKENNLQ-LVASNFFYAETK 220

>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A Length = 190

 Score =  163 bits (414), Expect = 5e-52
 Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 12/167 (7%)

Query: 11  GRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPR-VDIGGEDMRSAYTLIM 69
           G +    VD   P   + V Y        G  L P  ++ +P  +   G D    YTL++
Sbjct: 13  GPLSLQEVD-EPPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVL 71

Query: 70  TDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSY--ETPKPVVGIHRYVFILFKQ 127
           TDPDAPS  DP  RE  H++V ++ G  D S G  +  Y    P    G+HRYV+++++Q
Sbjct: 72  TDPDAPSRKDPKFREWHHFLVVNMKG-NDISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQ 130

Query: 128 RGRQTVRPPA-------SRDHFNTRQFSAENGLGLPVAAVYFNAQRE 167
                   P        +R  F    F  +  LG PVA   F A+ +
Sbjct: 131 EQPLNCDEPILSNKSGDNRGKFKVESFRKKYHLGAPVAGTCFQAEWD 177

>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} Length = 153

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 17/75 (22%)

Query: 65  YTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDA--------------SFGKEIVSYET 110
             LI+ DPD P          +HW+V ++                    + G+  + Y  
Sbjct: 44  LVLIVEDPDVPPSVRE-DGLWIHWIVYNLSPVVSNLAEGAQIFAVQGLNTAGE--IGYCP 100

Query: 111 PKPVVGIHRYVFILF 125
           P P    HRY F  +
Sbjct: 101 PCPPDAKHRYYFYAY 115

>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2 Length = 166

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 31/85 (36%)

Query: 65  YTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDA----------------------SFG 102
           + + + DPDAP+ S        HW V +IP T                          FG
Sbjct: 48  FAVTVYDPDAPTGSGWW-----HWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFG 102

Query: 103 KEIVSYETPKPVVG--IHRYVFILF 125
                +    P  G   H Y F ++
Sbjct: 103 Y--AGFGGACPPKGDKPHHYQFKVW 125

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	173
1wko_A	180	Terminal flower 1 protein; CIS-peptide, PEBP, sign	100.0
3axy_A	170	Protein heading DATE 3A; phosphatidylethanolamine-	100.0
2iqy_A	190	Phosphatidylethanolamine-binding protein 1; alpha-	100.0
2jyz_A	179	CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular mo	100.0
2gzq_A	200	Phosphatidylethanolamine-binding protein; structur	100.0
1wpx_B	220	Carboxypeptidase Y inhibitor; carboxypeptidase inh	100.0
1fux_A	166	Hypothetical 19.5 kDa protein in EMRE-RUS intergen	99.88
3n08_A	153	Putative phosphatidylethanolamine-binding protein;	99.87
1fjj_A	159	Hypothetical 17.1 kDa protein in MODC-BIOA interge	99.86
2evv_A	207	Hypothetical protein HP0218; alpha-beta structure,	99.8

>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A

Probab=100.00  E-value=6.2e-55  Score=336.35  Aligned_cols=172  Identities=66%  Similarity=1.140  Sum_probs=155.7

Q ss_pred             CCCCCCceeeeeeccccccccccceEEEEEEcCcccccccceeccceeccCCeeeeCCCCcceeEEEEEeCCCCCCCCCc
Q 030703            1 MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDP   80 (173)
Q Consensus         1 ~~~~~~~l~~~~iipdvl~~f~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~~~~~~~ytlvmvDpD~p~~~~~   80 (173)
                      |+.+.++|++++||||+++.|.|+..|+|.|++ ..|.+|+.|+++++..+|+|+|++.+.+++|||+|+|||+|+++++
T Consensus         8 ~~~~~~~l~~~~vipdvl~~f~P~~~l~V~y~s-~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DPDaP~~~~p   86 (180)
T 1wko_A            8 GTRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNK-KQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMIDPDVPGPSDP   86 (180)
T ss_dssp             --CTTHHHHHTTHHHHTBCCCCCCSEEEEEETT-EECCTTCBCCGGGGSSCCEEEEESSCTTCEEEEEEEECSCSBTTBC
T ss_pred             HHHHHHHHHhCCCCCCccCCcCCCeeEEEEECC-eEcCCCCCcCHHHhCcCCeEEEecCCCCceEEEEEeCCCCCCCccC
Confidence            788999999999999999999999999999987 8999999999999999999999987656799999999999999999


Q ss_pred             chhceeeeEeecCCCCCCCCccceeeeeeCCCCcceeeeEEEEEEeecCccccCC-CCCCCCCcchhhhhhhCCCCceeE
Q 030703           81 CLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRGRQTVRP-PASRDHFNTRQFSAENGLGLPVAA  159 (173)
Q Consensus        81 ~~~~~lHwl~~ni~~~~~~~~g~~~~~Y~~P~P~~G~HRYvflly~q~~~~~~~~-~~~R~~F~~~~F~~~~~L~~pva~  159 (173)
                      ++++|||||++||+++.....|..+++|.||+|++|.|||+|+||+|+..+.+.+ +..|.+||+++|+++|+|+.|||+
T Consensus        87 ~~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp~G~HRYvf~ly~q~~~l~~~~~~~~R~~F~~~~F~~~~~Lg~PVa~  166 (180)
T 1wko_A           87 FLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVAA  166 (180)
T ss_dssp             TTCCEEEEEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECCTTCCCCCCCCCSTTCCHHHHHHHTTCCSEEEE
T ss_pred             CCccEEEEEEeccCcCccccCCceeeeeCCCCCCCCceEEEEEEEecCCccCCCCCccccCCcCHHHHHHHhCCCCcEEE
Confidence            9999999999999998666678999999999999999999999999999887764 789999999999999999999999


Q ss_pred             EEeccccchhhccC
Q 030703          160 VYFNAQRETAARRR  173 (173)
Q Consensus       160 ~~f~~~~~~~~~~~  173 (173)
                      |||++|||+++|||
T Consensus       167 ~fF~~q~d~~~r~~  180 (180)
T 1wko_A          167 VFFNAQRETAARKR  180 (180)
T ss_dssp             EEEEECCC------
T ss_pred             EEEEEEECCcccCC
Confidence            99999999999997

>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A

Probab=100.00  E-value=6.1e-53  Score=322.54  Aligned_cols=166  Identities=63%  Similarity=1.081  Sum_probs=156.7

Q ss_pred             CCCCCCceeeeeeccccccccccceEEEEEEcCcccccccceeccceeccCCeeeeCCCCcceeEEEEEeCCCCCCCCCc
Q 030703            1 MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDP   80 (173)
Q Consensus         1 ~~~~~~~l~~~~iipdvl~~f~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~~~~~~~ytlvmvDpD~p~~~~~   80 (173)
                      |+. +++|++++|||||++.|.|++.|.|+|++ ..|.+|+.|+++++..+|+|+|++.+.+++|||+|+|||+|+++++
T Consensus         5 m~~-~~~l~~~~vipdvl~~F~P~~~l~v~y~s-~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DpDaP~~~~p   82 (170)
T 3axy_A            5 MRD-RDPLVVGRVVGDVLDAFVRSTNLKVTYGS-KTVSNGLELKPSMVTHQPRVEVGGNDMRTFYTLVMVDPDAPSPSDP   82 (170)
T ss_dssp             CCT-TCHHHHTTHHHHTBCCCCCCSCEEEEETT-EECCTTEECCGGGSSSCCEEEECCSCTTCEEEEEEEETTCSCTTSC
T ss_pred             cch-hchhhhCCccccccCCcCCceEEEEEECC-eEcCCCCEeCHHHhCcCCeEEEeCCCCCcEEEEEEECCCCCCCccC
Confidence            654 89999999999999999999999999987 8999999999999999999999987667999999999999999999


Q ss_pred             chhceeeeEeecCCCCCCCCccceeeeeeCCCCcceeeeEEEEEEeecCccccCCCCCCCCCcchhhhhhhCCCCceeEE
Q 030703           81 CLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRGRQTVRPPASRDHFNTRQFSAENGLGLPVAAV  160 (173)
Q Consensus        81 ~~~~~lHwl~~ni~~~~~~~~g~~~~~Y~~P~P~~G~HRYvflly~q~~~~~~~~~~~R~~F~~~~F~~~~~L~~pva~~  160 (173)
                      ++++||||+++||+++.+.+.|+.+++|.||+|++|.|||+|+||+|+..+++.++..|.+||+++|+++|+|+.|||+|
T Consensus        83 ~~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp~G~HRY~f~ly~q~~~l~~~~p~~R~~F~~~~F~~~~~Lg~Pva~~  162 (170)
T 3axy_A           83 NLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVFVLFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAV  162 (170)
T ss_dssp             TTCSEEEEEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECSSCCCCCCCSCSTTCCHHHHHHHTTCCSCSEEE
T ss_pred             CCccEEEEEEeCCCCCccccCCceeceecCCCCCCCcEEEEEEEEecCCccCCCCccccCCcCHHHHHHHhCCCCcEEEE
Confidence            99999999999999986667788899999999999999999999999999888778899999999999999999999999


Q ss_pred             Eeccccch
Q 030703          161 YFNAQRET  168 (173)
Q Consensus       161 ~f~~~~~~  168 (173)
                      ||++|||+
T Consensus       163 fF~~q~d~  170 (170)
T 3axy_A          163 YFNSQREA  170 (170)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEecC
Confidence            99999984

>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A

Probab=100.00  E-value=3.2e-48  Score=301.15  Aligned_cols=166  Identities=30%  Similarity=0.535  Sum_probs=152.4

Q ss_pred             CCCCceee--eeeccccccccccceEEEEEEcCcccccccceeccceeccCCe-eeeCCCCcceeEEEEEeCCCCCCCCC
Q 030703            3 RTTDPLAV--GRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPR-VDIGGEDMRSAYTLIMTDPDAPSPSD   79 (173)
Q Consensus         3 ~~~~~l~~--~~iipdvl~~f~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~-v~~~~~~~~~~ytlvmvDpD~p~~~~   79 (173)
                      .+.++|++  ++||||+++. .|+..|.|+|+++..|.+|+.|+++++...|+ |+|++.+.+++|||+|+|||+|++++
T Consensus         3 ~~~~~~~~~~~~vipdvl~~-~p~~~l~v~~~~~~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~ytlvm~DpDaP~~~~   81 (190)
T 2iqy_A            3 AMAADISQWAGPLSLQEVDE-PPQHALRVDYGGVTVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKD   81 (190)
T ss_dssp             CSSCCGGGTTSTTCGGGTSS-CCSEECEEECSSCBCCSTTEECCGGGGSSCCSEEECTTCCTTSEEEEEEEESSSSCSSS
T ss_pred             HHHHHHHHhcCccCCcCcCC-CCCceEEEEECCCcccCCCCEECHHHHhCCCceEEEccCCCCCEEEEEEECCCCCCCCC
Confidence            36788999  9999999998 99999999997768999999999999999999 99998765799999999999999999


Q ss_pred             cchhceeeeEeecCCCCCCCCccceeeeeeCCCCc--ceeeeEEEEEEeecCccccCC-------CCCCCCCcchhhhhh
Q 030703           80 PCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPV--VGIHRYVFILFKQRGRQTVRP-------PASRDHFNTRQFSAE  150 (173)
Q Consensus        80 ~~~~~~lHwl~~ni~~~~~~~~g~~~~~Y~~P~P~--~G~HRYvflly~q~~~~~~~~-------~~~R~~F~~~~F~~~  150 (173)
                      +++++|+||+++||+++ +...|..+++|.||+|+  +|.|||+|+||+|+..+++.+       ...|.+||+++|+++
T Consensus        82 p~~~~~~HWlv~nIp~~-~~~~G~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~~~~~~l~~~~~~~R~~F~~~~F~~~  160 (190)
T 2iqy_A           82 PKFREWHHFLVVNMKGN-DISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKK  160 (190)
T ss_dssp             CTTCCEEEEEEEEEETT-BGGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCSCCBCTTCCTTCSSCCHHHHHHH
T ss_pred             CCcCCEEEEEEeCCChh-ccccCccccceeCCCCcCCCCceEEEEEEEEeCCccCcchhhccCCCcccCCCcCHHHHHHH
Confidence            99999999999999988 66788899999999994  789999999999999876542       578999999999999


Q ss_pred             hCCCCceeEEEeccccchhh
Q 030703          151 NGLGLPVAAVYFNAQRETAA  170 (173)
Q Consensus       151 ~~L~~pva~~~f~~~~~~~~  170 (173)
                      |+|+.|||+|||++|||++.
T Consensus       161 ~~Lg~pVA~~fF~~q~d~~v  180 (190)
T 2iqy_A          161 YHLGAPVAGTCFQAEWDDSV  180 (190)
T ss_dssp             TTCCSCSEEEEEEECCCTTH
T ss_pred             hCCCCeeEEEEEEEEccCch
Confidence            99999999999999999854

>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster}

Probab=100.00  E-value=3.1e-47  Score=293.17  Aligned_cols=158  Identities=39%  Similarity=0.733  Sum_probs=144.0

Q ss_pred             eeeccccccccccceEEEEEEcCcccccccceeccceeccCCeeeeCCCCc-ceeEEEEEeCCCCCCCCCcchhceeeeE
Q 030703           11 GRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM-RSAYTLIMTDPDAPSPSDPCLREHLHWM   89 (173)
Q Consensus        11 ~~iipdvl~~f~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~~~~-~~~ytlvmvDpD~p~~~~~~~~~~lHwl   89 (173)
                      ++||||+++. .|+..|.|+|+++..|.+|+.|+++++...|+|+|++.+. +++|||+|+|||+|+++++++++|+||+
T Consensus         2 ~~vipdvl~~-~P~~~l~V~y~~~~~v~~G~~l~~~~~~~~P~l~~~~~p~~t~~ytlvm~DpDaP~~~~p~~~~~~HWl   80 (179)
T 2jyz_A            2 DDIVPDVLDA-VPAGTIKVIYGDDLEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVDPDAPTRQDPKYREILHWS   80 (179)
T ss_dssp             CCBTTTTBSS-CCSEECEEESSSSCCBCTTEECCSSCTTSCCEEECTTTCCSCSEEEEEEECCCSSCTTCCSSCCCSCCE
T ss_pred             CcccCcCcCC-CCcCeEEEEECCCcccCCCCEeCHHHhccCCeEEEeCCCCCceeEEEEEeCCCCCCCccCCCccEEEEE
Confidence            6899999999 9999999999866899999999999999999999987654 4999999999999999999999999999


Q ss_pred             eecCCCCC-CCCccceeeeeeCCCCc--ceeeeEEEEEEeecCccccC-------CCCCCCCCcchhhhhhhCCCCceeE
Q 030703           90 VTDIPGTT-DASFGKEIVSYETPKPV--VGIHRYVFILFKQRGRQTVR-------PPASRDHFNTRQFSAENGLGLPVAA  159 (173)
Q Consensus        90 ~~ni~~~~-~~~~g~~~~~Y~~P~P~--~G~HRYvflly~q~~~~~~~-------~~~~R~~F~~~~F~~~~~L~~pva~  159 (173)
                      ++||+++. +...|..+++|.||+|+  +|.|||+|+||+|+..++ .       ....|.+||+++|+++|+|+.||||
T Consensus        81 v~nIp~~~~~l~~g~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~-~~~~l~~~~~~~R~~F~~~~F~~~~~Lg~pvA~  159 (179)
T 2jyz_A           81 VVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQENKIE-ETPTISNTTRTGRLNFNARDFAAKHGLGEPIAA  159 (179)
T ss_dssp             EECCCTTSSSTTSSEEEECCCSCCSCGGGCSEEEEEEEEEECSCCC-CSSCBCTTCCSSSCCCCTHHHHHHTTCCSCSEE
T ss_pred             EECCCCCccccCcccccccccCCCCCCCCCceEEEEEEEEcCCcCC-chhhccCCCcccCCCcCHHHHHHHhCCCCccEE
Confidence            99999874 56678899999999994  779999999999998776 2       2578999999999999999999999


Q ss_pred             EEeccccchhh
Q 030703          160 VYFNAQRETAA  170 (173)
Q Consensus       160 ~~f~~~~~~~~  170 (173)
                      |||++|||++.
T Consensus       160 ~~F~~q~d~~v  170 (179)
T 2jyz_A          160 NYYQAQYDDYV  170 (179)
T ss_dssp             EEEEECCCTHH
T ss_pred             EEEEEEecCch
Confidence            99999999853

>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A

Probab=100.00  E-value=9e-46  Score=289.42  Aligned_cols=164  Identities=27%  Similarity=0.392  Sum_probs=144.1

Q ss_pred             CCCCCceeeeeecccccc--ccccceEEEEEEcCcccccccceeccceeccCCe-eeeCCCC-cceeEEEEEeCCCCCCC
Q 030703            2 SRTTDPLAVGRVVGDVVD--TFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPR-VDIGGED-MRSAYTLIMTDPDAPSP   77 (173)
Q Consensus         2 ~~~~~~l~~~~iipdvl~--~f~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~-v~~~~~~-~~~~ytlvmvDpD~p~~   77 (173)
                      +.++++|++++||||+++  .|+|++.|.|+|+++..|.+|+.|+++++..+|+ |+|++.+ .+++|||+|+|||+|++
T Consensus        12 ~~~~~~l~~~~IipDvl~~~~f~p~~~L~V~y~~~~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~~ytLvm~DPDaP~~   91 (200)
T 2gzq_A           12 PPTIEELKREKIIPHVFPDENVDLTVDMYISFKSGKEVNHGNILDLAGTGSVPRNIKFSEEPPEDYCYILFMIDPDFPSR   91 (200)
T ss_dssp             SCCHHHHHHTTHHHHTSSSSCCCCCCCEEEEEETTEEECSSCEEESTTCSSCCSEEEESSCCCTTEEEEEEEEETTCSCS
T ss_pred             HHHHHHHHhCCccCcccCCCCCcceeEEEEEECCCcccCCCCEeCHHHHhCCCceEEEccCCCCCceEEEEEECCCCCCC
Confidence            467899999999999996  4999999999999668999999999999999999 9999764 37999999999999999


Q ss_pred             CCcchhceeeeEeecCCCCCCCCcc-----ceeeeeeCCCC--cceeeeEEEEEE--eecCccccCC---C-----CCCC
Q 030703           78 SDPCLREHLHWMVTDIPGTTDASFG-----KEIVSYETPKP--VVGIHRYVFILF--KQRGRQTVRP---P-----ASRD  140 (173)
Q Consensus        78 ~~~~~~~~lHwl~~ni~~~~~~~~g-----~~~~~Y~~P~P--~~G~HRYvflly--~q~~~~~~~~---~-----~~R~  140 (173)
                      +++++++||||+++||+++. ...|     ..+++|.||+|  ++|.|||+|+||  +|+..+++..   .     .+|.
T Consensus        92 ~~~~~~~~~HWlv~nIp~~~-~~~g~~~~~~~~~~Y~gP~Pp~g~g~HRYvF~l~~fkQ~~~~~~~~~p~~~~~~~~~R~  170 (200)
T 2gzq_A           92 RRPDGRDYVHWAVSGIKSKE-LVKGTDKNCITLLPYVGPSIKKGTGLHRISFILSLVKEENKGNVTGVPLYRGEHYITRV  170 (200)
T ss_dssp             SCCTTCSEEEEEEEEECSSE-EETTCCTTCEEEECCCCCCCCTTSCCEEEEEEEEEEEGGGTTCBTTBCCCCCGGGCCTT
T ss_pred             CCCCCCCEEEEEEeCCCcCc-ccCCccCCCcceeeeeCCCCcCCCCcceEEEEEEEecccCcccccccCccccccccccC
Confidence            99999999999999999862 2233     37899999999  678999999986  9998776532   2     3899


Q ss_pred             CCcch----hhhhhhCCCCceeEEEeccccc
Q 030703          141 HFNTR----QFSAENGLGLPVAAVYFNAQRE  167 (173)
Q Consensus       141 ~F~~~----~F~~~~~L~~pva~~~f~~~~~  167 (173)
                      +||++    +|++++|| .|||+|||++|++
T Consensus       171 ~F~~~~gv~~F~~~~gL-~pVganfF~~~n~  200 (200)
T 2gzq_A          171 KFNNCQSAYNVIQMNDM-KIVGFNWCQMRRK  200 (200)
T ss_dssp             HHHHTCCHHHHHHHTTC-EEEEEEEEEEECC
T ss_pred             ccccchhhHHHHHHcCC-EEEEEEEEEEecC
Confidence            99998    89999999 5899999999974

>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1

Probab=100.00  E-value=2.7e-45  Score=290.66  Aligned_cols=164  Identities=31%  Similarity=0.472  Sum_probs=143.9

Q ss_pred             CCCCceeeeeeccccccc--cccceEEEEEEcCcccccccceeccceeccCCeeeeCC----------C-----CcceeE
Q 030703            3 RTTDPLAVGRVVGDVVDT--FIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGG----------E-----DMRSAY   65 (173)
Q Consensus         3 ~~~~~l~~~~iipdvl~~--f~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~----------~-----~~~~~y   65 (173)
                      +++++|++++|||||++.  |.|+..|.|+|+++..|.+|+.|+++++...|.|+|..          .     +.+++|
T Consensus        11 ~~~~~l~~~~IipDvl~~~~F~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~~~~~~~~~~~~~~~~p~~~~~~   90 (220)
T 1wpx_B           11 ASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDLF   90 (220)
T ss_dssp             HHHHHHHHTTHHHHTSCCTTCCCSEEEEEEEETTEEECSSCBCCGGGGSSCCEEEEEEETTCC------CCCCCCSSCCE
T ss_pred             HHHHHHHhCCCCccccCCcCCCCceEEEEEECCCcEeCCCCCcCHHHhcCCCeeEeCCCCCcccccccccccCCCCCceE
Confidence            467899999999999998  99999999999986779999999999999999998871          1     247999


Q ss_pred             EEEEeCCCCCCCCCcchhceeeeEeecCCCCCC-------C---------Ccc-ceeeeeeCCCCc--ceeeeEEEEEEe
Q 030703           66 TLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD-------A---------SFG-KEIVSYETPKPV--VGIHRYVFILFK  126 (173)
Q Consensus        66 tlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~-------~---------~~g-~~~~~Y~~P~P~--~G~HRYvflly~  126 (173)
                      +|+|+|||+|++.++++++|+||+++||+++..       .         +.| ...++|.||+|+  +|.|||+|+||+
T Consensus        91 ~lvm~DpDaP~~~~p~~~~~~HW~v~nIp~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~Y~gP~Pp~g~g~HRY~f~lya  170 (220)
T 1wpx_B           91 TLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYK  170 (220)
T ss_dssp             EEEEEESSSSCSSCCTTCSEEEEEEEEEEECC---------CCEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEEE
T ss_pred             EEEEECCCCCCCCCCCcCcEEEEEEEccCCCccccccccCCCCccceEeecCCccccccccCCCCccCCCCceEEEEEEe
Confidence            999999999999999999999999999987521       0         235 678999999995  679999999999


Q ss_pred             ecCccccC---CCCCCCCCc-------chhhhhhhCCCCceeEEEeccccc
Q 030703          127 QRGRQTVR---PPASRDHFN-------TRQFSAENGLGLPVAAVYFNAQRE  167 (173)
Q Consensus       127 q~~~~~~~---~~~~R~~F~-------~~~F~~~~~L~~pva~~~f~~~~~  167 (173)
                      |+..+++.   ++..|.+|+       +++|+++|+| .|||+|||++||+
T Consensus       171 ~~~~l~~~~~~~~~~R~~f~~~~~~f~~~~F~~~~~L-~pVAanfF~~q~~  220 (220)
T 1wpx_B          171 QPKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNL-QLVASNFFYAETK  220 (220)
T ss_dssp             CCTTCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTC-EEEEEEEEEECCC
T ss_pred             cCCcCCccccCCcccccCCCccccchhHHHHHHHhCC-eEEEEEEEEEecC
Confidence            99987643   467888998       9999999999 6899999999986

>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2

Probab=99.88  E-value=5.4e-23  Score=156.07  Aligned_cols=95  Identities=21%  Similarity=0.447  Sum_probs=76.2

Q ss_pred             ccccccceeccceecc---------CCeeeeCCCC-cceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCC-CCcc-
Q 030703           35 KQVANGHELMPAVIIA---------KPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD-ASFG-  102 (173)
Q Consensus        35 ~~v~~G~~l~~~~t~~---------~P~v~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~-~~~g-  102 (173)
                      ..+..|..|++..+..         .|.|+|++.+ .+++|+|+|+|||+|++     +.|+||+++||+++.. ...| 
T Consensus         8 ~~~~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g~   82 (166)
T 1fux_A            8 NEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTG-----SGWWHWTVVNIPATVTYLPVDA   82 (166)
T ss_dssp             SSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTTT
T ss_pred             cCcCCcCCCCHHHhccccccCCCCcCCeEEEeCCCCCCeEEEEEEECCCCCCC-----CcEEEeEEeCcCCCcccccCCc
Confidence            4677899999988766         9999998764 47999999999999975     3799999999987631 1111 


Q ss_pred             -----------c-------eeeeeeCCCCc--ceeeeEEEEEEeecC-ccccC
Q 030703          103 -----------K-------EIVSYETPKPV--VGIHRYVFILFKQRG-RQTVR  134 (173)
Q Consensus       103 -----------~-------~~~~Y~~P~P~--~G~HRYvflly~q~~-~~~~~  134 (173)
                                 .       ....|.||+|+  +|.|||+|+||+|+. .+.++
T Consensus        83 ~~~~~~~l~~g~~~g~nd~g~~~Y~GP~PP~g~g~HRY~F~lyald~~~l~l~  135 (166)
T 1fux_A           83 GRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVD  135 (166)
T ss_dssp             TCTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCC
T ss_pred             cccccccCCCCcEEeecCCCCccccCCCCcCCCCcEEEEEEEeEeccccCCCC
Confidence                       1       46899999995  458999999999997 67764

>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0

Probab=99.87  E-value=2e-22  Score=150.92  Aligned_cols=112  Identities=18%  Similarity=0.284  Sum_probs=84.0

Q ss_pred             ccccccceecccee----ccCCeeeeCCCC-cceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCC-CCcc------
Q 030703           35 KQVANGHELMPAVI----IAKPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD-ASFG------  102 (173)
Q Consensus        35 ~~v~~G~~l~~~~t----~~~P~v~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~-~~~g------  102 (173)
                      ..+..|..|+...+    ...|.|+|++.+ .+++|+|+|+|||+|++.++ .+.|+||+++||+++.. ...|      
T Consensus         9 ~~f~~g~~ip~~~t~~G~n~SP~l~w~~~P~~tks~ali~~DpDAPs~~~~-~~~~~HWvv~nIp~~~~~l~~g~~~g~~   87 (153)
T 3n08_A            9 QAFSYGRPIPKKYSCQGVGISPPLSFSDVPREAKSLVLIVEDPDVPPSVRE-DGLWIHWIVYNLSPVVSNLAEGAQIFAV   87 (153)
T ss_dssp             TTBCTTEECCGGGSTTSCCCCCCEEEECCCTTCCEEEEEEEETTSCTTTCT-TSCEEEEEEEEECTTCCEECTTCCCSSE
T ss_pred             CCcCCCCCCCHHHcCCCCCcCcEEEEcCCCCCCeEEEEEEECCCCCCccCC-CCcEEEEEEEcCCCCcccccCCCCCCce
Confidence            34556666666543    478999999764 46999999999999987764 46899999999998632 1111      


Q ss_pred             -----ceeeeeeCCCCcceeeeEEEEEEeecCccccCCCCCCCCCcchhhhhhhC
Q 030703          103 -----KEIVSYETPKPVVGIHRYVFILFKQRGRQTVRPPASRDHFNTRQFSAENG  152 (173)
Q Consensus       103 -----~~~~~Y~~P~P~~G~HRYvflly~q~~~~~~~~~~~R~~F~~~~F~~~~~  152 (173)
                           -....|.||+|+.|.|||+|+||+|+..+.++     .++...++.++..
T Consensus        88 ~g~n~~g~~~Y~GP~PP~g~HrY~F~vyAld~~L~l~-----~~~~~~~l~~a~~  137 (153)
T 3n08_A           88 QGLNTAGEIGYCPPCPPDAKHRYYFYAYALDVVLSDE-----EGVTKEQLLEAMD  137 (153)
T ss_dssp             ECBCTTSSBSCCCCCCSSSCEEEEEEEEEESSCCCCC-----SSCCHHHHHHHHT
T ss_pred             EeecCCCCccccCCcCcCCCEEEEEEEEEECCcCCCC-----CCCCHHHHHHHhh
Confidence                 14689999999888899999999999987664     2455555555543

>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*

Probab=99.86  E-value=8.6e-22  Score=148.46  Aligned_cols=81  Identities=26%  Similarity=0.470  Sum_probs=65.4

Q ss_pred             ccCCeeeeCCC-CcceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCC-CCccc------------------eeeee
Q 030703           49 IAKPRVDIGGE-DMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD-ASFGK------------------EIVSY  108 (173)
Q Consensus        49 ~~~P~v~~~~~-~~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~-~~~g~------------------~~~~Y  108 (173)
                      ...|.|+|++. +.+++|+|+|+|||+|++     +.|+||+++||+++.. ...|.                  ....|
T Consensus        30 n~sP~l~w~~~P~~t~s~ali~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g~~~~~~~~~~g~~~g~n~~g~~~Y  104 (159)
T 1fjj_A           30 NISPHLAWDDVPAGTKSFVVTCYDPDAPTG-----SGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGY  104 (159)
T ss_dssp             CCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTTGGGTSSCCCTTCEECBCTTSSBSC
T ss_pred             CcCCeEEEcCCCCCCeEEEEEEECCCCCCC-----CcEEEEEEEccCCCccccCCCcccccccCCCCcEEeecCCCCCcc
Confidence            46889999876 357999999999999976     3799999999997631 11111                  36899


Q ss_pred             eCCCCcce-eeeEEEEEEeecC-ccccC
Q 030703          109 ETPKPVVG-IHRYVFILFKQRG-RQTVR  134 (173)
Q Consensus       109 ~~P~P~~G-~HRYvflly~q~~-~~~~~  134 (173)
                      .||+|+.| .|||+|+||+|+. .+.++
T Consensus       105 ~GP~PP~g~~HRY~F~lyald~~~l~l~  132 (159)
T 1fjj_A          105 DGAAPPKGETHRYIFTVHALDIERIDVD  132 (159)
T ss_dssp             CCBCCSTTCCEEEEEEEEEESSSCCSCC
T ss_pred             cCCCCcCCCceEEEEEEEEccCcccCCC
Confidence            99999877 8999999999997 67764

>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori}

Probab=99.80  E-value=5.6e-20  Score=143.59  Aligned_cols=104  Identities=17%  Similarity=0.299  Sum_probs=74.7

Q ss_pred             cceeccc--eeccCCeeeeCCCCcceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCCCC-----------------
Q 030703           40 GHELMPA--VIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDAS-----------------  100 (173)
Q Consensus        40 G~~l~~~--~t~~~P~v~~~~~~~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~~~-----------------  100 (173)
                      |..++|.  .-...|.|+|++.+.+++|+|+|+|||+|++.   .++|+||+++||+.+. ..                 
T Consensus        47 G~~~sP~~~~p~~Sp~L~W~~~~gtks~aLvm~DPDAP~~~---g~~~~HWvv~NI~~~~-l~eg~~~~~~g~~qG~N~~  122 (207)
T 2evv_A           47 PKAFLNSNGLPTYSPKISWQKVEGAQSYALELIDHDAQKVC---GMPFVHWVVGNIAHNV-LEENASMMDKRIVQGVNSL  122 (207)
T ss_dssp             CGGGBCTTSCBCCCCCEEECCCTTCSEEEEEEEETTHHHHH---SSCEEEEEEEEECSSE-ECTTHHHHCSSSEECCCTT
T ss_pred             CCCcCCccCCCCccceEEEecCCCCeEEEEEEECCCCCCCC---CCcEEEEEEeCCCCCc-cccCcccCCCCceeccccc
Confidence            4455541  22345689998776689999999999999753   3589999999995331 11                 


Q ss_pred             ---cccee-------------eeeeCCCCcceeeeEEEEEEeecC-ccccCCCCCCCCCcchhhhhhhC
Q 030703          101 ---FGKEI-------------VSYETPKPVVGIHRYVFILFKQRG-RQTVRPPASRDHFNTRQFSAENG  152 (173)
Q Consensus       101 ---~g~~~-------------~~Y~~P~P~~G~HRYvflly~q~~-~~~~~~~~~R~~F~~~~F~~~~~  152 (173)
                         .|...             ..|.||+|+.|.|||+|+||+|+. .+.++     ..|...++.++..
T Consensus       123 ~~~~g~~~~~~~~k~~~~~~~~~Y~GP~PP~G~HRYvF~vyALd~~~L~l~-----~~~~~~~l~~am~  186 (207)
T 2evv_A          123 TQGFIRSPLNESEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALK-----APFFLGDLHDKMR  186 (207)
T ss_dssp             CSCSTTCSSCHHHHHHHHHHTCSCCCCCCSSSCEEEEEEEEEESSSCCCCC-----SSCCHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccCCCCCCCCcEEEEEEEEEecCccCCCC-----CCCCHHHHHHHhh
Confidence               12111             789999999999999999999998 77663     3455555555444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	173
d1qoua_	164	b.17.1.1 (A:) Centroradialis protein Cen {Garden s	2e-67
d1a44a_	185	b.17.1.1 (A:) Phosphatidylethanolamine binding pro	1e-53
d1wpxb1	219	b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor	8e-45
d1fjja_	159	b.17.1.2 (A:) Hypothetical protein YbhB {Escherich	8e-06
d1fuxa_	165	b.17.1.2 (A:) Hypothetical protein YbcL {Escherich	7e-05

>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]} Length = 164

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Centroradialis protein Cen
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

 Score =  200 bits (510), Expect = 2e-67
 Identities = 109/164 (66%), Positives = 129/164 (78%), Gaps = 6/164 (3%)

Query: 11  GRVVGDVVDTFIPSVKMNVIYNSN---KQVANGHELMPAVIIAKPRVDIGGEDMRSAYTL 67
           GRV+GDVVD F  +VKM+VIYNSN   K V NGHEL P+ + + PRV++ G DMRS +TL
Sbjct: 1   GRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMRSFFTL 60

Query: 68  IMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQ 127
           IMTDPD P PSDP LREHLHW+VTDIPGTTD+SFGKE+VSYE P+P +GIHR+VF+LFKQ
Sbjct: 61  IMTDPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVFLLFKQ 120

Query: 128 RGRQTV---RPPASRDHFNTRQFSAENGLGLPVAAVYFNAQRET 168
           + R       P   RD FNTR+F+ EN LGLPVAAV+FN QRET
Sbjct: 121 KKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQRET 164

>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]} Length = 185

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  166 bits (422), Expect = 1e-53
 Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 17/175 (9%)

Query: 1   MSRTTDPLAVGRVVGDVVDTFIPSVKMNVIYNSNKQVANGHELMPAVIIAKP-RVDIGGE 59
           +S+ + PL++  V         P   + V Y   +    G  L P  +  +P  +   G 
Sbjct: 4   LSKWSGPLSLQEV------DERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGL 57

Query: 60  DMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDASFGKEIVSYETP--KPVVGI 117
           D    YTL++TDPDAPS  DP  RE  H++V ++ G  + S G  +  Y         G+
Sbjct: 58  DPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG-NNISSGTVLSDYVGSGPPKGTGL 116

Query: 118 HRYVFILFKQRGRQTVRPPA-------SRDHFNTRQFSAENGLGLPVAAVYFNAQ 165
           HRYV+++++Q G      P         R  F    F  +  LG PVA   + A+
Sbjct: 117 HRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAE 171

>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 219

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Carboxypeptidase Y inhibitor
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  145 bits (366), Expect = 8e-45
 Identities = 48/210 (22%), Positives = 77/210 (36%), Gaps = 47/210 (22%)

Query: 4   TTDPLAVGRVVGDVVD--TFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGGEDM 61
           + D      ++ DV+   +F PS  + V Y+S+  VA G+ L      +KP+        
Sbjct: 11  SIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQ 70

Query: 62  RSA---------------YTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTT--------- 97
                             +TL+MTDPDAPS +D    E  H +  D+             
Sbjct: 71  MQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGA 130

Query: 98  --------DASFGKEIVSYETPKPVVGI--HRYVFILFKQRGRQTVRPPA---------- 137
                   +      ++ Y  P P  G   HRYVF+L+KQ         +          
Sbjct: 131 TEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGY 190

Query: 138 SRDHFNTRQFSAENGLGLPVAAVYFNAQRE 167
                   +++ EN L   VA+ +F A+ +
Sbjct: 191 GTPATGVGKWAKENNLQ-LVASNFFYAETK 219

>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]} Length = 159

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbhB
species: Escherichia coli [TaxId: 562]

 Score = 41.5 bits (97), Expect = 8e-06
 Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 31/115 (26%)

Query: 31  YNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMV 90
           +  N    +G  + P +                ++ +   DPDAP+ S        HW+V
Sbjct: 19  HVFNGMGYDGDNISPHLAWD------DVPAGTKSFVVTCYDPDAPTGSGWW-----HWVV 67

Query: 91  TDIPGTTDA-------------------SFGKEIVSYETPKPVVG-IHRYVFILF 125
            ++P  T                             Y+   P  G  HRY+F + 
Sbjct: 68  VNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVH 122

>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]} Length = 165

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbcL
species: Escherichia coli [TaxId: 562]

 Score = 38.9 bits (90), Expect = 7e-05
 Identities = 20/117 (17%), Positives = 34/117 (29%), Gaps = 33/117 (28%)

Query: 31  YNSNKQVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMV 90
           +  +     G    P++  +         +   ++ + + DPDAP+ S        HW V
Sbjct: 19  HVFSGFGCEGGNTSPSLTWSGV------PEGTKSFAVTVYDPDAPTGSGWW-----HWTV 67

Query: 91  TDIPGTT-----DASFGKEIVSYE-----------------TPKPVVGIHRYVFILF 125
            +IP T      DA                            P      H Y F ++
Sbjct: 68  VNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVW 124

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	173
d1qoua_	164	Centroradialis protein Cen {Garden snapdragon (Ant	100.0
d1wpxb1	219	Carboxypeptidase Y inhibitor {Baker's yeast (Sacch	100.0
d1a44a_	185	Phosphatidylethanolamine binding protein, PEBP {Co	100.0
d1fjja_	159	Hypothetical protein YbhB {Escherichia coli [TaxId	99.73
d1fuxa_	165	Hypothetical protein YbcL {Escherichia coli [TaxId	99.73

>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Centroradialis protein Cen
species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]

Probab=100.00  E-value=3.1e-51  Score=309.71  Aligned_cols=158  Identities=68%  Similarity=1.165  Sum_probs=142.8

Q ss_pred             eeeccccccccccceEEEEEEcCcc---cccccceeccceeccCCeeeeCCCCcceeEEEEEeCCCCCCCCCcchhceee
Q 030703           11 GRVVGDVVDTFIPSVKMNVIYNSNK---QVANGHELMPAVIIAKPRVDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLH   87 (173)
Q Consensus        11 ~~iipdvl~~f~P~~~L~V~y~~~~---~v~~G~~l~~~~t~~~P~v~~~~~~~~~~ytlvmvDpD~p~~~~~~~~~~lH   87 (173)
                      ++||||||+.|.|++.|+|.|+++.   .|.+|+.|++++++.+|+|++...+.+++|||+|+|||+|++.++++++|||
T Consensus         1 ~~vipdvld~F~P~~~l~V~y~~~~~~~~V~~G~~l~~~~t~~~P~v~~~~~~~~~~YtlvMvDpDap~~~~~~~~~~lH   80 (164)
T d1qoua_           1 GRVIGDVVDHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAVTSTPRVEVHGGDMRSFFTLIMTDPDVPGPSDPYLREHLH   80 (164)
T ss_dssp             CTTCTTTSCCCCCCSCEEEEECC---CEECCTTCBCCGGGSSSCCEEEECCCCTTCEEEEEEEECSCSCSSSCTTCCEEE
T ss_pred             CcCCCcccCCCCCCcEEEEEECCCccceEecCCCEeCHHHhccCCEEEEecCCCCceEEEEEECCCCCCCCCCccceEEE
Confidence            4799999999999999999999743   4889999999999999999999877789999999999999999999999999


Q ss_pred             eEeecCCCCCCCCccceeeeeeCCCCcceeeeEEEEEEeecCccccC---CCCCCCCCcchhhhhhhCCCCceeEEEecc
Q 030703           88 WMVTDIPGTTDASFGKEIVSYETPKPVVGIHRYVFILFKQRGRQTVR---PPASRDHFNTRQFSAENGLGLPVAAVYFNA  164 (173)
Q Consensus        88 wl~~ni~~~~~~~~g~~~~~Y~~P~P~~G~HRYvflly~q~~~~~~~---~~~~R~~F~~~~F~~~~~L~~pva~~~f~~  164 (173)
                      ||++||+.......|+.+++|.+|.|++|+|||+|+||+|+......   ....|.+||+++|++++||+.|||||||++
T Consensus        81 Wlv~nip~~~~~~~~~~~~~Y~~P~P~tG~HRYvflLf~Q~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva~n~F~~  160 (164)
T d1qoua_          81 WIVTDIPGTTDSSFGKEVVSYEMPRPNIGIHRFVFLLFKQKKRGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNC  160 (164)
T ss_dssp             EEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECSSCC-------CCCSBTCCHHHHHHHTTCCSCSEEEEEEE
T ss_pred             EEEecCCCCccccCCceecccCCCCCCCceeEEEEEEEEcCCCcccccCCCccccCCcCHHHHHHHhCCCCceeEEEEEe
Confidence            99999998766677889999999999999999999999999875432   356799999999999999999999999999


Q ss_pred             ccch
Q 030703          165 QRET  168 (173)
Q Consensus       165 ~~~~  168 (173)
                      |+++
T Consensus       161 q~~~  164 (164)
T d1qoua_         161 QRET  164 (164)
T ss_dssp             CCCC
T ss_pred             ecCC
Confidence            9985

>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Carboxypeptidase Y inhibitor
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1e-47  Score=302.53  Aligned_cols=163  Identities=29%  Similarity=0.426  Sum_probs=141.8

Q ss_pred             CCCceeeeeecccccc--ccccceEEEEEEcCcccccccceeccceeccCCeeeeCC---------------CCcceeEE
Q 030703            4 TTDPLAVGRVVGDVVD--TFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPRVDIGG---------------EDMRSAYT   66 (173)
Q Consensus         4 ~~~~l~~~~iipdvl~--~f~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~v~~~~---------------~~~~~~yt   66 (173)
                      .+++|++++|||||++  .|+|+..|+|.|+++..|.+|+.|++++++.+|+|+|..               .+.+++||
T Consensus        11 ~~~~~~~~~Iipdvl~~~~F~P~~~L~V~y~~~~~V~~G~~l~p~~t~~~P~i~~~~~~~~~~~~~~~~~~~~~~~~~yt   90 (219)
T d1wpxb1          11 SIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDLFT   90 (219)
T ss_dssp             HHHHHHHTTHHHHTSCCTTCCCSEEEEEEEETTEEECSSCBCCGGGGSSCCEEEEEEETTCC------CCCCCCSSCCEE
T ss_pred             HHHHHHhcCCCCccCCCCCCCCcEEEEEEECCCcCcCCCCEeCHHHhccCCEEEEecCccccccccccccccCCCCCeEE
Confidence            4678999999999998  599999999999987789999999999999999999953               13468999


Q ss_pred             EEEeCCCCCCCCCcchhceeeeEeecCCCCCC-----------------CCccceeeeeeCCCC--cceeeeEEEEEEee
Q 030703           67 LIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD-----------------ASFGKEIVSYETPKP--VVGIHRYVFILFKQ  127 (173)
Q Consensus        67 lvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~-----------------~~~g~~~~~Y~~P~P--~~G~HRYvflly~q  127 (173)
                      |||+|||+|+++++++++|||||++||+.+..                 ...|..+++|+||+|  ++|+|||+|+||+|
T Consensus        91 lvm~DPDaP~~~~~~~~~~~HWlv~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~gP~Pp~gtg~HRYvf~l~~Q  170 (219)
T d1wpxb1          91 LVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQ  170 (219)
T ss_dssp             EEEEESSSSCSSCCTTCSEEEEEEEEEEECC---------CCEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEEEC
T ss_pred             EEEECCCCCCCCCCCcceEEEEEEecCCccccccccccCccccCcccccccCCceeecccCCCCCCCCCceEEEEEEEEc
Confidence            99999999999999999999999999986531                 134678899999999  57799999999999


Q ss_pred             cCccccC---C-------CCCCCCCcchhhhhhhCCCCceeEEEeccccc
Q 030703          128 RGRQTVR---P-------PASRDHFNTRQFSAENGLGLPVAAVYFNAQRE  167 (173)
Q Consensus       128 ~~~~~~~---~-------~~~R~~F~~~~F~~~~~L~~pva~~~f~~~~~  167 (173)
                      +.++...   .       ...|.+||+++|++++||+ |||+|||++|++
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~R~~F~~~~F~~~~~L~-pVa~n~F~~q~~  219 (219)
T d1wpxb1         171 PKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQ-LVASNFFYAETK  219 (219)
T ss_dssp             CTTCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTCE-EEEEEEEEECCC
T ss_pred             cCCCCcccccccccccccccccCCCCHHHHHHHhCCE-EEEEEEEEEecC
Confidence            9876542   1       2469999999999999996 999999999974

>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein, PEBP {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Phosphatidylethanolamine binding protein
domain: Phosphatidylethanolamine binding protein, PEBP
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.5e-46  Score=287.32  Aligned_cols=150  Identities=31%  Similarity=0.552  Sum_probs=136.0

Q ss_pred             ccccceEEEEEEcCcccccccceeccceeccCCe-eeeCCCCcceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCC
Q 030703           20 TFIPSVKMNVIYNSNKQVANGHELMPAVIIAKPR-VDIGGEDMRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTD   98 (173)
Q Consensus        20 ~f~P~~~L~V~y~~~~~v~~G~~l~~~~t~~~P~-v~~~~~~~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~   98 (173)
                      .+.|+..|+|+|+++..+++|+.|++++++.+|+ +.|...+.+++|||+|+|||+|+++++++++|||||++||++. +
T Consensus        17 d~~P~~~L~V~y~~~~~v~~G~~l~p~~~~~~P~~v~~~~~~~~~~YtlvMvDPDaPs~~~~~~~e~lHWlv~Ni~~~-~   95 (185)
T d1a44a_          17 DERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPTSITWDGLDPGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKGN-N   95 (185)
T ss_dssp             SCCCSEECEEEETTEEECSTTEECCTTTTSSCCSEEECTTCCTTSEEEEEEEETTSSCSSSCTTCCEEEEEEEEEETT-C
T ss_pred             ccCCCceEEEEECCceecCCCCEECHHHHhcCCceEEecCCCCCCeEEEEEECCCCCCCCCCCcceEEEEEEeCCCCC-c
Confidence            5789999999999966678999999999999995 7888777789999999999999999999999999999999987 5


Q ss_pred             CCccceeeeeeCCCC--cceeeeEEEEEEeecCccccC-------CCCCCCCCcchhhhhhhCCCCceeEEEeccccchh
Q 030703           99 ASFGKEIVSYETPKP--VVGIHRYVFILFKQRGRQTVR-------PPASRDHFNTRQFSAENGLGLPVAAVYFNAQRETA  169 (173)
Q Consensus        99 ~~~g~~~~~Y~~P~P--~~G~HRYvflly~q~~~~~~~-------~~~~R~~F~~~~F~~~~~L~~pva~~~f~~~~~~~  169 (173)
                      ...|+.+++|+||.|  ++|.|||+|+||+|+.++.+.       ....|.+||+++|+++++|+.|||+|||+++||++
T Consensus        96 ~~~g~~l~~Y~~P~Pp~gtg~HRYvflLf~Q~~~~~~~~~~~~~~~~~~R~~f~~~~F~~~~~L~~Pva~nfF~~~~D~~  175 (185)
T d1a44a_          96 ISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWDDY  175 (185)
T ss_dssp             GGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCCCCBCTTCCTTCTTCCHHHHHHHTTCCSCSEEEEEEECCCTT
T ss_pred             CCCCeEeeeEecCcCCCCCCceEEEEEEEEccCCCCccccccCCCCccccCCCCHHHHHHHcCCCCCeEEEEEEEecCcH
Confidence            678999999999999  688999999999999876653       23579999999999999999999999999999986


Q ss_pred             h
Q 030703          170 A  170 (173)
Q Consensus       170 ~  170 (173)
                      -
T Consensus       176 V  176 (185)
T d1a44a_         176 V  176 (185)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbhB
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=3.5e-18  Score=126.90  Aligned_cols=112  Identities=24%  Similarity=0.379  Sum_probs=79.0

Q ss_pred             ccccccceeccceec---------cCCeeeeCCCC-cceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCCC-----
Q 030703           35 KQVANGHELMPAVII---------AKPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDA-----   99 (173)
Q Consensus        35 ~~v~~G~~l~~~~t~---------~~P~v~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~~-----   99 (173)
                      ..+..|..|+...+.         ..|.|+|.+.+ ..++|+|+|.|+|+|.+.     .|+||+++||++....     
T Consensus         7 ~~f~~g~~iP~~~t~~~~~~~G~n~SP~l~w~~~P~~tks~ali~~D~dap~~~-----~~~HW~~~nIp~~~~~l~~g~   81 (159)
T d1fjja_           7 NDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGS-----GWWHWVVVNLPADTRVLPQGF   81 (159)
T ss_dssp             SSCCTTSBCCGGGBCSSTTCCCCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT-----CEEEEEEEEEETTCCEECTTG
T ss_pred             CccCCcCCCCHHHhcCCCCCCCCccCceEEecCCCCCCeEEEEEEECCCCCCCC-----CceEEEEEccCCCcccccccc
Confidence            345667777777663         57999998764 479999999999998763     6999999999865321     


Q ss_pred             C-------cc-------ceeeeeeCCCCcce-eeeEEEEEEeec-CccccCCCCCCCCCcchhhhhhhCC
Q 030703          100 S-------FG-------KEIVSYETPKPVVG-IHRYVFILFKQR-GRQTVRPPASRDHFNTRQFSAENGL  153 (173)
Q Consensus       100 ~-------~g-------~~~~~Y~~P~P~~G-~HRYvflly~q~-~~~~~~~~~~R~~F~~~~F~~~~~L  153 (173)
                      .       .|       .....|.||||+.| .|||+|.||+++ +.+.+++...  .-++.+-++.+-|
T Consensus        82 ~~~~~~~~~g~~~g~n~~g~~~Y~gPcPP~g~~H~Y~f~vyALd~~~l~l~~~~~--~~~l~~ai~g~vl  149 (159)
T d1fjja_          82 GSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGAS--GAMVGFNVHFHSL  149 (159)
T ss_dssp             GGTSSCCCTTCEECBCTTSSBSCCCBCCSTTCCEEEEEEEEEESSSCCSCCTTCC--HHHHHHHHHHHEE
T ss_pred             cCccccCCCccEEecccCCCcceeCCCCcCCCcEEEEEEEEEecCccCCCCCCCC--HHHHHHHHhhCEE
Confidence            0       11       12356999999776 799999999998 4566642222  2244445555544

>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: PEBP-like
superfamily: PEBP-like
family: Prokaryotic PEBP-like proteins
domain: Hypothetical protein YbcL
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=2.2e-18  Score=128.68  Aligned_cols=112  Identities=20%  Similarity=0.345  Sum_probs=77.7

Q ss_pred             ccccccceecccee---------ccCCeeeeCCCC-cceeEEEEEeCCCCCCCCCcchhceeeeEeecCCCCCCC-----
Q 030703           35 KQVANGHELMPAVI---------IAKPRVDIGGED-MRSAYTLIMTDPDAPSPSDPCLREHLHWMVTDIPGTTDA-----   99 (173)
Q Consensus        35 ~~v~~G~~l~~~~t---------~~~P~v~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwl~~ni~~~~~~-----   99 (173)
                      ..+..|..|+...+         ...|.|+|++.+ .+++|+|+|+|+|+|...     .|+||+++||+++...     
T Consensus         7 ~~f~~g~~ip~~~~~~~~tc~G~n~SP~L~w~~~P~gtks~ali~~D~Dap~~~-----~~~HWlv~nIp~~~~~l~~~~   81 (165)
T d1fuxa_           7 NEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGS-----GWWHWTVVNIPATVTYLPVDA   81 (165)
T ss_dssp             SSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTTT-----CEEEEEEEEEETTCCEECTTT
T ss_pred             CCcCCcCCCCHhHhccCCCCCCCccCccEEecCCCCCCeEEEEEEeCCCCCCCC-----cceEEEEEccCccccccccCc
Confidence            45667777776532         258999998764 479999999999998764     6999999999865210     


Q ss_pred             --C----------c---cceeeeeeCCCCc--ceeeeEEEEEEeecC-ccccCCCCCCCCCcchhhhhhhCC
Q 030703          100 --S----------F---GKEIVSYETPKPV--VGIHRYVFILFKQRG-RQTVRPPASRDHFNTRQFSAENGL  153 (173)
Q Consensus       100 --~----------~---g~~~~~Y~~P~P~--~G~HRYvflly~q~~-~~~~~~~~~R~~F~~~~F~~~~~L  153 (173)
                        .          .   +.....|.||+|+  .|.|||+|.||+++. .+.+.  .....-++.+.++.+-|
T Consensus        82 ~~~~~~~~~~g~~~g~n~~g~~~Y~gP~PP~G~~~H~Y~f~vyAL~~~~l~l~--~~~~~~~l~~ai~g~vl  151 (165)
T d1fuxa_          82 GRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVD--SNSSGALVGYMLNANKI  151 (165)
T ss_dssp             TCTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCC--TTCCHHHHHHHHHTTEE
T ss_pred             CccccccCCCCeEEecccCCCcCCCCCCCcCCCCcEEEEEEEEEcCCccCCCC--CCCCHHHHHHHHhhCEE
Confidence              0          0   1133579999995  569999999999985 45553  22223345555554444