Citrus Sinensis ID: 030725

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170--
Protein Sequence
MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEEEEEEEEccccccEEEccccccccccccccEEEEEEEEcccccccHHHHHccccccccccccccccccccEEEEEccEEEEEEEcccccccccccccccccccEEEEEccHHHHHHHHHHcccEEEEccccccEEEEEcccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEEEccccccEEcccccEEEEcEcccccccccccEEEEEEEEEHHHHHHHHHHHccccccEccccccccccccccEEEEEcccEEEEEEcccccccccccccccccccEEEEEccHHHHHHHHHHccccEEEcccccEEEEEEcccccEEEEEEEcc
Coil and Loop (DISEMBL)
macvltpataipvrhqvnRLSVNFTLTytssqfyqtttvrkcrcngqflttkAKMSveggilkkepirdsdkigleinearphdklpyrgaWLWVGAEMIhlmelpnpdplsgrpehggrdrhtciaIRDVSKLKMILDKAGisytlsksgrpaiftrdpdanaleftqvdg
Flexible Loop (DISEMBL)
macvltpataipvrhqvnRLSVNFTLTYTSsqfyqtttvrkcrcngqflttkakmsveggilkkepirdsdkIGLEinearphdklpyRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIsytlsksgrpaiftrdpdanaleftqvdg
Low Complexity Region (SEG)
MACVLTPATAIPVRHQVNRLSVNFtltytssqfyqtttVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered region (IsUnstruct)
**CVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKK*******KIGLEINEARPHDKLPYRGAWLWVGAEMIHLMEL*****************HTCIAIRDVSKLKMILDKAGISYTLS************************
Disordered Region (DISOPRED)
*********AIPVRHQVNRLSVNFTLTYTSSQ**************QFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD*LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD*
Disordered Region (DISEMBL)
MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS********DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Disordered Region (DISPRO)
*****TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
225444850	205	PREDICTED: uncharacterized protein ywkD-	0.994	0.834	0.58	2e-56
297738629	199	unnamed protein product [Vitis vinifera]	0.994	0.859	0.58	2e-56
147789730	205	hypothetical protein VITISV_016330 [Viti	0.994	0.834	0.58	2e-56
388493084	200	unknown [Lotus japonicus]	0.988	0.85	0.575	6e-56
449489903	206	PREDICTED: uncharacterized LOC101203815	0.988	0.825	0.576	3e-54
224142861	199	predicted protein [Populus trichocarpa]	0.994	0.859	0.57	4e-54
255546079	158	conserved hypothetical protein [Ricinus	0.918	1.0	0.627	1e-53
359807103	206	uncharacterized protein LOC100805881 [Gl	0.994	0.830	0.552	8e-53
356547897	209	PREDICTED: uncharacterized protein LOC10	0.988	0.813	0.562	2e-52
15242020	197	Lactoylglutathione lyase / glyoxalase I	0.959	0.837	0.554	1e-51

>gi|225444850|ref|XP_002281014.1| PREDICTED: uncharacterized protein ywkD-like [Vitis vinifera]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/200 (58%), Positives = 132/200 (66%), Gaps = 29/200 (14%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA +L P    P++H+VNR S+N T++          TVR    +G  L T AKMSVEG 
Sbjct: 7   MASLLNPYPTSPLQHKVNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGD 65

Query: 61  ILKKEPIRDSDK----------------------------IGLEINEARPHDKLPYRGAW 92
           ++ KE I    K                            +G  +NEARP+DKLPYRGAW
Sbjct: 66  VMVKEAISTDQKNDIGIVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKLPYRGAW 125

Query: 93  LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR 152
           LWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YTLSKSGR
Sbjct: 126 LWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYTLSKSGR 185

Query: 153 PAIFTRDPDANALEFTQVDG 172
           PAIFTRDPDANALEF QVD 
Sbjct: 186 PAIFTRDPDANALEFVQVDA 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738629|emb|CBI27874.3| unnamed protein product [Vitis vinifera]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/200 (58%), Positives = 132/200 (66%), Gaps = 29/200 (14%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA +L P    P++H+VNR S+N T++          TVR    +G  L T AKMSVEG 
Sbjct: 1   MASLLNPYPTSPLQHKVNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGD 59

Query: 61  ILKKEPIRDSDK----------------------------IGLEINEARPHDKLPYRGAW 92
           ++ KE I    K                            +G  +NEARP+DKLPYRGAW
Sbjct: 60  VMVKEAISTDQKNDIGIVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKLPYRGAW 119

Query: 93  LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR 152
           LWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YTLSKSGR
Sbjct: 120 LWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYTLSKSGR 179

Query: 153 PAIFTRDPDANALEFTQVDG 172
           PAIFTRDPDANALEF QVD 
Sbjct: 180 PAIFTRDPDANALEFVQVDA 199

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147789730|emb|CAN63060.1| hypothetical protein VITISV_016330 [Vitis vinifera]

 Score =  223 bits (568), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/200 (58%), Positives = 132/200 (66%), Gaps = 29/200 (14%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA +L P    P++H+VNR S+N T++          TVR    +G  L T AKMSVEG 
Sbjct: 7   MASLLNPYPTSPLQHKVNRFSLN-TISRNLLSNRNQLTVRNGPTHGHRLITTAKMSVEGD 65

Query: 61  ILKKEPIRDSDK----------------------------IGLEINEARPHDKLPYRGAW 92
           ++ KE I    K                            +G  +NEARP+DKLPYRGAW
Sbjct: 66  VMVKEAISTDQKNDIGIVSLHHVGILCENLERSFDFYHNLLGFPVNEARPNDKLPYRGAW 125

Query: 93  LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR 152
           LWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVSKLK ILD+AGI YTLSKSGR
Sbjct: 126 LWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSKLKEILDEAGIPYTLSKSGR 185

Query: 153 PAIFTRDPDANALEFTQVDG 172
           PAIFTRDPDANALEF QVD 
Sbjct: 186 PAIFTRDPDANALEFVQVDA 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493084|gb|AFK34608.1| unknown [Lotus japonicus]

 Score =  221 bits (564), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 115/200 (57%), Positives = 139/200 (69%), Gaps = 30/200 (15%)

Query: 1   MACVL-TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEG 59
           MA +L  P+   P+  ++N +S +       S+FY  + V+  RC    ++ KA+++VEG
Sbjct: 1   MASLLRAPSFTSPLHQKLNYVSFSPLTMNLRSKFYHAS-VKNGRCYVPSMSIKAQVAVEG 59

Query: 60  GILKKE--PIRD--------------------------SDKIGLEINEARPHDKLPYRGA 91
            +L KE  PI +                           + +GLEINEARPHDKLPYRGA
Sbjct: 60  DVLDKESEPINEGSDYGVVSIHHVGILCENLERPLDFYQNVLGLEINEARPHDKLPYRGA 119

Query: 92  WLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG 151
           WLWVG+EMIHLMELPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK ILDKAGISYTLS+SG
Sbjct: 120 WLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAILDKAGISYTLSRSG 179

Query: 152 RPAIFTRDPDANALEFTQVD 171
           RPAIFTRDPDANALEFTQ+D
Sbjct: 180 RPAIFTRDPDANALEFTQID 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489903|ref|XP_004158454.1| PREDICTED: uncharacterized LOC101203815 [Cucumis sativus]

 Score =  216 bits (550), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/208 (57%), Positives = 140/208 (67%), Gaps = 38/208 (18%)

Query: 1   MACVL---TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRK---CRCNGQFLTTKAK 54
           MA +L   TP + I +R +VN    NF+   T+S F +   + +   C  +G   TT+AK
Sbjct: 1   MASLLSLSTPPSPINLRRKVNL--PNFSSISTNSSFKKHGKIERVGGCGYHGSCFTTRAK 58

Query: 55  MSVEGGILKK--EPIR---DSDK-------------------------IGLEINEARPHD 84
             +E  +L+K  EPI    ++D                          +GL+INEARPHD
Sbjct: 59  GGIEQDVLEKDKEPIEIDVENDYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHD 118

Query: 85  KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGIS 144
           KLPYRGAWLWVGAEMIHLMELPNPDPL+GRPEHGGRDRHTC+ IRDVSKLK ILDKAGI 
Sbjct: 119 KLPYRGAWLWVGAEMIHLMELPNPDPLTGRPEHGGRDRHTCLGIRDVSKLKAILDKAGIP 178

Query: 145 YTLSKSGRPAIFTRDPDANALEFTQVDG 172
           YTLSKSGRPAIFTRDPDANALEFTQVDG
Sbjct: 179 YTLSKSGRPAIFTRDPDANALEFTQVDG 206

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142861|ref|XP_002324754.1| predicted protein [Populus trichocarpa] gi|222866188|gb|EEF03319.1| predicted protein [Populus trichocarpa]

 Score =  216 bits (549), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 114/200 (57%), Positives = 133/200 (66%), Gaps = 29/200 (14%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA + +P+    ++H+VN  +       +   FYQT  V   R       TKAK+S E  
Sbjct: 1   MASLPSPSATAALQHKVNCATAKPISVNSLCHFYQTN-VGSGRSPRFCFKTKAKLSAETN 59

Query: 61  ILKKEPIRDSDKI----------------------------GLEINEARPHDKLPYRGAW 92
           I++KE    ++KI                            GLEINE RPHDKLPYRGAW
Sbjct: 60  IVEKESTCVNEKIDYGVVSVHHVGVLCDNLERSLEFYQGILGLEINEERPHDKLPYRGAW 119

Query: 93  LWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGR 152
           LWVG+EMIHLMELPNPDPL+GRPEHGGRDRHTCIAI+DVSKLK+ILDKAGI YTLS+SGR
Sbjct: 120 LWVGSEMIHLMELPNPDPLTGRPEHGGRDRHTCIAIQDVSKLKVILDKAGIPYTLSRSGR 179

Query: 153 PAIFTRDPDANALEFTQVDG 172
           PAIFTRDPDANALEF+QVDG
Sbjct: 180 PAIFTRDPDANALEFSQVDG 199

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546079|ref|XP_002514099.1| conserved hypothetical protein [Ricinus communis] gi|223546555|gb|EEF48053.1| conserved hypothetical protein [Ricinus communis]

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/172 (62%), Positives = 124/172 (72%), Gaps = 14/172 (8%)

Query: 1   MACVLTPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEGG 60
           MA ++TP+  I V+H+VN  S     T +   FY+   V   RC+     TKAK+S E  
Sbjct: 1   MASLVTPSAPIFVKHKVNLFSARPISTNSLFNFYKNV-VGSDRCHTLSFRTKAKLSAEAN 59

Query: 61  ILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR 120
           +++KE I  ++KIGLEINEARP DKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGR
Sbjct: 60  VIEKESISGNEKIGLEINEARPDDKLPYRGAWLWVGSEMIHLMELPNPDPLNGRPEHGGR 119

Query: 121 DRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVDG 172
           DRHTCIAIR             I YTLSKSGRPAIFTRDPDANALEFTQVD 
Sbjct: 120 DRHTCIAIR-------------IPYTLSKSGRPAIFTRDPDANALEFTQVDN 158

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807103|ref|NP_001241602.1| uncharacterized protein LOC100805881 [Glycine max] gi|255638057|gb|ACU19343.1| unknown [Glycine max]

 Score =  211 bits (537), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 111/201 (55%), Positives = 137/201 (68%), Gaps = 30/201 (14%)

Query: 1   MACVL-TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEG 59
           MA +L +P+   P+  ++N +S +   T   S+F + + VR  R +   LT K++ +VEG
Sbjct: 7   MASLLKSPSFLSPLNQKLNYVSFSPMTTNLQSKFCRAS-VRNGRWHVPSLTIKSQAAVEG 65

Query: 60  GILKKEPIRDSDK----------------------------IGLEINEARPHDKLPYRGA 91
            +L+KE +  +++                            +GL+INEARPHDKLPYRGA
Sbjct: 66  DVLEKESVSINEESDYGVVCMHHVGILCENLERSLEFYQNVLGLKINEARPHDKLPYRGA 125

Query: 92  WLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSG 151
           WLWVG+EMIHLMELPNPDPL+GR +HGGRDRHTCIAIRDVSKLK I DKAGI YTLS SG
Sbjct: 126 WLWVGSEMIHLMELPNPDPLTGRAQHGGRDRHTCIAIRDVSKLKAIFDKAGIPYTLSHSG 185

Query: 152 RPAIFTRDPDANALEFTQVDG 172
           RPAIF RDPDANALEFTQVDG
Sbjct: 186 RPAIFARDPDANALEFTQVDG 206

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547897|ref|XP_003542341.1| PREDICTED: uncharacterized protein LOC100788142 [Glycine max]

 Score =  209 bits (533), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 113/201 (56%), Positives = 134/201 (66%), Gaps = 31/201 (15%)

Query: 1   MACVL-TPATAIPVRHQVNRLSVNFTLTYTSSQFYQTTTVRKCRCNGQFLTTKAKMSVEG 59
           MA +L  P+   P+  ++N    +F+     S+FY  + VR  R N   +T KA+ +VEG
Sbjct: 9   MAFLLKAPSFLPPLNQKLNYTHKSFSPINLQSKFYHAS-VRNGRWNVPSMTIKAQAAVEG 67

Query: 60  GILKKEPI----RDSDK-------------------------IGLEINEARPHDKLPYRG 90
            +L  E       +SD                          +GL+INEARPH+KLPYRG
Sbjct: 68  DVLLDEESICVNEESDYGVVCMHHVGILCENLERSLDFYQNVLGLKINEARPHNKLPYRG 127

Query: 91  AWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS 150
           AWLWVG+EMIHLMELPNPDPL+GRP+HGGRDRHTCIAIRDVSKLK I DKAGI+YTLS S
Sbjct: 128 AWLWVGSEMIHLMELPNPDPLTGRPQHGGRDRHTCIAIRDVSKLKAIFDKAGIAYTLSHS 187

Query: 151 GRPAIFTRDPDANALEFTQVD 171
           GRPAIFTRDPDANALEFTQVD
Sbjct: 188 GRPAIFTRDPDANALEFTQVD 208

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242020|ref|NP_200514.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana] gi|8777444|dbj|BAA97034.1| unnamed protein product [Arabidopsis thaliana] gi|21594695|gb|AAM66034.1| unknown [Arabidopsis thaliana] gi|88193792|gb|ABD42985.1| At5g57040 [Arabidopsis thaliana] gi|110742698|dbj|BAE99260.1| hypothetical protein [Arabidopsis thaliana] gi|332009455|gb|AED96838.1| Lactoylglutathione lyase / glyoxalase I family protein [Arabidopsis thaliana]

 Score =  207 bits (526), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/202 (55%), Positives = 139/202 (68%), Gaps = 37/202 (18%)

Query: 1   MACVLTPATA-IPVRHQVNRLSVNFTLTYTSSQF-YQTTTVRKCRCNGQFLTTKAKM--- 55
           MA +  P++A + +R +V  +  N +   T  +F +Q  +VRK R N +F + KAK    
Sbjct: 1   MASIFRPSSASLDLRPKV--ICTNLS---TKERFEFQKKSVRKERINVRFYSLKAKAQGS 55

Query: 56  SVEG-GILKKEPIRD--------------------------SDKIGLEINEARPHDKLPY 88
           S+EG  +++++ + +                           + +GLEINEARPHDKLPY
Sbjct: 56  SIEGISVVQEKELNNKTDYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPY 115

Query: 89  RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS 148
           RGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVS LK ILDKAGI+YT+S
Sbjct: 116 RGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKAGIAYTMS 175

Query: 149 KSGRPAIFTRDPDANALEFTQV 170
           KSGRPAIFTRDPDANALEFTQV
Sbjct: 176 KSGRPAIFTRDPDANALEFTQV 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
TAIR|locus:2164600	197	AT5G57040 "AT5G57040" [Arabido	0.569	0.497	0.918	3.7e-50

TAIR|locus:2164600 AT5G57040 "AT5G57040" [Arabidopsis thaliana (taxid:3702)]

 Score = 494 (179.0 bits), Expect = 3.7e-50, Sum P(2) = 3.7e-50
 Identities = 90/98 (91%), Positives = 95/98 (96%)

Query:    73 IGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS 132
             +GLEINEARPHDKLPYRGAWLWVG+EMIHLMELPNPDPL+GRPEHGGRDRH CIAIRDVS
Sbjct:   100 LGLEINEARPHDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHACIAIRDVS 159

Query:   133 KLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV 170
              LK ILDKAGI+YT+SKSGRPAIFTRDPDANALEFTQV
Sbjct:   160 NLKEILDKAGIAYTMSKSGRPAIFTRDPDANALEFTQV 197

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00016519001 SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (199 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	172
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	7e-23
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	1e-05
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	4e-04

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 87.3 bits (217), Expect = 7e-23
 Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 73  IGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV 131
           +GLE     P     + GAWL+ G    +HL+E   PD L   PE  GRD H    + D+
Sbjct: 22  LGLEEGPRPPF---LFPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDDL 75

Query: 132 SKLKMILDKAGISYTLSKS---GRPAIFTRDPDANALEF 167
              +  L  AG+ YT S     G   +F RDPD N +E 
Sbjct: 76  DAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 13/106 (12%)

Query: 70  SDKIGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGR-PEHGGRDR-HTCI 126
            D +GLE        K   R A+ WVG   M+ L +        G  P HGG    H   
Sbjct: 19  EDVLGLE-----LMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAF 73

Query: 127 AIR--DVSKLKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEF 167
           AI   ++++ +  L+  G+   S      G  +++ RDPD N LE 
Sbjct: 74  AIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLEL 119

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 38.2 bits (89), Expect = 4e-04
 Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 5/101 (4%)

Query: 71  DKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 130
           D +G ++ E     + P R A+   G  ++ L+    P P +              ++ D
Sbjct: 21  DVLGFKLVEEVDDGEGPLRSAFFTAGGRVLELLLNETPPPAAAGFGGHHI-AFIAFSVDD 79

Query: 131 VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF 167
           V      L  AG+           G    + RDPD N +E 
Sbjct: 80  VDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLIEL 120

Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	172
PRK11478	129	putative lyase; Provisional	99.81
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.8
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.8
PRK10291	129	glyoxalase I; Provisional	99.79
PLN02367	233	lactoylglutathione lyase	99.79
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.78
PLN03042	185	Lactoylglutathione lyase; Provisional	99.78
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.78
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.78
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.78
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.77
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.77
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.76
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.76
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.76
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.76
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.76
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.75
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.75
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.75
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.74
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.74
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.74
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.74
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.74
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.74
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.73
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.73
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.73
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.73
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.72
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.72
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.72
PLN02300	286	lactoylglutathione lyase	99.71
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.71
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.71
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.71
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.71
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.71
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.71
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.71
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.7
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.7
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.7
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.69
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.69
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.69
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.69
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.69
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.69
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.68
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.68
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.68
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.68
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.68
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.68
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.68
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.68
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.67
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.67
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.66
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.66
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.66
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.66
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.66
PRK06724	128	hypothetical protein; Provisional	99.63
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.63
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.62
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.62
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.59
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.55
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.54
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.53
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.52
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.5
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.5
PLN02300	286	lactoylglutathione lyase	99.49
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.45
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.41
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.41
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.21
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.2
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.05
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.94
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.94
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	98.9
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.76
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.75
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.71
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.6
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.52
PRK10148	147	hypothetical protein; Provisional	98.35
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.22
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.2
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.17
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	97.94
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	97.01
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	96.99
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	96.9
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	96.68
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	96.65
PF15067	236	FAM124: FAM124 family	96.45
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	96.2
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	94.02
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	93.13
PF13670	83	PepSY_2: Peptidase propeptide and YPEB domain This	91.25
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	90.63
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	90.58
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	90.4
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	89.79
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	88.9
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	88.07
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	87.6
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	87.2
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	87.13
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	86.28
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	86.26
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	85.71
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	84.07
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	83.78
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	83.18
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	82.8
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	82.38

>PRK11478 putative lyase; Provisional

Probab=99.81  E-value=1.4e-18  Score=124.63  Aligned_cols=116  Identities=18%  Similarity=0.262  Sum_probs=81.4

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCC-CCcceEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDK-LPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~-g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.+.|+|++++++||+++|||++..+..... ..+. ..+.. ++..+++++.+.+......+. ..+..|+||.|+
T Consensus         7 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~~~~~~l~l~~~~~~~~~~~~~~-~~g~~hi~f~v~   84 (129)
T PRK11478          7 VHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWK-GDLALNGQYVIELFSFPFPPERPSRPE-ACGLRHLAFSVD   84 (129)
T ss_pred             ecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccce-eeEecCCCcEEEEEEecCCCCCCCCCC-CCceeEEEEEeC
Confidence            3689999999999999999999999864211000 1111 11233 344677766543221111112 234679999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          130 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      |+++++++|+++|+++...    .+|.+.+||+|||||.|||+|
T Consensus        85 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         85 DIDAAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             CHHHHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999998632    367788999999999999987

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=3.9e-18  Score=124.61  Aligned_cols=118  Identities=16%  Similarity=0.179  Sum_probs=82.7

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCC------CC-----cceEEEEe--CCeEEEEEecCCCCCCC---CCC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDK------LP-----YRGAWLWV--GAEMIHLMELPNPDPLS---GRP  115 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~------~~-----~~~~~~~~--g~~~l~L~~~~~~~~~~---~~p  115 (172)
                      ..|+.+.|+|++++++||++ |||+...+.....      .+     ....++..  |+..++|++...+....   ...
T Consensus         4 i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~~~~~~~~~~~~~~   82 (142)
T cd08353           4 MDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKFHHPAVIADHRPAP   82 (142)
T ss_pred             eeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEecCCCCcCcCCCCC
Confidence            46899999999999999998 9998754221000      00     11123332  34578887654322111   111


Q ss_pred             CCCCCcceEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          116 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       116 ~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ....+..|+||.|+|+++++++|+++|+++...    .++.+.+||+|||||.|||+|.
T Consensus        83 ~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          83 VNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence            223456899999999999999999999998743    3677889999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=2.4e-18  Score=122.05  Aligned_cols=115  Identities=17%  Similarity=0.174  Sum_probs=80.5

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~--  129 (172)
                      .|+.|.|+|++++++||+++|||+..........++...|+.++ +..++|++.+...+.. ......+..|+||.|+  
T Consensus         3 ~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~hi~f~v~~~   81 (125)
T cd07241           3 EHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSP-NEGERTGWAHLAFSVGSK   81 (125)
T ss_pred             eEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCc-ccCCCCceEEEEEECCCH
Confidence            57899999999999999999999975321111123344566664 3467887644221111 1112235689999996  


Q ss_pred             -CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEE
Q 030725          130 -DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       130 -dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~  168 (172)
                       |+++++++|+++|+++...    .+|.+.++|+|||||.|||.
T Consensus        82 ~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          82 EAVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEIT  125 (125)
T ss_pred             HHHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEeC
Confidence             4799999999999998742    35556678999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK10291 glyoxalase I; Provisional

Probab=99.79  E-value=1.9e-18  Score=124.67  Aligned_cols=110  Identities=19%  Similarity=0.250  Sum_probs=75.8

Q ss_pred             eecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 030725           57 VEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  132 (172)
Q Consensus        57 i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~----~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld  132 (172)
                      |.|+|++++++||+++|||+...+.......+..+|+..++.    .+++.... +   ......++..+|+||.|+|++
T Consensus         2 l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~---~~~~~~g~~~~hlaf~V~d~~   77 (129)
T PRK10291          2 LRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW-G---VDKYELGTAYGHIALSVDNAA   77 (129)
T ss_pred             EEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecC-C---CCCCcCCCCeeEEEEEeCCHH
Confidence            567899999999999999998653321122344556555432    23332211 1   111112345789999999999


Q ss_pred             HHHHHHHHCCCeEEec----CCC-ceEEEEECCCCCEEEEEee
Q 030725          133 KLKMILDKAGISYTLS----KSG-RPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       133 ~~~~~L~~~Gv~i~~~----~~g-~~~~y~~DPDGn~iEl~e~  170 (172)
                      +++++|+++|+++...    .++ .+.+||+|||||.|||++.
T Consensus        78 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~  120 (129)
T PRK10291         78 EACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE  120 (129)
T ss_pred             HHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            9999999999988632    244 3567899999999999985

>PLN02367 lactoylglutathione lyase

Probab=99.79  E-value=6.7e-18  Score=133.61  Aligned_cols=119  Identities=16%  Similarity=0.147  Sum_probs=83.1

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe------------------C-CeEEEEEecCCCCC--
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV------------------G-AEMIHLMELPNPDP--  110 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~------------------g-~~~l~L~~~~~~~~--  110 (172)
                      ..|.++.|+|+++|++||+++|||++..+.......+...|+..                  + +..|+|+...+.+.  
T Consensus        76 ~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~~  155 (233)
T PLN02367         76 MQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESDP  155 (233)
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCccc
Confidence            45789999999999999999999998753321122334444432                  1 23677765432221  


Q ss_pred             C-----CCCCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCEEEEEeec
Q 030725          111 L-----SGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       111 ~-----~~~p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~---~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      .     .+... ..+.+|+||.|+|+++++++|+++|+++...+   .+.+.+||+|||||.|||+|..
T Consensus       156 ~~~~y~~gn~~-p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~  223 (233)
T PLN02367        156 DFKGYHNGNSE-PRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLK  223 (233)
T ss_pred             cchhcccCCCC-CCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEecc
Confidence            0     01111 13578999999999999999999999997432   2245789999999999999863

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.78  E-value=4.5e-18  Score=124.20  Aligned_cols=117  Identities=12%  Similarity=-0.032  Sum_probs=82.7

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCC-CC-CCCCCCCcceEEEEECC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL-SG-RPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~-~~-~p~~~g~~~Hi~f~V~d  130 (172)
                      .|+.|.|+|++++++||+++|||+.......  ......++..|+..+.|......... .. ....+.+..|+||.|+|
T Consensus         2 ~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~--~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~D   79 (136)
T cd08342           2 DHVEFYVGNAKQLASWFSTKLGFEPVAYHGS--EDKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVDD   79 (136)
T ss_pred             eEEEEEeCCHHHHHHHHHHhcCCeEEEecCC--CceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeCC
Confidence            4788999999999999999999998753221  11122334445555665432211110 00 01123456899999999


Q ss_pred             HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          131 VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +++.+++|+++|+++..+    .+|.+.+||+|||||.|||+|..
T Consensus        80 vda~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~  124 (136)
T cd08342          80 AAAAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRK  124 (136)
T ss_pred             HHHHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecC
Confidence            999999999999999732    46778999999999999999964

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.78  E-value=1.3e-17  Score=128.59  Aligned_cols=121  Identities=15%  Similarity=0.108  Sum_probs=82.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe-------------------CCeEEEEEecCCCCC--
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV-------------------GAEMIHLMELPNPDP--  110 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~-------------------g~~~l~L~~~~~~~~--  110 (172)
                      ..|..|.|.|+++|++||+++|||++..+.......+...++..                   ++..|+|+.......  
T Consensus        28 ~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~~p  107 (185)
T PLN03042         28 MQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDP  107 (185)
T ss_pred             EEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcccc
Confidence            34678999999999999999999998754221112223333321                   223677765432111  


Q ss_pred             ----CCCCCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCEEEEEeecC
Q 030725          111 ----LSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVDG  172 (172)
Q Consensus       111 ----~~~~p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~---~g~~~~y~~DPDGn~iEl~e~~~  172 (172)
                          ....+....+..|+||.|+|+++++++|+++|+++...+   .+.+.+||+|||||.|||++..+
T Consensus       108 ~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        108 EFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             cccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECCC
Confidence                000011123578999999999999999999999987432   23456889999999999998653

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=6.2e-18  Score=117.01  Aligned_cols=109  Identities=36%  Similarity=0.638  Sum_probs=82.7

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~-~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      .|+.+.++|++++++||+++||++... ++.  ......|+..++. .+++...+.....   +...++..|++|.|+|+
T Consensus         2 ~Hi~l~v~d~~~~~~FY~~~lG~~~~~-~~~--~~~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~~~~~~~~~v~d~   75 (114)
T cd07245           2 DHVALRVPDLEASRAFYTDVLGLEEGP-RPP--FLFPGAWLYAGDGPQLHLIEEDPPDAL---PEGPGRDDHIAFRVDDL   75 (114)
T ss_pred             CeEEEecCCHHHHHHHHHHccCCcccC-cCC--CCCCceEEEeCCCcEEEEEecCCCccc---cCCCcccceEEEEeCCH
Confidence            478899999999999999999998864 221  1234578887665 6787655432211   12234467999999999


Q ss_pred             HHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEE
Q 030725          132 SKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEF  167 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl  167 (172)
                      ++++++++++|+++...   .++.+++|+.|||||.|||
T Consensus        76 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          76 DAFRARLKAAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            99999999999998743   2566789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.3e-17  Score=117.89  Aligned_cols=117  Identities=19%  Similarity=0.227  Sum_probs=80.8

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~-g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d  130 (172)
                      ..|+.+.|.|++++++||+++||++............-..++.. ++..++++..+........+. ..+.+|++|.|+|
T Consensus         4 ~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~-~~g~~h~~~~v~d   82 (125)
T cd08352           4 IHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYPE-ACGLRHLAFSVED   82 (125)
T ss_pred             cceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCCc-CCCceEEEEEeCC
Confidence            46889999999999999999999998653211111100112333 445677665432211111122 2356899999999


Q ss_pred             HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          131 VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      ++++.++|+++|+.+...    .+|.+.+|++||+||.|||+|
T Consensus        83 ~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          83 IEAAVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             HHHHHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            999999999999998642    456678999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.78  E-value=1.2e-17  Score=125.86  Aligned_cols=120  Identities=18%  Similarity=0.124  Sum_probs=83.1

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeee----cCC----CC----------CCcceEEEEeCC-eEEEEEecCCCCCCC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEA----RPH----DK----------LPYRGAWLWVGA-EMIHLMELPNPDPLS  112 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~----~~~----~~----------~~~~~~~~~~g~-~~l~L~~~~~~~~~~  112 (172)
                      ..|++|.|+|+++|++||+++|||+...+    .+.    +.          .....+++..++ ..++|++...+....
T Consensus         5 i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~~~~~~~   84 (162)
T TIGR03645         5 FSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFKNQENPE   84 (162)
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEeccCCCCCC
Confidence            46899999999999999999999987521    010    00          012234455443 468888776432221


Q ss_pred             CCC-CCCCCcceEEEEECCHHHHHHHHHHCCCeEEec------C--CCceEEEEECCCCCEEEEEeec
Q 030725          113 GRP-EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS------K--SGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       113 ~~p-~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~------~--~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ..+ ....+..|+||.|+|+++++++|+++|+.+...      .  .+.+.+||+|||||.|||++..
T Consensus        85 ~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        85 DNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             cccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            111 113457899999999999999999999876421      1  1247899999999999999863

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.77  E-value=6.3e-18  Score=120.63  Aligned_cols=117  Identities=15%  Similarity=0.262  Sum_probs=82.8

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCcceEEEEECC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~--~p~~~g~~~Hi~f~V~d  130 (172)
                      .|+.+.|+|++++++||+++||++...............++..++..++|+..........  .....++..|+||.|+|
T Consensus         3 ~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d   82 (128)
T TIGR03081         3 DHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEVDD   82 (128)
T ss_pred             CEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEcCC
Confidence            5788999999999999999999998642211112234456666777788865322111100  01113345799999999


Q ss_pred             HHHHHHHHHHCCCeEEec-----CCCceEEEE--ECCCCCEEEEEe
Q 030725          131 VSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQ  169 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~~-----~~g~~~~y~--~DPDGn~iEl~e  169 (172)
                      +++++++|+++|+++..+     .+|.+.+|+  +|||||.||+.|
T Consensus        83 i~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        83 IEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             HHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            999999999999998632     356677788  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1.4e-17  Score=118.56  Aligned_cols=112  Identities=11%  Similarity=-0.038  Sum_probs=74.3

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      .+++.+.|+|+++|.+||+++||+++..+.+     . ...+. ++..+++...............++...|++|.|+|+
T Consensus         3 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~-----~-~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~dv   75 (120)
T cd09011           3 FKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG-----E-NVTFE-GGFALQEGYSWLEGISKADIIEKSNNFELYFEEEDF   75 (120)
T ss_pred             EEEEEEEECCHHHHHHHHHHhcCCEEeeccC-----c-eEEEe-ccceeccchhhhccCCcccccccCCceEEEEEehhh
Confidence            3567889999999999999999999864211     1 11222 222232211100000001111223457999999999


Q ss_pred             HHHHHHHHHCCC-eEEe----cCCCceEEEEECCCCCEEEEEee
Q 030725          132 SKLKMILDKAGI-SYTL----SKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       132 d~~~~~L~~~Gv-~i~~----~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++++++|+++|+ ++..    ..+|.+.+||+|||||.|||.+.
T Consensus        76 d~~~~~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          76 DAFLDKLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             HHHHHHHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            999999999985 5652    25788999999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=6.1e-17  Score=115.27  Aligned_cols=114  Identities=18%  Similarity=0.123  Sum_probs=78.3

Q ss_pred             eeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHH
Q 030725           56 SVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  135 (172)
Q Consensus        56 ~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~~~  135 (172)
                      .+.++|++++++||+++||+++....+........+.+..++..+.+................+...|++|.|+|+++++
T Consensus         4 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~d~~~   83 (122)
T cd08355           4 TLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDVDAHY   83 (122)
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECCHHHHH
Confidence            45678999999999999999997533211111112345666665666433211110000011234579999999999999


Q ss_pred             HHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          136 MILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       136 ~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      ++|+++|+++..+    .+|.+.++|+|||||.|+|.+
T Consensus        84 ~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          84 ERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEec
Confidence            9999999998733    478888999999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.76  E-value=3.5e-17  Score=115.64  Aligned_cols=113  Identities=17%  Similarity=0.162  Sum_probs=79.5

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~----~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      .|+.+.++|++++.+||+++||++.....+.........|+..++    ..+++........   ....+.+..|++|.|
T Consensus         2 ~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~i~~~v   78 (121)
T cd07233           2 LHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEE---PYDNGNGFGHLAFAV   78 (121)
T ss_pred             eeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCC---CcCCCCCeEEEEEEe
Confidence            478899999999999999999999865322111223345555433    3455543221111   111123468999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEE
Q 030725          129 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~  168 (172)
                      +|+++++++|+++|+++...   ..+.+.+||+|||||+|||+
T Consensus        79 ~did~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          79 DDVYAACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             CCHHHHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            99999999999999998744   24567889999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.76  E-value=2.9e-17  Score=119.24  Aligned_cols=112  Identities=13%  Similarity=0.119  Sum_probs=80.1

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCC-CcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKL-PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~-~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ...|+.+.|+|+++|++||+++|||+...+...... .....|+..++..+.+.....       +. ..+.+|+||.|+
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~-------~~-~~~~~Hiaf~v~   75 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEGDS-------LQ-ERTYNHIAFKIS   75 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecCCC-------CC-CCCceEEEEEcC
Confidence            356899999999999999999999987643211001 111234555666666653221       11 124689999998


Q ss_pred             --CHHHHHHHHHHCCCeEEec---C-CCceEEEEECCCCCEEEEEee
Q 030725          130 --DVSKLKMILDKAGISYTLS---K-SGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 --dld~~~~~L~~~Gv~i~~~---~-~g~~~~y~~DPDGn~iEl~e~  170 (172)
                        |+++++++|+++|+++...   . ++.+++||+|||||.|||...
T Consensus        76 ~~~ld~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          76 DSDVDEYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             HHHHHHHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecC
Confidence              7999999999999998743   2 245799999999999999864

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.76  E-value=5.2e-17  Score=114.07  Aligned_cols=108  Identities=14%  Similarity=0.076  Sum_probs=79.9

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~-~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      +|+.+.|+|++++++||+++||++......   ......++..++ ..++++......     + ..+...|++|.|+|+
T Consensus         2 ~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~f~v~di   72 (114)
T cd07247           2 VWFELPTTDPERAKAFYGAVFGWTFEDMGD---GGGDYAVFSTGGGAVGGLMKAPEPA-----A-GSPPGWLVYFAVDDV   72 (114)
T ss_pred             EEEEeeCCCHHHHHHHHHhccCceeeeccC---CCCceEEEEeCCccEEEEecCCCCC-----C-CCCCeEEEEEEeCCH
Confidence            588999999999999999999999865321   112233455554 345555443221     1 123457999999999


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          132 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      ++++++|+++|+++..+    .++.+.+||+|||||.|||+|
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            99999999999998733    346688999999999999986

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.76  E-value=1.9e-17  Score=120.36  Aligned_cols=108  Identities=21%  Similarity=0.255  Sum_probs=80.6

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--C
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--D  130 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~--d  130 (172)
                      .|+.+.|+|++++++||+++||+++....+      ...++..++..+.+...+.. +   .....++.+|+||.|+  |
T Consensus         2 ~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~-~---~~~~~~~~~hiaf~v~~~d   71 (131)
T cd08363           2 NHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGGTWLALNEEPDI-P---RNEIRQSYTHIAFTIEDSE   71 (131)
T ss_pred             ceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCceEEEEEccCCC-C---cCCcCccceEEEEEecHHH
Confidence            478999999999999999999999864211      23456666666666443311 1   1111235689999998  4


Q ss_pred             HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          131 VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +++++++|+++|+++...    .++.+.+||+|||||.|||.+.
T Consensus        72 ld~~~~~l~~~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~  115 (131)
T cd08363          72 FDAFYTRLKEAGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTG  115 (131)
T ss_pred             HHHHHHHHHHcCCcccCCCccccCcceEEEEECCCCCEEEEecC
Confidence            999999999999998632    2466899999999999999875

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.75  E-value=4.5e-17  Score=119.29  Aligned_cols=109  Identities=17%  Similarity=0.179  Sum_probs=81.1

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~--  129 (172)
                      ..|+.+.|+|++++++||+++||+++... .     ...+|+..++..+.+...+..    ......++.+|++|.++  
T Consensus         5 i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~-~-----~~~~~~~~~g~~l~l~~~~~~----~~~~~~~~~~hiaf~v~~~   74 (139)
T PRK04101          5 INHICFSVSNLEKSIEFYEKVLGAKLLVK-G-----RKTAYFDLNGLWIALNEEKDI----PRNEIHQSYTHIAFSIEEE   74 (139)
T ss_pred             EEEEEEEecCHHHHHHHHHhccCCEEEee-c-----CeeEEEecCCeEEEeeccCCC----CCccCCCCeeEEEEEecHH
Confidence            46889999999999999999999998742 1     124566666666655332211    11111234579999998  


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          130 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+++++++|+++|+++...    .++.+++||+|||||.|||.+.
T Consensus        75 dv~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  119 (139)
T PRK04101         75 DFDHWYQRLKENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTG  119 (139)
T ss_pred             HHHHHHHHHHHCCceEcCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            9999999999999998632    3567899999999999999864

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=6.7e-17  Score=113.09  Aligned_cols=111  Identities=21%  Similarity=0.236  Sum_probs=78.1

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-----CeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-----AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-----~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      |+++.+.|++++++||+++|||++....+. ..  ...|+.++     +..+++...+.....  .+...++..|++|.|
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~-~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~v   75 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPM-GG--GFRWVTVAPPGSPETSLVLAPPANPAAM--SGLQPGGTPGLVLAT   75 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeecc-CC--CcEEEEEeCCCCCeeEEEEeCCCCcccc--ccccCCCceEEEEEe
Confidence            578899999999999999999998763221 11  22354442     224555433322111  112234567999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEe
Q 030725          129 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +|+++++++|+++|+++...   ..+.+.+|++|||||.|||+|
T Consensus        76 ~di~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          76 DDIDATYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             hHHHHHHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            99999999999999998743   334578999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.75  E-value=1.5e-16  Score=112.45  Aligned_cols=113  Identities=18%  Similarity=0.028  Sum_probs=79.8

Q ss_pred             eeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHH
Q 030725           55 MSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  134 (172)
Q Consensus        55 ~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~~  134 (172)
                      ..+.++|++++.+||+++||++................+..++..+.+........ . .....+...|++|.|+|++++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~-~-~~~~~~~~~~~~~~v~d~~~~   82 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHG-S-PASWGGTPVSLHLYVEDVDAT   82 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccC-C-CCCCCCceEEEEEEeCCHHHH
Confidence            34677899999999999999998753321111112234566776776654321111 0 101223457999999999999


Q ss_pred             HHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          135 KMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       135 ~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      ++++.++|+++..+    .+|.+.++++|||||.|||.+
T Consensus        83 ~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          83 FARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEec
Confidence            99999999998632    578889999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.74  E-value=6.8e-17  Score=119.34  Aligned_cols=109  Identities=15%  Similarity=0.143  Sum_probs=76.2

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCC-cceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~-~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d  130 (172)
                      ..|+.+.|+|++++.+||+++|||++.......... ..+.|+..+.. .|.+....      .+  .++.+|+||.|+|
T Consensus         7 l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~-~h~~~~~~------~~--~~~~~Hiaf~v~d   77 (143)
T cd07243           7 LDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK-PHDIAFVG------GP--DGKLHHFSFFLES   77 (143)
T ss_pred             eCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC-cceEEEec------CC--CCCceEEEEEcCC
Confidence            468999999999999999999999975432111111 12456654432 33332211      01  2356899999999


Q ss_pred             HHH---HHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEe
Q 030725          131 VSK---LKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       131 ld~---~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +++   +.++|+++|+++...     .++.+++||+|||||.|||+.
T Consensus        78 ~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~  124 (143)
T cd07243          78 WEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFA  124 (143)
T ss_pred             HHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEec
Confidence            887   568999999998632     134578999999999999965

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.74  E-value=7.8e-17  Score=114.96  Aligned_cols=104  Identities=19%  Similarity=0.205  Sum_probs=76.1

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~---  129 (172)
                      +++.+.|+|+++|++||+++|||+... ++    .....|+..++..+.+.-.+.+         ..+..|++|.++   
T Consensus         4 ~~v~l~v~Dl~~s~~FY~~~LG~~~~~-~~----~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~f~v~~~~   69 (120)
T cd07252           4 GYLGVESSDLDAWRRFATDVLGLQVGD-RP----EDGALYLRMDDRAWRIAVHPGE---------ADDLAYAGWEVADEA   69 (120)
T ss_pred             cEEEEEeCCHHHHHHHHHhccCceecc-CC----CCCeEEEEccCCceEEEEEeCC---------CCceeEEEEEECCHH
Confidence            578899999999999999999999864 21    1134677665443333222111         123579999997   


Q ss_pred             CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEee
Q 030725          130 DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+++++++|+++|+++...       ..+.+.+||+|||||.||++.-
T Consensus        70 dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          70 ALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             HHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence            4888999999999999742       2344789999999999999863

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=8.9e-17  Score=113.68  Aligned_cols=110  Identities=14%  Similarity=0.059  Sum_probs=76.4

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC--eEEEEEecCCCCCC-CCCCCCCCCcceEEEEEC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPL-SGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~--~~l~L~~~~~~~~~-~~~p~~~g~~~Hi~f~V~  129 (172)
                      .+..|.++|+++|++||+++|||+.....+      ....+..++  ..+.++........ ...+. .+...|++|.|+
T Consensus         3 ~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~-~~~~~~~~~~v~   75 (119)
T cd08359           3 LYPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDGGVELAFMLPGHETVPAAQYQF-QGQGLILNFEVD   75 (119)
T ss_pred             ceeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCCceEEEEccCCCCCCcchhccc-CCceEEEEEEEC
Confidence            356788899999999999999999875211      112233333  34555432211110 01111 233359999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          130 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      |+++++++|+++|+++...    .+|.+.++|+|||||.|||+|
T Consensus        76 did~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          76 DVDAEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CHHHHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            9999999999999987633    467789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1.3e-16  Score=112.77  Aligned_cols=113  Identities=15%  Similarity=0.226  Sum_probs=80.8

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC-H
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-V  131 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d-l  131 (172)
                      .|+.+.+.|++++++||+++||++.....+  .  ....++..++..+++.......... ......+..|++|.+++ +
T Consensus         5 ~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~--~--~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~hi~~~~~~~~   79 (125)
T cd07253           5 DHVVLTVADIEATLDFYTRVLGMEVVRFGE--E--VGRKALRFGSQKINLHPVGGEFEPA-AGSPGPGSDDLCLITEPPI   79 (125)
T ss_pred             ceEEEEecCHHHHHHHHHHHhCceeecccc--c--CCceEEEeCCEEEEEecCCCccCcC-ccCCCCCCceEEEEecccH
Confidence            578899999999999999999999875321  1  1234566666667765433221111 11122346899999975 9


Q ss_pred             HHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEee
Q 030725          132 SKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++++++|+++|+++...       .++.+++||+|||||.||+.+.
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  125 (125)
T cd07253          80 DELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSNY  125 (125)
T ss_pred             HHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeeeC
Confidence            99999999999988632       1235789999999999999873

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.74  E-value=7e-17  Score=121.25  Aligned_cols=111  Identities=16%  Similarity=0.207  Sum_probs=80.4

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC---CeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG---AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g---~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      .|+.|.|+|++++++||+++|||++....+     ....|+..+   +..++++..+...  ...+. .++..|+||.|+
T Consensus         3 ~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~-~~~l~Hiaf~v~   74 (157)
T cd08347           3 HGVTLTVRDPEATAAFLTDVLGFREVGEEG-----DRVRLEEGGGGPGAVVDVLEEPDQP--RGRPG-AGTVHHVAFRVP   74 (157)
T ss_pred             ccEEEEeCCHHHHHHHHHHhcCCEEEeeeC-----CEEEEEecCCCCCCEEEEEeCCCCC--CCccc-CCceEEEEEECC
Confidence            578999999999999999999999875321     123344443   3467776643111  11111 245689999999


Q ss_pred             C---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEeec
Q 030725          130 D---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       130 d---ld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      |   +++++++|+++|+.+...  ..+.+++||+|||||.|||++..
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            8   899999999999986532  33457899999999999999753

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.74  E-value=8.8e-17  Score=114.47  Aligned_cols=104  Identities=22%  Similarity=0.273  Sum_probs=77.4

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  133 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~  133 (172)
                      ...+.|+|+++|++||++ |||+.....+   .  .-.++..++..++|...+...     +.  ....|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~---~--~~~~~~~~~~~l~l~~~~~~~-----~~--~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQA---A--GYMILRRGDLELHFFAHPDLD-----PA--TSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCC---C--CEEEEEcCCEEEEEEecCcCC-----CC--CCcceEEEEeCCHHH
Confidence            457788999999999999 9999875322   1  223355566678886543111     11  123589999999999


Q ss_pred             HHHHHHHCCCeEE--------ec---CCCceEEEEECCCCCEEEEEee
Q 030725          134 LKMILDKAGISYT--------LS---KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       134 ~~~~L~~~Gv~i~--------~~---~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++++|+++|+++.        ..   .+|.+.+||+|||||.|||.|.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            9999999999742        11   3788899999999999999985

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.73  E-value=8.1e-17  Score=112.76  Aligned_cols=105  Identities=19%  Similarity=0.208  Sum_probs=77.1

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--CH
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--DV  131 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~--dl  131 (172)
                      |+.+.|+|++++++||+++||++.... .     ....|+..++..+.+...+..      +...+...|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~-~-----~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYS-S-----SKEAYFELAGLWICLMEEDSL------QGPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeec-c-----CceeEEEecCeEEEeccCCCc------CCCCCCccEEEEEcCHHHH
Confidence            577889999999999999999998642 1     124566666555554332211      011234589999994  79


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          132 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++++++|+++|+++...    .++.+.+|++|||||.|||..-
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCceEEEEECCCCCEEEEEeC
Confidence            99999999999998642    2356789999999999999863

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.73  E-value=2.4e-16  Score=113.28  Aligned_cols=106  Identities=17%  Similarity=0.228  Sum_probs=77.0

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      .-..++.+.|+|+++|.+||+++|||++..+ .    . ...|+..++....+. ....       .  ....|+||+|+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~-~----~-~~~~l~~~~~~~~i~-l~~~-------~--~~~~~iaf~v~   68 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAER-T----A-KATYFRSDARDHTLV-YIEG-------D--PAEQASGFELR   68 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccC-C----C-CeEEEEcCCccEEEE-EEeC-------C--CceEEEEEEEC
Confidence            3456899999999999999999999998642 1    1 246776654322221 1110       0  12479999997


Q ss_pred             C---HHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEeec
Q 030725          130 D---VSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       130 d---ld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      |   +++++++|+++|+++...       ..+.+.+||+|||||.||++..+
T Consensus        69 ~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          69 DDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            5   999999999999998642       24456789999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.73  E-value=1.1e-16  Score=118.69  Aligned_cols=118  Identities=21%  Similarity=0.220  Sum_probs=77.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~-~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d  130 (172)
                      ..|+.+.|.|++++++||+++|||+...........+...++..++. ....++........ ....+.+..|++|.|+|
T Consensus        18 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~g~~hi~f~v~d   96 (150)
T TIGR00068        18 LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTE-KYDLGNGFGHIAIGVDD   96 (150)
T ss_pred             EEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCC-cccCCCceeEEEEecCC
Confidence            45889999999999999999999998653221111122234443321 11112221110010 11112346799999999


Q ss_pred             HHHHHHHHHHCCCeEEec----C-CCceEEEEECCCCCEEEEEee
Q 030725          131 VSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~~----~-~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +++++++|.++|+++...    . .+.+.+||+|||||.|||++.
T Consensus        97 ld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  141 (150)
T TIGR00068        97 VYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQR  141 (150)
T ss_pred             HHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEC
Confidence            999999999999987632    2 334678999999999999985

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.73  E-value=2.2e-16  Score=111.46  Aligned_cols=103  Identities=17%  Similarity=0.083  Sum_probs=76.7

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      ..|+.+.|+|+++|++||++ |||+.... .   .  ...|+..++...+++.....        ..++..|++|.|+|.
T Consensus         4 l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~-~---~--~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~af~v~~~   68 (113)
T cd07267           4 IAHVRFEHPDLDKAERFLTD-FGLEVAAR-T---D--DELYYRGYGTDPFVYVARKG--------EKARFVGAAFEAASR   68 (113)
T ss_pred             EEEEEEccCCHHHHHHHHHH-cCCEEEEe-c---C--CeEEEecCCCccEEEEcccC--------CcCcccEEEEEECCH
Confidence            46789999999999999999 99988642 2   1  34677654333333322210        113467999999999


Q ss_pred             HHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEe
Q 030725          132 SKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +++.+.+++.|+.+...   +++.+.+||+|||||.|||+.
T Consensus        69 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~  109 (113)
T cd07267          69 ADLEKAAALPGASVIDDLEAPGGGKRVTLTDPDGFPVELVY  109 (113)
T ss_pred             HHHHHHHHcCCCeeecCCCCCCCceEEEEECCCCCEEEEEe
Confidence            99999999999987632   466789999999999999975

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.72  E-value=2.6e-16  Score=109.61  Aligned_cols=105  Identities=25%  Similarity=0.311  Sum_probs=77.6

Q ss_pred             eeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHHH
Q 030725           56 SVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK  135 (172)
Q Consensus        56 ~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~~~  135 (172)
                      .+.|+|++++++||+++|||+.....+    .....++..++..++|........    + ......|++|.++|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP----EPGYAFLSRGGAQLMLSEHDGDEP----V-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC----CCcEEEEEeCCEEEEEeccCCCCC----C-CCCCcEEEEEEeCCHHHHH
Confidence            467899999999999999999875321    112344556666777765442211    0 1223469999999999999


Q ss_pred             HHHHHCCCe-EEec----CCCceEEEEECCCCCEEEEEe
Q 030725          136 MILDKAGIS-YTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       136 ~~L~~~Gv~-i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      ++|+++|+. +...    .+|.+.+||+|||||.|||+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            999999998 4322    467789999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=2.7e-16  Score=111.81  Aligned_cols=114  Identities=13%  Similarity=0.043  Sum_probs=77.0

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecC--CC-CCCC---CCCCCCCCcceEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP--NP-DPLS---GRPEHGGRDRHTCI  126 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~--~~-~~~~---~~p~~~g~~~Hi~f  126 (172)
                      .++.+.|+|++++.+||+++|||+.....+  ...+  ..+..++..+.+....  .. .+..   ..+...+...|++|
T Consensus         2 ~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (125)
T cd07264           2 GYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDY--GELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIAF   77 (125)
T ss_pred             ceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcE--EEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEEE
Confidence            367888999999999999999999864222  1111  1123344444443221  00 0000   11111223469999


Q ss_pred             EECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+|+++++++++++|+++..+    .+|.+.++|+|||||.||+.++
T Consensus        78 ~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          78 VTDDVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EcCCHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            9999999999999999988632    5777889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.72  E-value=2.8e-16  Score=111.32  Aligned_cols=114  Identities=17%  Similarity=0.233  Sum_probs=78.7

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCC-CcceEEEEe----CCeEEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKL-PYRGAWLWV----GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~-~~~~~~~~~----g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      .|+.+.|.|++++++||+++|||+.....+.... .....++..    ++..++|+..+.....  .....++..|+||.
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~--~~~~~~~~~hi~f~   80 (126)
T cd08346           3 HHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPK--GRRGPGQIHHIAFS   80 (126)
T ss_pred             ccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCC--CCCCCCcEEEEEEE
Confidence            4788999999999999999999998754321010 111223332    2335777665432210  11122346899999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEE
Q 030725          128 IR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       128 V~---dld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~  168 (172)
                      |+   ++++++++++++|+++...  ..+.+.+||+|||||.|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEeC
Confidence            98   4699999999999988632  45678999999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PLN02300 lactoylglutathione lyase

Probab=99.71  E-value=2.2e-16  Score=128.91  Aligned_cols=125  Identities=21%  Similarity=0.203  Sum_probs=85.7

Q ss_pred             cccCCceeeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe----EEEEEecCCCCCCCCCCCC
Q 030725           42 CRCNGQFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEH  117 (172)
Q Consensus        42 ~~~~~~~l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~----~l~L~~~~~~~~~~~~p~~  117 (172)
                      .+|--..+....|+.|.|+|++++++||+++|||+...........+...|+..++.    .+.+......    .....
T Consensus        15 ~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~----~~~~~   90 (286)
T PLN02300         15 LEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGV----DKYDI   90 (286)
T ss_pred             hcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCC----Ccccc
Confidence            345323455567899999999999999999999998653221122334566665532    2333221111    11112


Q ss_pred             CCCcceEEEEECCHHHHHHHHHHCCCeEEec----CC-CceEEEEECCCCCEEEEEee
Q 030725          118 GGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KS-GRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       118 ~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~----~~-g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +.+..|+||.|+|+++++++|+++|+++...    .+ +.+.+||+|||||.|||+++
T Consensus        91 ~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  148 (286)
T PLN02300         91 GTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQR  148 (286)
T ss_pred             CCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeC
Confidence            3456899999999999999999999988633    22 34678999999999999986

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.71  E-value=1e-16  Score=119.59  Aligned_cols=109  Identities=14%  Similarity=0.090  Sum_probs=75.3

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCC-CCCcceEEEEeCCe--EE--EEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHD-KLPYRGAWLWVGAE--MI--HLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~g~~--~l--~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      .|+.|.|+|+++|++||+++|||++....... .......|+..++.  .+  +-+...      ..+  .++.+|+||.
T Consensus         3 ~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~------~~~--~~g~~Hiaf~   74 (153)
T cd07257           3 GHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALA------QGP--ESGVHHAAFE   74 (153)
T ss_pred             cEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHh------cCC--CCceeEEEEE
Confidence            57999999999999999999999986421100 11223566665421  11  111111      011  2457899999


Q ss_pred             ECCHHHHH---HHHHHCCCeEEecC-----CCceEEEEECCCCCEEEEEe
Q 030725          128 IRDVSKLK---MILDKAGISYTLSK-----SGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       128 V~dld~~~---~~L~~~Gv~i~~~~-----~g~~~~y~~DPDGn~iEl~e  169 (172)
                      |+|++++.   ++|+++|+++....     .....+||+|||||.|||+.
T Consensus        75 v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~  124 (153)
T cd07257          75 VHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYT  124 (153)
T ss_pred             cCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEc
Confidence            99999986   99999999987431     22446799999999999985

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.71  E-value=4.9e-16  Score=110.70  Aligned_cols=106  Identities=11%  Similarity=0.076  Sum_probs=75.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-C-eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-A-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~-~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.+.|+|+++|++||+++|||+.....+     ....|+... + ....+. ...        ....+..|+||.|+
T Consensus         5 l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~-l~~--------~~~~~~~hiaf~v~   70 (122)
T cd07265           5 PGHVQLRVLDLEEAIKHYREVLGLDEVGRDD-----QGRVYLKAWDEFDHHSIV-LRE--------ADTAGLDFMGFKVL   70 (122)
T ss_pred             EeEEEEEeCCHHHHHHHHHhccCCEeeeecC-----CceEEEEccCCCcccEEE-ecc--------CCCCCeeEEEEEeC
Confidence            4578999999999999999999999865321     123455442 1 111221 110        01124579999997


Q ss_pred             ---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEeec
Q 030725          130 ---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       130 ---dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                         |+++++++|+++|+++...     ....+.+||+|||||.|||.+..
T Consensus        71 ~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          71 DDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence               7889999999999998632     23346899999999999998753

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.71  E-value=3.9e-16  Score=108.31  Aligned_cols=100  Identities=25%  Similarity=0.414  Sum_probs=71.3

Q ss_pred             eecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 030725           57 VEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  132 (172)
Q Consensus        57 i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~----~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld  132 (172)
                      |.|+|++++++||+++|||++....+      ....+..+..    ...+...+..      +....+..|++|.|+|++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~v~dv~   68 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFPDP------PGPPGGGFHLCFEVEDVD   68 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEESS------SSSSSSEEEEEEEESHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCCcc------ccCCCceeEEEEEEcCHH
Confidence            56899999999999999999986322      2234444321    2233333211      112345689999999999


Q ss_pred             HHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEE
Q 030725          133 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       133 ~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~  168 (172)
                      +++++|+++|+++...    .+|.+.++|.|||||.|||+
T Consensus        69 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   69 ALYERLKELGAEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHHHHHTTSEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHCCCeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            9999999999997532    57889999999999999986

...

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.71  E-value=4.7e-16  Score=111.28  Aligned_cols=103  Identities=14%  Similarity=0.161  Sum_probs=76.0

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~-~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~--  129 (172)
                      .|+.+.|+|+++|++||+++||++....     .+ ...++..++ ..+.+...+         . .....|++|.++  
T Consensus         6 ~hv~l~v~Dl~~s~~FY~~~lG~~~~~~-----~~-~~~~~~~~~~~~l~~~~~~---------~-~~~~~h~a~~v~~~   69 (123)
T cd08351           6 NHTIVPARDREASAEFYAEILGLPWAKP-----FG-PFAVVKLDNGVSLDFAQPD---------G-EIPPQHYAFLVSEE   69 (123)
T ss_pred             eEEEEEcCCHHHHHHHHHHhcCCEeeec-----cC-CEEEEEcCCCcEEEEecCC---------C-CCCcceEEEEeCHH
Confidence            5789999999999999999999998642     11 123344432 345443321         1 122479999887  


Q ss_pred             CHHHHHHHHHHCCCeEEec-----------CCCceEEEEECCCCCEEEEEeec
Q 030725          130 DVSKLKMILDKAGISYTLS-----------KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~-----------~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      |+++++++|+++|+++...           .+|.+.+||+|||||.|||++.+
T Consensus        70 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          70 EFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             HHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence            6999999999999998521           36778999999999999999864

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=6.3e-16  Score=110.07  Aligned_cols=109  Identities=22%  Similarity=0.235  Sum_probs=77.7

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC-
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~--~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~-  129 (172)
                      .|+.+.|+|++++++||+++|||++... .     ....++..++  ..+.+...+...   .......+..|++|.|+ 
T Consensus         4 ~hi~l~v~d~~~~~~Fy~~~lG~~~~~~-~-----~~~~~l~~~~~~~~l~l~~~~~~~---~~~~~~~~~~hi~f~v~~   74 (125)
T cd07255           4 GAVTLRVADLERSLAFYQDVLGLEVLER-T-----DSTAVLGTGGKRPLLVLEEDPDAP---PAPPGATGLYHFAILLPS   74 (125)
T ss_pred             EEEEEEECCHHHHHHHHHhccCcEEEEc-C-----CCEEEEecCCCeEEEEEEeCCCCC---cccCCCCcEEEEEEECCC
Confidence            5789999999999999999999999753 1     1245666554  234443332211   01112234679999997 


Q ss_pred             --CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEee
Q 030725          130 --DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 --dld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                        ++++++++|+++|+++...  ....+++||+|||||+|||...
T Consensus        75 ~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~  119 (125)
T cd07255          75 RADLAAALRRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYAD  119 (125)
T ss_pred             HHHHHHHHHHHHHcCCceeccccccceeEEEEECCCCCEEEEEEe
Confidence              4889999999999988633  2334689999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.71  E-value=3.3e-16  Score=111.75  Aligned_cols=105  Identities=21%  Similarity=0.252  Sum_probs=77.0

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE--CC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--RD  130 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V--~d  130 (172)
                      .|+.+.|+|++++.+||+++||++.....+      ...|+..++..+.+...+..     .  ..+...|+||.+  +|
T Consensus         3 ~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~-----~--~~~~~~hi~f~v~~~d   69 (121)
T cd07244           3 NHITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGDLWLCLSVDANV-----G--PAKDYTHYAFSVSEED   69 (121)
T ss_pred             ceEEEEECCHHHHHHHHHHhcCCEEEEecC------CceEEecCCEEEEEecCCCC-----C--CCCCeeeEEEEeCHHH
Confidence            468889999999999999999999865322      23566666555444221111     1  123457999998  47


Q ss_pred             HHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCEEEEEee
Q 030725          131 VSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~~-~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +++++++|+++|+++... ....+.+||+|||||.|||+..
T Consensus        70 l~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~~  110 (121)
T cd07244          70 FASLKEKLRQAGVKEWKENTSEGDSFYFLDPDGHKLELHVG  110 (121)
T ss_pred             HHHHHHHHHHcCCcccCCCCCCccEEEEECCCCCEEEEEeC
Confidence            999999999999988643 2234689999999999999863

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=3.3e-16  Score=110.94  Aligned_cols=100  Identities=11%  Similarity=0.098  Sum_probs=74.5

Q ss_pred             eeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHH
Q 030725           55 MSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  134 (172)
Q Consensus        55 ~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~~  134 (172)
                      ..++++|++++++||++ |||+.....+      ..+++..++..+.|......       . .....|++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~~~l~l~~~~~~-------~-~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGNCAFYLQDYYVK-------D-WAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCCEEEEeecCCCc-------c-cccCCEEEEEECCHHHH
Confidence            35678999999999987 9999975321      24567777766665332111       0 11235899999999999


Q ss_pred             HHHHHHCCCeEE---------ecCCCceEEEEECCCCCEEEEEe
Q 030725          135 KMILDKAGISYT---------LSKSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       135 ~~~L~~~Gv~i~---------~~~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +++|+++|+++.         ...+|.+.++|+|||||.|+|.|
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            999999998742         12578899999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=6.7e-16  Score=108.29  Aligned_cols=101  Identities=15%  Similarity=0.057  Sum_probs=73.4

Q ss_pred             eeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC---eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           55 MSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        55 ~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~---~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      ..+.|+|++++++||+++|||+.... .    + ...++..++   ..+.+.....        . .....|++|.|+|+
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~-~----~-~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~i~~~v~d~   68 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMD-H----G-WIATFASPQNMTVQVSLATEGG--------T-ATVVPDLSIEVDDV   68 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEc-C----C-ceEEEeecCCCCcEEEEecCCC--------C-CCCCCEEEEEeCCH
Confidence            46778999999999999999998642 1    1 122333322   2344432211        0 11246999999999


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          132 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++++++|+++|+++...    .+|.+.+||.|||||.|||+++
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          69 DAALARAVAAGFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHHHhcCCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            99999999999998643    4677889999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=3.7e-16  Score=111.73  Aligned_cols=112  Identities=13%  Similarity=-0.005  Sum_probs=74.9

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-CeEEEEEecCCCCC--CCCCC-CCCCCcceEEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP--LSGRP-EHGGRDRHTCIAI  128 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~~~l~L~~~~~~~~--~~~~p-~~~g~~~Hi~f~V  128 (172)
                      ..+.+.|+|+++|++||++ |||+.....+    .....++..+ +..+.|...+....  ....+ ...+...|++|.|
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~----~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v   76 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFS----DEKAACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSA   76 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccC----CCCeEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeC
Confidence            4578899999999999986 8998753211    1123455555 34566654321100  00000 1123346999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEe
Q 030725          129 R---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       129 ~---dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +   ++++++++++++|+++..+   ..+.+.+||+|||||.|||+.
T Consensus        77 ~~~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          77 DSREEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             CCHHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence            8   5788999999999998743   234467899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.70  E-value=5e-16  Score=112.97  Aligned_cols=105  Identities=15%  Similarity=0.213  Sum_probs=75.9

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC--e--EEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA--E--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~--~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      ..|+.+.|+|+++|++||+++||+++....+     ....|+..++  .  .+.+...+         ....+.+|+||.
T Consensus         4 l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~-----~~~~~~~~~~~~~~~~i~l~~~~---------~~~~g~~hiaf~   69 (134)
T cd08360           4 LGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK-----GRGAFLRAAGGGDHHNLFLIKTP---------APMAGFHHAAFE   69 (134)
T ss_pred             eeEEEEEcCCHHHHHHHHHHhcCCEEEEEec-----CcEEEEECCCCCCCcEEEEecCC---------CCCCcceEEEEE
Confidence            4678999999999999999999999864221     1356776642  1  33333221         112457899999


Q ss_pred             ECCHHHHH---HHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          128 IRDVSKLK---MILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~dld~~~---~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+|++++.   ++|+++|+++...     ..+...+||+|||||.|||...
T Consensus        70 v~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~  120 (134)
T cd08360          70 VGDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGAD  120 (134)
T ss_pred             eCCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcc
Confidence            99988776   5999999987632     1334568999999999999853

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.69  E-value=5.3e-16  Score=110.46  Aligned_cols=107  Identities=15%  Similarity=0.114  Sum_probs=75.8

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~-~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      +-..|+.+.|+|++++++||+++|||++....+      ...|+..++ ...+.+.....       . ..+.+|+||.|
T Consensus         5 ~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~-~~~~~h~af~v   70 (121)
T cd09013           5 AHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------P-EAGLGHIAWRA   70 (121)
T ss_pred             cEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------C-CCceEEEEEEc
Confidence            334689999999999999999999999875311      234565432 12222222100       0 12468999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEee
Q 030725          129 R---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~---dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +   +++++.++|+++|+++...   ..+..++||+|||||.||++..
T Consensus        71 ~~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          71 SSPEALERRVAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             CCHHHHHHHHHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEe
Confidence            7   5788999999999987532   3445689999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.69  E-value=9.9e-16  Score=107.56  Aligned_cols=103  Identities=17%  Similarity=0.153  Sum_probs=77.6

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~--  129 (172)
                      .|+.+.++|++++++||+++||+++....      ...+|+..+ +..+.+.....+         ..+..|++|.|+  
T Consensus         4 ~hv~l~v~d~~~~~~FY~~~lg~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~h~~~~v~~~   68 (117)
T cd07240           4 AYAELEVPDLERALEFYTDVLGLTVLDRD------AGSVYLRCSEDDHHSLVLTEGD---------EPGVDALGFEVASE   68 (117)
T ss_pred             eEEEEecCCHHHHHHHHHhccCcEEEeec------CCeEEEecCCCCcEEEEEEeCC---------CCCceeEEEEcCCH
Confidence            47889999999999999999999987532      134677776 333333221110         124589999997  


Q ss_pred             -CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          130 -DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 -dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                       +++++.++|+++|+++...    .++.+.+||+|||||.+|++..
T Consensus        69 ~~v~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          69 EDLEALAAHLEAAGVAPEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             HHHHHHHHHHHHcCCceEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence             6888999999999998643    4566899999999999999864

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.3e-15  Score=108.94  Aligned_cols=112  Identities=18%  Similarity=0.156  Sum_probs=80.6

Q ss_pred             EeeeeecCChHHHHHHhHhcc---CCEEeeecCCCCCCcceEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKI---GLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vL---G~~~~~~~~~~~~~~~~~~~~~-g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      .|+.+.++|++++++||+++|   ||+.....+     ....|+.. ++..+.++........... ....+..|+||.|
T Consensus         3 ~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~-----~~~~~~~~~~~~~i~l~~~~~~~~~~~~-~~~~g~~hia~~v   76 (128)
T cd07242           3 HHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE-----DGRSWRAGDGGTYLVLQQADGESAGRHD-RRNPGLHHLAFRA   76 (128)
T ss_pred             ceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec-----cCceEEecCCceEEEEEecccCCCcccc-cCCcCeeEEEEEc
Confidence            478889999999999999999   999875321     12345554 5566777654432211011 1123457999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEee
Q 030725          129 R---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~---dld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +   |+++++++|+++|+++...       ..+.+.+||+|||||.|||+.+
T Consensus        77 ~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          77 PSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            7   4889999999999998742       2356789999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.69  E-value=9e-16  Score=109.07  Aligned_cols=111  Identities=14%  Similarity=0.096  Sum_probs=74.2

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-CeEEEEEecCCCCC-CCCCCCCCCCcceEEEEEC-
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDP-LSGRPEHGGRDRHTCIAIR-  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~~~l~L~~~~~~~~-~~~~p~~~g~~~Hi~f~V~-  129 (172)
                      .++++.|+|+++|++||+. |||+.....    .....+++..+ +..+.|........ ....+...++..|++|.++ 
T Consensus         2 ~~i~l~V~D~~~a~~FY~~-LGf~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   76 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRR-LGFDFPEEA----DDEPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCET   76 (122)
T ss_pred             ceEEEEeccHHHHHHHHHH-hCceecCCc----CCCCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcCC
Confidence            4688999999999999975 999985421    11123345554 44454432211100 0011111233468999875 


Q ss_pred             --CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEE
Q 030725          130 --DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       130 --dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~  168 (172)
                        |+++++++|+++|+++...    .+|.+.++|+|||||.|||+
T Consensus        77 ~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          77 PAEVDALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             HHHHHHHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence              8999999999999987632    47778899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.5e-15  Score=107.41  Aligned_cols=112  Identities=24%  Similarity=0.374  Sum_probs=78.7

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC-eEEEEEecCCCCC-CC-CCCCCCCCcceEEEEE--
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDP-LS-GRPEHGGRDRHTCIAI--  128 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~-~~l~L~~~~~~~~-~~-~~p~~~g~~~Hi~f~V--  128 (172)
                      ++++.|.|++++++||+++|||++... +.    ...+++..++ ..+.++....... .. ..+....+..|++|.+  
T Consensus         3 ~~~l~v~d~~~s~~Fy~~~lG~~~~~~-~~----~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~   77 (122)
T cd08354           3 ETALYVDDLEAAEAFYEDVLGLELMLK-ED----RRLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAIPA   77 (122)
T ss_pred             EEEEEeCCHHHHHHHHHhccCCEEeec-CC----CceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEcCH
Confidence            567888999999999999999998752 21    1235666665 3455544321110 00 0111123457999998  


Q ss_pred             CCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEee
Q 030725          129 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +|++++++++.++|+++...   .++.+.+||+|||||.||+++.
T Consensus        78 ~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          78 EELAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             HHHHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            48999999999999988643   4567889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1.8e-15  Score=107.27  Aligned_cols=107  Identities=18%  Similarity=0.224  Sum_probs=74.5

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC--
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--  130 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d--  130 (172)
                      .|+.+.|+|++++.+||+++||++.....+    . ...| ..++..+++.......    .+.  ++..|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~----~-~~~~-~~~~~~~~~~~~~~~~----~~~--~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD----D-YAKF-LLEDPRLNFVLNERPG----APG--GGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC----C-eeEE-EecCCceEEEEecCCC----CCC--CCeeEEEEEeCCHH
Confidence            478889999999999999999998764211    1 1223 3333334443221111    011  346899999987  


Q ss_pred             -HHHHHHHHHHCCCeEEecC------CCceEEEEECCCCCEEEEEeec
Q 030725          131 -VSKLKMILDKAGISYTLSK------SGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       131 -ld~~~~~L~~~Gv~i~~~~------~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                       +++++++|.++|+++....      .+.+.+|++|||||.|||+++.
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             7889999999999987431      1246799999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=8.1e-16  Score=109.21  Aligned_cols=110  Identities=18%  Similarity=0.190  Sum_probs=71.3

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCC--CCCCCC-CCCCCCcceEEE--EE
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP--DPLSGR-PEHGGRDRHTCI--AI  128 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~--~~~~~~-p~~~g~~~Hi~f--~V  128 (172)
                      |+.+.|+|+++|++||+++|||++... .   ..  ...+..++..+.+......  ...... ........|++|  .+
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~-~---~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~   75 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRS-S---ET--WVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSE   75 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeec-c---CC--cccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeH
Confidence            688999999999999999999998642 1   11  1123333333333222111  100000 011123467765  56


Q ss_pred             CCHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCEEEEEe
Q 030725          129 RDVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~--------~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +|+++++++|+++|+++...        .++.+.+||+|||||.|||..
T Consensus        76 ~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          76 EEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             HHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            79999999999999998732        234588999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.68  E-value=1.4e-15  Score=107.56  Aligned_cols=105  Identities=16%  Similarity=0.137  Sum_probs=77.1

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~--  129 (172)
                      ..|+.+.++|++++++||+++|||+.... .   .  ...|+..++...+++.....       . .....|++|.|+  
T Consensus         4 i~hv~l~v~d~~~s~~FY~~~lG~~~~~~-~---~--~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~v~~~   69 (120)
T cd08362           4 LRGVGLGVPDLAAAAAFYREVWGLSVVAE-D---D--GIVYLRATGSEHHILRLRRS-------D-RNRLDVVSFSVASR   69 (120)
T ss_pred             eeEEEEecCCHHHHHHHHHhCcCcEEEEe-c---C--CEEEEECCCCccEEEEeccC-------C-CCCCceEEEEeCCH
Confidence            46789999999999999999999998642 1   1  24566544333344433211       0 123479999994  


Q ss_pred             -CHHHHHHHHHHCCCeEEec------CCCceEEEEECCCCCEEEEEee
Q 030725          130 -DVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 -dld~~~~~L~~~Gv~i~~~------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                       ++++++++|+++|+++...      .++.+.+||+||+||.|||+..
T Consensus        70 ~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~  117 (120)
T cd08362          70 ADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSAD  117 (120)
T ss_pred             HHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEec
Confidence             6899999999999998632      3466789999999999999874

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.68  E-value=8.9e-16  Score=109.15  Aligned_cols=117  Identities=18%  Similarity=0.198  Sum_probs=80.3

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCC-CCCcceEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCcceEEEEEC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIR  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~g~~~l~L~~~~~~~~~~~--~p~~~g~~~Hi~f~V~  129 (172)
                      .|+.+.++|++++.+||+++||++.....+.. .......|+..++..+.++..........  ....+.+..|++|.|+
T Consensus         2 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v~   81 (128)
T cd07249           2 DHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEVD   81 (128)
T ss_pred             cEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEeC
Confidence            36788999999999999999999997533211 12233456666777788875432211100  0012345689999999


Q ss_pred             CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCC--CCEEEEEe
Q 030725          130 DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPD--ANALEFTQ  169 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPD--Gn~iEl~e  169 (172)
                      |+++++++|+++|+++...     .+|...+|+.|||  ||.|||+|
T Consensus        82 d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          82 DIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             CHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            9999999999999998743     2344445555555  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.68  E-value=1.2e-15  Score=112.81  Aligned_cols=102  Identities=13%  Similarity=0.160  Sum_probs=74.6

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d  130 (172)
                      .|+.|.|+|++++++||+++|||++... .    .....|+..++.  .+.+...          . .++..|++|.|+|
T Consensus         6 ~Hv~i~V~Dle~s~~FY~~~LG~~~~~~-~----~~~~~~l~~~~~~~~~~l~~~----------~-~~~~~hiaf~v~d   69 (144)
T cd07239           6 SHVVLNSPDVDKTVAFYEDVLGFRVSDW-L----GDQMAFLRCNSDHHSIAIARG----------P-HPSLNHVAFEMPS   69 (144)
T ss_pred             eEEEEECCCHHHHHHHHHhcCCCEEEEe-e----CCeEEEEECCCCcceEEEccC----------C-CCceEEEEEECCC
Confidence            5788999999999999999999998642 1    112456666543  2333211          1 1346899999998


Q ss_pred             HHHHH---HHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          131 VSKLK---MILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       131 ld~~~---~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++++.   ++|+++|+++...     .++.+.+||+|||||.|||++.
T Consensus        70 ~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~  117 (144)
T cd07239          70 IDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSE  117 (144)
T ss_pred             HHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccC
Confidence            87775   8999999998632     2334678999999999999875

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.68  E-value=1.4e-15  Score=114.29  Aligned_cols=108  Identities=19%  Similarity=0.214  Sum_probs=72.4

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.|.|+|+++|++||+++|||++..............|+..++.  .+.+...           .+.+.+|+||.|+
T Consensus         4 l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~-----------~~~~~~Hiaf~v~   72 (161)
T cd07256           4 LDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGG-----------NGPRLHHVAFWVP   72 (161)
T ss_pred             EEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecC-----------CCCceeEEEEEcC
Confidence            35799999999999999999999998642211111112345544322  2222111           1224689999998


Q ss_pred             C---HHHHHHHHHHCCCeEE--ec-----CCCceEEEEECCCCCEEEEEee
Q 030725          130 D---VSKLKMILDKAGISYT--LS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 d---ld~~~~~L~~~Gv~i~--~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |   +++++++|+++|+...  ..     .++...+||+|||||.||+++.
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~  123 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTG  123 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeec
Confidence            6   6778889999998632  11     1345679999999999999853

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.68  E-value=2.1e-15  Score=109.08  Aligned_cols=107  Identities=15%  Similarity=0.232  Sum_probs=76.7

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeE--EEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~--l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d  130 (172)
                      .|+.+.|+|++++++||+++||+++...... .......|+..++..  +.+....         . ..+..|++|.|+|
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~---------~-~~~~~hl~~~v~d   69 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGD-PGVDAAAFLRCDEDHHDLALFPGP---------E-RPGLHHVAFEVES   69 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEcc-CCceeEEEEEcCCCcceEEEEcCC---------C-CCCeeEEEEEcCC
Confidence            3788999999999999999999998653221 111235676665432  3332211         0 2346899999998


Q ss_pred             HH---HHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          131 VS---KLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       131 ld---~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++   +++++|+++|+++...     ..+.+.+||+|||||.|||.+.
T Consensus        70 ~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~  117 (131)
T cd08343          70 LDDILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAE  117 (131)
T ss_pred             HHHHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcC
Confidence            75   6889999999998742     2345788999999999999874

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2e-15  Score=106.10  Aligned_cols=104  Identities=16%  Similarity=0.122  Sum_probs=74.0

Q ss_pred             eeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---
Q 030725           55 MSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---  130 (172)
Q Consensus        55 ~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~-g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d---  130 (172)
                      +.+.|+|+++|++||+++||++.....    ..  ..++.. ++..+.++..+...+   .+...++..|++|.|++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~--~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PT--FALFVLGSGVKLGLWSRHTVEP---ASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----Cc--eEEEEeCCCcEEEEeeccccCC---CCCCCCCceEEEEEcCCHHH
Confidence            467789999999999999999986421    11  233444 345667765432211   11112345799999985   


Q ss_pred             HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEE
Q 030725          131 VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~  168 (172)
                      ++++++++.++|+++...    .+| +.++|+|||||.||++
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g-~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFG-YTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCc-cEEEEECCCCCEEEee
Confidence            788999999999998743    355 5789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.7e-15  Score=109.12  Aligned_cols=109  Identities=16%  Similarity=0.162  Sum_probs=72.5

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCC-------CCcceEE----EEeC----CeEEEEEecCCCCCCCCCCC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDK-------LPYRGAW----LWVG----AEMIHLMELPNPDPLSGRPE  116 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~-------~~~~~~~----~~~g----~~~l~L~~~~~~~~~~~~p~  116 (172)
                      .+|++|.|+|+++|++||+++|||+...+.....       ..+.+.|    +..+    +..++|.......    ...
T Consensus         3 ~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~----~~~   78 (127)
T cd08358           3 ALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIG----DYE   78 (127)
T ss_pred             eEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCC----CCC
Confidence            4688999999999999999999999764221111       1222333    3222    2245554322111    111


Q ss_pred             CCCCcceEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEEe
Q 030725          117 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       117 ~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e  169 (172)
                       .+. .|++|.|++. ++.++|+++|+++...+.+  .+|++||||+.|||+.
T Consensus        79 -~g~-~~~hlav~~~-d~~~~l~~~Gv~~~~~~~~--~~fi~DPDG~~ie~~~  126 (127)
T cd08358          79 -LGN-DFLGITIHSK-QAVSNAKKHNWPVTEVEDG--VYEVKAPGGYKFYLID  126 (127)
T ss_pred             -CCC-CEEEEEEECH-HHHHHHHHCCCceecCCCC--EEEEECCCCCEEEEec
Confidence             223 3788888877 5569999999999876544  7899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.67  E-value=4.2e-15  Score=107.37  Aligned_cols=110  Identities=22%  Similarity=0.234  Sum_probs=77.8

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-C--eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-A--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~--~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      .|+.+.++|++++++||+++||+++....+   . ....|+..+ .  ..+.++..+....    +...++..|++|.|+
T Consensus         3 ~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~---~-~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~f~v~   74 (134)
T cd08348           3 SHVVLYVRDLEAMVRFYRDVLGFTVTDRGP---L-GGLVFLSRDPDEHHQIALITGRPAAP----PPGPAGLNHIAFEVD   74 (134)
T ss_pred             eEEEEEecCHHHHHHHHHHhcCCEEEeecc---C-CcEEEEEecCCCceEEEEEecCCCCC----CCCCCCceEEEEEeC
Confidence            578899999999999999999999875322   1 123455554 2  2455554332110    111234679999998


Q ss_pred             CHH---HHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEee
Q 030725          130 DVS---KLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 dld---~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |.+   +++++|.++|+++...  ..+.+.+||+|||||.|||+..
T Consensus        75 ~~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  120 (134)
T cd08348          75 SLDDLRDLYERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVD  120 (134)
T ss_pred             CHHHHHHHHHHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEc
Confidence            765   5789999999988743  3445789999999999999874

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.67  E-value=3.1e-15  Score=113.15  Aligned_cols=111  Identities=16%  Similarity=0.181  Sum_probs=76.4

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.+.|.|++++++||+++|||+...............|+...+.  .+.+....  .      ...++.+|+||.|+
T Consensus         7 i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~--~------~~~~~~~hiaf~v~   78 (166)
T cd09014           7 LDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDP--A------GARGRLHHLAYALD   78 (166)
T ss_pred             eeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCC--C------CCCCCceEEEEECC
Confidence            45899999999999999999999998643221111223467766432  34332211  1      11234689999998


Q ss_pred             CH---HHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          130 DV---SKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 dl---d~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |.   ++++++|+++|+++...     ..+..++||+|||||.|||.+.
T Consensus        79 ~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          79 TREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            65   57889999999998522     1233468999999999999875

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.66  E-value=2.6e-15  Score=102.54  Aligned_cols=108  Identities=23%  Similarity=0.268  Sum_probs=80.3

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  133 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~  133 (172)
                      |+.+.++|++++++||+++||++.......  ......++..++..+++...+.....    ...++..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~~~~i~l~~~~~~~~~----~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLGGTRLELFEGDEPAPA----PSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecCCceEEEecCCCCCCc----ccCCCeeEEEEECCCHHH
Confidence            567888999999999999999998763221  11233455556667777655422111    123456899999999999


Q ss_pred             HHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEE
Q 030725          134 LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEF  167 (172)
Q Consensus       134 ~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl  167 (172)
                      +.++|+++|+.+...    .++.+.+|+.||+||.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            999999999988743    4567899999999999996

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.66  E-value=2.6e-15  Score=112.13  Aligned_cols=108  Identities=14%  Similarity=0.183  Sum_probs=75.8

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCC---CCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHD---KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~---~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      .|+.|.|+|++++++||+++|||++.......   ......+|+..++.  .+.+...+          ...+.+|+||.
T Consensus        11 ~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~----------~~~g~~Hiaf~   80 (154)
T cd07237          11 GHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGP----------GPKRIHHLMLE   80 (154)
T ss_pred             CEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCC----------CCceeEEEEEE
Confidence            47889999999999999999999986421100   01223456666432  22322211          12357899999


Q ss_pred             ECCHH---HHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          128 IRDVS---KLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~dld---~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+|++   +++++|+++|+++...     ..+.+++|++|||||.|||...
T Consensus        81 V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~  131 (154)
T cd07237          81 VTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWG  131 (154)
T ss_pred             cCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccC
Confidence            98765   6899999999998643     2456889999999999999753

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.66  E-value=2.1e-15  Score=111.28  Aligned_cols=103  Identities=12%  Similarity=0.206  Sum_probs=74.7

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH-
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV-  131 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~-~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl-  131 (172)
                      |+.+.|+|++++++||+++|||++... .    ....+|+..++ ...+++...        +...++.+|+||.|+|+ 
T Consensus         2 Hv~l~V~Dle~s~~Fy~~vLG~~~~~~-~----~~~~~~l~~~~~~~~h~~~~~--------~~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           2 HVVIGSENFEASRDSLVEDFGFRVSDL-I----EDRIVFMRCHPNPFHHTFAVG--------PASSSHFHHVNFMVTDID   68 (141)
T ss_pred             cEEEecCCHHHHHHHHHhcCCCEeeee-e----CCEEEEEEcCCCCCcceeeec--------cCCCCceEEEEEECCCHH
Confidence            678999999999999999999998652 1    11345665432 223433221        11234679999999865 


Q ss_pred             --HHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEe
Q 030725          132 --SKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       132 --d~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                        ++++++|+++|+++...     ..+.+.+||+|||||.|||.-
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  113 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSF  113 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEe
Confidence              56799999999988632     355678999999999999965

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=3.6e-15  Score=105.17  Aligned_cols=110  Identities=15%  Similarity=0.130  Sum_probs=76.4

Q ss_pred             eeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCC--CCCCCcceEEEEE---C
Q 030725           55 MSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP--EHGGRDRHTCIAI---R  129 (172)
Q Consensus        55 ~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p--~~~g~~~Hi~f~V---~  129 (172)
                      +.|.|+|++++.+||+++||+++... +    .....++..++..++++..+........+  .......|++|.+   +
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~-~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD-S----NDGVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEE   76 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc-C----CCceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHH
Confidence            56788999999999999999998642 1    11234566666677776543211000111  1122335677765   5


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          130 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      |++++++++++.|+++..+    .+|.+.+|++|||||+|||..
T Consensus        77 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          77 EVDAVLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            7999999999999998733    356789999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.66  E-value=1.7e-16  Score=112.20  Aligned_cols=115  Identities=22%  Similarity=0.287  Sum_probs=75.6

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCC--CCCCcceEEEEeCCeEEEEEecCCCCCCCCCCC-CCCCcceEEEEEC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPE-HGGRDRHTCIAIR  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~-~~g~~~Hi~f~V~  129 (172)
                      .|+++.|+|++++++||+++|||+.......  ........++..+...+.++....+........ ......|+++.+.
T Consensus         3 ~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~   82 (128)
T PF00903_consen    3 DHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFLAF   82 (128)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEEES
T ss_pred             EEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEEec
Confidence            4788999999999999999999999864331  111122334555555666655432221110000 0013467888775


Q ss_pred             ---CHHHHHHHHHHCCCeEEec----C-CCceEEEEECCCCCEEEE
Q 030725          130 ---DVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEF  167 (172)
Q Consensus       130 ---dld~~~~~L~~~Gv~i~~~----~-~g~~~~y~~DPDGn~iEl  167 (172)
                         |+++++++|+++|+++...    . .+...+|++|||||.|||
T Consensus        83 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   83 DVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             SHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             cHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence               6778899999999998743    2 334456899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>PRK06724 hypothetical protein; Provisional

Probab=99.63  E-value=1.1e-14  Score=105.80  Aligned_cols=103  Identities=17%  Similarity=0.106  Sum_probs=70.6

Q ss_pred             EEeeeeecCChHHHHHHhHhcc---CCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKI---GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vL---G~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      ..|+.+.|+|+++|++||+++|   |++....         ..| ..|...+.|......   .  +. ..+..|+||.|
T Consensus         8 i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~---------~~~-~~g~~~l~l~~~~~~---~--~~-~~g~~h~af~v   71 (128)
T PRK06724          8 IHHIEFWVANLEESISFYDMLFSIIGWRKLNE---------VAY-STGESEIYFKEVDEE---I--VR-TLGPRHICYQA   71 (128)
T ss_pred             cCEEEEEeCCHHHHHHHHHHHHhhCCcEEeee---------Eee-eCCCeeEEEecCCcc---c--cC-CCCceeEEEec
Confidence            4689999999999999999966   5554311         011 123333433322110   0  11 12357999998


Q ss_pred             ---CCHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEee
Q 030725          129 ---RDVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ---~dld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                         +|+|+++++|+++|+++...       .+|.+++||+|||||.|||..-
T Consensus        72 ~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         72 INRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             CChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence               68999999999999998522       2556889999999999999753

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=1e-14  Score=103.79  Aligned_cols=106  Identities=18%  Similarity=0.197  Sum_probs=72.4

Q ss_pred             EeeeeecCChHHHHHHhHhc---cCCEEeeecCCCCCCcceEEEEeC--CeEEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDK---IGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~v---LG~~~~~~~~~~~~~~~~~~~~~g--~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      .|+.+.|+|++++++||+++   ||++...+..    . ...++..+  +..+.+.......     +...++..|++|.
T Consensus         2 ~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~hi~f~   71 (123)
T cd07262           2 DHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG----P-GAVGYGKGGGGPDFWVTKPFDGE-----PATAGNGTHVAFA   71 (123)
T ss_pred             cEEEEecCcHHHHHHHHHHHHhhcCceEEeecC----C-ceeEeccCCCCceEEEeccccCC-----CCCCCCceEEEEE
Confidence            47889999999999999999   6998864210    1 11233332  3456654322111     1112234799999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEec----C---CCceEEEEECCCCCEEEEE
Q 030725          128 IRD---VSKLKMILDKAGISYTLS----K---SGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       128 V~d---ld~~~~~L~~~Gv~i~~~----~---~g~~~~y~~DPDGn~iEl~  168 (172)
                      |+|   ++++++++.++|+.+...    .   .+.+.+||+|||||.|||+
T Consensus        72 v~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          72 APSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            986   788899999999987632    1   2345789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.62  E-value=1.2e-14  Score=103.00  Aligned_cols=105  Identities=17%  Similarity=0.120  Sum_probs=74.3

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-C-eEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-A-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~-~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      -..|+.+.|.|++++++||+++||+++... .    . ...|+... + ....+...+.        . ..+..|++|.|
T Consensus         4 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~-~----~-~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~hi~~~v   68 (121)
T cd07266           4 RLGHVELRVTDLEKSREFYVDVLGLVETEE-D----D-DRIYLRGLEEFIHHSLVLTKA--------P-VAGLGHIAFRV   68 (121)
T ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEecc-C----C-CeEEEEecCCCceEEEEEeeC--------C-CCceeEEEEEC
Confidence            356899999999999999999999998642 1    1 23455432 1 2222221111        1 12357999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          129 R---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~---dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .   |+++++++|+++|+++...     +++.+.+|+.|||||.||++..
T Consensus        69 ~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          69 RSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             CCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            4   7889999999999998632     2335789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.62  E-value=1.9e-14  Score=101.24  Aligned_cols=100  Identities=22%  Similarity=0.260  Sum_probs=69.4

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe-CCeE--EEEEecCCCCCCCCCCCCCCCcceEE--E
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV-GAEM--IHLMELPNPDPLSGRPEHGGRDRHTC--I  126 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~-g~~~--l~L~~~~~~~~~~~~p~~~g~~~Hi~--f  126 (172)
                      ..|+.+.|+|++++++||+ +|||++... .      ...++.. ++..  +.+...+           .....|++  +
T Consensus         3 i~hv~l~v~d~~~s~~FY~-~lG~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~   63 (112)
T cd08344           3 IDHFALEVPDLEVARRFYE-AFGLDVREE-G------DGLELRTAGNDHRWARLLEGA-----------RKRLAYLSFGI   63 (112)
T ss_pred             eeEEEEecCCHHHHHHHHH-HhCCcEEee-c------CceEEEecCCCceEEEeecCC-----------CCceeeEEEEe
Confidence            4689999999999999997 699998642 2      1233333 3222  2232111           11234544  4


Q ss_pred             EECCHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~dld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .++|+++++++|+++|+++...  .++.+.+||+|||||.|||...
T Consensus        64 ~~~d~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~DP~Gn~iel~~~  109 (112)
T cd08344          64 FEDDFAAFARHLEAAGVALAAAPPGADPDGVWFRDPDGNLLQVKVA  109 (112)
T ss_pred             EhhhHHHHHHHHHHcCCceecCCCcCCCCEEEEECCCCCEEEEecC
Confidence            5689999999999999998643  4555689999999999999853

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.59  E-value=2.6e-14  Score=116.38  Aligned_cols=104  Identities=15%  Similarity=0.178  Sum_probs=75.7

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC-
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-  130 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d-  130 (172)
                      ..++.+.|+|+++|++||+++|||+.... .    .....|+.++.....+...+.+         .....|++|.|+| 
T Consensus         4 i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~-~----~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~f~V~~~   69 (286)
T TIGR03213         4 LGYLGIGVSDVDAWREFATEVLGMMVASE-G----ENDALYLRLDSRAHRIAVHPGE---------SDDLAYAGWEVADE   69 (286)
T ss_pred             eeEEEEEeCCHHHHHHHHHhccCcccccC-C----CCceEEEEcCCCceEEEEEECC---------cCCeeeEeeeeCCH
Confidence            46899999999999999999999987542 1    1122355765332333222111         1235799999998 


Q ss_pred             --HHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEe
Q 030725          131 --VSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       131 --ld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e  169 (172)
                        ++++.++|+++|+++...       .++.+.+||.|||||.|||+.
T Consensus        70 ~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~  117 (286)
T TIGR03213        70 AGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYY  117 (286)
T ss_pred             HHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEE
Confidence              888999999999998742       244578999999999999986

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.55  E-value=1.1e-13  Score=113.42  Aligned_cols=111  Identities=19%  Similarity=0.241  Sum_probs=73.8

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCc-ceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      .-..|+.+.|+|++++++||+++|||+............ ...|+..++. .+.+...      ..+. .+..+|+||.|
T Consensus       144 ~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~-~g~~~Hiaf~v  215 (303)
T TIGR03211       144 RRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK-AHDIAFV------GDPE-PGKLHHVSFFL  215 (303)
T ss_pred             eeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC-Cccccee------cCCC-CCceEEEEEEc
Confidence            335689999999999999999999999854321111111 2346554322 1111110      0011 23478999999


Q ss_pred             CCH---HHHHHHHHHCCCeEEecC-----CCceEEEEECCCCCEEEEE
Q 030725          129 RDV---SKLKMILDKAGISYTLSK-----SGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       129 ~dl---d~~~~~L~~~Gv~i~~~~-----~g~~~~y~~DPDGn~iEl~  168 (172)
                      +|+   ++++++|+++|+++...+     .+.+++||+|||||.||+.
T Consensus       216 ~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       216 DSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             CCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence            974   557789999999986431     2346899999999999997

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.54  E-value=1.9e-13  Score=111.35  Aligned_cols=110  Identities=12%  Similarity=0.158  Sum_probs=75.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeec--CCC-CCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEAR--PHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~--~~~-~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      ..|+.+.|+|++++.+||+++|||++....  +.. ...+...|+..++....+.....       + ..++.+|+||.|
T Consensus       143 l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~-------~-~~~~~~Hiaf~v  214 (286)
T TIGR03213       143 LGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAG-------P-SEKRLNHLMLEV  214 (286)
T ss_pred             ccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecC-------C-CCCceEEEEEEc
Confidence            457999999999999999999999986421  100 01123557766543222211110       1 123578999999


Q ss_pred             CCHHH---HHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          129 RDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       129 ~dld~---~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +|+++   ++++|+++|+.....    .++..++||+|||||+||+..
T Consensus       215 ~d~~~v~~~~~~l~~~G~~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       215 DTLDDVGLALDRVDADGIVASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             CCHHHHHHHHHHHHHCCCEEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            98776   799999999943321    245678999999999999975

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.53  E-value=2.3e-13  Score=110.89  Aligned_cols=105  Identities=17%  Similarity=0.101  Sum_probs=75.4

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC-e-EEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA-E-MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~-~-~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      -..|+.+.|+|++++++||+++|||++....+      ..+|+.... . ...+.....       +  ..+..|++|.|
T Consensus         4 ~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~-------~--~~~~~hiaf~v   68 (294)
T TIGR02295         4 RTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKA-------P--SAALSYIGFRV   68 (294)
T ss_pred             eeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeC-------C--CcCccEEEEEe
Confidence            35689999999999999999999999865311      234554321 1 112211110       1  12358999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEee
Q 030725          129 R---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~---dld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +   |+++++++|+++|+++...  ..+.+.+||+|||||.|||+..
T Consensus        69 ~~~~dl~~~~~~l~~~Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~  115 (294)
T TIGR02295        69 SKEEDLDKAADFFQKLGHPVRLVRDGGQPEALRVEDPFGYPIEFYFE  115 (294)
T ss_pred             CCHHHHHHHHHHHHhcCCcEEeecCCCCceEEEEECCCCCEEEEEEc
Confidence            7   7889999999999998743  3456889999999999999863

The enzyme from Bacillus brevis contains manganese.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.52  E-value=3.3e-13  Score=109.95  Aligned_cols=109  Identities=24%  Similarity=0.316  Sum_probs=71.4

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      ..|+.+.|+|+++|++||+++|||++..............|+..++. .+.+....        ..+++.+|+||.|+|.
T Consensus       137 i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~Hiaf~v~d~  207 (294)
T TIGR02295       137 LDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG-VHDIALTN--------GNGPRLHHIAYWVHDP  207 (294)
T ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC-cCceEeec--------CCCCceeeEEEEcCCH
Confidence            45899999999999999999999998643211111112344433221 11111110        1123578999999984


Q ss_pred             ---HHHHHHHHHCCCe--EEec--C---CCceEEEEECCCCCEEEEEe
Q 030725          132 ---SKLKMILDKAGIS--YTLS--K---SGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       132 ---d~~~~~L~~~Gv~--i~~~--~---~g~~~~y~~DPDGn~iEl~e  169 (172)
                         ++++++|+++|++  +...  .   .+..++|++|||||.||++.
T Consensus       208 ~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~  255 (294)
T TIGR02295       208 LNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYT  255 (294)
T ss_pred             HHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEe
Confidence               4568899999987  4322  1   23457999999999999976

The enzyme from Bacillus brevis contains manganese.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.50  E-value=2.8e-13  Score=100.11  Aligned_cols=122  Identities=20%  Similarity=0.231  Sum_probs=82.2

Q ss_pred             eeeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecC--CCCC--CCCCCCC-CCCcc
Q 030725           48 FLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELP--NPDP--LSGRPEH-GGRDR  122 (172)
Q Consensus        48 ~l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~--~~~~--~~~~p~~-~g~~~  122 (172)
                      +++-.-.+++.+.+..+...||..+||++.....|. .....+.|.......++|.-.-  ..++  .--.+.. +.+++
T Consensus        39 fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~-~~~~~~v~~~~~~~~~ELthn~Gtes~~~~~~~ngN~~prGfg  117 (170)
T KOG2944|consen   39 FYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPK-PEHGVSVFVFSRNAKLELTHNWGTESPPDQAYLNGNKEPRGFG  117 (170)
T ss_pred             hhhhhccceeechhhhhHhhhHHHhhcccccccCcc-CCCCCceEEecccCceeeecCCCCCCCcchhhcCCCCCCCccc
Confidence            444444667777788888888888888887655552 2333346766666566664211  1111  1001111 23679


Q ss_pred             eEEEEECCHHHHHHHHHHCCCeEEec-CCC--ceEEEEECCCCCEEEEEee
Q 030725          123 HTCIAIRDVSKLKMILDKAGISYTLS-KSG--RPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       123 Hi~f~V~dld~~~~~L~~~Gv~i~~~-~~g--~~~~y~~DPDGn~iEl~e~  170 (172)
                      ||||.|+|+++++++|+++||++... ..|  ...+|+.||||+.||+...
T Consensus       118 HIci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  118 HICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             eEEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeec
Confidence            99999999999999999999998754 333  2578999999999999754

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.50  E-value=5.6e-13  Score=109.24  Aligned_cols=102  Identities=15%  Similarity=0.129  Sum_probs=73.7

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~-g~---~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      ..|+.+.|+|++++++||+++|||++....+      ..+++.. ++   ..+.+...           ...+..|+||.
T Consensus         5 i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~-----------~~~g~~hiaf~   67 (303)
T TIGR03211         5 LGHVELRVLDLEESLKHYTDVLGLEETGRDG------QRVYLKAWDEWDHYSVILTEA-----------DTAGLDHMAFK   67 (303)
T ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEeeecC------ceEEEEeccccccceEeeccC-----------CCCceeEEEEE
Confidence            3589999999999999999999999865221      1334443 21   12222110           11246899999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          128 IR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~---dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+   |+++++++|+++|+++...     ....+.+||+|||||.|||++.
T Consensus        68 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~  118 (303)
T TIGR03211        68 VESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAE  118 (303)
T ss_pred             eCCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEc
Confidence            98   7889999999999998632     2334789999999999999874

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>PLN02300 lactoylglutathione lyase

Probab=99.49  E-value=6.3e-13  Score=108.55  Aligned_cols=115  Identities=17%  Similarity=0.135  Sum_probs=79.3

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~----~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      .|+.+.|+|++++.+||+++||++...........+...++..++.    .+++......    ..+..+.+.+|++|.|
T Consensus       156 ~~~~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~----~~~~~g~~~~~i~~~v  231 (286)
T PLN02300        156 CQVMLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGV----TEYTKGNAYAQIAIGT  231 (286)
T ss_pred             eeEEEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCC----CccccCCceeEEEEec
Confidence            3788889999999999999999998642211123344455544221    3443221111    1112234567999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec----CC-CceEEEEECCCCCEEEEEeec
Q 030725          129 RDVSKLKMILDKAGISYTLS----KS-GRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~----~~-g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +|+++++++++++|+++..+    ++ +.+.++|+|||||.|+|++..
T Consensus       232 ~di~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        232 DDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             CCHHHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            99999999999999998743    22 236789999999999999864

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.45  E-value=1.1e-12  Score=92.37  Aligned_cols=110  Identities=24%  Similarity=0.387  Sum_probs=74.8

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe---CCe-EEEEEecCCCCCCCCC-CCCCCCcceEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV---GAE-MIHLMELPNPDPLSGR-PEHGGRDRHTC  125 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~---g~~-~l~L~~~~~~~~~~~~-p~~~g~~~Hi~  125 (172)
                      +.-|++++|+|++++++||.++||++.-.+        ...|+..   |.+ ..|+-..+... .++. -.+.--..|++
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRs--------td~wvdfDfyGHQ~v~Hl~~q~~~~-~~g~V~~~~v~~pHfG   74 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRS--------TDTWVDFDFYGHQVVAHLTPQPDSQ-GSGKVDGHGVPPPHFG   74 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccc--------cceEEEeeecccEEEEEecCCcccc-cCcccCCCCCCCccce
Confidence            345899999999999999999999988532        1235443   433 34553222111 1111 11122346777


Q ss_pred             E--EECCHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCEEEEEe
Q 030725          126 I--AIRDVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       126 f--~V~dld~~~~~L~~~Gv~i~~~--------~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      .  .++|+-++.++|+++|+++..+        .+..+.+|+.||.||.||+..
T Consensus        75 vVl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~  128 (138)
T COG3565          75 VVLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKG  128 (138)
T ss_pred             EEEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeec
Confidence            5  5679999999999999988632        345678999999999999965

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.41  E-value=4.1e-12  Score=101.51  Aligned_cols=110  Identities=20%  Similarity=0.280  Sum_probs=80.6

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCcceEEEEEC-
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~-~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~-  129 (172)
                      ...+.+.|+|++.+..||+++||+++.++..      ..+-+.+|+. -+.|.+.+....  ..+. ..+..|++|.++ 
T Consensus        11 v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~~LL~L~q~~~a~~--~~~~-~aGLyH~AfLlP~   81 (265)
T COG2514          11 VGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGTPLLTLEQFPDARR--PPPR-AAGLYHTAFLLPT   81 (265)
T ss_pred             EEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCEEEEEEEeCCCCCC--CCcc-ccceeeeeeecCC
Confidence            4567888999999999999999999986422      3345667766 344544443221  1122 235689999998 


Q ss_pred             --CHHHHHHHHHHCCCeEEe-c-CCCceEEEEECCCCCEEEEEee
Q 030725          130 --DVSKLKMILDKAGISYTL-S-KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 --dld~~~~~L~~~Gv~i~~-~-~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                        |+..++.++.+.|+++.- . +.-..++||.||+||-||++..
T Consensus        82 r~~L~~~l~hl~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaD  126 (265)
T COG2514          82 REDLARVLNHLAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYAD  126 (265)
T ss_pred             HHHHHHHHHHHHhcCCcccccCcchhheeeeecCCCCCeEEEEec
Confidence              467788899999999862 2 4556789999999999999864

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.41  E-value=1.2e-12  Score=92.00  Aligned_cols=92  Identities=20%  Similarity=0.213  Sum_probs=68.5

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~--~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      |+.+.|+|++++++||+++||+.............+..|+..++  ..++|++.........  ..+++.+|+||.|+|+
T Consensus         2 Hv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~--~~~~gi~Hia~~v~D~   79 (109)
T PF13669_consen    2 HVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLD--RGGGGIHHIAFEVDDL   79 (109)
T ss_dssp             EEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHH--HTSSEEEEEEEEESHH
T ss_pred             EEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccc--cCCCCEEEEEEEeCCH
Confidence            78899999999999999999998754322122445567788876  4789987543221101  1356789999999999


Q ss_pred             HHHHHHHHHCCCeEEe
Q 030725          132 SKLKMILDKAGISYTL  147 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~  147 (172)
                      ++.+++|+++|+++..
T Consensus        80 d~~~~~l~~~G~~~~~   95 (109)
T PF13669_consen   80 DAAIARLEAQGFRVLD   95 (109)
T ss_dssp             HHHHHHHHHTTECEEE
T ss_pred             HHHHHHHHHCCCEEcc
Confidence            9999999999999874

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.21  E-value=6.8e-10  Score=80.13  Aligned_cols=103  Identities=13%  Similarity=-0.004  Sum_probs=69.7

Q ss_pred             CChHHHHHHhHhccCCEEeeecCCCC----------CCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           60 GILKKEPIRDSDKIGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        60 ~dle~s~~FY~~vLG~~~~~~~~~~~----------~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      .|.+++++||+++||+++....+.+.          .....+-+.+++..+.+........    . ..+...++++.|+
T Consensus         9 ~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~~~~----~-~~~~~~~l~i~~~   83 (128)
T cd06588           9 GNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGPGFP----F-TFGNGISLSVECD   83 (128)
T ss_pred             CCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCCCCC----C-CCCCCEEEEEECC
Confidence            68999999999999999876432110          0112334667777777654331111    0 1233468999998


Q ss_pred             C---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEE
Q 030725          130 D---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       130 d---ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~  168 (172)
                      |   +++++++|.+.| .+..+    .||.+..+++||+|+.|+|.
T Consensus        84 ~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          84 SEEEADRLFEALSEGG-TVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             CHHHHHHHHHHHhcCC-eEeccchhcCcccccEEEECCCCCEEEeC
Confidence            6   667889987777 55422    58888999999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.20  E-value=4.3e-10  Score=81.41  Aligned_cols=110  Identities=13%  Similarity=0.009  Sum_probs=73.0

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  132 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~-~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld  132 (172)
                      +.-|.++|++++++||++++|+.......  ........+..++ .....+...    ....|.  +...++.|.|+|++
T Consensus        12 w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~--~~~~~y~~f~~~~~~~gG~l~~~----~~~~p~--~~~~~iy~~v~did   83 (127)
T COG3324          12 WFELPVSDLERAKAFYEKVFGWTFEDYFD--MGEMRYAVFPADGAGAGGGLMAR----PGSPPG--GGGWVIYFAVDDID   83 (127)
T ss_pred             EEeeecCCHHHHHHHHHHhhCceeccccc--CCCceEEEEECCCccccceeccC----CcCCCC--CCCEEEEEecCChH
Confidence            34456899999999999999999864211  1112222232222 111111111    001111  34468999999999


Q ss_pred             HHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          133 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       133 ~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +..++..++|..+..+    +.+.+.+.+.||+||.|-|.++.
T Consensus        84 ~~l~rv~~~GG~V~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          84 ATLERVVAAGGKVLRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             HHHHHHHhcCCeEEecccccCCceEEEEEECCCCCEEEEeecC
Confidence            9999999999999844    34667889999999999998864

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.05  E-value=2.8e-09  Score=76.16  Aligned_cols=116  Identities=16%  Similarity=0.101  Sum_probs=74.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCC---CCCCCcceEEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP---EHGGRDRHTCIAI  128 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p---~~~g~~~Hi~f~V  128 (172)
                      +..+.++|+||++|++||+ .|||+.... ..+ . .....+..++..+.|++...-..-..++   ....+..-+|+.+
T Consensus         4 mIFvNLPVkDL~~S~~Fy~-alGfk~Npq-~sd-e-~a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls~   79 (133)
T COG3607           4 MIFVNLPVKDLEASKAFYT-ALGFKFNPQ-FSD-E-DAACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLSA   79 (133)
T ss_pred             EEEEecchhhHHHHHHHHH-HhCcccCCC-ccc-c-cceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEecc
Confidence            4467889999999999999 599998752 111 1 1122333344444444332110000000   1123446789988


Q ss_pred             C---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEeec
Q 030725          129 R---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       129 ~---dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      .   ++|+++++..++|.+...+   .+..+..-|.|||||.||+..++
T Consensus        80 ~s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~m~  128 (133)
T COG3607          80 GSREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLWMD  128 (133)
T ss_pred             CcHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEEeC
Confidence            6   4788999999999988633   35566778999999999998764

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.94  E-value=6.8e-08  Score=70.90  Aligned_cols=108  Identities=16%  Similarity=0.045  Sum_probs=74.4

Q ss_pred             cC-ChHHHHHHhHhccCCEEeeecCCCC----------CCcceEEEEeCCeEEEEEecCCCCCCCCCCCC-CCCcceEEE
Q 030725           59 GG-ILKKEPIRDSDKIGLEINEARPHDK----------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEH-GGRDRHTCI  126 (172)
Q Consensus        59 ~~-dle~s~~FY~~vLG~~~~~~~~~~~----------~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~-~g~~~Hi~f  126 (172)
                      .+ |-+++++||+++||.+.....+.++          ...-++-+.+++..+.+.......    .+.. ++...-+-+
T Consensus         8 f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~----~~~~~~~~s~~l~~   83 (136)
T COG2764           8 FNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDM----GATEGGGTSLSLDL   83 (136)
T ss_pred             ECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCcc----CcccCCCeeEEEEE
Confidence            35 8999999999999999876444222          112234466676666653321111    1111 122345667


Q ss_pred             EECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .++|++++++++.+.|+++..+    .||.+...++||.|+.|-|...
T Consensus        84 ~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~  131 (136)
T COG2764          84 YVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTP  131 (136)
T ss_pred             EehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecC
Confidence            7889999999999999888743    6999999999999999998764

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.94  E-value=2.3e-09  Score=74.82  Aligned_cols=118  Identities=16%  Similarity=0.141  Sum_probs=67.6

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCc-ceEEEEeCCe--EEEEEec-------CCCC-CCCCCCCCC--
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPY-RGAWLWVGAE--MIHLMEL-------PNPD-PLSGRPEHG--  118 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~~~~g~~--~l~L~~~-------~~~~-~~~~~p~~~--  118 (172)
                      ..|+.+.|+|+++|++||+++||++............ ....+.....  .......       .... .........  
T Consensus         3 l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (138)
T COG0346           3 IHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGGD   82 (138)
T ss_pred             eEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCch
Confidence            3578999999999999999999999976432110100 0111111110  0000000       0000 000000111  


Q ss_pred             CCcceEEEEECC---HHHHHHHHHHCCCeEEecC--CCceEEEEECCCCCEEEEEe
Q 030725          119 GRDRHTCIAIRD---VSKLKMILDKAGISYTLSK--SGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       119 g~~~Hi~f~V~d---ld~~~~~L~~~Gv~i~~~~--~g~~~~y~~DPDGn~iEl~e  169 (172)
                      .+..|+++.+++   ...........|..+....  .....+||+||||+.||+.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          83 LGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hccCceeEecccccccceEEEeeCCCCCEEEeecCCCcceEEEEECCCCcEEEeeC
Confidence            135799999998   6667777777888876431  11127999999999999974

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=98.90  E-value=1.2e-08  Score=78.86  Aligned_cols=95  Identities=13%  Similarity=-0.023  Sum_probs=62.1

Q ss_pred             EEeeeeecC--ChHHHHHHhHhccCCEEeeecCCCC--CCcceEEEEeC--CeEEEEEecCCC-CCCC-C---CCCCCCC
Q 030725           52 KAKMSVEGG--ILKKEPIRDSDKIGLEINEARPHDK--LPYRGAWLWVG--AEMIHLMELPNP-DPLS-G---RPEHGGR  120 (172)
Q Consensus        52 ~a~~~i~~~--dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~~~~g--~~~l~L~~~~~~-~~~~-~---~p~~~g~  120 (172)
                      ..|+++.|.  |++++++||+++|||+.....+...  .......+..+  +..+.|.+...+ .... .   ....+.+
T Consensus         4 iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g~i~l~L~~~~~~~~~s~~~~fl~~~~G~G   83 (191)
T cd07250           4 IDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDGKIRIPLNEPASGKRKSQIQEFLEYYGGAG   83 (191)
T ss_pred             eeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCCcEEEEEecCCCCCCccHHHHHHHHhCCCc
Confidence            457889999  9999999999999999865332111  11112233432  345666543321 1100 0   0112456


Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEE
Q 030725          121 DRHTCIAIRDVSKLKMILDKAGISYT  146 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~~Gv~i~  146 (172)
                      .+|+||.|+|+++++++|+++|+++.
T Consensus        84 v~HIAf~vdDI~~~~~~L~~~Gv~~l  109 (191)
T cd07250          84 VQHIALATDDIFATVAALRARGVEFL  109 (191)
T ss_pred             eeEEEEECCCHHHHHHHHHHcCCeec
Confidence            78999999999999999999999986

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.76  E-value=3.3e-08  Score=78.01  Aligned_cols=112  Identities=22%  Similarity=0.252  Sum_probs=76.4

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCC-------CCCcceEE----EEeCCeEEEE-EecCCCCCCCCCCCCCCCc
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHD-------KLPYRGAW----LWVGAEMIHL-MELPNPDPLSGRPEHGGRD  121 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~-------~~~~~~~~----~~~g~~~l~L-~~~~~~~~~~~~p~~~g~~  121 (172)
                      |....|.|.++++.||+++|||+++..+...       +.+|.+.|    +..|++.-|+ +++...- +.....-+..+
T Consensus        20 H~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNY-gV~~YelGndf   98 (299)
T KOG2943|consen   20 HYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNY-GVSKYELGNDF   98 (299)
T ss_pred             eEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEecc-CccceeccCCc
Confidence            6777889999999999999999997532211       13444544    5567654333 3444221 11223445567


Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEEee
Q 030725          122 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .||.+.++|+-..++.+...|.    ...|.-.+++.||||+.+++++.
T Consensus        99 g~i~I~s~dv~~~ve~v~~p~~----~~~g~~~~~v~dPdGykF~l~~~  143 (299)
T KOG2943|consen   99 GGITIASDDVFSKVEKVNAPGG----KGSGCGIAFVKDPDGYKFYLIDR  143 (299)
T ss_pred             ccEEEeHHHHHHHHHHhcCcCC----cccceEEEEEECCCCcEEEEecc
Confidence            8999999998888887776654    22355568999999999999863

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.75  E-value=1.7e-07  Score=78.85  Aligned_cols=97  Identities=14%  Similarity=0.075  Sum_probs=63.1

Q ss_pred             eeEEEeeeeecC--ChHHHHHHhHhccCCEEeeecCCCCCCcce---EEEEe--CCeEEEEEecCCCCCCC--C---CCC
Q 030725           49 LTTKAKMSVEGG--ILKKEPIRDSDKIGLEINEARPHDKLPYRG---AWLWV--GAEMIHLMELPNPDPLS--G---RPE  116 (172)
Q Consensus        49 l~~~a~~~i~~~--dle~s~~FY~~vLG~~~~~~~~~~~~~~~~---~~~~~--g~~~l~L~~~~~~~~~~--~---~p~  116 (172)
                      +.-..|+++.|.  |+++++.||+++|||+....... ...+.+   .++..  |+..++|.+........  .   ...
T Consensus       156 ~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~-~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl~~~  234 (353)
T TIGR01263       156 LIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDI-KTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEFY  234 (353)
T ss_pred             eEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEe-ccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHHHHc
Confidence            444568999998  99999999999999998643221 011111   12222  34467775421111001  0   011


Q ss_pred             CCCCcceEEEEECCHHHHHHHHHHCCCeEE
Q 030725          117 HGGRDRHTCIAIRDVSKLKMILDKAGISYT  146 (172)
Q Consensus       117 ~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~  146 (172)
                      .+.+.+|+||.|+|+++.+++|+++|+++.
T Consensus       235 ~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l  264 (353)
T TIGR01263       235 NGAGVQHIALNTDDIVRTVRALRARGVEFL  264 (353)
T ss_pred             CCCCccEEEEEcCCHHHHHHHHHHcCCccC
Confidence            245678999999999999999999999886

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.71  E-value=2.7e-07  Score=77.70  Aligned_cols=93  Identities=13%  Similarity=0.053  Sum_probs=63.8

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCC--CCCCCCCcceEEEEECC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG--RPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~--~p~~~g~~~Hi~f~V~d  130 (172)
                      .|+.+.|+|++++.+||.+.|||+...... .........+..|+..+.|.....+.....  ...++.+..|+||.|+|
T Consensus         4 ~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~-~~~~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V~D   82 (353)
T TIGR01263         4 DFVEFYVGDAKQAAYYYFTRFGFEKVAKET-GHREKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRVDD   82 (353)
T ss_pred             EEEEEEeCCHHHHHHHHHHhcCCcEEEEee-cCCceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEECC
Confidence            578999999999999999999999875311 111112223455666677754332211000  01234567899999999


Q ss_pred             HHHHHHHHHHCCCeEE
Q 030725          131 VSKLKMILDKAGISYT  146 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~  146 (172)
                      ++++++++.++|+.+.
T Consensus        83 v~~a~~~l~~~Ga~~v   98 (353)
T TIGR01263        83 AAAAFEAAVERGAEPV   98 (353)
T ss_pred             HHHHHHHHHHCCCEec
Confidence            9999999999999885

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.60  E-value=3.9e-07  Score=75.94  Aligned_cols=101  Identities=10%  Similarity=0.015  Sum_probs=65.9

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC-
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-  130 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d-  130 (172)
                      +.++.++|+|+++|++||+.+||+.. ....   .    +. -+++. +..|-....+.      ......-+|+.+++ 
T Consensus       248 ~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsde---~----a~-cm~dt-I~vMllt~~D~------~~~~evLl~Ls~~Sr  311 (357)
T PRK01037        248 TFSVVLEVQDLRRAKKFYSKMFGLEC-WDGD---K----LF-LLGKT-SLYLQQTKAEK------KNRGTTTLSLELECE  311 (357)
T ss_pred             eEEEEeeeCCHHHHHHHHHHHhCCCC-CCCC---c----cc-cccCc-EEEEEecCCCC------CCcceEEEEeccCCH
Confidence            44899999999999999999999876 4211   1    11 12433 33332222111      12234579999985 


Q ss_pred             --HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEe
Q 030725          131 --VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       131 --ld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e  169 (172)
                        +|+++++..++|.....+  ..|. .--|.|||||.||+.-
T Consensus       312 e~VD~lv~~A~aaGG~~~~~~~D~Gf-~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        312 HDFVRFLRRWEMLGGELGEQADGHFP-LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcccccC-cceeECCCCCEEEEEE
Confidence              778889999999865432  2333 3457899999999974

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.52  E-value=2.3e-07  Score=73.37  Aligned_cols=107  Identities=21%  Similarity=0.210  Sum_probs=70.3

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeE--EEEEecCCCCCCCCCCCCCCCcceEEEEE--C
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCIAI--R  129 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~--l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V--~  129 (172)
                      ++.+.|.||++|+.||++.|||++.+.    +..+..+.+..|+.+  ++|......   ..   ...+...++|.+  +
T Consensus       152 ~V~l~VgdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~q~~LElt~~~~~---id---~~kg~griafaip~d  221 (299)
T KOG2943|consen  152 QVMLNVGDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDEQCVLELTYNYDV---ID---RAKGFGRIAFAIPTD  221 (299)
T ss_pred             EEEEEehhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCcceEEEEEeccCc---cc---ccccceeEEEecccc
Confidence            566778899999999999999999862    133444455666654  444322211   11   122345566765  5


Q ss_pred             CHHHHHHHHHHCCCeEEe-----c---CCCceEEEEECCCCCEEEEEee
Q 030725          130 DVSKLKMILDKAGISYTL-----S---KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~-----~---~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++..+.+.++..+.++..     .   ..+.+.+.+.||||+.|.|+..
T Consensus       222 ~~~~l~e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdd  270 (299)
T KOG2943|consen  222 DLPKLQEAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDD  270 (299)
T ss_pred             ccccHHHHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEecc
Confidence            788888888887666531     1   2345677889999999999753

>PRK10148 hypothetical protein; Provisional

Probab=98.35  E-value=4.2e-05  Score=56.81  Aligned_cols=103  Identities=12%  Similarity=-0.030  Sum_probs=66.4

Q ss_pred             ChHHHHHHhHhccCCEEeeec-----CCC---------------CCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCC
Q 030725           61 ILKKEPIRDSDKIGLEINEAR-----PHD---------------KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGR  120 (172)
Q Consensus        61 dle~s~~FY~~vLG~~~~~~~-----~~~---------------~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~  120 (172)
                      +-+++.+||+++||.++....     |.+               ....-++.+.+++..+.+.... +.    .+. .+.
T Consensus        12 ~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~-~~----~~~-~~~   85 (147)
T PRK10148         12 NCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAI-PS----GKA-HYS   85 (147)
T ss_pred             CHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCC-CC----cCC-CCC
Confidence            799999999999998875321     100               0111234567777655553321 11    011 112


Q ss_pred             cceEEEEECCHHH---HHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          121 DRHTCIAIRDVSK---LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       121 ~~Hi~f~V~dld~---~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ..++++.++|.++   +++.| +.|.++..+    .||.+...++||.|+.|.|...
T Consensus        86 ~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         86 GFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             eEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhccEEEECCCCCEEEEEec
Confidence            3578888888776   56666 477777632    6888889999999999999653

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.22  E-value=1.1e-05  Score=64.84  Aligned_cols=105  Identities=18%  Similarity=0.088  Sum_probs=67.6

Q ss_pred             cccC-CceeeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCC-CCCCCCCC
Q 030725           42 CRCN-GQFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL-SGRPEHGG  119 (172)
Q Consensus        42 ~~~~-~~~l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~-~~~p~~~g  119 (172)
                      ..|. .+.-++..|+.+.|.|++++.+||+++|||+.....+      ...|+..|+...|+....-.... ..++....
T Consensus       158 ~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~s~~~~~~~~~~~  231 (265)
T COG2514         158 EPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWNSRGARPRNANAS  231 (265)
T ss_pred             cccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccccCCCCCCCCCCC
Confidence            4444 5667778899999999999999999999999986312      24578888887777543311111 11222234


Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEE
Q 030725          120 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~  168 (172)
                      +...+.+.+++-..+...             +.+   ..||+|+.|.+.
T Consensus       232 GLa~~~i~~~~~~~l~~~-------------~~~---~~Dp~G~~i~~~  264 (265)
T COG2514         232 GLAWLEIHTPDPEKLDAT-------------GTR---LTDPWGIVIRVV  264 (265)
T ss_pred             CcceEEEEcCCccccccc-------------ccc---eecCCCceEEEe
Confidence            456777777754332210             111   189999999875

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.20  E-value=5.2e-06  Score=63.02  Aligned_cols=91  Identities=16%  Similarity=0.213  Sum_probs=51.4

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCC--CCCC------CCCCCcceEE
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPL--SGRP------EHGGRDRHTC  125 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~--~~~p------~~~g~~~Hi~  125 (172)
                      |+.+.|+|++++.++|++.|||.+.....+...+.....+.+++..|+|+........  .++.      ..+.+..++|
T Consensus         3 H~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~   82 (175)
T PF13468_consen    3 HLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYGWA   82 (175)
T ss_dssp             EEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEEEE
T ss_pred             EEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEEEE
Confidence            7888999999999999999999987643322234455666677668999875321111  1111      1234567899


Q ss_pred             EEECCHHHHHHHHHHCCCe
Q 030725          126 IAIRDVSKLKMILDKAGIS  144 (172)
Q Consensus       126 f~V~dld~~~~~L~~~Gv~  144 (172)
                      +.++|+++..++|++.|+.
T Consensus        83 l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   83 LRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EE-S-HHHHHHHHHTTT-E
T ss_pred             EecCCHHHHHHHHHhcCCC
Confidence            9999999999999999985

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.17  E-value=1.3e-05  Score=68.58  Aligned_cols=98  Identities=10%  Similarity=-0.048  Sum_probs=63.8

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCC--CCCc---ceEEEEeCC--eEEEEEecCCC--CCCC-C---CC
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHD--KLPY---RGAWLWVGA--EMIHLMELPNP--DPLS-G---RP  115 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~--~~~~---~~~~~~~g~--~~l~L~~~~~~--~~~~-~---~p  115 (172)
                      |+..-|+++.+.+++.+..||+++|||+........  ...+   ....+..++  ..+.|.+....  .... .   ..
T Consensus       178 l~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g~v~ipLnEP~~~~~~~SqI~eFL~~  257 (398)
T PLN02875        178 LRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNEMVLLPLNEPTFGTKRKSQIQTYLEH  257 (398)
T ss_pred             cceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCCcEEEEeccCCCCCCCcChHHHHHHh
Confidence            444557888889999999999999999886422110  1111   223344443  35666553211  1110 0   01


Q ss_pred             CCCCCcceEEEEECCHHHHHHHHHHC----CCeEE
Q 030725          116 EHGGRDRHTCIAIRDVSKLKMILDKA----GISYT  146 (172)
Q Consensus       116 ~~~g~~~Hi~f~V~dld~~~~~L~~~----Gv~i~  146 (172)
                      ..+.+.+||||.++|+.+.+++|+++    |+++.
T Consensus       258 ~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL  292 (398)
T PLN02875        258 NEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFM  292 (398)
T ss_pred             cCCCCeeEEEeecCCHHHHHHHHHhccccCCeecC
Confidence            12457899999999999999999999    99886

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=97.94  E-value=0.00039  Score=49.66  Aligned_cols=108  Identities=13%  Similarity=0.066  Sum_probs=56.6

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC--CeEEEEEecCCCCCCCCCCCC-CCCcceEEEEECC
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEH-GGRDRHTCIAIRD  130 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g--~~~l~L~~~~~~~~~~~~p~~-~g~~~Hi~f~V~d  130 (172)
                      +..+.|+|-+...+||+++|||+...+.      ...++|...  ...+-|-+-|...   .++.. .-...++-+.|++
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EE------na~a~lg~~~~~erlvlEESP~~r---tr~V~G~KKl~~ivIkv~~   73 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEE------NALAILGDQQKEERLVLEESPSMR---TRAVEGPKKLNRIVIKVPN   73 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEE------TTEEEEE-TT--EEEEEEE--TTT----B--SSS-SEEEEEEEESS
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeecc------ccEEEecCCCCceEEEEecCCccc---cccccCcceeeEEEEEcCC
Confidence            3567789999999999999999997531      133454432  2234443443221   11111 1246789999998


Q ss_pred             HHHHHHHHHHCCCeEEe--cCCCceEEEEECCCCCEEEEEeec
Q 030725          131 VSKLKMILDKAGISYTL--SKSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~--~~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      .+++-+. .++|..+..  ....+.++-..+|+|+.+.++..+
T Consensus        74 ~~EIe~L-Lar~~~~~~l~kg~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   74 PKEIEAL-LARGAQYDRLYKGKNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HHHHHHH-HHC-S--SEEEE-SSSEEEEEE-TT--EEEEE--S
T ss_pred             HHHHHHH-HhcccccceeEEcCCceEEEEECCCCCEEEEEEcC
Confidence            7666543 344444321  123346777789999999998654

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=97.01  E-value=0.051  Score=38.64  Aligned_cols=102  Identities=16%  Similarity=0.080  Sum_probs=59.9

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEee---ecCCCCC----CcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINE---ARPHDKL----PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  125 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~---~~~~~~~----~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~  125 (172)
                      .++... .+-++|.+||.++||-....   ..|+...    ..-.+.+.+++..+...... +.    . . .+....++
T Consensus         5 pyL~F~-g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~-~~----~-~-~~~~~sl~   76 (116)
T PF06983_consen    5 PYLWFN-GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGG-PD----F-P-FGNNISLC   76 (116)
T ss_dssp             EEEEES-S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEES-TS----------TTEEEE
T ss_pred             EEEEeC-CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCC-CC----C-C-CCCcEEEE
Confidence            334443 57899999999999843322   1221111    11234577777777665443 11    0 1 12236788


Q ss_pred             EEECCHH---HHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEE
Q 030725          126 IAIRDVS---KLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       126 f~V~dld---~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~  168 (172)
                      +.++|.+   ++.++|.+-|-     +++ ....+.|.-|..|.|+
T Consensus        77 i~~~~~ee~~~~f~~Ls~gG~-----~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   77 IECDDEEEIDRIFDKLSEGGQ-----WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EEESSHHHHHHHHHHHHTTTE-----TCC-EEEEEE-TTS-EEEEE
T ss_pred             EEcCCHHHHHHHHHHHHcCCC-----ccc-eeEEEEeCCCCEEEeC
Confidence            8888754   56778877775     334 7789999999999875

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=96.99  E-value=0.0046  Score=51.75  Aligned_cols=90  Identities=17%  Similarity=0.185  Sum_probs=54.7

Q ss_pred             eeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEE---EEe--CCeEEEEEecCCCCCCCC---CCCCCCCcceEEEE
Q 030725           56 SVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAW---LWV--GAEMIHLMELPNPDPLSG---RPEHGGRDRHTCIA  127 (172)
Q Consensus        56 ~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~---~~~--g~~~l~L~~~~~~~~~~~---~p~~~g~~~Hi~f~  127 (172)
                      .+....++.+..||+++|||+....... .....+..   +..  |..+|-|-+-.+.....+   +...+.+..||+|.
T Consensus       174 nv~~~~md~w~~FY~~if~~~~~~~fdi-~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~GIQHIA~~  252 (363)
T COG3185         174 NVKAGQMDTWVLFYESLFGFREIQYFDI-PGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGEGIQHIAFG  252 (363)
T ss_pred             hcchhhHHHHHHHHHHHhCccceeeEec-cCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCCcceEEEec
Confidence            4455779999999999999998652211 11122221   222  222333322111111000   11235567999999


Q ss_pred             ECCHHHHHHHHHHCCCeEE
Q 030725          128 IRDVSKLKMILDKAGISYT  146 (172)
Q Consensus       128 V~dld~~~~~L~~~Gv~i~  146 (172)
                      ++|+-+.+++|+++|+++.
T Consensus       253 T~dI~~tv~~lr~rG~~fl  271 (363)
T COG3185         253 TDDIYATVAALRERGVKFL  271 (363)
T ss_pred             ccHHHHHHHHHHHcCCccC
Confidence            9999999999999999885

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=96.90  E-value=0.0038  Score=43.35  Aligned_cols=50  Identities=18%  Similarity=0.125  Sum_probs=40.3

Q ss_pred             ceEEEEECCHHHHHHHHHH-CCCeEEe----cCCCceEEEEECCCC-CEEEEEeec
Q 030725          122 RHTCIAIRDVSKLKMILDK-AGISYTL----SKSGRPAIFTRDPDA-NALEFTQVD  171 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~~-~Gv~i~~----~~~g~~~~y~~DPDG-n~iEl~e~~  171 (172)
                      +|++|.|+|+++.++.+.+ .|+....    ...+.+..++..++| ..|||+++.
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~   56 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPL   56 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEES
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeC
Confidence            5999999999999999998 8987642    245667778888998 689999974

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=96.68  E-value=0.084  Score=45.42  Aligned_cols=118  Identities=15%  Similarity=0.084  Sum_probs=67.6

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCC--CCCCcceEEEEeCCeEEEEEecCCCCCC-------C--CCC------
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDPL-------S--GRP------  115 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~~~g~~~l~L~~~~~~~~~-------~--~~p------  115 (172)
                      .|+..++.|..++..||+..|||+.......  ++.......++-|+..+-+-....+...       .  ..+      
T Consensus         2 dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (398)
T PLN02875          2 HHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFSSDA   81 (398)
T ss_pred             eEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCCEEEEEeCCCCCccccccccccccccccccCcHH
Confidence            4678899999999999999999998653220  0011112223444433333221111000       0  000      


Q ss_pred             ------CCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC--------CC-ceEEEEECCCCCEEEEEee
Q 030725          116 ------EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK--------SG-RPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       116 ------~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~--------~g-~~~~y~~DPDGn~iEl~e~  170 (172)
                            .++.+..-+||+|+|.+++++++.++|......+        .| ....-|+-++|..+-|+++
T Consensus        82 a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr  151 (398)
T PLN02875         82 ARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSY  151 (398)
T ss_pred             HHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEcc
Confidence                  1233446699999999999999999999875321        11 1223355566666666553

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=96.65  E-value=0.0077  Score=49.86  Aligned_cols=98  Identities=19%  Similarity=0.224  Sum_probs=60.9

Q ss_pred             CceeeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEE----EEeCCeEEEEEecC-CCCCC-CC--CCCC
Q 030725           46 GQFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAW----LWVGAEMIHLMELP-NPDPL-SG--RPEH  117 (172)
Q Consensus        46 ~~~l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~----~~~g~~~l~L~~~~-~~~~~-~~--~p~~  117 (172)
                      ++++.+ .|+..+|.|-.++..||+..|||++...+.-  ......|    ++.|+. ..++..+ ++... .+  -+.+
T Consensus        13 g~~l~f-~Hi~F~vgna~q~A~~y~~~fGfep~A~~~l--etg~~~~~s~alr~g~~-vFv~~s~~~p~~~~~G~~l~~H   88 (381)
T KOG0638|consen   13 GKFLRF-HHIEFWVGNAKQAARWYCSGFGFEPLAYRGL--ETGSREWASHALRQGKI-VFVFNSAYNPDNSEYGDHLVKH   88 (381)
T ss_pred             cceeee-eEEEEEecCcHHHHHHHHhhcCCcchhcccc--cccchHHHHHHhhcCCE-EEEEecCCCCCchhhhhhhhhc
Confidence            444443 4799999999999999999999998753321  1111112    222322 2222221 22111 11  1233


Q ss_pred             CCCcceEEEEECCHHHHHHHHHHCCCeEEe
Q 030725          118 GGRDRHTCIAIRDVSKLKMILDKAGISYTL  147 (172)
Q Consensus       118 ~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~  147 (172)
                      +.+..-+||+|+|.+++.+.+.++|+.+..
T Consensus        89 gdgvkdvafeVeD~da~~~~~va~Ga~v~~  118 (381)
T KOG0638|consen   89 GDGVKDVAFEVEDADAIFQEAVANGAKVVR  118 (381)
T ss_pred             ccchhceEEEecchHHHHHHHHHcCCcccC
Confidence            334567999999999999999999998863

>PF15067 FAM124: FAM124 family

Probab=96.45  E-value=0.037  Score=43.99  Aligned_cols=96  Identities=15%  Similarity=0.140  Sum_probs=54.9

Q ss_pred             eeecC--ChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe---CCeEEEE--EecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           56 SVEGG--ILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV---GAEMIHL--MELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        56 ~i~~~--dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~---g~~~l~L--~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      .+.++  |.+.+++||+-+|+-+.....+    ++  .||.+   .+..+.|  -..+  ......|.   ...-+.|.|
T Consensus       133 tly~~~~N~~d~vr~Yelil~~~~~~~k~----~F--C~F~lys~~~~~iQlsLK~lp--~~~~p~p~---esavLqF~V  201 (236)
T PF15067_consen  133 TLYCSFDNYEDMVRFYELILQREPTQQKE----DF--CFFTLYSQPGLDIQLSLKQLP--PGMSPEPT---ESAVLQFRV  201 (236)
T ss_pred             EEEecCCCHHHHHHHHHHHhccCcceeeC----Cc--EEEEEecCCCeEEEEEeccCC--CCCCcccc---cceEEEEEe
Confidence            34444  9999999999999988865322    22  34443   2223333  2232  11111222   235799999


Q ss_pred             CCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEE
Q 030725          129 RDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEF  167 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl  167 (172)
                      .|+.+++-.|-.--.++.   .  ...-..|||||.|=|
T Consensus       202 ~~igqLvpLLPnpc~PIS---~--~rWqT~D~DGNkILL  235 (236)
T PF15067_consen  202 EDIGQLVPLLPNPCSPIS---E--TRWQTEDYDGNKILL  235 (236)
T ss_pred             cchhhhcccCCCCccccc---C--CcceeeCCCCCEecc
Confidence            999998654322211211   1  224678999999854

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=96.20  E-value=0.061  Score=39.64  Aligned_cols=113  Identities=9%  Similarity=-0.078  Sum_probs=61.0

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  132 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld  132 (172)
                      .++-+.+.+-+++..|+ +.|||+......    ......++-|+..+-|-..+..........++.+..-++|.|+|.+
T Consensus        11 dFvEFa~~~~~~l~~~~-~~lGF~~~a~hr----sk~v~l~rQG~I~~vln~ep~s~a~~~~~~HG~sv~aiafrV~Da~   85 (139)
T PF14696_consen   11 DFVEFAVPDAQALAQLF-TALGFQPVARHR----SKDVTLYRQGDINFVLNSEPDSFAAEFAAQHGPSVCAIAFRVDDAA   85 (139)
T ss_dssp             EEEEEE-SSTTSCHHHH-CCCCEEEECCEC----CCSEEEEEETTEEEEEEEESTSCHHHHHHHHSSEEEEEEEEES-HH
T ss_pred             EEEEEecCCHHHHHHHH-HHhCcceEEecC----CcceEEEEeCCEEEEEeCCCcchHHHHHHhcCCEEEEEEEEeCCHH
Confidence            35666778866666766 579999975322    1122334556654444222211000000123445577999999999


Q ss_pred             HHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEee
Q 030725          133 KLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       133 ~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +++++..++|.+....   ......-=|+-+.|-++-|++.
T Consensus        86 ~A~~rA~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVdr  126 (139)
T PF14696_consen   86 AAYERAVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVDR  126 (139)
T ss_dssp             HHHHHHHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE-
T ss_pred             HHHHHHHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEec
Confidence            9999999999987633   2223334455666666666654

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=94.02  E-value=0.33  Score=34.62  Aligned_cols=51  Identities=20%  Similarity=0.283  Sum_probs=36.5

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEecC---------------CCceEEEEECCCC-CEEEEEee
Q 030725          120 RDRHTCIAIRDVSKLKMILDKAGISYTLSK---------------SGRPAIFTRDPDA-NALEFTQV  170 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~---------------~g~~~~y~~DPDG-n~iEl~e~  170 (172)
                      +.+|+++.|+|+++..+...+.|.++....               .+....++..|+| -.|||.+.
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~iel~~~   69 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLELGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGHSRLELSKF   69 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHHcCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCCceEEEEEe
Confidence            468999999999999998888898764220               1123456666766 47898874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=93.13  E-value=0.086  Score=43.85  Aligned_cols=85  Identities=14%  Similarity=0.135  Sum_probs=52.9

Q ss_pred             ChHHHHHHhHhccCCEEeeecCCCCCC--cce--EEE-EeCCeEEEEEecCCCCCCCCC---------CCCCCCcceEEE
Q 030725           61 ILKKEPIRDSDKIGLEINEARPHDKLP--YRG--AWL-WVGAEMIHLMELPNPDPLSGR---------PEHGGRDRHTCI  126 (172)
Q Consensus        61 dle~s~~FY~~vLG~~~~~~~~~~~~~--~~~--~~~-~~g~~~l~L~~~~~~~~~~~~---------p~~~g~~~Hi~f  126 (172)
                      .++.+.+||.++|||..-...++...+  +..  .|+ ...+..+- +...++.++...         ...+.+..|+++
T Consensus       190 em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan~~esi~-mpinEp~~G~k~ksQIqeyv~y~gG~GvQHiaL  268 (381)
T KOG0638|consen  190 EMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLANYEESIK-MPINEPAPGKKKKSQIQEYVEYHGGAGVQHIAL  268 (381)
T ss_pred             cchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhcCCccEE-EeccCCCCCCccHHHHHHHHHhcCCCceeeeee
Confidence            589999999999999986644421111  111  111 11122233 333333333211         122456799999


Q ss_pred             EECCHHHHHHHHHHCCCeEE
Q 030725          127 AIRDVSKLKMILDKAGISYT  146 (172)
Q Consensus       127 ~V~dld~~~~~L~~~Gv~i~  146 (172)
                      .++|+-++++.++++|+++.
T Consensus       269 ~tedIi~Ai~~lr~rG~eFL  288 (381)
T KOG0638|consen  269 NTEDIIEAIRGLRARGGEFL  288 (381)
T ss_pred             cchHHHHHHHHHHhcCCccc
Confidence            99999999999999999986

>PF13670 PepSY_2: Peptidase propeptide and YPEB domain This Prosite motif covers only the active site

Probab=91.25  E-value=0.9  Score=30.03  Aligned_cols=40  Identities=18%  Similarity=0.225  Sum_probs=33.4

Q ss_pred             CHHHHHHHHHHCCCeEEe---cCCCceEEEEECCCCCEEEEEe
Q 030725          130 DVSKLKMILDKAGISYTL---SKSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~---~~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +.+++.+.|++.|+.+..   ...|...+...|.||+.+|+.=
T Consensus        30 ~~~~~~~~l~~~G~~v~~ve~~~~g~yev~~~~~dG~~~ev~v   72 (83)
T PF13670_consen   30 SIEQAVAKLEAQGYQVREVEFDDDGCYEVEARDKDGKKVEVYV   72 (83)
T ss_pred             CHHHHHHHHHhcCCceEEEEEcCCCEEEEEEEECCCCEEEEEE
Confidence            789999999999997763   2456778899999999999964

This is family M4 in the peptidase classification.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=90.63  E-value=1.2  Score=33.01  Aligned_cols=52  Identities=13%  Similarity=0.139  Sum_probs=37.3

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec-----C----C--------C-----ceEEEEECCCCCEEEEEeec
Q 030725          120 RDRHTCIAIRDVSKLKMILDK-AGISYTLS-----K----S--------G-----RPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~-----~----~--------g-----~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +..|+++.|.|+++.++-..+ .|.++...     .    .        |     .+..++.-++|..||+++..
T Consensus         4 ~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ieL~~~~   78 (162)
T TIGR03645         4 TFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDRIGVELFEFK   78 (162)
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCCCcEEEEecc
Confidence            468999999999999988866 68766310     0    0        1     23456666788889998864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=90.58  E-value=0.65  Score=32.34  Aligned_cols=87  Identities=17%  Similarity=0.198  Sum_probs=36.2

Q ss_pred             eeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC---CH
Q 030725           55 MSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR---DV  131 (172)
Q Consensus        55 ~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~---dl  131 (172)
                      +.+-|.| +++.+||+++||-+..         .          .+.+.+..+++........++ ...+-|.|+   |+
T Consensus         9 i~LNV~d-~~~~~fy~~~f~~~~~---------~----------~l~f~ea~G~DL~~~~~~twD-Le~Lkf~V~~~~Dl   67 (101)
T PF14507_consen    9 IELNVPD-AKSQSFYQSIFGGQLP---------F----------FLTFQEAQGPDLTIENNETWD-LEMLKFQVPKDFDL   67 (101)
T ss_dssp             EEEEE-T--T---S--H---HHHT---------T----------TEEEEE---CCGSS-TTSBSS-EEEEEEEES-S--H
T ss_pred             EEEeCCC-hhHHHHHHhccccCCC---------c----------eEEEeeccCCccccCCCcEEe-eEEEEEEecCcccH
Confidence            4555668 7899999999873221         1          122222222221111112222 356778888   67


Q ss_pred             HHHHHHHHHCCCeEEecCCCceEEEEECCCCCEE
Q 030725          132 SKLKMILDKAGISYTLSKSGRPAIFTRDPDANAL  165 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~i  165 (172)
                      .++.++|.+.+  +-..+ ..+.+-+.||.|..|
T Consensus        68 ~~L~~~le~~~--~fidK-k~k~l~~~Dps~IEl   98 (101)
T PF14507_consen   68 AALKSHLEEQE--FFIDK-KEKFLVTSDPSQIEL   98 (101)
T ss_dssp             HHHHHHTTTS---EE--T-T-SEEEEE-TTS-EE
T ss_pred             HHHHHHhcccc--eEecC-CceEEEEECCcceEE
Confidence            88999998833  33333 235777889988654

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=90.40  E-value=2.5  Score=28.63  Aligned_cols=50  Identities=16%  Similarity=0.046  Sum_probs=34.8

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec---CCCce-EEEEECCCCCEEEEEe
Q 030725          120 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---KSGRP-AIFTRDPDANALEFTQ  169 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~---~~g~~-~~y~~DPDGn~iEl~e  169 (172)
                      +.+|+++.|.|+++..+...+ .|..+...   ..+.. .+.+..+++..+|+..
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~   57 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFS   57 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEE
Confidence            358999999999999998875 79887633   11112 2334456777888765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=89.79  E-value=1.8  Score=29.88  Aligned_cols=49  Identities=14%  Similarity=0.174  Sum_probs=33.3

Q ss_pred             cceEEEEECCHHHHHHHHHHC----CCeEEecCCCceEEEEECCCCCEEEEEee
Q 030725          121 DRHTCIAIRDVSKLKMILDKA----GISYTLSKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~~----Gv~i~~~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .+|+++.|+|+++..+...+.    |.+......+ ...|+...++..|++.+.
T Consensus         2 i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~~-~~~~~~~~~~~~i~l~~~   54 (128)
T cd07242           2 IHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWED-GRSWRAGDGGTYLVLQQA   54 (128)
T ss_pred             CceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeecc-CceEEecCCceEEEEEec
Confidence            579999999999999888775    8877643212 223444345567777654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=88.90  E-value=2.2  Score=27.69  Aligned_cols=47  Identities=13%  Similarity=0.186  Sum_probs=36.1

Q ss_pred             eEEEEECCHHHHHHHHHH-CCCeEEecC--CCceEEEEECCCCCEEEEEee
Q 030725          123 HTCIAIRDVSKLKMILDK-AGISYTLSK--SGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       123 Hi~f~V~dld~~~~~L~~-~Gv~i~~~~--~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+.+.+.|+++..+.+.+ .|.......  .....+++.++ +..|+|.+.
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~   50 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLG-GTRLELFEG   50 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCCEEEEEEecC-CceEEEecC
Confidence            889999999999999987 898876543  23455666665 788888775

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=88.07  E-value=8  Score=32.79  Aligned_cols=102  Identities=13%  Similarity=0.061  Sum_probs=61.3

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEE-EeCCeEEEEEecCCCCCC--CCCCCCCCCcceEEEEECC
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWL-WVGAEMIHLMELPNPDPL--SGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~-~~g~~~l~L~~~~~~~~~--~~~p~~~g~~~Hi~f~V~d  130 (172)
                      ++-+.+.|.+.+..=|-..|||.......     ...+++ +-|+  +.|+-...+...  .....++....-++|.|+|
T Consensus        25 FvEf~~~d~~~~l~~l~~~lGF~~~~~Hr-----sk~v~l~rQGd--inlvvn~~~~s~a~~f~~~Hgps~~a~a~~V~D   97 (363)
T COG3185          25 FVEFAVPDPQEALGALLGQLGFTAVAKHR-----SKAVTLYRQGD--INLVVNAEPDSFAAEFLDKHGPSACAMAFRVDD   97 (363)
T ss_pred             EEEEecCCHHHHHHHHHHHhCcccccccc-----ccceeEEEeCC--EEEEEcCCCcchhhHHHHhcCCchheeEEeeCC
Confidence            57777888855555566689998864221     112332 3343  444433322110  0111344455789999999


Q ss_pred             HHHHHHHHHHCCCeEEec-------------CCCceEEEEECCCC
Q 030725          131 VSKLKMILDKAGISYTLS-------------KSGRPAIFTRDPDA  162 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~~-------------~~g~~~~y~~DPDG  162 (172)
                      .+.++++..+.|.+....             .-|..-+||-|++|
T Consensus        98 A~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185          98 AEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             HHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            999999999999944311             13456788888883

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.60  E-value=4.2  Score=27.57  Aligned_cols=50  Identities=20%  Similarity=0.251  Sum_probs=34.2

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEe----cCCCceEEEEECCCCCEEEEEee
Q 030725          121 DRHTCIAIRDVSKLKMILDK-AGISYTL----SKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~-~Gv~i~~----~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .+|+++.|+|+++..+-..+ .|.+...    ...+....|+.-.+|..+|+.+.
T Consensus         2 ~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   56 (125)
T cd07241           2 IEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTR   56 (125)
T ss_pred             ceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcC
Confidence            47999999999999888776 5777542    12333344554446778888753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=87.20  E-value=3.4  Score=30.51  Aligned_cols=50  Identities=10%  Similarity=0.096  Sum_probs=33.7

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEEC-CCCCEEEEEee
Q 030725          121 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRD-PDANALEFTQV  170 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~~g~~~~y~~D-PDGn~iEl~e~  170 (172)
                      .+|+++.|.|+++..+-..+ .|.++.....+...++..+ .+|..|++.+.
T Consensus         2 l~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   53 (157)
T cd08347           2 LHGVTLTVRDPEATAAFLTDVLGFREVGEEGDRVRLEEGGGGPGAVVDVLEE   53 (157)
T ss_pred             cccEEEEeCCHHHHHHHHHHhcCCEEEeeeCCEEEEEecCCCCCCEEEEEeC
Confidence            57999999999999988866 5887764332322222222 35788888764

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=87.13  E-value=2.8  Score=27.63  Aligned_cols=49  Identities=12%  Similarity=0.157  Sum_probs=33.1

Q ss_pred             ceEEEEECCHHHHHHHHH-HCCCeEEecC-CCceEEEEECCCCCEEEEEee
Q 030725          122 RHTCIAIRDVSKLKMILD-KAGISYTLSK-SGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~-~~Gv~i~~~~-~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +|+++.|+|+++..+... -.|....... ......++..+++..+++.+.
T Consensus         2 ~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~   52 (114)
T cd07245           2 DHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEE   52 (114)
T ss_pred             CeEEEecCCHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEec
Confidence            699999999999998886 4687765332 111334555555557787754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=86.28  E-value=5.4  Score=27.00  Aligned_cols=50  Identities=18%  Similarity=0.248  Sum_probs=35.3

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEec---CC--CceEEEEECC---CCCEEEEEee
Q 030725          121 DRHTCIAIRDVSKLKMILDK-AGISYTLS---KS--GRPAIFTRDP---DANALEFTQV  170 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~---~~--g~~~~y~~DP---DGn~iEl~e~  170 (172)
                      .+|+++.|+|+++..+...+ .|.+....   ..  +...+++.+.   .|..++|.+.
T Consensus         2 i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (126)
T cd08346           2 LHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEW   60 (126)
T ss_pred             cccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEec
Confidence            57999999999999998876 68877532   11  1234556655   5678888764

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=86.26  E-value=5.6  Score=27.72  Aligned_cols=50  Identities=12%  Similarity=0.167  Sum_probs=34.2

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECC--CCCEEEEEee
Q 030725          121 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDP--DANALEFTQV  170 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~~g~~~~y~~DP--DGn~iEl~e~  170 (172)
                      ..|+.+.|.|+++..+...+ .|.++.....+....|+..+  .+..+++.+.
T Consensus         2 i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   54 (134)
T cd08348           2 LSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITG   54 (134)
T ss_pred             eeEEEEEecCHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEec
Confidence            57999999999999998877 78887643322234555543  3456777653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=85.71  E-value=4.8  Score=26.87  Aligned_cols=47  Identities=13%  Similarity=0.157  Sum_probs=33.4

Q ss_pred             eEEEEECCHHHHHHHHHH-CCCeEEecC---CCceEEEEECCCC--CEEEEEe
Q 030725          123 HTCIAIRDVSKLKMILDK-AGISYTLSK---SGRPAIFTRDPDA--NALEFTQ  169 (172)
Q Consensus       123 Hi~f~V~dld~~~~~L~~-~Gv~i~~~~---~g~~~~y~~DPDG--n~iEl~e  169 (172)
                      |+++.|.|+++..+...+ .|.++....   .+...+++.++++  ..+++.+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   53 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAP   53 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeC
Confidence            899999999999998877 898876432   3444556667764  3555543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=84.07  E-value=5.6  Score=26.89  Aligned_cols=48  Identities=23%  Similarity=0.309  Sum_probs=33.8

Q ss_pred             ceEEEEECCHHHHHHHHHH-CCCeEEec---CC-CceEEEEECCC---CCEEEEEe
Q 030725          122 RHTCIAIRDVSKLKMILDK-AGISYTLS---KS-GRPAIFTRDPD---ANALEFTQ  169 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~~-~Gv~i~~~---~~-g~~~~y~~DPD---Gn~iEl~e  169 (172)
                      .|+++.|+|+++..+...+ .|.++...   .. +...+++..++   +..+++.+
T Consensus         2 ~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~   57 (121)
T cd07233           2 LHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTY   57 (121)
T ss_pred             eeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEe
Confidence            6999999999999999977 49887632   22 23334555554   57788764

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=83.78  E-value=7.4  Score=27.56  Aligned_cols=47  Identities=9%  Similarity=0.143  Sum_probs=32.0

Q ss_pred             ceEEEEECCHHHHHHHHHH-CCCeEEecC--CCceEEEEECCCCCEEEEEe
Q 030725          122 RHTCIAIRDVSKLKMILDK-AGISYTLSK--SGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~--~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +|+++.|+|+++..+..++ .|.++....  .+...+++. .++..+++.+
T Consensus         2 ~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~~~~~~~~-~g~~~l~l~~   51 (136)
T cd08342           2 DHVEFYVGNAKQLASWFSTKLGFEPVAYHGSEDKASYLLR-QGDINFVLNS   51 (136)
T ss_pred             eEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCceEEEEEE-cCCEEEEEec
Confidence            6999999999999999888 898876432  123334443 3344566654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=83.18  E-value=8.1  Score=26.36  Aligned_cols=47  Identities=6%  Similarity=0.063  Sum_probs=32.4

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCC-CCEEEEEe
Q 030725          121 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPD-ANALEFTQ  169 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~~g~~~~y~~DPD-Gn~iEl~e  169 (172)
                      ..|+.+.|+|+++..+...+ .|..+.....  ..+++..++ +..|.|.+
T Consensus         3 i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~--~~~~l~~~~~~~~l~l~~   51 (125)
T cd07255           3 IGAVTLRVADLERSLAFYQDVLGLEVLERTD--STAVLGTGGKRPLLVLEE   51 (125)
T ss_pred             EEEEEEEECCHHHHHHHHHhccCcEEEEcCC--CEEEEecCCCeEEEEEEe
Confidence            57999999999999998876 6888865422  234444443 45566654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=82.80  E-value=5.9  Score=27.05  Aligned_cols=25  Identities=16%  Similarity=0.300  Sum_probs=21.4

Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEE
Q 030725          122 RHTCIAIRDVSKLKMILDKAGISYT  146 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~~~Gv~i~  146 (172)
                      .|+++.|+|+++..+-.+..|.++.
T Consensus         2 ~~i~l~V~D~~~a~~FY~~LGf~~~   26 (122)
T cd07235           2 DAVGIVVADMAKSLDFYRRLGFDFP   26 (122)
T ss_pred             ceEEEEeccHHHHHHHHHHhCceec
Confidence            6999999999999888877887764

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=82.38  E-value=6.9  Score=26.60  Aligned_cols=48  Identities=17%  Similarity=0.183  Sum_probs=34.3

Q ss_pred             ceEEEEECCHHHHHHHHHH-CCCeEEec-C----CCceEEEEECCCCCEEEEEee
Q 030725          122 RHTCIAIRDVSKLKMILDK-AGISYTLS-K----SGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~~-~Gv~i~~~-~----~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+++.|+|+++..+...+ .|...... .    .+...+++. .+|..++|.+.
T Consensus         2 ~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~l~l~~~   55 (128)
T cd07249           2 DHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLG-LGNVQIELIEP   55 (128)
T ss_pred             cEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEE-cCCEEEEEEEE
Confidence            6999999999999998877 78877532 1    123345555 36778888765

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	172
2p25_A	126	Glyoxalase family protein; structural genomics, MC	2e-17
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	2e-17
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	6e-14
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	5e-11
1nki_A	135	Probable fosfomycin resistance protein; potassium	2e-09
3ghj_A	141	Putative integron gene cassette protein; integron	7e-09
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	9e-09
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	3e-07
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	5e-07
3huh_A	152	Virulence protein STM3117; structural genomics, ny	9e-07
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-06
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	6e-06
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	1e-05
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	2e-05
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	7e-05
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	2e-04
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	2e-04
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	7e-04
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-04

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 73.2 bits (180), Expect = 2e-17
 Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 5/103 (4%)

Query: 71  DKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 130
           +K+G E+       +       L +G++ + +            PE  G  RH    +  
Sbjct: 25  EKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSYPEALGL-RHLAFKVEH 83

Query: 131 VSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQ 169
           + ++   L++ GI     +    +G+   F  DPD   LE  +
Sbjct: 84  IEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE 126

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 72.9 bits (179), Expect = 2e-17
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 11/101 (10%)

Query: 71  DKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 130
           + IG+E    +P +     G W   G + IH+    N +P         +  H    +  
Sbjct: 32  ETIGMEEIP-KPEELKKRGGCWFKCGNQEIHIGVEQNFNP--------AKRAHPAFYVLK 82

Query: 131 VSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQ 169
           + + K  L K GI      +       +  DP  N +EF +
Sbjct: 83  IDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFME 123

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 64.0 bits (156), Expect = 6e-14
 Identities = 21/110 (19%), Positives = 32/110 (29%), Gaps = 11/110 (10%)

Query: 71  DKIGLEINEARPHDKLPYRGAWLWVGAEMIHLM-------ELPNPDPLSGRPEHGGRDRH 123
           +++G E+       K       L  G   + +            P      P      RH
Sbjct: 25  NQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREACGLRH 84

Query: 124 TCIAIRDVSKLKMILDKAGISYT----LSKSGRPAIFTRDPDANALEFTQ 169
               + DV   +  L   GI          +G+   F  DPD   LE  +
Sbjct: 85  LAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE 134

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 56.7 bits (137), Expect = 5e-11
 Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 12/100 (12%)

Query: 71  DKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR- 129
           + +GL ++           GA+L  G   + L            P       H    +  
Sbjct: 24  ELLGLTLHARWNT------GAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFTVAE 74

Query: 130 -DVSKLKMILDKAGISY-TLSKSGRPAIFTRDPDANALEF 167
            D   L   L++AG++    +KS   + +  DPD + LE 
Sbjct: 75  EDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLEL 114

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 52.1 bits (125), Expect = 2e-09
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 87  PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISY- 145
             +GA+L +G+  + L   P      G P          IA  D ++    L   G+   
Sbjct: 34  WDQGAYLELGSLWLCLSREPQY----GGPAADYTHYAFGIAAADFARFAAQLRAHGVREW 89

Query: 146 TLSKSGRPAIFTRDPDANALEF 167
             ++S   + +  DPD + LE 
Sbjct: 90  KQNRSEGDSFYFLDPDGHRLEA 111

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 50.8 bits (122), Expect = 7e-09
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 18/104 (17%)

Query: 71  DKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI-- 128
           + +G E        +  +   W+   A M+ L E           +   + +H    +  
Sbjct: 48  EILGFEAGLLDSARR--WNFLWVSGRAGMVVLQE----------EKENWQQQHFSFRVEK 95

Query: 129 RDVSKLKMILDKAGISYTLSKSGRP----AIFTRDPDANALEFT 168
            ++  LK  L+  G+S     +       +++  DP+ +ALEFT
Sbjct: 96  SEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFT 139

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 51.0 bits (122), Expect = 9e-09
 Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 7/100 (7%)

Query: 76  EINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEH-GGRDRHTCIAIRDVSK 133
           E+           + A        ++ L   P   P    PE    R  H    I     
Sbjct: 50  EVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPEKTFTRAYHLAFDIDPQLF 109

Query: 134 LKMI--LDKAGISYTLSKSGRP---AIFTRDPDANALEFT 168
            + +  + +  I+       RP    ++  DPD   +E  
Sbjct: 110 DRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIR 149

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 46.7 bits (111), Expect = 3e-07
 Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 10/99 (10%)

Query: 81  RPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDR-HTCIAIR---DVSK 133
               KLP +  +   G +M+ L +       D  +  P HG   + H C       +V +
Sbjct: 33  EMVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQGHFCFYADDKAEVDE 92

Query: 134 LKMILDKAGI---SYTLSKSGRPAIFTRDPDANALEFTQ 169
            K   +   I    Y    +G  +++ RDP  N++E  +
Sbjct: 93  WKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGE 131

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 45.4 bits (107), Expect = 9e-07
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 7/90 (7%)

Query: 87  PYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYT 146
                 L  GA+ I+L +              G      I    ++ +   + +AGIS  
Sbjct: 53  KQNRKALIFGAQKINLHQQEMEFEPKASRPTPGSADLCFITSTPINDVVSEILQAGISIV 112

Query: 147 LSKSGRP-------AIFTRDPDANALEFTQ 169
                R        +I+ RDPD N +E +Q
Sbjct: 113 EGPVERTGATGEIMSIYIRDPDGNLIEISQ 142

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 44.7 bits (106), Expect = 1e-06
 Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 7/102 (6%)

Query: 71  DKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 130
           + +  +       D   +       G   I L E              G D H   ++  
Sbjct: 25  EILDWKELVRGRGDTTSFAHGV-LPGGLSIVLREHDGGGTDLFDETRPGLD-HLSFSVES 82

Query: 131 VSKLKMI---LDKAGISYT--LSKSGRPAIFTRDPDANALEF 167
           ++ L ++   L KAG ++T          +  RD D  ALE 
Sbjct: 83  MTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEA 124

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 42.8 bits (101), Expect = 6e-06
 Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 10/109 (9%)

Query: 71  DKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP---LSGRPEHGGRDRHTCIA 127
           + +G +++EA P  +      ++ +G   + L+     D       +    G   H CI 
Sbjct: 25  NILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHICIE 84

Query: 128 IRDVSKLKMILDKAGISYT-----LSKSGRPAIF--TRDPDANALEFTQ 169
           + +++   M L K  I        +   G+P IF   +D     +E  Q
Sbjct: 85  VDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ 133

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 11/115 (9%), Positives = 27/115 (23%), Gaps = 11/115 (9%)

Query: 65  EPIRDSDKIGLEINEARPHDKLPYRGAWLWV--GAEMIHLMELPNPDPLSGRPEHGGRD- 121
                ++  G                A +    G   I L     P  ++          
Sbjct: 35  NLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHRTAPVNAL 94

Query: 122 --RHTCIAIRDVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEFTQ 169
                   + D+ ++   L K G    + +  +        + R  +   +   +
Sbjct: 95  GYLRVMFTVEDIDEMVSRLTKHGAE-LVGEVVQYENSYRLCYIRGVEGILIGLAE 148

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 41.5 bits (97), Expect = 2e-05
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 7/84 (8%)

Query: 91  AWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS 150
             L  G + I+L +L N      +    G      I    +S     ++  G++      
Sbjct: 44  IALEFGHQKINLHQLGNEFEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPV 103

Query: 151 GR-------PAIFTRDPDANALEF 167
            R        + + RDPD N +E 
Sbjct: 104 KRTGAQGAITSFYFRDPDGNLIEV 127

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 39.5 bits (92), Expect = 7e-05
 Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 10/103 (9%)

Query: 74  GLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS 132
           G   N+   +    +   +L       + +M   +    +     G    H  I+     
Sbjct: 26  GATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWA--HIAISTGTKE 83

Query: 133 KLKMI---LDKAGISYT----LSKSGRPAIFTRDPDANALEFT 168
            +  +   L + G +      ++  G       DP+ N +E T
Sbjct: 84  AVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT 126

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 7/103 (6%)

Query: 74  GLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD-PLSGRPEHGGRDRHTCIAIRDVS 132
            +E +E    +       ++  G   + L+     D P++   + G    H C  + D+ 
Sbjct: 30  YVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHICYEVEDIQ 89

Query: 133 KLKMILDKAGIS------YTLSKSGRPAIFTRDPDANALEFTQ 169
           K    + + G +         +   R   F    D   +E  +
Sbjct: 90  KSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLE 132

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 7/84 (8%)

Query: 91  AWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS 150
             L  G +  +L E+             G      I    + ++   L    +       
Sbjct: 61  KALCFGDQKFNLHEVGKEFEPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPV 120

Query: 151 GRP-------AIFTRDPDANALEF 167
            R        +I+ RDPD N +E 
Sbjct: 121 PRTGAKGPIMSIYFRDPDRNLIEV 144

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 37.2 bits (86), Expect = 7e-04
 Identities = 13/99 (13%), Positives = 27/99 (27%), Gaps = 11/99 (11%)

Query: 74  GLEINEARPHDKLP-YRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS 132
                 A   ++    R  +  +G   + +M+           E         I   D  
Sbjct: 27  DAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL------AERSYNHIAFKIDDADFD 80

Query: 133 KLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEF 167
           +    + K G+     +        +I+  D D +  E 
Sbjct: 81  RYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFEL 119

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 37.3 bits (86), Expect = 7e-04
 Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 21/115 (18%)

Query: 71  DKIGLEINEARPHDKLPYR---GAWLWVGAEMIHLMELPNPDPLSGRPEHG-GRDRHTCI 126
           D +G E+   RP ++  Y    G  +     M+  +   +   LSG  E   G   +   
Sbjct: 25  DVLGFEVKYERPDEEFVYLTLDGVDV-----MLEGIAGKSRKWLSGDLEFPLGSGVNFQW 79

Query: 127 AIRDVSKLKMILDKAGISYTL------------SKSGRPAIFTRDPDANALEFTQ 169
            + D+  L   ++++                  S + +     + PD     F Q
Sbjct: 80  DVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQ 134

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	172
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.87
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.84
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.83
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.83
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.82
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.82
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.82
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.81
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.81
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.8
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.8
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.8
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.8
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.79
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.79
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.79
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.79
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.79
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.79
2i7r_A	118	Conserved domain protein; structural genomics cons	99.79
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.78
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.78
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.78
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.78
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.78
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.78
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.78
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.78
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.77
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.77
3ghj_A	141	Putative integron gene cassette protein; integron	99.77
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.77
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.77
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.76
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.76
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.76
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.76
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.75
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.74
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.74
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.74
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.74
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.73
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.73
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.73
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.73
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.73
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.71
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.66
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.66
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.64
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.63
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.61
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.6
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.59
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.59
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.58
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.58
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.58
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.58
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.58
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.57
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.57
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.57
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.57
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.57
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.56
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.55
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.55
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.55
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.53
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.53
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.53
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.52
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.51
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.51
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.51
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.51
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.51
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.5
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.48
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.48
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.47
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.47
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.44
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.29
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.27
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.27
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.26
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.22
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.22
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.17
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.04
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.03
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.03
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.0
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.96
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.92
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.74
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.72
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.57
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	98.18
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.11
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	96.65
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	94.7
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	92.88
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	92.33
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	91.81
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	91.78
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	91.77
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	91.54
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	91.37
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	90.54
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	90.29
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	89.21
2p25_A	126	Glyoxalase family protein; structural genomics, MC	88.99
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	88.87
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	88.72
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	88.49
3ghj_A	141	Putative integron gene cassette protein; integron	88.15
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	86.51
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	85.09
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	84.8
3huh_A	152	Virulence protein STM3117; structural genomics, ny	84.57
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	84.5
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	84.49
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	82.89
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	82.03
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	81.76
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	80.93
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	80.69
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	80.12

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.87  E-value=5.8e-21  Score=134.67  Aligned_cols=118  Identities=19%  Similarity=0.155  Sum_probs=88.2

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEe-------cCCCCCCCCCCCCCCCcceE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLME-------LPNPDPLSGRPEHGGRDRHT  124 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~-------~~~~~~~~~~p~~~g~~~Hi  124 (172)
                      ..|+.+.|+|++++++||+++|||+...............++..++..++|+.       .+........+...++..|+
T Consensus         6 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   85 (134)
T 3l7t_A            6 VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREACGLRHL   85 (134)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCCSEEEEE
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCCCCeEEE
Confidence            45899999999999999999999999753321112222456777888888887       32221111122234456899


Q ss_pred             EEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          125 CIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       125 ~f~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +|.|+|+++++++|+++|+++...    .+|.+.+||+|||||.|||+|
T Consensus        86 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           86 AFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             EEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             EEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            999999999999999999998633    467789999999999999986

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.84  E-value=5.1e-20  Score=128.89  Aligned_cols=116  Identities=16%  Similarity=0.200  Sum_probs=84.5

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  132 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld  132 (172)
                      .|+.+.|+|++++++||+++||++...............++..++..++|+..+.+......+ ...+..|++|.|+|++
T Consensus         7 ~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~-~~~g~~~~~~~v~d~~   85 (126)
T 2p25_A            7 HHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSYP-EALGLRHLAFKVEHIE   85 (126)
T ss_dssp             CCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCCSS-CCSSCCCEEEECSCHH
T ss_pred             ceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCCCC-CCccceEEEEEeCCHH
Confidence            478888999999999999999999865321001111134577777788887654322111111 1234579999999999


Q ss_pred             HHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          133 KLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       133 ~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +++++|+++|+++...    .+|.+.+||+|||||.|||+|
T Consensus        86 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           86 EVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             HHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             HHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999999999987632    467789999999999999986

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.83  E-value=2.5e-19  Score=126.52  Aligned_cols=112  Identities=20%  Similarity=0.271  Sum_probs=86.1

Q ss_pred             EEeeeeec--CChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEG--GILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~--~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.+.+  +|++++++||+++|||+.....+ ........|+..++..++|...+..     .   .++..|++|.|+
T Consensus        11 i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~~~~l~l~~~~~~-----~---~~~~~~~~f~v~   81 (126)
T 2qqz_A           11 IDHVQVAAPVGCEEEARAFYGETIGMEEIPKPE-ELKKRGGCWFKCGNQEIHIGVEQNF-----N---PAKRAHPAFYVL   81 (126)
T ss_dssp             EEEEEEEECTTTHHHHHHHHTTTTCCEEECCCG-GGGGGCCEEEEETTEEEEEEECTTC-----C---CCSSSCEEEEET
T ss_pred             eeeEEEEcccccHHHHHHHHHhcCCCEEecCcc-cccCCCceEEEeCCEEEEEEecCCC-----C---CCCceEEEEEcC
Confidence            45777877  89999999999999999875211 0001235788888888887653211     1   134589999999


Q ss_pred             CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEeecC
Q 030725          130 DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVDG  172 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~~~  172 (172)
                      |+++++++|+++|+++...  .+|.+.+||+|||||.|||.++.|
T Consensus        82 d~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  126 (126)
T 2qqz_A           82 KIDEFKQELIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENKN  126 (126)
T ss_dssp             THHHHHHHHHHTTCCCEEECSSTTEEEEEEECTTSCEEEEEEECC
T ss_pred             CHHHHHHHHHHcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCCC
Confidence            9999999999999988643  467789999999999999999764

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.83  E-value=5.5e-20  Score=130.77  Aligned_cols=118  Identities=12%  Similarity=0.138  Sum_probs=87.3

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecC-CCCCCcceEEEEeCCeEEEEEecCCCCCCCCC-CCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARP-HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR-PEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~-~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~-p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.+.|+|++++++||+ +|||+...... ........+|+..++..++|++.......... ...+.+.+|+||.|+
T Consensus         8 i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   86 (133)
T 3hdp_A            8 VHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHICYEVE   86 (133)
T ss_dssp             EEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEEEEES
T ss_pred             eCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEEEEcC
Confidence            4589999999999999999 99999864211 01123345677788888998875432211000 011345679999999


Q ss_pred             CHHHHHHHHHHCCCeEEec------CCCceEEEEECCCCCEEEEEee
Q 030725          130 DVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+++++++|+++|+++...      .+|.+.+||+|||||.|||+|.
T Consensus        87 di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           87 DIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             CHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             CHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            9999999999999998631      3677899999999999999983

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.82  E-value=3.3e-19  Score=126.02  Aligned_cols=113  Identities=14%  Similarity=0.151  Sum_probs=85.7

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC-
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-  130 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d-  130 (172)
                      ..|+.+.|+|++++++||+++|||++....      ....++..++..+.|+.......... +....+..|++|.|+| 
T Consensus        11 i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~v~dd   83 (133)
T 3ey7_A           11 LDHLVLTVADIPTTTNFYEKVLGMKAVSFG------AGRIALEFGHQKINLHQLGNEFEPKA-QNVRVGSADLCFITDTV   83 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEET------TTEEEEEETTEEEEEEETTSCCSSCC-TTCCTTCCEEEEECSSC
T ss_pred             cCEEEEEECCHHHHHHHHHHccCceEEEec------CCeEEEEcCCEEEEEEcCCCCccccC-CCCCCCccEEEEEeCcH
Confidence            458899999999999999999999997632      13467788888888876543211111 1123345899999997 


Q ss_pred             HHHHHHHHHHCCCeEEec----C---CCceEEEEECCCCCEEEEEeec
Q 030725          131 VSKLKMILDKAGISYTLS----K---SGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~~----~---~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +++++++|+++|+++...    .   .+.+.+||+|||||.|||++..
T Consensus        84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  131 (133)
T 3ey7_A           84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYS  131 (133)
T ss_dssp             HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESC
T ss_pred             HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecC
Confidence            999999999999988632    1   1237899999999999999975

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.82  E-value=1.8e-19  Score=126.91  Aligned_cols=122  Identities=20%  Similarity=0.290  Sum_probs=88.0

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCC---CCCCCCCcceEE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSG---RPEHGGRDRHTC  125 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~---~p~~~g~~~Hi~  125 (172)
                      ++-..|+.+.|+|++++++||+++|||+.....+....+....|+..|+..++|+..........   .....++..|++
T Consensus         3 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~   82 (134)
T 3rmu_A            3 LGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHIC   82 (134)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEEE
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEEE
Confidence            34456899999999999999999999998652211112334567777888888876543221100   001234568999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEec-----CCCceEEEE--ECCCCCEEEEEee
Q 030725          126 IAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQV  170 (172)
Q Consensus       126 f~V~dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~--~DPDGn~iEl~e~  170 (172)
                      |.|+|+++++++|+++|+++...     .+|.+.+|+  +|||||.|||+|.
T Consensus        83 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           83 IEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            99999999999999999987532     356667777  8999999999973

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.82  E-value=3.4e-19  Score=125.18  Aligned_cols=114  Identities=15%  Similarity=0.138  Sum_probs=84.0

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC-
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD-  130 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d-  130 (172)
                      .|+.+.|+|++++++||+++|||+..........++...|+..+ +..++|++.+...+.. . ....+..|++|.|+| 
T Consensus         5 ~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~-~-~~~~g~~hi~~~v~d~   82 (127)
T 3e5d_A            5 EHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKT-T-GENLGWAHIAISTGTK   82 (127)
T ss_dssp             CEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCC-C-SSCSSCCCEEEECSSH
T ss_pred             EEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCC-C-cCCCceEEEEEEcCCH
Confidence            47889999999999999999999986531100123345566663 4578887665322111 1 123446899999999 


Q ss_pred             --HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEE
Q 030725          131 --VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       131 --ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~  168 (172)
                        +++++++|+++|+++...    .+|.+.+||+|||||.|||+
T Consensus        83 ~~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           83 EAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence              889999999999998642    46778899999999999996

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.81  E-value=1.3e-18  Score=123.42  Aligned_cols=115  Identities=18%  Similarity=0.228  Sum_probs=83.4

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~----~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      .|+.+.|+|++++++||+++|||++....+.....+..+|+..++    ..++|........   . ..+.+..|++|.|
T Consensus         4 ~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~-~~~~~~~~~~~~v   79 (135)
T 1f9z_A            4 LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK---Y-ELGTAYGHIALSV   79 (135)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCC---C-CCCSSEEEEEEEC
T ss_pred             eEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCc---c-cCCCCccEEEEEe
Confidence            578899999999999999999999875322111223445666653    4677765332111   1 1123457999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec----CCCc-eEEEEECCCCCEEEEEeec
Q 030725          129 RDVSKLKMILDKAGISYTLS----KSGR-PAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~----~~g~-~~~y~~DPDGn~iEl~e~~  171 (172)
                      +|+++++++|+++|+++...    .+|. +.+||+|||||.|||.+..
T Consensus        80 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~  127 (135)
T 1f9z_A           80 DNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             CCHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecC
Confidence            99999999999999998632    3554 6789999999999999863

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.81  E-value=2.1e-20  Score=137.47  Aligned_cols=118  Identities=16%  Similarity=0.138  Sum_probs=77.9

Q ss_pred             ceeeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe--C-C-e-EEEEEecCCCCCCCC---CCCCC
Q 030725           47 QFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV--G-A-E-MIHLMELPNPDPLSG---RPEHG  118 (172)
Q Consensus        47 ~~l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~--g-~-~-~l~L~~~~~~~~~~~---~p~~~  118 (172)
                      +.|+|. +++|.|+|+++|++||+++|||++..+.+.  .+  ..|+.+  . + . .+.+.... ..+...   .....
T Consensus        23 ~~Mri~-~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~--~~--~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~   96 (155)
T 4g6x_A           23 NAMRIH-LTNVFVDDQAKAESFYTGKLGFLVKADVPV--GA--DRWLTVVSPEAPDGTQLLLEPS-SHAAVTPFKEALVA   96 (155)
T ss_dssp             CCCCCC-EEEEEESCHHHHHHHHHHTTCCEEEEEEEE--TT--EEEEEEECTTCTTSCEEEEEEC-CSTTHHHHHHHHHH
T ss_pred             CceEEE-EEEEEeCCHHHHHHHHHHHhCCEEEEeecC--CC--ceEEEEeccCCCcceEEEeccC-CCcccccccccccc
Confidence            344443 678899999999999999999998764431  11  233322  1 1 1 12222221 111100   00012


Q ss_pred             CCcceEEEEECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEee
Q 030725          119 GRDRHTCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++..|++|.|+|+++++++|+++|+++..+   ..+.+.+||+|||||.|||+|.
T Consensus        97 ~g~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~  151 (155)
T 4g6x_A           97 DGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQI  151 (155)
T ss_dssp             TTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC
T ss_pred             CCceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEE
Confidence            345799999999999999999999998632   2334788999999999999996

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.81  E-value=1e-18  Score=126.62  Aligned_cols=119  Identities=13%  Similarity=0.145  Sum_probs=86.2

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCC------CCcceEEEEeCC-eEEEEEecCCCCCCCCCC-CCCCCcce
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDK------LPYRGAWLWVGA-EMIHLMELPNPDPLSGRP-EHGGRDRH  123 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~------~~~~~~~~~~g~-~~l~L~~~~~~~~~~~~p-~~~g~~~H  123 (172)
                      ..|+.|.|+|++++++||+++|||++........      .....+|+..++ ..++|+..+...+....+ ....+..|
T Consensus        20 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~h   99 (156)
T 3kol_A           20 VHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPEKTFTRAYH   99 (156)
T ss_dssp             CCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSSTTCCCSSCCE
T ss_pred             EeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCCCCCCCceEE
Confidence            4588999999999999999999999875211000      112346777765 678888765432211111 12345689


Q ss_pred             EEEEEC--CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          124 TCIAIR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       124 i~f~V~--dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +||.|+  |+++++++|+++|+++...    .+| +.+||+|||||.|||++..
T Consensus       100 ~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  152 (156)
T 3kol_A          100 LAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTG-RGVYFYDPDGFMIEIRCDP  152 (156)
T ss_dssp             EEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CC-EEEEEECTTSCEEEEEECC
T ss_pred             EEEEecHHHHHHHHHHHHHCCCccccCceecCCc-cEEEEECCCCCEEEEEecC
Confidence            999999  9999999999999998632    344 5899999999999999864

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.81  E-value=9.7e-19  Score=123.58  Aligned_cols=113  Identities=15%  Similarity=0.102  Sum_probs=82.8

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe--C--CeEEEEEecCCCCCCCCCCCCCCCcceEE
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV--G--AEMIHLMELPNPDPLSGRPEHGGRDRHTC  125 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~--g--~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~  125 (172)
                      .-..|+.+.|+|++++++||+++|||++....+.   .....|+.+  +  ...+++.......    .+...++..|++
T Consensus        12 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~~~~   84 (133)
T 4hc5_A           12 AYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQL---DPNMRFVTVVPPGAQTQVALGLPSWYE----DGRKPGGYTGIS   84 (133)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEE---ETTEEEEEEECTTCSCEEEEECGGGCS----SCCCSCEEEEEE
T ss_pred             cceeEEEEEECCHHHHHHHHHhCcCCcEeeeccc---CCCceEEEEECCCCceEEEEecCcccc----cccCCCCeEEEE
Confidence            3456889999999999999999999999763321   112345443  2  2356665543111    111234568999


Q ss_pred             EEECCHHHHHHHHHHCCCeEEe----cCCCceEEEEECCCCCEEEEEe
Q 030725          126 IAIRDVSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       126 f~V~dld~~~~~L~~~Gv~i~~----~~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      |.|+|+++++++|+++|+++..    ..+|.+.+||+|||||.|||+|
T Consensus        85 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           85 LITRDIDEAYKTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEESCHHHHHHHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             EEeCCHHHHHHHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999999999863    2567789999999999999987

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.80  E-value=3.9e-19  Score=130.64  Aligned_cols=120  Identities=13%  Similarity=0.111  Sum_probs=88.9

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCC--------------CCCcceEEEEeCCeEEEEEecCCCCCCCCC--C
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHD--------------KLPYRGAWLWVGAEMIHLMELPNPDPLSGR--P  115 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~--p  115 (172)
                      ..|++|.|+|++++++||+++|||++.......              ......+++..|+..++|++..........  .
T Consensus        20 i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~~~~~~~l~   99 (159)
T 3gm5_A           20 TVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPSTWREFLD   99 (159)
T ss_dssp             CEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSSCHHHHHHH
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCCChhHHHhh
Confidence            468999999999999999999999875421100              122345677888888999876422110000  0


Q ss_pred             CCCCCcceEEEEECCHHHHHHHHHHCCCeEEec--CCCceEEEEECCC--CCEEEEEeec
Q 030725          116 EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS--KSGRPAIFTRDPD--ANALEFTQVD  171 (172)
Q Consensus       116 ~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPD--Gn~iEl~e~~  171 (172)
                      ..+.+.+|+||.|+|+++++++|+++|+++...  .+|.+.+||+|||  |+.|||+|.+
T Consensus       100 ~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~~  159 (159)
T 3gm5_A          100 KNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY  159 (159)
T ss_dssp             HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEEC
T ss_pred             cCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEecC
Confidence            013357899999999999999999999998633  4678899999999  9999999974

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.80  E-value=1.3e-18  Score=125.88  Aligned_cols=114  Identities=17%  Similarity=0.209  Sum_probs=85.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~----~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      ..|+.+.|+|++++++||+++|||+...........+..+|+..++    ..++|++......   . ....+..|++|.
T Consensus         9 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~---~-~~~~~~~h~~f~   84 (144)
T 2c21_A            9 MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS---Y-KHDEAYGHIAIG   84 (144)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCC---C-CCCSSEEEEEEE
T ss_pred             eEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCC---C-CCCCCceEEEEE
Confidence            4578999999999999999999999875321001123346777764    4678876543211   1 112346899999


Q ss_pred             ECCHHHHHHHHHHCCCeEEecCCCceEE-EEECCCCCEEEEEee
Q 030725          128 IRDVSKLKMILDKAGISYTLSKSGRPAI-FTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~dld~~~~~L~~~Gv~i~~~~~g~~~~-y~~DPDGn~iEl~e~  170 (172)
                      |+|+++++++|+++|+++... +|.+.+ ||+|||||.|||++.
T Consensus        85 v~d~~~~~~~l~~~G~~~~~~-~g~~~~~~~~DPdG~~iel~~~  127 (144)
T 2c21_A           85 VEDVKELVADMRKHDVPIDYE-DESGFMAFVVDPDGYYIELLNE  127 (144)
T ss_dssp             ESCHHHHHHHHHHTTCCEEEE-CSSSSEEEEECTTSCEEEEEEH
T ss_pred             eCCHHHHHHHHHHCCCEEecc-CCcEEEEEEECCCCCEEEEEEc
Confidence            999999999999999998866 666555 999999999999875

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.80  E-value=3.8e-19  Score=127.32  Aligned_cols=117  Identities=21%  Similarity=0.079  Sum_probs=83.8

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE---
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI---  128 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V---  128 (172)
                      ..++.+.|+|++++++||+++|||++....+.....+...++. ++..+.|++.......... ....+..|++|.|   
T Consensus         6 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~-~~~~g~~h~~f~v~~~   83 (136)
T 2rk0_A            6 VSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-GGLSIVLREHDGGGTDLFD-ETRPGLDHLSFSVESM   83 (136)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-TSCEEEEEEETTCSSSCCC-TTSSEEEEEEEEESSH
T ss_pred             ccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-CCCEEEEEeCCCCcccCCC-CCCCCcceEEEEeCCH
Confidence            4589999999999999999999999875332111112233344 6667888766432111111 1223457999999   


Q ss_pred             CCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEeec
Q 030725          129 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +|+++++++|+++|+++...   .+| +.+||+|||||.|||.+..
T Consensus        84 ~d~~~~~~~l~~~G~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  128 (136)
T 2rk0_A           84 TDLDVLEERLAKAGAAFTPTQELPFG-WILAFRDADNIALEAMLGR  128 (136)
T ss_dssp             HHHHHHHHHHHHHTCCBCCCEEETTE-EEEEEECTTCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHCCCcccCccccCCc-eEEEEECCCCCEEEEEEcC
Confidence            78999999999999987632   355 8899999999999999864

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.79  E-value=2.4e-18  Score=123.44  Aligned_cols=109  Identities=21%  Similarity=0.209  Sum_probs=80.0

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHH
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVS  132 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld  132 (172)
                      ....|.|+|++++++||+++|||++....+      ..+++..++..++|.......   ..|. .+...|++|.|+|++
T Consensus         9 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~~~l~l~~~~~~~---~~~~-~~~~~~l~~~v~dv~   78 (134)
T 3fcd_A            9 ITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARK---IIPD-GIARVAICIDVSDID   78 (134)
T ss_dssp             EEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECCCC-------------EEEEEECSCHH
T ss_pred             ceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECCEEEEEEeCCCCC---cCCC-CCceEEEEEEeCCHH
Confidence            346778899999999999999999976432      246777888888887654221   1122 223479999999999


Q ss_pred             HHHHHHHHCCC----eEE----ecCCCceEEEEECCCCCEEEEEeec
Q 030725          133 KLKMILDKAGI----SYT----LSKSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       133 ~~~~~L~~~Gv----~i~----~~~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +++++|+++|+    ++.    ...+|.+.+||+|||||.|||.+..
T Consensus        79 ~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (134)
T 3fcd_A           79 SLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPL  125 (134)
T ss_dssp             HHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcc
Confidence            99999996654    322    2357878999999999999999864

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.79  E-value=3.3e-18  Score=122.59  Aligned_cols=114  Identities=18%  Similarity=0.137  Sum_probs=82.5

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcc-eEEEEECCH
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR-HTCIAIRDV  131 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~-Hi~f~V~dl  131 (172)
                      ..+.|.|+|++++++||+++|||++....+. ......+.+..++..+.|.........  .+. ++... |++|.|+|+
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~-~g~~~~~~l~~~~~~l~l~~~~~~~~~--~~~-~~~~~~~~~~~v~dv   79 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPA-IGTIRHADLDTGGGIVMVRRTGEPYTV--SCA-GGHTCKQVIVWVSDV   79 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESS-SSSCSEEEEECSSSEEEEEETTCCSSC--EEC-CCCCCCEEEEEESCH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecC-CCcEEEEEEecCCeEEEEEecCCCcCc--cCC-CCCcEEEEEEEeCCH
Confidence            3567888999999999999999999764332 111223445557767777543211110  111 22334 999999999


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          132 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++++++|+++|+++...    .+|.+.+||+|||||.|||.+.
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  122 (137)
T 3itw_A           80 DEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRH  122 (137)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEEC
T ss_pred             HHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEE
Confidence            99999999999998632    5777899999999999999985

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.79  E-value=7.3e-18  Score=120.60  Aligned_cols=108  Identities=19%  Similarity=0.221  Sum_probs=84.9

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC-
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  129 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~-  129 (172)
                      -..|+.+.|+|++++++||+++||++.....+      ...|+..++..+.|...+..      +...++..|++|.|+ 
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~------~~~~~~~~h~~~~v~~   71 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQY------GGPAADYTHYAFGIAA   71 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTC------CCCCSSSCEEEEEECH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCCEEEEEEeCCCC------CCCCCCcceEEEEccH
Confidence            35688999999999999999999999875322      24678888877777654311      112234589999998 


Q ss_pred             -CHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCEEEEEee
Q 030725          130 -DVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 -dld~~~~~L~~~Gv~i~~~-~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                       |+++++++|+++|+++... ..+.+.+||+|||||.|||.+.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~  114 (135)
T 1nki_A           72 ADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (135)
T ss_dssp             HHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             HHHHHHHHHHHHCCCceecCCCCCeEEEEEECCCCCEEEEEEC
Confidence             9999999999999998744 3356789999999999999875

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.79  E-value=5.2e-18  Score=123.56  Aligned_cols=113  Identities=18%  Similarity=0.183  Sum_probs=85.1

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC-
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  129 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~-  129 (172)
                      -..|+.+.|+|++++++||+++|||++... .     ....++..++..++|............ ....+..|++|.++ 
T Consensus        23 ~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~-~-----~~~~~l~~~~~~l~l~~~~~~~~~~~~-~~~~g~~hi~f~~~~   95 (152)
T 3huh_A           23 RIDHLVLTVSDISTTIRFYEEVLGFSAVTF-K-----QNRKALIFGAQKINLHQQEMEFEPKAS-RPTPGSADLCFITST   95 (152)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEE-T-----TTEEEEEETTEEEEEEETTBCCSSCCS-SCCTTCCEEEEEESS
T ss_pred             eeeEEEEEeCCHHHHHHHHHhcCCCEEEEc-c-----CCeEEEEeCCeEEEEeccCCcCCCcCc-CCCCCccEEEEEecC
Confidence            346899999999999999999999999763 2     135678888888888765432111111 11234579999987 


Q ss_pred             CHHHHHHHHHHCCCeEEec----CC--C-ceEEEEECCCCCEEEEEee
Q 030725          130 DVSKLKMILDKAGISYTLS----KS--G-RPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~----~~--g-~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+++++++|+++|+++...    .+  | .+.+||+|||||.|||++.
T Consensus        96 dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~  143 (152)
T 3huh_A           96 PINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQY  143 (152)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             CHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEec
Confidence            9999999999999987532    22  2 3789999999999999985

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.79  E-value=3.2e-18  Score=122.16  Aligned_cols=108  Identities=15%  Similarity=0.000  Sum_probs=81.6

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d  130 (172)
                      ..++.+.|+|++++++||+++|||++....+      ..+++..+ +..+.|+....+.     +...++..|++|.|+|
T Consensus        14 i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~v~~   82 (132)
T 3sk2_A           14 PNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSGDALFAIWSGGEEP-----VAEIPRFSEIGIMLPT   82 (132)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECSTTCEEEEESSSCCC-----CTTSCCCEEEEEEESS
T ss_pred             eeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCCCcEEEEEeCCCCC-----cCCCCCcceEEEEeCC
Confidence            4578999999999999999999999875322      23345544 4577776554111     1112345799999986


Q ss_pred             ---HHHHHHHHHH---CCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          131 ---VSKLKMILDK---AGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       131 ---ld~~~~~L~~---~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                         +++++++|++   +|+++...    .+| +.+||+|||||.|||++++
T Consensus        83 ~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g-~~~~~~DPdGn~iel~~~d  132 (132)
T 3sk2_A           83 GEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG-RTFLISDPDGHIIRVCPLD  132 (132)
T ss_dssp             HHHHHHHHHHHHHCSSSCCEEEEEEEEETTE-EEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHhhhcCCCEEeeCCcccCce-EEEEEECCCCCEEEEEeCC
Confidence               9999999999   99998632    466 8899999999999999864

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.79  E-value=7e-18  Score=119.46  Aligned_cols=106  Identities=17%  Similarity=0.167  Sum_probs=82.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      ..++.+.|+|++++++||++ ||+++... .   .  ..+++..++..++|+..+..     .+  .+...|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~-~---~--~~~~~~~~~~~l~l~~~~~~-----~~--~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFR-D---A--GWMILQRGDLMLEFFAHPGL-----DP--LASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEE-C---S--SEEEEEETTEEEEEEECTTC-----CG--GGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEec-C---C--CEEEEEeCCEEEEEEeCCCC-----CC--CCcceEEEEEECCH
Confidence            45788899999999999998 99999753 1   1  23456778778888654321     11  12357999999999


Q ss_pred             HHHHHHHHHCCCeE-------E-e---cCCCceEEEEECCCCCEEEEEeec
Q 030725          132 SKLKMILDKAGISY-------T-L---SKSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       132 d~~~~~L~~~Gv~i-------~-~---~~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ++++++|+++|+++       . .   ..+|.+.+||+|||||.|||.+..
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  120 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  120 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecch
Confidence            99999999999983       3 2   246778999999999999999863

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.79  E-value=3.5e-18  Score=119.27  Aligned_cols=109  Identities=15%  Similarity=0.132  Sum_probs=81.2

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      ..|+.+.|+|++++++||+++||+++....+      ..+++..++..+.+.... ..+.   .. .+...|++|.|+|+
T Consensus         6 i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~l~l~~~~-~~~~---~~-~~~~~~~~~~v~d~   74 (118)
T 2i7r_A            6 LNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNH-LVPL---EN-FQSGIIIHIEVEDV   74 (118)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSC-SSSC---CC-CCSCEEEEEECSCH
T ss_pred             eeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC------CEEEEEeCCeEEEEEcCC-CCCc---cc-CCCeEEEEEEECCH
Confidence            3568899999999999999999999865221      245677777766553211 1110   11 12335899999999


Q ss_pred             HHHHHHHHHCCCeEEe----cCCCceEEEEECCCCCEEEEEeec
Q 030725          132 SKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~----~~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ++++++|+++|+++..    ..+|.+.+||+|||||.|||++.+
T Consensus        75 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  118 (118)
T 2i7r_A           75 DQNYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRMK  118 (118)
T ss_dssp             HHHHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEECC
T ss_pred             HHHHHHHHHCCCceecCCccccCccEEEEEECCCccEEEEEecC
Confidence            9999999999999852    246778999999999999999863

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.78  E-value=7.7e-18  Score=121.33  Aligned_cols=110  Identities=21%  Similarity=0.249  Sum_probs=85.4

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~--  129 (172)
                      ..|+.+.|+|++++++||+++|||++....+      ...|+..++..+.|.......+   .+....+..|++|.|+  
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~~hi~~~v~~~   75 (141)
T 1npb_A            5 LNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFTVAEE   75 (141)
T ss_dssp             EEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEECCHH
T ss_pred             EEEEEEEeCCHHHHHHHHHhccCCEEEeecC------CcEEEEECCEEEEEEECCCCCC---CCCCCCCceEEEEEeCHH
Confidence            4688999999999999999999999975322      2467888887787765542111   1112234689999997  


Q ss_pred             CHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCEEEEEee
Q 030725          130 DVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~-~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+++++++|+++|+++... ..+.+.+||+|||||.|||++.
T Consensus        76 d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~  117 (141)
T 1npb_A           76 DFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (141)
T ss_dssp             HHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHCCCeEeccCCCceeEEEEECCCCCEEEEEEC
Confidence            9999999999999998744 3456899999999999999985

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.78  E-value=4.4e-18  Score=123.09  Aligned_cols=122  Identities=13%  Similarity=0.102  Sum_probs=85.8

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCC-----------CCCCcceEEEEeCC--eEEEEEecCCCCCC---C
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPH-----------DKLPYRGAWLWVGA--EMIHLMELPNPDPL---S  112 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~~~~g~--~~l~L~~~~~~~~~---~  112 (172)
                      +.-..|+.+.|+|++++++||++ |||+.....+.           .......+++..++  ..++|++...+...   .
T Consensus         9 ~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~   87 (153)
T 1ss4_A            9 LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHR   87 (153)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCT
T ss_pred             ccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCccccc
Confidence            34456899999999999999999 99998642210           00122345667643  57777764211111   0


Q ss_pred             CCCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          113 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       113 ~~p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ..+....+.+|++|.|+|+++++++|+++|+++...    .+|.+.+||+|||||.|||++..
T Consensus        88 ~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           88 TAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             TCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             CCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEecc
Confidence            011122345699999999999999999999998632    36778999999999999999864

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.78  E-value=3.1e-18  Score=128.96  Aligned_cols=120  Identities=13%  Similarity=0.096  Sum_probs=83.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC-------------------eEEEEEecCCCC--C
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPNPD--P  110 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~-------------------~~l~L~~~~~~~--~  110 (172)
                      ..|+.+.|+|++++++||+++|||+.....+.....+...++..++                   ..++|+......  +
T Consensus        35 l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~  114 (187)
T 3vw9_A           35 LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDE  114 (187)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGGGCT
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCCCCC
Confidence            4578999999999999999999999876332112233344444432                   467775433211  0


Q ss_pred             CCC---CCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCEEEEEeec
Q 030725          111 LSG---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       111 ~~~---~p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~---~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ...   ......+.+|++|.|+|+++++++|+++|+++....   .+.+.+||+|||||.|||++..
T Consensus       115 ~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          115 TQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             TCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGG
T ss_pred             ccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEcc
Confidence            000   001123568999999999999999999999997542   2234689999999999999864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.78  E-value=3e-19  Score=132.04  Aligned_cols=120  Identities=14%  Similarity=0.178  Sum_probs=87.8

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCC--CCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGR--PEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~--p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.|.|+|++++++||+++|||+..........+...+|+..|+..++|++..........  ...+.+..|+||.|+
T Consensus         9 i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hiaf~V~   88 (161)
T 3oa4_A            9 LDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHIAIGVK   88 (161)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEEEEECS
T ss_pred             CCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEEEEEEC
Confidence            458999999999999999999999987532211123345677888888898875432210000  011245789999999


Q ss_pred             CHHHHHHHHHHCCCeEEec-----CCCceEEEE--ECCCCCEEEEEeec
Q 030725          130 DVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQVD  171 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~--~DPDGn~iEl~e~~  171 (172)
                      |+++++++|+++|+++...     .+|.+.+|+  +|||||.|||++..
T Consensus        89 Did~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~  137 (161)
T 3oa4_A           89 SIEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKK  137 (161)
T ss_dssp             CHHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECC
T ss_pred             CHHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecC
Confidence            9999999999999998532     346667777  49999999999864

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.78  E-value=8.7e-18  Score=118.79  Aligned_cols=104  Identities=12%  Similarity=0.057  Sum_probs=81.5

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      ..++.+.|+|++++++||+++|||++... .   .  ..+++..++..++|...+..      +  .+...|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~-~---~--~~~~~~~~~~~l~l~~~~~~------~--~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFV-E---D--DFAGVVRDDVTLFISAVQDQ------V--VPDNTQAWVWVRGL   71 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEE-C---S--SEEEEEETTEEEEEEECSCT------T--TGGGCEEEEEEECH
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEec-C---C--CEEEEEECCEEEEEEcCCCC------C--CCCceEEEEEECCH
Confidence            35788999999999999999999999753 2   1  23456677777887654321      1  12346999999999


Q ss_pred             HHHHHHHHHC------CC--eEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          132 SKLKMILDKA------GI--SYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       132 d~~~~~L~~~------Gv--~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++++++|+++      |+  ++..+    .+| +.+||+|||||.|||.+.
T Consensus        72 ~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  121 (124)
T 1xrk_A           72 DELYAEWSEVVSTNFRDASGPAMTEIVEQPWG-REFALRDPAGNCVHFVAE  121 (124)
T ss_dssp             HHHHHHHTTTSBSCTTTCSSCEECCCEEETTE-EEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHhcccccCCccccccCCceecCCC-CEEEEECCCCCEEEEEEe
Confidence            9999999999      99  76532    466 899999999999999985

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.78  E-value=5.8e-18  Score=121.70  Aligned_cols=110  Identities=13%  Similarity=0.119  Sum_probs=82.8

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcc---eEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYR---GAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~---~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      -..|+.+.|+|++++++||+++|||++....+  ...+.   ..|+..|+..+++++.+..      +  .++..|++|.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~g~~~l~l~~~~~~------~--~~~~~h~~~~   73 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASD--TEQFSLSREKFFLIGDIWVAIMQGEKL------A--ERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGG--GSTTCCSCEEEEEETTEEEEEEECCCC------S--SCCSCEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCC--CccccccceEEEEECCEEEEEEeCCCC------C--CCCeeEEEEE
Confidence            35689999999999999999999999875322  11111   1277778877887654311      1  2345899999


Q ss_pred             EC--CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          128 IR--DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~--dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+  |+++++++|+++|+++...    .++.+.+||+|||||.|||.+.
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           74 IDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             CCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeC
Confidence            99  9999999999999988643    3467889999999999999874

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.78  E-value=7.3e-18  Score=120.42  Aligned_cols=109  Identities=16%  Similarity=0.134  Sum_probs=78.4

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEE-eCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~-~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d  130 (172)
                      ..|+.|.|+|++++++||++ |||+......   .....+++. .++..+.|...+...     +. .+...|++|.|+|
T Consensus         7 i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~---~~~~~~~~~~~~~~~l~l~~~~~~~-----~~-~~~~~~l~f~v~d   76 (128)
T 3g12_A            7 ITSITINTSHLQGMLGFYRI-IGFQFTASKV---DKGSEVHRAVHNGVEFSLYSIQNPQ-----RS-QIPSLQLGFQITD   76 (128)
T ss_dssp             EEEEEEEESCHHHHHHHHHH-HTCCCEEC--------CCEEEEEETTEEEEEEECCCCS-----SC-CCCSEEEEEEESC
T ss_pred             EEEEEEEcCCHHHHHHHHHH-CCCEEecccC---CCCCEEEEEeCCCeEEEEEECCCCc-----CC-CCCceEEEEEeCC
Confidence            45899999999999999999 9999865312   111234555 567777775443211     11 2234689999999


Q ss_pred             HHHHHHHHHHCCCe-EEe----cCCCceEEEEECCCCCEEEEEeec
Q 030725          131 VSKLKMILDKAGIS-YTL----SKSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       131 ld~~~~~L~~~Gv~-i~~----~~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +++++++|+++|++ +..    ..+|.+ +||+|||||.|||.+..
T Consensus        77 vd~~~~~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~~  121 (128)
T 3g12_A           77 LEKTVQELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCELE  121 (128)
T ss_dssp             HHHHHHHHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC--
T ss_pred             HHHHHHHHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEec
Confidence            99999999999999 652    257777 99999999999999863

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.77  E-value=1e-17  Score=121.85  Aligned_cols=114  Identities=16%  Similarity=0.232  Sum_probs=83.1

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCC-CCCCCCCCCCcceEEEE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-LSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~-~~~~p~~~g~~~Hi~f~  127 (172)
                      +.-..++.|.|+|++++++||+++|||++....+      ...++..++..+.|........ ....+.  .+..|++|.
T Consensus        25 i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~g~~~l~l~~~~~~~~~~~~~~~--~g~~~~~~~   96 (147)
T 3zw5_A           25 IRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEFEPKAAHPV--PGSLDICLI   96 (147)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTEEEEEEETTSCCSSCCSSCC--TTCCEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC------CceEEEECCcEEEEEEcCCCcCcccCCCC--CCCceEEEE
Confidence            3344689999999999999999999999975311      2356778887787766542211 111111  234789998


Q ss_pred             EC-CHHHHHHHHHHCCCeEEec----C---CCceEEEEECCCCCEEEEEee
Q 030725          128 IR-DVSKLKMILDKAGISYTLS----K---SGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~-dld~~~~~L~~~Gv~i~~~----~---~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +. |+++++++|+++|+++...    .   +..+.+||+|||||.|||.+.
T Consensus        97 ~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~y  147 (147)
T 3zw5_A           97 TEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSNY  147 (147)
T ss_dssp             CSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEEC
T ss_pred             eccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEecC
Confidence            86 9999999999999988622    1   123589999999999999873

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.77  E-value=7.9e-18  Score=119.51  Aligned_cols=111  Identities=13%  Similarity=0.127  Sum_probs=82.2

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCc-ceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC-
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPY-RGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~-~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~-  129 (172)
                      ..|+.+.|+|++++++||+++|||++....+...... ...|+..++..+.|++.+..      +  ..+..|++|.|+ 
T Consensus         5 i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~--~~~~~h~~~~v~~   76 (133)
T 2p7o_A            5 LSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGDSL------Q--ERTYNHIAFQIQS   76 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECSSC------C--CCCSCEEEEECCG
T ss_pred             EEEEEEEcCCHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCCCC------C--CCCeeEEEEEcCH
Confidence            4688999999999999999999999875322100110 11367778777777654311      1  234579999995 


Q ss_pred             -CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          130 -DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 -dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                       |+++++++|+++|+++...    .++.+.+||+|||||.|||.+.
T Consensus        77 ~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (133)
T 2p7o_A           77 EEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAG  122 (133)
T ss_dssp             GGHHHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECS
T ss_pred             HHHHHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcC
Confidence             9999999999999998743    3566889999999999999875

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.77  E-value=9.3e-18  Score=121.55  Aligned_cols=105  Identities=24%  Similarity=0.354  Sum_probs=82.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~--~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.|.|+|++++++||+++|||+.....+    ....+|+..++  ..+.|.+.+.          ..+..|++|.|+
T Consensus        29 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~~~~~~~~l~l~~~~~----------~~~~~h~~~~v~   94 (141)
T 3ghj_A           29 LFEVAVKVKNLEKSSQFYTEILGFEAGLLDS----ARRWNFLWVSGRAGMVVLQEEKE----------NWQQQHFSFRVE   94 (141)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTSCCEEEEEET----TTTEEEEEETTTTEEEEEEECCS----------SCCCCEEEEEEC
T ss_pred             ecEEEEEeCCHHHHHHHHHHhcCCEEEEecC----CCcEEEEEecCCCcEEEEeccCC----------CCCCceEEEEEe
Confidence            3578999999999999999999999976422    12356777764  5677765421          123579999997


Q ss_pred             --CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          130 --DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 --dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                        |+++++++|+++|+++...    .++.+.+||+|||||.|||++.
T Consensus        95 ~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  141 (141)
T 3ghj_A           95 KSEIEPLKKALESKGVSVHGPVNQEWMQAVSLYFADPNGHALEFTAL  141 (141)
T ss_dssp             GGGHHHHHHHHHHTTCCCEEEEEEGGGTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCeEeCCcccCCCCceEEEEECCCCCEEEEEEC
Confidence              9999999999999998732    3456899999999999999863

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.77  E-value=3.4e-18  Score=124.49  Aligned_cols=115  Identities=13%  Similarity=0.119  Sum_probs=84.6

Q ss_pred             eeeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-CeEEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           48 FLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        48 ~l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      .|.-..++.+.|+|++++++||+++|||++....+      ..+++..+ +..+.|+......+.   +...++..|++|
T Consensus        22 ~m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~~---~~~~~~~~hl~f   92 (144)
T 2kjz_A           22 HMTHPDFTILYVDNPPASTQFYKALLGVDPVESSP------TFSLFVLANGMKLGLWSRHTVEPK---ASVTGGGGELAF   92 (144)
T ss_dssp             -CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTTSCEEEEEETTSCSSC---CCCSSSSCEEEE
T ss_pred             ccCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCCCcEEEEEeCCCCCCc---cCCCCCceEEEE
Confidence            34444588999999999999999999999875322      23567776 456777654322111   122245689999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeecC
Q 030725          127 AIR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  172 (172)
Q Consensus       127 ~V~---dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~~  172 (172)
                      .|+   |+++++++|+++|+++...    .+| +.+||+|||||.|||+++.+
T Consensus        93 ~v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~g  144 (144)
T 2kjz_A           93 RVENDAQVDETFAGWKASGVAMLQQPAKMEFG-YTFTAADPDSHRLRVYAFAG  144 (144)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCCSCCEEETTE-EEEEECCTTCCEEEEEEECC
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEecCceecCCc-eEEEEECCCCCEEEEEecCC
Confidence            997   5799999999999988532    455 78999999999999998754

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.77  E-value=2.1e-18  Score=127.53  Aligned_cols=115  Identities=19%  Similarity=0.262  Sum_probs=85.4

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCC-CCC--CCCCCC-CCCcceEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNP-DPL--SGRPEH-GGRDRHTCI  126 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~-~~~--~~~p~~-~g~~~Hi~f  126 (172)
                      -..++.|.|+|++++++||+++|||++....+     ....|+..|+..+.++..... .+.  ...+.. ..+..|++|
T Consensus         8 ~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~-----~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~hi~f   82 (160)
T 3r4q_A            8 AIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQGHFCF   82 (160)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHHSCCEEEEEET-----TTEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEECEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEEecC-----CcEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcceeEEEE
Confidence            35689999999999999999999999976322     135677778777777643211 100  011111 223489999


Q ss_pred             EE---CCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEee
Q 030725          127 AI---RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V---~dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|   +|+++++++|+++|+++...   ..|.+.+||+|||||.|||++.
T Consensus        83 ~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  132 (160)
T 3r4q_A           83 YADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEG  132 (160)
T ss_dssp             EESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEG
T ss_pred             EeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeC
Confidence            99   89999999999999998632   3578899999999999999985

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.76  E-value=1e-17  Score=116.72  Aligned_cols=102  Identities=12%  Similarity=0.098  Sum_probs=76.9

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC---eEEEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA---EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~---~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d  130 (172)
                      ++.+.|+|++++++||+++||++...+ +    + ...++..++   ..+.+.....         ..+...|++|.|+|
T Consensus        10 ~v~l~v~d~~~a~~FY~~~lG~~~~~~-~----~-~~~~~~~~~~~~~~l~l~~~~~---------~~~~~~~~~~~v~d   74 (119)
T 2pjs_A           10 VANIATPEPARAQAFYGDILGMPVAMD-H----G-WIVTHASPLEAHAQVSFAREGG---------SGTDVPDLSIEVDN   74 (119)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEE-C----S-SEEEEEEEEEEEEEEEEESSSB---------TTBCCCSEEEEESC
T ss_pred             EEEEEcCCHHHHHHHHHHhcCCEEEec-C----C-EEEEEecCCCCcEEEEEEcCCC---------CCCceeEEEEEECC
Confidence            889999999999999999999998752 2    1 233455542   2344432210         11234799999999


Q ss_pred             HHHHHHHHHHCCCeEEe----cCCCceEEEEECCCCCEEEEEee
Q 030725          131 VSKLKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~----~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +++++++|+++|+++..    ..+|.+.+||+|||||.|||.+.
T Consensus        75 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           75 FDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            99999999999998752    24677899999999999999985

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.76  E-value=2.7e-17  Score=117.17  Aligned_cols=109  Identities=19%  Similarity=0.155  Sum_probs=79.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC--
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR--  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~--  129 (172)
                      ..|+.|.|+|++++++||+++|||++....+      ....+..++..+.+.......    .|. .....|++|.+.  
T Consensus        10 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~~~~l~~~~~~~----~~~-~~~~~h~~~~~~~~   78 (135)
T 3rri_A           10 VFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGDQLVCHLSDRWD----REV-SMYPRHFGITFRDK   78 (135)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTEEEEEEECSCSC----SSC-CSSSCEEEEECSSH
T ss_pred             cceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCCEEEEEEcCccc----ccC-CCCCCeEEEEEcCh
Confidence            4578999999999999999999999964321      123345555556654433211    111 223579999985  


Q ss_pred             -CHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCEEEEEeec
Q 030725          130 -DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       130 -dld~~~~~L~~~Gv~i~~~--------~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                       |+++++++|+++|+++...        .++.+.+||+|||||.|||.+..
T Consensus        79 ~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           79 KHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             HhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence             5999999999999988521        23457899999999999999864

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.76  E-value=1.1e-17  Score=122.60  Aligned_cols=110  Identities=14%  Similarity=0.081  Sum_probs=82.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe-CCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~-g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d  130 (172)
                      ..++.|.|+|++++++||+++|||++....+      ..+++.. ++..+.|+......+.   +...++..|++|.|+|
T Consensus         7 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g~~l~l~~~~~~~~~---~~~~~~~~~l~f~v~d   77 (148)
T 3rhe_A            7 PNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTGLRLGLWAQEEIEPK---AHQTGGGMELSFQVNS   77 (148)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTSCEEEEEEGGGCSSC---CC----CEEEEEECSC
T ss_pred             ccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCCcEEEEecCCcCCcc---ccCCCCeEEEEEEcCC
Confidence            4588999999999999999999999875322      2456676 5667777655322111   1112345799999987


Q ss_pred             ---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          131 ---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       131 ---ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                         +++++++|+++|+++..+    .+| +.+||+|||||.|||++..
T Consensus        78 ~~dvd~~~~~l~~~G~~i~~~p~~~~~G-~~~~~~DPdG~~iel~~~~  124 (148)
T 3rhe_A           78 NEMVDEIHRQWSDKEISIIQPPTQMDFG-YTFVGVDPDEHRLRIFCLK  124 (148)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEEETTE-EEEEEECTTCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCEEEeCCeecCCC-cEEEEECCCCCEEEEEEcC
Confidence               999999999999998632    456 8899999999999999864

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.76  E-value=3.5e-18  Score=124.64  Aligned_cols=113  Identities=14%  Similarity=0.043  Sum_probs=83.6

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCC-CCCCCcceEEEEE---
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRP-EHGGRDRHTCIAI---  128 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p-~~~g~~~Hi~f~V---  128 (172)
                      .++.+.|+|++++++||+++||+++....      ...+++..++..+.|++.+........+ ....+..|++|.|   
T Consensus         7 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~------~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~f~v~~~   80 (150)
T 3bqx_A            7 AVITLGIGDLEASARFYGEGFGWAPVFRN------PEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALAHNVRAE   80 (150)
T ss_dssp             CEEEEEESCHHHHHHHHHHTSCCCCSEEC------SSEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEEEECSSG
T ss_pred             EEEEEEcCCHHHHHHHHHHhcCCEeecCC------CCEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEEEEeCCH
Confidence            47888999999999999999999986531      1345677777778887643100000001 0123457999999   


Q ss_pred             CCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          129 RDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +|+++++++|+++|+++...    .+|.+.+||+|||||.|||.+.+
T Consensus        81 ~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  127 (150)
T 3bqx_A           81 TEVAPLMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNP  127 (150)
T ss_dssp             GGHHHHHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECT
T ss_pred             HHHHHHHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCC
Confidence            89999999999999998632    45778999999999999999864

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.75  E-value=1.1e-17  Score=118.02  Aligned_cols=102  Identities=17%  Similarity=0.118  Sum_probs=79.7

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  133 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~  133 (172)
                      ++.+.++|++++++||+++|||++... .   .  ..+++..++..++|...+..      +  .+...|++|.|+|+++
T Consensus         8 ~~~l~v~D~~~a~~FY~~~LG~~~~~~-~---~--~~~~~~~~~~~l~l~~~~~~------~--~~~~~~~~~~v~dvd~   73 (122)
T 1qto_A            8 VPVLTAVDVPANVSFWVDTLGFEKDFG-D---R--DFAGVRRGDIRLHISRTEHQ------I--VADNTSAWIEVTDPDA   73 (122)
T ss_dssp             CCEEEESSHHHHHHHHHHTTCCEEEEE-C---S--SEEEEEETTEEEEEEECSCH------H--HHTTCEEEEEESCHHH
T ss_pred             eEEEEcCCHHHHHHHHHhccCcEEeeC-C---C--CEEEEEECCEEEEEEcCCCC------C--CCCceEEEEEECCHHH
Confidence            567888999999999999999999753 2   1  23456778778888654311      1  1123699999999999


Q ss_pred             HHHHHHHC------CC--eEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          134 LKMILDKA------GI--SYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       134 ~~~~L~~~------Gv--~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++++|+++      |+  ++...    .+| +.+||+|||||.|||.+.
T Consensus        74 ~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           74 LHEEWARAVSTDYADTSGPAMTPVGESPAG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHTTTSCSCTTCTTSCEECCCEEETTE-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHhhccccccCccccccCCCcCCCCC-cEEEEECCCCCEEEEecC
Confidence            99999999      99  77532    467 889999999999999985

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.74  E-value=8.4e-18  Score=120.93  Aligned_cols=121  Identities=12%  Similarity=0.109  Sum_probs=85.8

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC------eEEEEEecCCCCCCCC--CCCCC--CC
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA------EMIHLMELPNPDPLSG--RPEHG--GR  120 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~------~~l~L~~~~~~~~~~~--~p~~~--g~  120 (172)
                      -..|+.+.|+|++++++||+++|||+..........+...+++..++      ..++|++.........  ....+  .+
T Consensus         9 ~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g   88 (148)
T 1jc4_A            9 CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAG   88 (148)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCCE
T ss_pred             eeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCCCc
Confidence            34688999999999999999999999875321111233456777766      5688876542211000  00111  34


Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEE-ec----CCCceEEEE--ECCCCCEEEEEeec
Q 030725          121 DRHTCIAIRDVSKLKMILDKAGISYT-LS----KSGRPAIFT--RDPDANALEFTQVD  171 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~~Gv~i~-~~----~~g~~~~y~--~DPDGn~iEl~e~~  171 (172)
                      ..|++|.|+|+++++++|+++|+++. ..    .+|.+.+|+  +|||||.|||++..
T Consensus        89 ~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           89 LHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             eEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecC
Confidence            57999999999999999999999886 22    356667777  99999999999863

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.74  E-value=3e-17  Score=119.40  Aligned_cols=114  Identities=11%  Similarity=0.006  Sum_probs=73.8

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEE-eCCeEEEEEecC---CCCCCCCCCCCCCCcceEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLW-VGAEMIHLMELP---NPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~-~g~~~l~L~~~~---~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      ..++++.|+|+++|++||+++ |+.......    .....++. .++..+.+....   ........+...+...|+||.
T Consensus        10 l~~V~L~V~Dl~~s~~FY~~l-g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   84 (149)
T 4gym_A           10 LTFVNLPVADVAASQAFFGTL-GFEFNPKFT----DESCACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVCVS   84 (149)
T ss_dssp             CEEEEEEESCHHHHHHHHHHT-TCEECGGGC----BTTEEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEEEE
T ss_pred             EEEEEEEeCCHHHHHHHHHHh-CCCcceeec----CCceeEEeecCcceEeeeccccccccccccCCCCCCCCeeEEEEE
Confidence            357899999999999999985 554433222    11223333 344444443221   000011111223455799999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEee
Q 030725          128 IR---DVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~---dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+   +++++++++.++|+.+...   .++.+++||+|||||.|||..+
T Consensus        85 v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~  133 (149)
T 4gym_A           85 AIDRDDVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWM  133 (149)
T ss_dssp             CSSHHHHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             eccHHHHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEE
Confidence            96   5788999999999998633   3556899999999999999875

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.74  E-value=2.4e-17  Score=120.35  Aligned_cols=107  Identities=11%  Similarity=0.097  Sum_probs=76.6

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  133 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~  133 (172)
                      .+.|.|+|++++++||+++|||++.........  .......++  ++++..+...      ....+..|++|.|+|+++
T Consensus         9 ~i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~~~~--~~l~~~~~~~------~~~~~~~hl~f~V~d~d~   78 (144)
T 3r6a_A            9 LSRLYVADLNPALEFYEELLETPVAMRFEIPQT--GVELAQIST--ILLIAGSEEA------LKPFRNTQATFLVDSLDK   78 (144)
T ss_dssp             EEEEEESCHHHHHHHHHHHTTCCCCEECCCSCS--SCEEEEETT--EEEEESCHHH------HGGGGGCCEEEEESCHHH
T ss_pred             EEEEEECCHHHHHHHHHHhcCCEEEEEeccCCc--cEEEEEecc--EEEecCCccc------CCCCcceEEEEEeCCHHH
Confidence            378899999999999999999998653211011  112233444  5555433110      011234799999999999


Q ss_pred             HHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          134 LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       134 ~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ++++|+++|+++...    .+| +.+||+|||||.|||++..
T Consensus        79 ~~~~l~~~G~~v~~~p~~~~~G-~~~~~~DPdG~~iel~~~~  119 (144)
T 3r6a_A           79 FKTFLEENGAEIIRGPSKVPTG-RNMTVRHSDGSVIEYVEHS  119 (144)
T ss_dssp             HHHHHHHTTCEEEEEEEEETTE-EEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHcCCEEecCCccCCCc-eEEEEECCCCCEEEEEEcC
Confidence            999999999998633    456 7899999999999999863

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.74  E-value=8.5e-18  Score=123.03  Aligned_cols=112  Identities=13%  Similarity=0.017  Sum_probs=79.7

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCC--CC-CCCCCCCCcceEEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP--LS-GRPEHGGRDRHTCIAI  128 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~--~~-~~p~~~g~~~Hi~f~V  128 (172)
                      ..++.|.|+|++++++||+++|||++.. .+    ....+++..++..++|+....+..  .. ..+.. .+ .|++|.|
T Consensus        26 i~hv~l~v~Dl~~a~~FY~~vLG~~~~~-~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g-~~l~f~v   98 (148)
T 2r6u_A           26 IVHFEIPFDDGDRARAFYRDAFGWAIAE-IP----DMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV-TT-PVVTVDV   98 (148)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHCCEEEE-ET----TTTEEEEECSCBCTTSSBCSSSCBCEEEEESSSS-CS-CEEEEEC
T ss_pred             eEEEEEEeCCHHHHHHHHHHccCcEEEE-CC----CCCEEEEEeCCcceeecccCCcccccceeecCCC-Ce-EEEEEEc
Confidence            4688999999999999999999999875 22    123456777665433332211100  00 00111 22 4999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec----C-CCceEEEEECCCCCEEEEEeec
Q 030725          129 RDVSKLKMILDKAGISYTLS----K-SGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~----~-~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +|+++++++|+++|+++...    . +| +.+||+|||||.|||++..
T Consensus        99 ~dld~~~~~l~~~G~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           99 ESIESALERIESLGGKTVTGRTPVGNMG-FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETTTE-EEEEEECTTSCEEEEEEEC
T ss_pred             CCHHHHHHHHHHcCCeEecCCeecCCCE-EEEEEECCCCCEEEEEecC
Confidence            99999999999999998632    3 34 7899999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.73  E-value=3.6e-17  Score=119.19  Aligned_cols=113  Identities=12%  Similarity=0.106  Sum_probs=82.4

Q ss_pred             EEeeeeecCChHHHHHHh---HhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           52 KAKMSVEGGILKKEPIRD---SDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY---~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      ..++.+.|+|++++++||   +++|||++....+    .. ..|+. |+..+.|++...............+..|++|.|
T Consensus        21 i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~----~~-~~~~~-g~~~l~l~~~~~~~~~~~~~~~~~g~~hi~f~v   94 (146)
T 3ct8_A           21 LHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS----RG-KSYKH-GKTYLVFVQTEDRFQTPTFHRKRTGLNHLAFHA   94 (146)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET----TE-EEEEE-TTEEEEEEECCGGGSCSCCCTTSSSCCEEEEEC
T ss_pred             eeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC----CC-ceEec-CCeEEEEEEcCCCcccccccccCCCceEEEEEC
Confidence            457889999999999999   9999999875332    11 24666 777788876542100000011123457999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEec-----C--CCceEEEEECCCCCEEEEEee
Q 030725          129 R---DVSKLKMILDKAGISYTLS-----K--SGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~---dld~~~~~L~~~Gv~i~~~-----~--~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +   |+++++++|+++|+++...     .  ++.+.+||+|||||.|||+++
T Consensus        95 ~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           95 ASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            9   8999999999999998642     1  246789999999999999874

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.73  E-value=2.6e-17  Score=118.13  Aligned_cols=113  Identities=19%  Similarity=0.150  Sum_probs=81.5

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe-CCeEEEEEecCCC---CCCCCCCCCCCCcceEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV-GAEMIHLMELPNP---DPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~-g~~~l~L~~~~~~---~~~~~~p~~~g~~~Hi~f~  127 (172)
                      ..++.+.|+|++++++||++ |||++....+    ....+++.. ++..+.|+.....   .+.. .+...++..|++|.
T Consensus         5 l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~----~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~l~f~   78 (138)
T 2a4x_A            5 ISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD----SAPHTEAVLDGGIRLAWDTVETVRSYDPEW-QAPTGGHRFAIAFE   78 (138)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCCCCGGGG----GCSEEEEECTTSCEEEEEEHHHHHHHCTTC-CCCBSSCSEEEEEE
T ss_pred             eeEEEEEECCHHHHHHHHHH-cCCcEEecCC----CCceEEEEcCCCeEEEEecCccchhhCccc-CCCCCCCeEEEEEE
Confidence            35788999999999999998 9999865322    112234555 5556777653210   0000 11122456899999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          128 IR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~---dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+   |+++++++|+++|+++...    .+|.+.+||+|||||.|||.+.
T Consensus        79 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  128 (138)
T 2a4x_A           79 FPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAP  128 (138)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEE
T ss_pred             eCCHHHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeC
Confidence            99   9999999999999998632    5677899999999999999986

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.73  E-value=6.2e-17  Score=116.53  Aligned_cols=116  Identities=14%  Similarity=-0.010  Sum_probs=80.7

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCC---CCCCCCCCCCCCCcceEEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPN---PDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~---~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      ...++.+.|+|++++++||+++|||++....+  ..  ...++..++..+.+.....   ...... +...+...|++|.
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~--~~~~~~~~~~~l~l~~~~~~~~~~~~~~-~~~~~~~~~~~f~   82 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIR--SP--IFRGLDTGKSCIGFNAHEAYELMQLAQF-SETSGIKFLLNFD   82 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGC--BT--TEEEEECSSSEEEEECTHHHHHTTCGGG-CCCBSCCEEEEEE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccC--CC--ceEEeecCCEEEEEcCcccccccccccc-CCCCCCeEEEEEE
Confidence            35688999999999999999999999864221  11  1244566655666543100   000000 0111223599999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          128 IR---DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       128 V~---dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      |+   |+++++++|+++|+++...    .+|.+.+||+|||||.|||.+..
T Consensus        83 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           83 VDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcc
Confidence            99   5999999999999997632    46788999999999999999863

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.73  E-value=1.9e-17  Score=118.97  Aligned_cols=114  Identities=11%  Similarity=0.081  Sum_probs=77.9

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~--~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..++++.|+|++++++||+++|||++....+. ...+...++..++  ..+++.......+   . ..+.+..|++|.|+
T Consensus        12 ~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~-~~~~~~~hi~~~v~   86 (139)
T 1twu_A           12 QIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHADYHLEFTQYEGGST---A-PVPHPDSLLVFYVP   86 (139)
T ss_dssp             CEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSSEEEEEEEETTCCC---C-CCCCTTCEEEEECC
T ss_pred             eeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCceEEEEeecCCCCC---C-CCCCCccEEEEEeC
Confidence            34678889999999999999999998753221 1223445565543  2455554332211   1 11234579999999


Q ss_pred             CH---HHHHHHHHHCCCeEE--ec-CCCceEEEEECCCCCEEEEEee
Q 030725          130 DV---SKLKMILDKAGISYT--LS-KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 dl---d~~~~~L~~~Gv~i~--~~-~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+   ++++++|+++|+++.  .. .++....||+|||||.|||++.
T Consensus        87 d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~  133 (139)
T 1twu_A           87 NAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNS  133 (139)
T ss_dssp             CHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESS
T ss_pred             CcchHHHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEc
Confidence            99   999999999999987  32 1111123799999999999975

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.73  E-value=5.8e-17  Score=121.90  Aligned_cols=120  Identities=15%  Similarity=0.105  Sum_probs=81.2

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-------------------CeEEEEEecCCC--CC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-------------------AEMIHLMELPNP--DP  110 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-------------------~~~l~L~~~~~~--~~  110 (172)
                      ..|+.+.|+|++++++||+++|||++..........+...++..+                   +..++|++....  .+
T Consensus        32 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~~~~  111 (184)
T 2za0_A           32 LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDE  111 (184)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCT
T ss_pred             EEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCCCCc
Confidence            457899999999999999999999987532100112222233332                   346777654321  11


Q ss_pred             CCC---CCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC---CCceEEEEECCCCCEEEEEeec
Q 030725          111 LSG---RPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK---SGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       111 ~~~---~p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~---~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ...   ......+..|++|.|+|+++++++|+++|+++....   .+.+.+||+|||||.|||++..
T Consensus       112 ~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~  178 (184)
T 2za0_A          112 TQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  178 (184)
T ss_dssp             TCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             ccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecC
Confidence            100   000113457999999999999999999999987432   2345789999999999999853

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.73  E-value=7.7e-17  Score=116.67  Aligned_cols=112  Identities=16%  Similarity=0.116  Sum_probs=80.1

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCC-----CCCCCCCCCCcceEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDP-----LSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~-----~~~~p~~~g~~~Hi~f~  127 (172)
                      ..+.|.|+|++++++||+++|||++....+.    ...+++..++..++|........     ....+. +.+ .+++|.
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~----~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~-~~g-~~~~~~   80 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPD----EEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPL-GSG-VNFQWD   80 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGG----GTEEEEEETTEEEEEEEC-----------CCSST-TTT-EEEEEE
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCC----CCEEEEEcCCeEEEEEeccCCCcccccCccccCC-CCc-eEEEEE
Confidence            4577888999999999999999998743221    12356777877788765421110     001111 122 459999


Q ss_pred             ECCHHHHHHHHHH-CCCeEEec-----------CCCceEEEEECCCCCEEEEEee
Q 030725          128 IRDVSKLKMILDK-AGISYTLS-----------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~dld~~~~~L~~-~Gv~i~~~-----------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+|+++++++|++ +|+++...           .++.+.+||+|||||.|||.+.
T Consensus        81 v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~  135 (145)
T 2rk9_A           81 VIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQD  135 (145)
T ss_dssp             CSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC
T ss_pred             ECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEc
Confidence            9999999999999 99988622           2345789999999999999985

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.71  E-value=9.3e-17  Score=111.02  Aligned_cols=103  Identities=13%  Similarity=0.083  Sum_probs=76.8

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC-eEEEEEecCCCCCCCCCCCCCCCcceEEEEE---
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA-EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI---  128 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~-~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V---  128 (172)
                      .|+.+.|+|++++++||+++|||++.....     ....|+..++ ..+.+++.+..      +  ..+..|++|.|   
T Consensus         5 ~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~l~l~~~~~~------~--~~~~~~~~~~v~~~   71 (113)
T 1xqa_A            5 KHLNLTVADVVAAREFLEKYFGLTCSGTRG-----NAFAVMRDNDGFILTLMKGKEV------Q--YPKTFHVGFPQESE   71 (113)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEET-----TTEEEEECTTCCEEEEEECSSC------C--CCTTCCEEEECSSH
T ss_pred             EEEEEEeCCHHHHHHHHHHhCCCEEeccCC-----CcEEEEEcCCCcEEEEEeCCCC------C--CCceeEEEEEcCCH
Confidence            468889999999999999999999875311     1235666643 45777654311      1  12357999999   


Q ss_pred             CCHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCEEEEE
Q 030725          129 RDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~-~~g~~~~y~~DPDGn~iEl~  168 (172)
                      +|+++++++|+++|+++..+ ..+.+.+||+|||||.|||+
T Consensus        72 ~d~~~~~~~l~~~G~~~~~p~~~~~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           72 EQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             HHHHHHHHHHHHCCCEEecCcCCCcEEEEEECCCCcEEEEe
Confidence            78999999999999987532 12267899999999999996

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.66  E-value=2.4e-16  Score=113.03  Aligned_cols=108  Identities=16%  Similarity=0.085  Sum_probs=73.6

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEE-----Eec-CCCCCCCCCCCCCCCcceEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHL-----MEL-PNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L-----~~~-~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      .++.+.|+|++++++||+++||+++....+      ...++. ++..++.     ... +.... . .+...++..|++|
T Consensus        10 ~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~-~g~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~   80 (141)
T 2qnt_A           10 VNPIPFVRDINRSKSFYRDRLGLKILEDFG------SFVLFE-TGFAIHEGRSLEETIWRTSSD-A-QEAYGRRNMLLYF   80 (141)
T ss_dssp             CCCCCEESCHHHHHHHHHHTTCCCEEEECS------SEEEET-TSCEEEEHHHHHHHHHSCCC----CCCSCCSSCEEEE
T ss_pred             ceEEEEECCHHHHHHHHHHhcCCEEEEEcC------CcEEEe-ccceeccCchhhhhccccCCc-c-ccccCCCceEEEE
Confidence            468888999999999999999999875321      122232 2333331     110 00000 0 0111234679999


Q ss_pred             EECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+|+++++++|++ |+++..+    .+|.+.+||+|||||.|||.+.
T Consensus        81 ~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  127 (141)
T 2qnt_A           81 EHADVDAAFQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGES  127 (141)
T ss_dssp             EESCHHHHHC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEEC
T ss_pred             EeCcHHHHHHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEec
Confidence            99999999999999 9997532    4677899999999999999985

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.66  E-value=1.4e-15  Score=110.43  Aligned_cols=109  Identities=12%  Similarity=-0.021  Sum_probs=72.9

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeee-cCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceE-----
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEA-RPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHT-----  124 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~-~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi-----  124 (172)
                      -..|+.+.|+|++++++||+++|||++... ..  ..  ...++  | ..++| ....+..   .+. .....|+     
T Consensus        21 ~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~--~~~~~--g-~~l~l-~~~~~~~---~~~-~~~~~~~~~g~~   88 (148)
T 3bt3_A           21 RENGPVYFTKDMDKTVKWFEEILGWSGDIVARD--DE--GFGDY--G-CVFDY-PSEVAVA---HLT-PFRGFHLFKGEP   88 (148)
T ss_dssp             EECCCEEEESCHHHHHHHHHHTTCCEEEEEEEC--TT--SCEEE--E-EEESS-CTTTTSC---C---CCCSEEEEESCC
T ss_pred             EeeeEEEEECCHHHHHHHHHhccCCEEEeeeec--CC--CccEE--c-cEEEE-eccCCCc---ccc-cccccceeeccC
Confidence            345788999999999999999999998531 11  11  12344  3 22333 1111110   001 0011232     


Q ss_pred             -----EE-EECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          125 -----CI-AIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       125 -----~f-~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                           +| .|+|+++++++|+++|+++...    .+|.+.+||+|||||.|||.+..
T Consensus        89 ~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           89 IKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             CCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence                 65 9999999999999999987532    46778999999999999999863

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.64  E-value=2.3e-15  Score=119.99  Aligned_cols=107  Identities=13%  Similarity=0.112  Sum_probs=83.3

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      +.-..++.+.|+|++++++||+++|||++..+.+      ...++..|+..+.|...+..         ..+..|+||.|
T Consensus        24 ~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~~~l~l~~~~~~---------~~~~~hiaf~V   88 (252)
T 3pkv_A           24 MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQFRAAADG---------TKPFYHIAINI   88 (252)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETTEEEEEEECCTT---------CCCCCEEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCCEEEEEEECCCC---------CCCeeEEEEEe
Confidence            3345688999999999999999999999875322      24677778877777654311         12357999998


Q ss_pred             C--CHHHHHHHHHHCCCeEEe---------cCCCceEEEEECCCCCEEEEEeec
Q 030725          129 R--DVSKLKMILDKAGISYTL---------SKSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       129 ~--dld~~~~~L~~~Gv~i~~---------~~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +  ++++++++|+++ +++..         ..++.+.+||+|||||.|||++..
T Consensus        89 ~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~  141 (252)
T 3pkv_A           89 AANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQ  141 (252)
T ss_dssp             CTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEES
T ss_pred             cHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeC
Confidence            5  699999999999 98853         256788999999999999999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.63  E-value=4.5e-15  Score=122.51  Aligned_cols=117  Identities=15%  Similarity=0.146  Sum_probs=84.2

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCC-CCCCcceEEEEeC----CeEEEEEecCCCCCCCCCCCCCCCcceEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPH-DKLPYRGAWLWVG----AEMIHLMELPNPDPLSGRPEHGGRDRHTC  125 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~-~~~~~~~~~~~~g----~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~  125 (172)
                      -..|+++.|+|++++++||+++|||++..+... +.......++..+    +..++++..+....  ..+. .++..|+|
T Consensus         8 ~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~--~~~~-~~~~~hia   84 (335)
T 3oaj_A            8 GIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQ--GVIG-DGQVGVTS   84 (335)
T ss_dssp             SEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCB--CBCC-BSEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCC--CCCC-CCceEEEE
Confidence            356899999999999999999999998764321 0011111233322    34678876653211  1111 23568999


Q ss_pred             EEEC--CHHHHHHHHHHCCCeEEe-cCCCceEEEEECCCCCEEEEEee
Q 030725          126 IAIR--DVSKLKMILDKAGISYTL-SKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       126 f~V~--dld~~~~~L~~~Gv~i~~-~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |.|+  |+++++++|+++|+++.. ..+|.+++||+|||||.|||++.
T Consensus        85 f~V~~~dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~  132 (335)
T 3oaj_A           85 YVVPKGAMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVER  132 (335)
T ss_dssp             EEECTTCHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEEC
T ss_pred             EEecHHHHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEe
Confidence            9999  999999999999998874 35677899999999999999985

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.61  E-value=1.1e-14  Score=120.31  Aligned_cols=113  Identities=13%  Similarity=0.053  Sum_probs=82.5

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~--~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      +.-..|+.+.|+|++++.+||+++|||+......      ...++..|+  ..++++..+...  ...+. .++.+|+||
T Consensus       151 i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~------~~~~~~~g~~~~~l~l~~~~~~~--~~~~g-~g~~~HiAf  221 (335)
T 3oaj_A          151 IKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDLKLTPIG--RGQMG-AGTVHHIAW  221 (335)
T ss_dssp             CCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEET------TEEEEECSSSSSCEEEEESSCCC--BCBCS-BTEEEEEEE
T ss_pred             hccccceEEEECCHHHHHHHHHHHhCCEEeeccC------CEEEEEeCCCCcEEEEEeCCCCC--cCCCC-CcceEEEEE
Confidence            3445689999999999999999999999975321      234455543  357776543221  11122 245789999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~d---ld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+|   +++++++|+++|+++...  .....++||+|||||.|||...
T Consensus       222 ~v~d~~~l~~~~~~L~~~G~~~~~~~~r~~~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          222 RANDDEDQLDWQRYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCCCCEECSSSEEEEEECTTSCEEEEEES
T ss_pred             EcCCHHHHHHHHHHHHHCCCCccccccCCcEEEEEEECCCCcEEEEEeC
Confidence            9998   566899999999987532  3456789999999999999875

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.60  E-value=9.1e-15  Score=117.38  Aligned_cols=106  Identities=14%  Similarity=0.067  Sum_probs=79.7

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      +-..|+.+.|+|++++++||+++|||++....+      ...++..++..+.+...+..         ..+..|++|.|+
T Consensus         3 ~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~f~v~   67 (297)
T 1lgt_A            3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE---------VDDLAFAGYEVA   67 (297)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT---------TCEEEEEEEEES
T ss_pred             eEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC------CeEEEEeCCCcEEEEEecCC---------CCCccEEEEEeC
Confidence            345689999999999999999999999975322      24566665543222211110         124579999998


Q ss_pred             ---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEee
Q 030725          130 ---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 ---dld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                         |+++++++|+++|+++...       .++.+.+||+|||||.|||++.
T Consensus        68 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  118 (297)
T 1lgt_A           68 DAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (297)
T ss_dssp             SHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEEC
Confidence               8999999999999998642       2567899999999999999985

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.59  E-value=8e-15  Score=117.45  Aligned_cols=105  Identities=11%  Similarity=0.058  Sum_probs=78.5

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC-
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  129 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~-  129 (172)
                      -..|+.+.|+|++++++||+++|||++....+      ...|+..++..+.+.....         ...+..|++|.|+ 
T Consensus         4 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~l~~~~~---------~~~~~~~~~f~v~~   68 (292)
T 1kw3_B            4 RLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPG---------ELDDLAYAGLEVDD   68 (292)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEEC---------TTCEEEEEEEECSS
T ss_pred             eEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC------CeEEEEcCCceEEEEEccC---------CCCCccEEEEEECC
Confidence            34688999999999999999999999875321      2356666543222211110         0124579999998 


Q ss_pred             --CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEee
Q 030725          130 --DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 --dld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                        |+++++++|+++|+++...       .++.+.+||+|||||.|||++.
T Consensus        69 ~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  118 (292)
T 1kw3_B           69 AAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (292)
T ss_dssp             HHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEEC
Confidence              8999999999999998643       2567889999999999999875

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.59  E-value=4.5e-14  Score=113.56  Aligned_cols=111  Identities=12%  Similarity=-0.029  Sum_probs=78.8

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      ..++.|.++|++++++||+++||++.......  ......++..++..+..+ .+.. +     .......|++|.|+|+
T Consensus       165 ~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~-~-----~~~~~~~~~~~~v~dv  235 (282)
T 3oxh_A          165 LIWNELLTDKPDLALAFYEAVVGLTHSSMEIA--AGQNYRVLKAGDAEVGGC-MEPP-M-----PGVPNHWHVYFAVDDA  235 (282)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTEEEEEE-ECCS-S-----TTCCSEEEEEEECSCH
T ss_pred             cEEEEEEcCCHHHHHHHHHHHhCCeeeeccCC--CCcceEEEEcCCccEeee-cCCC-C-----CCCCCeEEEEEEeCCH
Confidence            45788999999999999999999998752200  111223455565543322 2211 1     1122347899999999


Q ss_pred             HHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          132 SKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ++++++++++|+++...    .++.+.+||+|||||.|||+++.
T Consensus       236 d~~~~~~~~~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          236 DATAAKAAAAGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHcCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecC
Confidence            99999999999998632    45678999999999999999874

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.58  E-value=2.4e-14  Score=117.71  Aligned_cols=108  Identities=15%  Similarity=0.197  Sum_probs=79.5

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC-
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~-  129 (172)
                      .|+.+.|+|++++++||+++|||++....+.  .  ...|+..++.  .+.+.....+  .    ....+..|++|.|+ 
T Consensus       161 ~hv~L~v~Dl~~a~~FY~~vLG~~~~~~~~~--~--~~~~l~~g~~~~~l~l~~~~~~--~----~~~~~~~hiaf~v~~  230 (330)
T 3zi1_A          161 LKVTLAVSDLQKSLNYWCNLLGMKIYENDEE--K--QRALLGYADNQCKLELQGVKGG--V----DHAAAFGRIAFSCPQ  230 (330)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEETT--T--TEEEEESSTTSCEEEEEECSSC--C----CCBTTCCEEEEEECG
T ss_pred             eEEEEECCCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEeCCceEEEEECCCCCC--C----CCCCCCceEEEEEEc
Confidence            4789999999999999999999999764331  1  2467777654  3444332211  0    11234569999995 


Q ss_pred             -CHHHHHHHHHHCCCeEEec--------CCCceEEEEECCCCCEEEEEee
Q 030725          130 -DVSKLKMILDKAGISYTLS--------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 -dld~~~~~L~~~Gv~i~~~--------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                       |+++++++|+++|+++...        .++.+.+||+|||||.|||++.
T Consensus       231 ~dld~~~~rl~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~  280 (330)
T 3zi1_A          231 KELPDLEDLMKRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGD  280 (330)
T ss_dssp             GGHHHHHHHHHHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEH
T ss_pred             ccHHHHHHHHHHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEe
Confidence             7999999999999997522        2366899999999999999985

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.58  E-value=6.3e-14  Score=111.68  Aligned_cols=108  Identities=12%  Similarity=0.003  Sum_probs=76.6

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~----~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      ..+..+.|+|+++|++||+++||++.....+.   .....++..++    ..+++...+.        ..++...+++|.
T Consensus       184 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~  252 (301)
T 2zw5_A          184 AVITELPVRDVAATLRLVEAALGARTAFAIGD---PPEFAEAALTPWSAGPRFRLAAVPG--------PGPVEPVRLHLD  252 (301)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHSCCEEEEEEET---TEEEEEEESSSSSSSSEEEEEECCC--------SSCCCCCEEEEE
T ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCeEeeecCC---CccEEEEEcCCCccccccccccCCC--------cCCCCceEEEEE
Confidence            44667788999999999999999998742221   11112345554    2333321110        112234689999


Q ss_pred             EC-CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          128 IR-DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~-dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+ |+++++++++++|+++..+    .+|.+.++|+|||||.|||.++
T Consensus       253 v~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          253 AAGTADSLHRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             cCccHHHHHHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence            99 9999999999999998632    4677899999999999999885

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.58  E-value=3e-14  Score=115.21  Aligned_cols=104  Identities=13%  Similarity=0.024  Sum_probs=78.4

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~-g~---~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      -..|+.+.|+|++++++||+++|||++....+     ....|+.. ++   ..+.+...+           ..+..|++|
T Consensus         8 ~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~-----~~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~h~a~   71 (309)
T 3hpy_A            8 RPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD-----QGRVYFKCWDERDHSCYIIREAD-----------TAGIDFFGF   71 (309)
T ss_dssp             EEEEEEEEESSHHHHHHHHHHTSCCEEEEECT-----TSCEEEECTTCCBSCSEEEEECS-----------SCEEEEEEE
T ss_pred             eeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC-----CCeEEEEeccCCCceEEEEEeCC-----------CCceeEEEE
Confidence            34589999999999999999999999975321     12456664 33   234443221           124689999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~d---ld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+|   +++++++|+++|+++...     .++.+.+||+|||||.|||++.
T Consensus        72 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (309)
T 3hpy_A           72 KVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAE  123 (309)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             EECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEc
Confidence            9986   899999999999998642     3556799999999999999874

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.58  E-value=1.9e-14  Score=116.30  Aligned_cols=111  Identities=16%  Similarity=0.200  Sum_probs=78.3

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCC-CCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDK-LPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      .-..|+.+.|+|++++++||+++|||+......... ......|+..++.  .+.+...+         . .++.+|+||
T Consensus       150 ~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~Hiaf  219 (309)
T 3hpy_A          150 IQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYP---------E-KGKLHHCSF  219 (309)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEECS---------S-TTEEEEEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecCC---------C-CCceeEEEE
Confidence            335588999999999999999999999865322111 1223567766543  23333221         1 235789999


Q ss_pred             EECCHHH---HHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRDVSK---LKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~dld~---~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+|+++   ++++|+++|+++...     ..+..++||+|||||.|||+..
T Consensus       220 ~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  271 (309)
T 3hpy_A          220 LLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMG  271 (309)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEE
T ss_pred             ECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeC
Confidence            9998765   678999999987632     2346789999999999999764

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.58  E-value=1.5e-14  Score=119.13  Aligned_cols=111  Identities=12%  Similarity=0.095  Sum_probs=80.1

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      .-..|+.+.|+|++++.+||+++|||++..... ........|+..++.  .+.+...+.        ...++.+|++|.
T Consensus       152 ~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~l~~~~~~~--------~~~~~~~Hiaf~  222 (339)
T 3lm4_A          152 KRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHEVACMRDMT--------GGHGKLHHLAFF  222 (339)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCSEEEEECTT--------SCCSEEEEEEEE
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceEEEEeccCC--------CCCCceeEEEEE
Confidence            334588999999999999999999999875322 111223456666543  455544211        113457999999


Q ss_pred             ECC---HHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEe
Q 030725          128 IRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       128 V~d---ld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      |+|   +++++++|+++|+++...     .++.+.+||+|||||.||++.
T Consensus       223 v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  272 (339)
T 3lm4_A          223 YGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFG  272 (339)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEEC
T ss_pred             eCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEE
Confidence            999   778889999999998632     233567999999999999975

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.57  E-value=4e-14  Score=113.79  Aligned_cols=109  Identities=7%  Similarity=0.081  Sum_probs=76.7

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCC---------CCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHD---------KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGR  120 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~---------~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~  120 (172)
                      ..|+.+.|+|++++++||+++|||+........         .......|+..++.  .+.+.+.+         . ..+
T Consensus       143 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~-~~g  212 (300)
T 2zyq_A          143 MGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMP---------T-SSG  212 (300)
T ss_dssp             SCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESSC---------C-SSS
T ss_pred             cCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecCC---------C-CCC
Confidence            357889999999999999999999986421100         00122456665532  34544321         1 234


Q ss_pred             cceEEEEECCHHH---HHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          121 DRHTCIAIRDVSK---LKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       121 ~~Hi~f~V~dld~---~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .+|+||.|+|+++   ++++|+++|+++...     .++.+++||+|||||.|||++.
T Consensus       213 ~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (300)
T 2zyq_A          213 IVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCE  270 (300)
T ss_dssp             EEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEEC
T ss_pred             ceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeC
Confidence            5899999999665   599999999998632     2336789999999999999863

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.57  E-value=3.2e-14  Score=116.65  Aligned_cols=111  Identities=13%  Similarity=0.133  Sum_probs=79.1

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC--Ce--EEEEEecCCCCCCCCCCCCCCCcceEE
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG--AE--MIHLMELPNPDPLSGRPEHGGRDRHTC  125 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g--~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~  125 (172)
                      .-..|+.+.|+|++++++||+++|||++....+      ...++..+  +.  .++.+....+   ...+. .++..|++
T Consensus       179 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~-~~~~~hia  248 (338)
T 1zsw_A          179 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRND------QEAIFQSIKGEAFGEIVVKYLDGP---TEKPG-RGSIHHLA  248 (338)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEESSTTCSTTCEEEEECCSS---BCBCC-BTCEEEEE
T ss_pred             ceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC------CeEEEEecCCCCceEEEEeccCCC---CCCCC-CCceEEEE
Confidence            335688999999999999999999999975321      12445552  22  3444332111   01111 23468999


Q ss_pred             EEEC---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEee
Q 030725          126 IAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       126 f~V~---dld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |.|+   |+++++++|+++|+++...  .++.+.+||+|||||.|||++.
T Consensus       249 f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~  298 (338)
T 1zsw_A          249 IRVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  298 (338)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             EEeCCHHHHHHHHHHHHHCCCceeeeeecCceEEEEEECCCCCEEEEEEc
Confidence            9998   6899999999999988522  3567889999999999999975

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.57  E-value=4.1e-14  Score=113.79  Aligned_cols=115  Identities=15%  Similarity=0.068  Sum_probs=79.9

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeE-EEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEM-IHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~-l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ...++.|.|+|++++++||+++||++.....+ ........++..++.. ..+...+...     +...+...+++|.|+
T Consensus        32 ~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~-~~~~~~~~~~~~~g~~~~~l~~~~~~~-----~~~~~~~~~~~~~v~  105 (282)
T 3oxh_A           32 TPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPV-PGGGGVYSMATLNGEAVAAIAPMPPGA-----PEGMPPIWNTYIAVD  105 (282)
T ss_dssp             SEEEEEEEESCHHHHHHHHHHHHCCEEEEEC------CCEEEEEETTEEEEEEEECCSCC--------CCCEEEEEEECS
T ss_pred             CcEEEEEecCCHHHHHHHHHHhcCcEEeecCC-CCCccCEEEEEeCCeeeEeeccCCCCC-----CCCCCCcEEEEEEeC
Confidence            35689999999999999999999999865322 1110023345555543 3444333111     111233478999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          130 DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      |+++++++|+++|+++...    ....+.++|+|||||.|||++..
T Consensus       106 d~d~~~~~l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~  151 (282)
T 3oxh_A          106 DVDAVVDKVVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQAN  151 (282)
T ss_dssp             CHHHHHTTTTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEES
T ss_pred             CHHHHHHHHHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEcc
Confidence            9999999999999998632    33457899999999999999863

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.57  E-value=3.4e-14  Score=114.48  Aligned_cols=110  Identities=16%  Similarity=0.175  Sum_probs=76.6

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcc-eEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYR-GAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~-~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      .-..|+.|.|+|++++++||+++|||++...... ..+.. ..|+..++.  .+.+...+         . .+...|+||
T Consensus       149 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---------~-~g~~~hi~f  217 (307)
T 1mpy_A          149 VRFDHALMYGDELPATYDLFTKVLGFYLAEQVLD-ENGTRVAQFLSLSTKAHDVAFIHHP---------E-KGRLHHVSF  217 (307)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEC-TTCCEEEEEEESSSBSCSEEEEECS---------S-SSEEEEEEE
T ss_pred             CceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeec-CCCcEEEEEEEcCCCceeEEEecCC---------C-CCcceEEEE
Confidence            3345889999999999999999999998753221 11112 245555432  34443221         1 233689999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~---dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+   |+++++++|+++|+++...     ....+.+||+|||||.|||.+.
T Consensus       218 ~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  269 (307)
T 1mpy_A          218 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  269 (307)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEec
Confidence            999   4667789999999998522     1225689999999999999885

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.57  E-value=2.9e-14  Score=116.98  Aligned_cols=116  Identities=10%  Similarity=0.051  Sum_probs=81.0

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceE---EEEeC----CeEEEEEecCCCCCCCCCCCCCCCcce
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGA---WLWVG----AEMIHLMELPNPDPLSGRPEHGGRDRH  123 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~---~~~~g----~~~l~L~~~~~~~~~~~~p~~~g~~~H  123 (172)
                      -..|+.|.|+|++++++||+++|||+......  .......   ++..+    +..+.+++.+....  .. ....+..|
T Consensus        30 ~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~--~~-~~~~~~~h  104 (338)
T 1zsw_A           30 GHHHISMVTKNANENNHFYKNVLGLRRVKMTV--NQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR--TY-RGTNAITR  104 (338)
T ss_dssp             SEEEEEEEESCHHHHHHHHHTTTCCEEEEEEE--ETTEEEEEEEEEESTTCCTTSEEEEEECTTCCB--CB-CCBSEEEE
T ss_pred             cccEEEEEcCCHHHHHHHHHHhcCCEEEEeec--ccCCCceEEEEEcCCCCCCCCEEEEEECCCCcc--Cc-CCCCCeee
Confidence            34689999999999999999999999875321  0111111   22222    23566665442211  11 11234679


Q ss_pred             EEEEEC---CHHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEeec
Q 030725          124 TCIAIR---DVSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       124 i~f~V~---dld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ++|.|+   |+++++++|+++|+++...  .+|.+.+||+|||||.|||++..
T Consensus       105 iaf~v~~~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~  157 (338)
T 1zsw_A          105 IGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  157 (338)
T ss_dssp             EEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             EEEEcCCHHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcC
Confidence            999998   6899999999999998643  35668999999999999999863

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.56  E-value=4.6e-14  Score=115.17  Aligned_cols=107  Identities=13%  Similarity=0.116  Sum_probs=76.9

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      -..|+.+.++|++++++|| ++|||++..............|+..++.  .+.+...+         .  .+.+|++|.|
T Consensus       152 ~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~---------~--~~~~Hiaf~v  219 (323)
T 1f1u_A          152 RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN---------G--PRMHHVAFAT  219 (323)
T ss_dssp             EEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS---------B--SEEEEEEEEC
T ss_pred             eeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCC---------C--CCceEEEEEC
Confidence            3457999999999999999 9999998653221111122456655432  34443211         1  2568999999


Q ss_pred             CCHHH---HHHHHHHCCC--eEEec-----CCCceEEEEECCCCCEEEEEe
Q 030725          129 RDVSK---LKMILDKAGI--SYTLS-----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       129 ~dld~---~~~~L~~~Gv--~i~~~-----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +|+++   ++++|+++|+  ++...     .++...+||+|||||.||++.
T Consensus       220 ~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~  270 (323)
T 1f1u_A          220 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYT  270 (323)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEe
Confidence            99998   9999999999  88631     345678999999999999975

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.55  E-value=1.5e-13  Score=102.51  Aligned_cols=113  Identities=11%  Similarity=-0.006  Sum_probs=74.4

Q ss_pred             EeeeeecCC--hHHHHHHhHhccCCEEeeec-------CCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCC--CCc
Q 030725           53 AKMSVEGGI--LKKEPIRDSDKIGLEINEAR-------PHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG--GRD  121 (172)
Q Consensus        53 a~~~i~~~d--le~s~~FY~~vLG~~~~~~~-------~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~--g~~  121 (172)
                      .+..|.++|  +++|++||+++||+++....       +........+.+..++..+.+.... +..  ..+...  +..
T Consensus        26 i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~-~~~--~~~~~~~~~~g  102 (166)
T 1xy7_A           26 FKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS-SLP--GFSTAKSEGSG  102 (166)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGG-GST--TCCCCCTTSCC
T ss_pred             EEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCC-ccc--CCccccCCCCc
Confidence            355667778  99999999999999986422       1000111223356676666654321 110  011111  223


Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEEec------CCCceEEEEECCCCCEEEEEee
Q 030725          122 RHTCIAIRDVSKLKMILDKAGISYTLS------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~~~Gv~i~~~------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|++|.|+|+++++++|+++|++ ..+      .| .+.++|+||+||.|+|.+.
T Consensus       103 ~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~r~~~v~DP~G~~~~l~~~  155 (166)
T 1xy7_A          103 VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-GFKGKVTDPFGVTWIFAEK  155 (166)
T ss_dssp             CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-TEEEEEECTTSCEEEEEC-
T ss_pred             EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-cEEEEEECCCCCEEEEEee
Confidence            59999999999999999999999 632      35 6789999999999999875

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.55  E-value=2.8e-14  Score=114.67  Aligned_cols=103  Identities=15%  Similarity=0.127  Sum_probs=77.1

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.|.|+|++++++||+++|||++...+.     ....|+..++.  .+.+...+           ..+..|++|.|+
T Consensus         6 i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~-----~~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~~~~v~   69 (300)
T 2zyq_A            6 LGYLRIEATDMAAWREYGLKVLGMVEGKGAP-----EGALYLRMDDFPARLVVVPGE-----------HDRLLEAGWECA   69 (300)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTSCCEECSSCC-----SSCEEEESSSSSCSEEEEECS-----------SCEEEEEEEECS
T ss_pred             EEEEEEEeCCHHHHHHHHHHccCCEEeccCC-----CCeEEEEeCCCcEEEEEecCC-----------CCCcceEEEEeC
Confidence            4578999999999999999999999864111     12356666543  23333211           124579999997


Q ss_pred             C---HHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEee
Q 030725          130 D---VSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 d---ld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +   +++++++|+++|+++...       .++.+.+||+|||||.|||++.
T Consensus        70 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           70 NAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             SHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            5   888999999999998632       2567889999999999999985

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.55  E-value=4.8e-14  Score=113.77  Aligned_cols=103  Identities=14%  Similarity=0.111  Sum_probs=79.1

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~--~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.+.|+|++++++||+++|||+......     ....|+..++  ..+.|...+           ..+..|++|.|+
T Consensus         7 i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~~f~v~   70 (305)
T 2wl9_A            7 LGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE-----DDRIYLRMDRWHHRIVLHADG-----------SDDLAYIGWRVA   70 (305)
T ss_dssp             EEEEEEECSCHHHHHHHHTTTTCCEEECCSC-----TTEEEEECSSBSCSEEEECSS-----------CCEEEEEEEECS
T ss_pred             eeEEEEEeCCHHHHHHHHHhccCCEEeeccC-----CCeEEEEeCCCeEEEEEEECC-----------CCCeEEEEEEEC
Confidence            4689999999999999999999999874111     1245677665  346654221           124579999997


Q ss_pred             ---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEee
Q 030725          130 ---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 ---dld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                         |+++++++|+++|+++...       .++.+.+||+|||||.|||++.
T Consensus        71 ~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           71 GPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             SHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence               6999999999999998743       2446789999999999999875

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.53  E-value=3.8e-14  Score=114.26  Aligned_cols=108  Identities=10%  Similarity=0.015  Sum_probs=79.3

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~--~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      +.-..|+.+.|+|++++++||+++|||+.....+     ....|+..++  ..+.+...+..         ..+..|++|
T Consensus         5 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~-----~~~~~l~~~~~~~~~~l~~~~~~---------~~~~~~~~f   70 (307)
T 1mpy_A            5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD-----QGRVYLKAWTEVDKFSLVLREAD---------EPGMDFMGF   70 (307)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT-----TSCEEEECTTCCBSCSEEEEECS---------SCEEEEEEE
T ss_pred             cceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC-----CCcEEEEecCCCCceEEEEccCC---------CCCcceEEE
Confidence            3345689999999999999999999999975322     1235666643  22333222110         124579999


Q ss_pred             EE---CCHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          127 AI---RDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V---~dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|   +|+++++++|+++|+++...     .++.+.+||+|||||.|||++.
T Consensus        71 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  122 (307)
T 1mpy_A           71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (307)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             EeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEc
Confidence            99   78999999999999988643     2456789999999999999984

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.53  E-value=5.5e-14  Score=115.51  Aligned_cols=110  Identities=10%  Similarity=-0.014  Sum_probs=76.1

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCC-----------CCCcceEEEEeCC----eEEEEEecCCCCCCCCCCC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHD-----------KLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPE  116 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~~~~g~----~~l~L~~~~~~~~~~~~p~  116 (172)
                      ..|+.|.|+|++++++||+++|||++.......           ...+...++.+++    ..++|.......    ...
T Consensus        28 i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~----~~~  103 (330)
T 3zi1_A           28 ALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVG----DYK  103 (330)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCC----CCC
T ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCC----ccc
Confidence            458999999999999999999999986532211           1122234455442    246665432211    111


Q ss_pred             CCCCcceEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEEee
Q 030725          117 HGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       117 ~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .+.+..|+||.|+|+   .++++++|+++.....  ..+||+|||||.|||++.
T Consensus       104 ~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~~--~~~~~~DPdG~~iel~~~  152 (330)
T 3zi1_A          104 LGNDFMGITLASSQA---VSNARKLEWPLTEVAE--GVFETEAPGGYKFYLQNR  152 (330)
T ss_dssp             BCSSEEEEEEECHHH---HHHHHHHTCCCEEEET--TEEEEECTTSCEEEEESS
T ss_pred             cCCCeeEEEEECchH---HHHHHHcCCceeccCC--ceEEEECCCCCEEEEEec
Confidence            233578999999987   6778889999875443  378999999999999985

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.53  E-value=7.2e-14  Score=112.69  Aligned_cols=104  Identities=14%  Similarity=0.034  Sum_probs=77.5

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC--eEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA--EMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~--~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      -..|+.+.|+|++++++||+++|||++... .    .....|+..+.  ..+.+....           ..+..|++|.|
T Consensus         9 ~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~-~----~~~~~~~~~~~~~~~l~l~~~~-----------~~~~~~~~~~v   72 (302)
T 2ehz_A            9 ELGYMGISVKDPDAWKSFATDMLGLQVLDE-G----EKDRFYLRMDYWHHRIVVHHNG-----------QDDLEYLGWRV   72 (302)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEECC-S----CSSEEEEESSSBSCSEEEESSC-----------CSEEEEEEEEE
T ss_pred             EeeEEEEEeCCHHHHHHHHHhcCCCEEEec-c----CCcceEEEeCCCceEEEEecCC-----------CCCeeEEEEEE
Confidence            346899999999999999999999998752 1    11345666543  234443211           12357999999


Q ss_pred             C---CHHHHHHHHHHCCCeEEecC-------CCceEEEEECCCCCEEEEEee
Q 030725          129 R---DVSKLKMILDKAGISYTLSK-------SGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~---dld~~~~~L~~~Gv~i~~~~-------~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +   |+++++++|+++|+++....       ++.+.+||+|||||.|||++.
T Consensus        73 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  124 (302)
T 2ehz_A           73 AGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWG  124 (302)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEEC
Confidence            5   68999999999999986431       456789999999999999875

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.52  E-value=5.7e-14  Score=114.08  Aligned_cols=103  Identities=13%  Similarity=0.115  Sum_probs=77.5

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      -..|+.+.|+|++++.+||+++|||++.....     ....|+..++.  .+.+...         +   .+.+|++|.|
T Consensus       141 ~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~-----~~~~fl~~~~~~~~l~l~~~---------~---~g~~hi~f~v  203 (310)
T 3b59_A          141 KISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG-----DFMCFLRCNSAHHRIAILPG---------P---PCLNHVAYDM  203 (310)
T ss_dssp             EEEEEEEEETTHHHHHHHHHHTSCCEEEEEET-----TTEEEEESSSBSCSEEEEES---------S---SEEEEEEEEC
T ss_pred             EeceEEEecCCHHHHHHHHHhCCCCEEEEeeC-----CeEEEEecCCCcceEEEECC---------C---CceEEEEEEc
Confidence            34578999999999999999999999875321     13567766543  2444321         1   2368999999


Q ss_pred             CCHHHH---HHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          129 RDVSKL---KMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~dld~~---~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +|++++   +++|+++|+++...     .++.+++||+|||||.||+.+.
T Consensus       204 ~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~  253 (310)
T 3b59_A          204 LSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSE  253 (310)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            998777   99999999987532     2345789999999999999874

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.51  E-value=1.9e-13  Score=109.57  Aligned_cols=108  Identities=10%  Similarity=0.103  Sum_probs=75.3

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCC---CCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHD---KLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~---~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      ..|+.+.|+|++++++||+++|||++.......   .......|+..++.  .+.+...         |. .++.+|++|
T Consensus       143 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~---------~~-~~~~~hiaf  212 (297)
T 1lgt_A          143 LGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAF---------PL-PKRIHHFML  212 (297)
T ss_dssp             SCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC---------CC-SSSEEEEEE
T ss_pred             cceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcC---------CC-CCCceEEEE
Confidence            457889999999999999999999986421100   00122356555432  3444431         11 234689999


Q ss_pred             EECCHHHHH---HHHHHCCCeEEec----CCC-ceEEEEECCCCCEEEEEee
Q 030725          127 AIRDVSKLK---MILDKAGISYTLS----KSG-RPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~dld~~~---~~L~~~Gv~i~~~----~~g-~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+|++++.   ++ +++|+++...    .++ ..++||+|||||.|||++.
T Consensus       213 ~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~  263 (297)
T 1lgt_A          213 EVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWS  263 (297)
T ss_dssp             EBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEEC
T ss_pred             eCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecC
Confidence            999988776   88 9999998632    233 4568999999999999874

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.51  E-value=2.6e-13  Score=113.32  Aligned_cols=104  Identities=19%  Similarity=0.112  Sum_probs=78.4

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHT  124 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~----~l~L~~~~~~~~~~~~p~~~g~~~Hi  124 (172)
                      +.-.+|+.+.|+|++++++||+++|||++..+.+      ..+|+..++.    .+.+.+.+           ..+..|+
T Consensus        15 I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~~-----------~~gl~~~   77 (365)
T 4ghg_A           15 ILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKGP-----------VAALKAM   77 (365)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------SCEEEEE
T ss_pred             CCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccCC-----------CCCcceE
Confidence            4556799999999999999999999999976322      3456665432    13332211           1246899


Q ss_pred             EEEECC---HHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEe
Q 030725          125 CIAIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       125 ~f~V~d---ld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +|.|.+   ++++.++|+++|+++...     ..+.+.+||+|||||.|||+.
T Consensus        78 a~~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~  130 (365)
T 4ghg_A           78 AFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFF  130 (365)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEE
Confidence            999974   788999999999998742     345678999999999999975

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.51  E-value=1.7e-13  Score=111.28  Aligned_cols=103  Identities=18%  Similarity=0.174  Sum_probs=79.4

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC----eEEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA----EMIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~----~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      -..++.+.|+|++++++||+++|||++....+      ...++..++    ..+.|.+.+           ..+..|++|
T Consensus         8 ~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~~~~~   70 (310)
T 3b59_A            8 EIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRAD-----------ENRIDVIAL   70 (310)
T ss_dssp             EEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEECS-----------SCEEEEEEE
T ss_pred             eeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEECC-----------CCCeeEEEE
Confidence            34578999999999999999999999875321      345677655    345554321           124579999


Q ss_pred             EE---CCHHHHHHHHHHCCCeEEe------cCCCceEEEEECCCCCEEEEEee
Q 030725          127 AI---RDVSKLKMILDKAGISYTL------SKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V---~dld~~~~~L~~~Gv~i~~------~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|   +|+++++++|+++|+++..      ..++.+.++|+|||||.|||++.
T Consensus        71 ~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  123 (310)
T 3b59_A           71 AADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSD  123 (310)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEEC
T ss_pred             EeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEc
Confidence            99   6899999999999998863      23567889999999999999875

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.51  E-value=3.7e-13  Score=110.76  Aligned_cols=105  Identities=11%  Similarity=0.079  Sum_probs=78.1

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-C---eEEEEEecCCCCCCCCCCCCCCCcceE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-A---EMIHLMELPNPDPLSGRPEHGGRDRHT  124 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~---~~l~L~~~~~~~~~~~~p~~~g~~~Hi  124 (172)
                      +.-..++.|.|+|++++++||+++|||++.....      ...|+... +   ..+.+...+           ..+..|+
T Consensus         9 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~g~~~~   71 (339)
T 3lm4_A            9 IAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEAP-----------EAGMGHA   71 (339)
T ss_dssp             EEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEECS-----------SCEEEEE
T ss_pred             CcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeCC-----------CCCcceE
Confidence            3445689999999999999999999999975311      24555542 2   123332211           1246899


Q ss_pred             EEEECC---HHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEee
Q 030725          125 CIAIRD---VSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       125 ~f~V~d---ld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +|.|+|   +++++++|+++|+++...   .++.+.+||+|||||.|||+..
T Consensus        72 af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~  123 (339)
T 3lm4_A           72 AMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWE  123 (339)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEe
Confidence            999997   889999999999998743   3556889999999999999763

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.51  E-value=1.2e-13  Score=111.34  Aligned_cols=108  Identities=11%  Similarity=0.042  Sum_probs=74.4

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCC--CC-CcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      ..|+.+.|+|++++++|| ++|||+........  .. .....|+..++.  .+.+...         +. .++.+|++|
T Consensus       147 i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~hiaf  215 (305)
T 2wl9_A          147 LGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVG---------PM-DKRINHLMI  215 (305)
T ss_dssp             SCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCS---------CC-SSSEEEEEE
T ss_pred             eeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecC---------CC-CCCceEEEE
Confidence            457899999999999999 99999986421100  00 123456665432  2333211         11 234689999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRD---VSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~d---ld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+|   +++++++|+++|+++...     ..+..++||+|||||.|||+..
T Consensus       216 ~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  267 (305)
T 2wl9_A          216 EYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWG  267 (305)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeC
Confidence            9998   566788999999998632     2335678999999999999863

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.50  E-value=1.2e-12  Score=95.89  Aligned_cols=113  Identities=12%  Similarity=-0.052  Sum_probs=75.1

Q ss_pred             EEeeeeecC-ChHHHHHHhHhccCCEEeeecC--CC--------C--CCcceEEEEeCCeEEEEEecCCCCCCCCCCCCC
Q 030725           52 KAKMSVEGG-ILKKEPIRDSDKIGLEINEARP--HD--------K--LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG  118 (172)
Q Consensus        52 ~a~~~i~~~-dle~s~~FY~~vLG~~~~~~~~--~~--------~--~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~  118 (172)
                      +....+.++ |+++|++||+++||+++.....  +.        .  .....+-+.+++..+.+.... +.  ...+...
T Consensus         4 ~~~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~-~~--~~~~~~~   80 (149)
T 1u6l_A            4 QIVPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNH-PA--YPYEGIK   80 (149)
T ss_dssp             EEEEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECC-TT--SCCCCCC
T ss_pred             eEEEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCC-Cc--cCCCCCC
Confidence            344556667 9999999999999999864211  00        0  011122355677666554321 11  0111111


Q ss_pred             CCcceEEEEECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          119 GRDRHTCIAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~d---ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                       + .+++|.|+|   +++++++|+ +|.++..+    .||.+.++|+||+||.|+|.+.
T Consensus        81 -g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~  136 (149)
T 1u6l_A           81 -G-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  136 (149)
T ss_dssp             -S-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             -c-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccceEEEECCCCCEEEEEEe
Confidence             2 589999998   789999985 78887632    6888889999999999999875

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.48  E-value=2.6e-13  Score=108.61  Aligned_cols=108  Identities=14%  Similarity=0.083  Sum_probs=74.0

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCC--CC-CcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      ..|+.+.|+|++++++||+++|||+........  .. .....|+..++.  .+.+.+.+         . .++.+|++|
T Consensus       143 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~hiaf  212 (292)
T 1kw3_B          143 IGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFP---------I-PKRIHHFML  212 (292)
T ss_dssp             SCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCS---------C-SSSEEEEEE
T ss_pred             cceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCC---------C-CCceEEEEE
Confidence            357899999999999999999999986421100  00 112346665432  34443211         1 234689999


Q ss_pred             EECCHHH---HHHHHHHCCCeEEec-----CCCceEEEEECCCCC-EEEEEee
Q 030725          127 AIRDVSK---LKMILDKAGISYTLS-----KSGRPAIFTRDPDAN-ALEFTQV  170 (172)
Q Consensus       127 ~V~dld~---~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn-~iEl~e~  170 (172)
                      .|+|+++   ++++|+ +|+++...     ..+.+++||+||||| .|||.+.
T Consensus       213 ~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~  264 (292)
T 1kw3_B          213 QANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWG  264 (292)
T ss_dssp             EBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEEC
Confidence            9998765   667999 99987633     223567899999999 9999874

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.48  E-value=1.9e-13  Score=110.25  Aligned_cols=108  Identities=11%  Similarity=0.054  Sum_probs=72.8

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCC--CC-CcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHD--KL-PYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~--~~-~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      ..|+.+.|+|++++++|| ++|||+.......+  .. .....|+..++.  .+.+...         +. .++.+|+||
T Consensus       150 l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~hiaf  218 (302)
T 2ehz_A          150 LGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGAM---------PA-AKRLNHLML  218 (302)
T ss_dssp             SCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECSC---------CC-SSSEEEEEE
T ss_pred             cceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEecC---------CC-CCceeEEEE
Confidence            357899999999999999 99999876321100  00 112345554432  2222211         11 234689999


Q ss_pred             EECCHHH---HHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRDVSK---LKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~dld~---~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+|+++   ++++|+++|+++...     .++.+++||+|||||.|||+..
T Consensus       219 ~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~  270 (302)
T 2ehz_A          219 EYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWR  270 (302)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEEC
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEEC
Confidence            9998765   667999999998632     2345689999999999999764

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.47  E-value=5e-13  Score=109.00  Aligned_cols=105  Identities=17%  Similarity=0.107  Sum_probs=78.6

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe-CC---eEEEEEecCCCCCCCCCCCCCCCcceE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV-GA---EMIHLMELPNPDPLSGRPEHGGRDRHT  124 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~-g~---~~l~L~~~~~~~~~~~~p~~~g~~~Hi  124 (172)
                      +.-..++.+.|+|++++++||+++|||+.....+      ...++.. ++   ..+.+.+..           ..+..|+
T Consensus        15 i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~~-----------~~~~~~~   77 (323)
T 1f1u_A           15 IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQGP-----------IAAVAAF   77 (323)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEECS-----------SCEEEEE
T ss_pred             cceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEECC-----------CCCeeEE
Confidence            3345689999999999999999999999875311      2456664 32   234443211           1235799


Q ss_pred             EEEE---CCHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          125 CIAI---RDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       125 ~f~V---~dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +|.|   +|+++++++|+++|+++...     .++.+.++|+|||||.|||++.
T Consensus        78 ~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~  131 (323)
T 1f1u_A           78 AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  131 (323)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEe
Confidence            9999   68999999999999998743     2456789999999999999875

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.47  E-value=3.5e-12  Score=91.76  Aligned_cols=110  Identities=8%  Similarity=-0.068  Sum_probs=74.4

Q ss_pred             eeeecC--ChHHHHHHhHhcc-CCEEeee--cCCC----CCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEE
Q 030725           55 MSVEGG--ILKKEPIRDSDKI-GLEINEA--RPHD----KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTC  125 (172)
Q Consensus        55 ~~i~~~--dle~s~~FY~~vL-G~~~~~~--~~~~----~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~  125 (172)
                      ..+.++  |.++|++||+++| |+++...  .++.    ......+-+.+++..+.+...... +.  .+  .+....++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~-~~--~~--~~~~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVR-HA--FD--FTPAFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSC-CS--CC--CCTTEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCCC-CC--CC--CCCceEEE
Confidence            445555  9999999999999 9998641  1110    011112335667665554432210 11  11  12235799


Q ss_pred             EEECC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          126 IAIRD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       126 f~V~d---ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |.|+|   +++++++|. +|.++..+    .||.+.++|+||+||.|+|.++
T Consensus        84 ~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence            99999   999999999 99988733    6788889999999999999874

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.44  E-value=6e-13  Score=110.03  Aligned_cols=122  Identities=11%  Similarity=0.087  Sum_probs=82.7

Q ss_pred             eeEEEeeeeecC--ChHHHHHHhHhccCCEEeeec--CCCCCCcceEEEEeC--CeEEEEEecCCCCCCCC-----CCCC
Q 030725           49 LTTKAKMSVEGG--ILKKEPIRDSDKIGLEINEAR--PHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSG-----RPEH  117 (172)
Q Consensus        49 l~~~a~~~i~~~--dle~s~~FY~~vLG~~~~~~~--~~~~~~~~~~~~~~g--~~~l~L~~~~~~~~~~~-----~p~~  117 (172)
                      +.-..|+.+.|.  |++++.+||+++|||+.....  ..........|+..+  ...+.|++.........     ....
T Consensus       156 ~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~  235 (357)
T 2r5v_A          156 LLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDHQ  235 (357)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHHHHT
T ss_pred             cceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHHhcC
Confidence            334558999999  999999999999999986421  100111234566664  34677766432110000     0001


Q ss_pred             CCCcceEEEEECCHHHHHHHHHHCCCeEEecC------CCc---------------eEEEEECCCCCEEEEEee
Q 030725          118 GGRDRHTCIAIRDVSKLKMILDKAGISYTLSK------SGR---------------PAIFTRDPDANALEFTQV  170 (172)
Q Consensus       118 ~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~------~g~---------------~~~y~~DPDGn~iEl~e~  170 (172)
                      +++.+|+||.|+|+++++++|+++|+++...+      ++.               ..+|++||||++|||++.
T Consensus       236 ~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          236 GAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             SSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             CCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            34678999999999999999999999976331      111               368999999999999883

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.29  E-value=6.1e-11  Score=99.19  Aligned_cols=120  Identities=12%  Similarity=0.029  Sum_probs=82.8

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecC--CCCCCcceEEEEeCCeEEEEEecCCCCCC----CCC--CCCCCCcce
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARP--HDKLPYRGAWLWVGAEMIHLMELPNPDPL----SGR--PEHGGRDRH  123 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~--~~~~~~~~~~~~~g~~~l~L~~~~~~~~~----~~~--p~~~g~~~H  123 (172)
                      ..|+.+.|.|++++++||+++|||+......  .+........+..|+..+.|.....+...    ...  ..++.+..|
T Consensus        23 i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~gv~~  102 (381)
T 1t47_A           23 MDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGVVD  102 (381)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEEEE
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHhcCCceEE
Confidence            4689999999999999999999999876321  01112233345567766776643111100    000  011345789


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEecC------C-CceEEEEECCCCCEEEEEeec
Q 030725          124 TCIAIRDVSKLKMILDKAGISYTLSK------S-GRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       124 i~f~V~dld~~~~~L~~~Gv~i~~~~------~-g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +||+|+|+++++++|+++|+++...+      . ..+.++|+||+|+.+||+++.
T Consensus       103 iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A          103 LAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            99999999999999999999987321      1 235688999999999999863

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.27  E-value=1.3e-10  Score=84.36  Aligned_cols=101  Identities=7%  Similarity=0.005  Sum_probs=68.1

Q ss_pred             CChHHHHHHhHhcc-CCEEeeec--CCC----CCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC--
Q 030725           60 GILKKEPIRDSDKI-GLEINEAR--PHD----KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD--  130 (172)
Q Consensus        60 ~dle~s~~FY~~vL-G~~~~~~~--~~~----~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d--  130 (172)
                      .|.++|++||+++| |+++....  .+.    ......+.+.+++..+.+.... +.    .   ... ..+++.|+|  
T Consensus        14 ~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~-~~----~---~~~-~sl~~~~~d~~   84 (139)
T 1tsj_A           14 NQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDAN-SG----T---ELP-ISLFVTVKDTI   84 (139)
T ss_dssp             SCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC---------------C-CCEEEECSSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCC-CC----C---Cce-EEEEEECCCHH
Confidence            49999999999999 99986321  100    0111223366676654443211 11    0   111 468899987  


Q ss_pred             -HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          131 -VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       131 -ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                       +++++++|. +|.++..+    .||.+..+|+||+|+.|+|...
T Consensus        85 evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  128 (139)
T 1tsj_A           85 EMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (139)
T ss_dssp             HHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeec
Confidence             788899998 79988732    7999999999999999999864

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.27  E-value=1.6e-11  Score=102.42  Aligned_cols=106  Identities=16%  Similarity=0.177  Sum_probs=72.6

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeE--EEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~--l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.+.+.|++++.+||++ |||................|+..+...  +.+...           ..++.+|++|+|+
T Consensus       153 lgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~-----------~~~~lhHvaf~v~  220 (365)
T 4ghg_A          153 LDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGG-----------NGPRLHHVAFSTH  220 (365)
T ss_dssp             EEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEES-----------SBSEEEEEEEECS
T ss_pred             eeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeecC-----------CCCceeEEEEecC
Confidence            45788999999999999975 999886533211222334566654332  333221           1246899999999


Q ss_pred             CHHHH---HHHHHHCCCeE--Ee--c---CCCceEEEEECCCCCEEEEEe
Q 030725          130 DVSKL---KMILDKAGISY--TL--S---KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       130 dld~~---~~~L~~~Gv~i--~~--~---~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      |++++   .++|+++|+..  ..  .   .....++||+||+||.||+..
T Consensus       221 d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t  270 (365)
T 4ghg_A          221 EKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYT  270 (365)
T ss_dssp             SHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             CHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEc
Confidence            88764   57888899853  22  1   244567999999999999975

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.26  E-value=3e-10  Score=85.53  Aligned_cols=111  Identities=9%  Similarity=-0.148  Sum_probs=75.6

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCC--------------CCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCC
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDK--------------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGG  119 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~--------------~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g  119 (172)
                      ...|..+|.++|++||+++||+++....+.+.              ...-.+.+.+++..+.+......     .+. .+
T Consensus        28 ~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~g~-----~~~-~~  101 (172)
T 3l20_A           28 FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSFGR-----ADK-IN  101 (172)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECTTC-----CCC-CC
T ss_pred             EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCCCC-----CCC-CC
Confidence            34455569999999999999999764322111              11123456778877776553211     111 12


Q ss_pred             CcceEEEEE--------CCHHHHHHHHHHCC-CeEEe----cCCCceEEEEECCCCCEEEEEee
Q 030725          120 RDRHTCIAI--------RDVSKLKMILDKAG-ISYTL----SKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       120 ~~~Hi~f~V--------~dld~~~~~L~~~G-v~i~~----~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ....+++.+        +|+++++++|.++| +++..    ..||.+..+|+||+||.|+|...
T Consensus       102 ~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~~  165 (172)
T 3l20_A          102 NGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQ  165 (172)
T ss_dssp             SSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEEE
T ss_pred             CcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEeC
Confidence            234677777        57899999999999 67763    36898999999999999999653

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.22  E-value=4.1e-11  Score=98.99  Aligned_cols=118  Identities=14%  Similarity=0.029  Sum_probs=81.1

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCC--CCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS--GRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~--~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+.+.|.|++++.+||+++|||+.......  .......+..|+..+.|.....+....  ....++.+..|+||.|+
T Consensus         6 l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~--~~g~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~iaf~V~   83 (357)
T 2r5v_A            6 IDYVEMYVENLEVAAFSWVDKYAFAVAGTSRS--ADHRSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADIAMATS   83 (357)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHCCEEEEEEEE--TTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEEEEEES
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCCeEEEEEcC--CCceEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEEEEEEC
Confidence            46899999999999999999999998753220  111222345676666665421111000  00011345689999999


Q ss_pred             CHHHHHHHHHHCCCeEEec----CCC-ceEEEEECCCCCEEEEEeec
Q 030725          130 DVSKLKMILDKAGISYTLS----KSG-RPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       130 dld~~~~~L~~~Gv~i~~~----~~g-~~~~y~~DPDGn~iEl~e~~  171 (172)
                      |+++++++++++|+++...    ..| .+.++|+||+|..++|+++.
T Consensus        84 D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           84 DVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             CHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             CHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            9999999999999998632    123 35788999999999999863

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.22  E-value=2.2e-10  Score=97.35  Aligned_cols=120  Identities=13%  Similarity=0.044  Sum_probs=82.9

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCC--CCCCcceEEEEeCCeEEEEEecCCCCC---------CCCCC-----
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDP---------LSGRP-----  115 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~~~g~~~l~L~~~~~~~~---------~~~~p-----  115 (172)
                      ..|+.+.|.|+++|++||+++|||++......  +...+...++..|+..+.|.....+..         ....|     
T Consensus        26 i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~p~~~~~~~  105 (424)
T 1sqd_A           26 FHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHG  105 (424)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTTCCHH
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCcccccccccccccccccccch
Confidence            46899999999999999999999998754221  111222334556776777765421110         00000     


Q ss_pred             -------CCCCCcceEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          116 -------EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       116 -------~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                             .++.+..|+||+|+|+++++++|+++|+++...    ..+.+...|++|+|+.++|+++.
T Consensus       106 ~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A          106 SCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             HHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             HHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecC
Confidence                   112457899999999999999999999998633    23445677888999999988764

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.17  E-value=1.1e-09  Score=79.47  Aligned_cols=103  Identities=6%  Similarity=-0.119  Sum_probs=70.6

Q ss_pred             ChHHHHHHhHhccC-CEEeee--cC----CCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC---
Q 030725           61 ILKKEPIRDSDKIG-LEINEA--RP----HDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD---  130 (172)
Q Consensus        61 dle~s~~FY~~vLG-~~~~~~--~~----~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d---  130 (172)
                      |.+++++||+++|| .++...  .+    ......-.+.+.+++..+.+........    .. .+....+++.|+|   
T Consensus        20 ~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~~~~----~~-~~~~~~l~l~~~d~~e   94 (138)
T 3oms_A           20 KAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYVNHN----FT-FTPAMSLYVTCETEEE   94 (138)
T ss_dssp             CHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSSCCS----CC-CCTTSCEEEEESSHHH
T ss_pred             CHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCCCCC----CC-CCCCEEEEEEcCCHHH
Confidence            79999999999999 566421  11    0111122455777887777654321110    01 1223579999999   


Q ss_pred             HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          131 VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       131 ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +++++++|. +|.++..+    .||.+..+++||+|+.|+|.-
T Consensus        95 vd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           95 IDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             HHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEe
Confidence            999999995 57787632    688889999999999999864

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.04  E-value=4.5e-09  Score=89.14  Aligned_cols=123  Identities=11%  Similarity=-0.001  Sum_probs=81.9

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCC--CCCcceEEEEeCCeEEEEEecCCCCC---CCCCC--------
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHD--KLPYRGAWLWVGAEMIHLMELPNPDP---LSGRP--------  115 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~--~~~~~~~~~~~g~~~l~L~~~~~~~~---~~~~p--------  115 (172)
                      +.-..|+.+.|.|++++.+||++.|||++.......  ........+..|+..+.|.+...+..   ....|        
T Consensus        29 i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~~~~~  108 (418)
T 1sp8_A           29 TLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAAR  108 (418)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHHH
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccchhHH
Confidence            334578999999999999999999999987542210  11223334566777777765422210   00000        


Q ss_pred             ----CCCCCcceEEEEECCHHHHHHHHHHCCCeEEecC----CCceEEEEECCCCCEEEEEeec
Q 030725          116 ----EHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSK----SGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       116 ----~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~----~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                          .++.+.+|+||+|+|+++++++++++|+++...+    .+.+..++++|.|..++|+++.
T Consensus       109 ~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          109 RFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             HHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             HHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEccC
Confidence                1124578999999999999999999999886431    2334556677777777777653

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.03  E-value=5.6e-10  Score=93.33  Aligned_cols=122  Identities=11%  Similarity=0.012  Sum_probs=78.7

Q ss_pred             eeEEEeeeeecC--ChHHHHHHhHhccCCEEeeecC-----CCCCCcceEEEEeC--CeEEEEEecCCCCCCCC-----C
Q 030725           49 LTTKAKMSVEGG--ILKKEPIRDSDKIGLEINEARP-----HDKLPYRGAWLWVG--AEMIHLMELPNPDPLSG-----R  114 (172)
Q Consensus        49 l~~~a~~~i~~~--dle~s~~FY~~vLG~~~~~~~~-----~~~~~~~~~~~~~g--~~~l~L~~~~~~~~~~~-----~  114 (172)
                      +.-..|+.+.|.  |++++.+||+++|||+......     .........++..+  ...+.|.+.........     .
T Consensus       182 ~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~~l~  261 (381)
T 1t47_A          182 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLE  261 (381)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHH
T ss_pred             ceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHHHHH
Confidence            344568889888  9999999999999999865311     00111122333332  23566655431111000     0


Q ss_pred             CCCCCCcceEEEEECCHHHHHHHHHHCCCeEEecCC-------------C--------ceEEEEECCCCCEEEEEee
Q 030725          115 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLSKS-------------G--------RPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       115 p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~~-------------g--------~~~~y~~DPDGn~iEl~e~  170 (172)
                      ...+++.+|+||.|+|+++++++|+++|+++...+.             +        ...+|-+||+|.++++++.
T Consensus       262 ~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~  338 (381)
T 1t47_A          262 FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTK  338 (381)
T ss_dssp             HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBC
T ss_pred             HhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEecc
Confidence            012345799999999999999999999999863310             0        1247789999999998764

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.03  E-value=8.4e-09  Score=81.24  Aligned_cols=105  Identities=12%  Similarity=0.022  Sum_probs=69.1

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceE---EEEE
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHT---CIAI  128 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi---~f~V  128 (172)
                      +.++.|+|++++.+||+++|||++..+.      ...+++..++.  .+.|-+.+...   .++  ..+..|+   ++.|
T Consensus        13 ~p~LrV~nr~~~~~FY~~vlG~kll~ee------~~~a~lg~~~~~~~L~lEEsp~~~---~~~--~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           13 IPTLKANNRKLNETFYIETLGMKALLEE------SAFLSLGDQTGLEKLVLEEAPSMR---TRK--VEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEESSHHHHHHHHTTTTCCEEEEEC------SSEEEEECTTCCEEEEEEECCTTT---CBC--CCSSCSEEEEEEEE
T ss_pred             eeEEEECCHHHHHHHHHhccCcEEeecc------CcEEEeecCCCcceEEEEeCCCcc---ccc--ccccceeeeEEEEc
Confidence            5788899999999999999999987632      13455555332  23333323211   111  2344677   5999


Q ss_pred             CCHHHHHHHHHHCCCeEE--ecCCCceEEEEECCCCCEEEEEee
Q 030725          129 RDVSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~--~~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++.+++-..|.. +..+.  -......++|+.||+||.||++..
T Consensus        82 p~~~el~~lL~~-~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae  124 (244)
T 3e0r_A           82 ENPLEIEGILSK-TDSIHRLYKGQNGYAFEIFSPEDDLILIHAE  124 (244)
T ss_dssp             SSHHHHHHHHTT-CSCCSEEEECSSSEEEEEECTTCCEEEEECC
T ss_pred             CCHHHHHHHHhc-ccccccccccCCcEEEEEECCCCCeEEEEEc
Confidence            998888776655 55442  222234589999999999999864

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.00  E-value=3.1e-10  Score=93.96  Aligned_cols=121  Identities=14%  Similarity=0.032  Sum_probs=79.2

Q ss_pred             eeEEEeeeeecC--ChHHHHHHhHhccCCEEeeecCCCCCCcce---EEEEe--CCeEEEEEec-CCCCCCCC---CCCC
Q 030725           49 LTTKAKMSVEGG--ILKKEPIRDSDKIGLEINEARPHDKLPYRG---AWLWV--GAEMIHLMEL-PNPDPLSG---RPEH  117 (172)
Q Consensus        49 l~~~a~~~i~~~--dle~s~~FY~~vLG~~~~~~~~~~~~~~~~---~~~~~--g~~~l~L~~~-~~~~~~~~---~p~~  117 (172)
                      +.-..|+.+.|.  |++++.+||+++|||+....... ...+.+   .++..  +...+.|.+. ........   ....
T Consensus       156 i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~-~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~~~  234 (357)
T 1cjx_A          156 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDI-KGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN  234 (357)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEE-ECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             eeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEe-ccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHhcC
Confidence            444568999999  99999999999999998653210 011111   12222  4457777765 21110000   0012


Q ss_pred             CCCcceEEEEECCHHHHHHHHHHCCCeEEe-cC-------------CCc--------eEEEEEC----CCCCEEEEEee
Q 030725          118 GGRDRHTCIAIRDVSKLKMILDKAGISYTL-SK-------------SGR--------PAIFTRD----PDANALEFTQV  170 (172)
Q Consensus       118 ~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~-~~-------------~g~--------~~~y~~D----PDGn~iEl~e~  170 (172)
                      +++.+|+||.|+|+++++++|+++|+++.. .+             .|.        ..+|-+|    |+|++|+|++.
T Consensus       235 g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift~  313 (357)
T 1cjx_A          235 GEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFSE  313 (357)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEBC
T ss_pred             CCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEecc
Confidence            345799999999999999999999999864 21             111        1367788    89999999874

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=98.96  E-value=7.4e-10  Score=91.66  Aligned_cols=118  Identities=11%  Similarity=-0.076  Sum_probs=78.8

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      +.-..|+.+.|.|++++.+|| ++|||++..+..    ......+..|+..+.+...+..........++.+..|+||+|
T Consensus        10 i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~----~~~~~l~~~g~~~l~l~~~~~~~~~~~~~~~g~gv~~iaf~V   84 (357)
T 1cjx_A           10 LMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHR----SKNVHLYRQGEINLILNNEPNSIASYFAAEHGPSVCGMAFRV   84 (357)
T ss_dssp             EEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEES----SSSEEEEEETTEEEEEECCSSSHHHHHHHHHSSEEEEEEEEE
T ss_pred             cceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeC----CeeEEEEecCCEEEEEECCCCchhhhhhhhcCCeEEEEEEEe
Confidence            333468999999999999999 799999875322    112233555665555543211000000001234578999999


Q ss_pred             CCHHHHHHHHHHCCCeEEecC--CC-ceEEEEECCCCCEEEEEeec
Q 030725          129 RDVSKLKMILDKAGISYTLSK--SG-RPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~~--~g-~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +|+++++++++++|+++....  .| .....+++|+|..++|+++.
T Consensus        85 ~D~~~~~~~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           85 KDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             SCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             CCHHHHHHHHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCC
Confidence            999999999999999886432  22 34567889999999998754

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.92  E-value=2.8e-08  Score=83.70  Aligned_cols=122  Identities=13%  Similarity=0.046  Sum_probs=84.3

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCC--CCCCcceEEEEeCCeEEEEEecCCCCC-CCC--CCCCCCCcce
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDP-LSG--RPEHGGRDRH  123 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~~~g~~~l~L~~~~~~~~-~~~--~p~~~g~~~H  123 (172)
                      +.-..|+.+.|.|++++.+||+++|||+.......  +........+..|+..+.|.+...++. ...  ...++.+.+|
T Consensus         9 i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG~Gv~~   88 (393)
T 3isq_A            9 FLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHGDGVKD   88 (393)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEE
T ss_pred             CceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcCCcEEE
Confidence            44456899999999999999999999998763221  111112334566877777765322211 000  0012345789


Q ss_pred             EEEEECCHHHHHHHHHHCCCeEEecC------CC-ceEEEEECCCCCEEEEEee
Q 030725          124 TCIAIRDVSKLKMILDKAGISYTLSK------SG-RPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       124 i~f~V~dld~~~~~L~~~Gv~i~~~~------~g-~~~~y~~DPDGn~iEl~e~  170 (172)
                      +||+|+|+++++++++++|+++..++      .| .+..-|++|.|..+.|+++
T Consensus        89 iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           89 IAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             EEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             EEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            99999999999999999999986432      23 3567789999999999875

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=98.74  E-value=7.1e-08  Score=81.88  Aligned_cols=122  Identities=13%  Similarity=0.056  Sum_probs=78.6

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCC-----CCcceEEEEeC--CeEEEEEecCC--CCCCCC-CC---
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPN--PDPLSG-RP---  115 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~g--~~~l~L~~~~~--~~~~~~-~p---  115 (172)
                      +.-..|+.+.|.|++++.+||+++|||+.........     .+....|+..+  ...+.|.+...  ...... ..   
T Consensus       200 ~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~~~l~l~e~~~~~~~~s~i~~fl~~  279 (424)
T 1sqd_A          200 IRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEH  279 (424)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHH
T ss_pred             cceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCCCcEEEEEecccccCCCcchhhhhhhh
Confidence            4445689999999999999999999999876432111     12233455433  34677765431  111100 00   


Q ss_pred             CCCCCcceEEEEECCHHHHHHHHHH----CCCeEEecC-----------CC-------------ceEEEEECCCCCEEEE
Q 030725          116 EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTLSK-----------SG-------------RPAIFTRDPDANALEF  167 (172)
Q Consensus       116 ~~~g~~~Hi~f~V~dld~~~~~L~~----~Gv~i~~~~-----------~g-------------~~~~y~~DPDGn~iEl  167 (172)
                      ..+.+.+|+||.|+|+++++++|++    +|+++...+           -+             ...++-+|.+|.+++|
T Consensus       280 ~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llqi  359 (424)
T 1sqd_A          280 NEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQI  359 (424)
T ss_dssp             HTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEE
T ss_pred             cCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCeEEEE
Confidence            1234679999999999999999999    899987421           01             1236677888888887


Q ss_pred             Eee
Q 030725          168 TQV  170 (172)
Q Consensus       168 ~e~  170 (172)
                      ++.
T Consensus       360 ft~  362 (424)
T 1sqd_A          360 FTK  362 (424)
T ss_dssp             EBC
T ss_pred             Ecc
Confidence            753

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.72  E-value=8.5e-08  Score=81.27  Aligned_cols=99  Identities=12%  Similarity=0.005  Sum_probs=65.3

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCC-----CCcceEEEEeC--CeEEEEEecCCC--CCCCC-CC---
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDK-----LPYRGAWLWVG--AEMIHLMELPNP--DPLSG-RP---  115 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~-----~~~~~~~~~~g--~~~l~L~~~~~~--~~~~~-~p---  115 (172)
                      +....|+.+.|.|++++.+||+++|||+.........     .+....|+..+  ...+.|.+....  ..... ..   
T Consensus       197 ~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~i~l~l~e~~~~~~~~s~i~~fl~~  276 (418)
T 1sp8_A          197 LSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDH  276 (418)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHH
T ss_pred             cceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCcEEEEEeecccccCCCcchhhhhhc
Confidence            4445689999999999999999999999875321101     11233556543  345666554211  10000 00   


Q ss_pred             CCCCCcceEEEEECCHHHHHHHHHH----CCCeEEe
Q 030725          116 EHGGRDRHTCIAIRDVSKLKMILDK----AGISYTL  147 (172)
Q Consensus       116 ~~~g~~~Hi~f~V~dld~~~~~L~~----~Gv~i~~  147 (172)
                      ..+.+.+|+||.|+|+++++++|++    +|+++..
T Consensus       277 ~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~  312 (418)
T 1sp8_A          277 HGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMA  312 (418)
T ss_dssp             HTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCC
T ss_pred             cCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEcc
Confidence            1234679999999999999999999    7999874

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.57  E-value=1.4e-07  Score=79.48  Aligned_cols=98  Identities=9%  Similarity=0.002  Sum_probs=64.4

Q ss_pred             eeEEEeeeeecCC--hHHHHHHhHhccCCEEeeecCCC--CCCcce-EE--EEe--CCeEEEEEecCCCCCCCCC-----
Q 030725           49 LTTKAKMSVEGGI--LKKEPIRDSDKIGLEINEARPHD--KLPYRG-AW--LWV--GAEMIHLMELPNPDPLSGR-----  114 (172)
Q Consensus        49 l~~~a~~~i~~~d--le~s~~FY~~vLG~~~~~~~~~~--~~~~~~-~~--~~~--g~~~l~L~~~~~~~~~~~~-----  114 (172)
                      ++..-|+++.|.|  ++++.+||+++|||+........  ...+.+ .+  +..  |..++.|++..........     
T Consensus       171 l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~v~i~L~ep~~~~~~s~I~~fL~  250 (393)
T 3isq_A          171 LEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQEYVD  250 (393)
T ss_dssp             EEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSSCEEEEEEEECCSBCCHHHHHHH
T ss_pred             eeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCCEEEEEecCCCCCCCCHHHHHHH
Confidence            4555689999987  99999999999999986532110  111222 22  332  2347888754321110000     


Q ss_pred             CCCCCCcceEEEEECCHHHHHHHHHHCCCeEE
Q 030725          115 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYT  146 (172)
Q Consensus       115 p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~  146 (172)
                      ...+.+.+|+||.|+|+++.+++|+++|+++.
T Consensus       251 ~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l  282 (393)
T 3isq_A          251 YNGGAGVQHIALKTEDIITAIRHLRERGLEFL  282 (393)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHHHHTTCCBC
T ss_pred             HcCCCCcceEEEEcCCHHHHHHHHHHcCCccC
Confidence            00244589999999999999999999999986

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=98.18  E-value=3.7e-06  Score=77.05  Aligned_cols=112  Identities=16%  Similarity=0.143  Sum_probs=67.1

Q ss_pred             ecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC--CeEEEEEecCCCC-----------CCC--CCCCCC-CCc
Q 030725           58 EGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPD-----------PLS--GRPEHG-GRD  121 (172)
Q Consensus        58 ~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g--~~~l~L~~~~~~~-----------~~~--~~p~~~-g~~  121 (172)
                      ...-++++++||+++|++.......  ..-| ..++...  ...+++.-.+...           ...  ..-..| +..
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW~~~~   95 (941)
T 3opy_B           19 NISLLQASIDFYTNFLGFAIRKNSN--QKLF-WLQLEEDQNNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDWRSIQ   95 (941)
T ss_dssp             C-CC-HHHHHHHHHTTCCEECSSCS--CCC----EECCTTSCCEEEEECSSCSCHHHHHHHHHHHCCC----------CC
T ss_pred             CHHHHHHHHHHHHhhccceeccccC--Ccce-eEEEecCCCeEEEEEEeccccchhHHHHHHHHhhhhcccccccccccC
Confidence            3455899999999999998754111  1011 1122111  1234432110000           000  000122 344


Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEEecCC--CceEEEEECCCCCEEEEEeecC
Q 030725          122 RHTCIAIRDVSKLKMILDKAGISYTLSKS--GRPAIFTRDPDANALEFTQVDG  172 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~~~Gv~i~~~~~--g~~~~y~~DPDGn~iEl~e~~~  172 (172)
                      .|+.|.++|++++.+.|.+.+.++...+.  +...+|+.||+||.|+|.+..|
T Consensus        96 ~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           96 SNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISPFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSCEEECCSSCCEEEECC-CCSS
T ss_pred             ceEEEEeCCHHHHHHHHHhcCCccccCCCcCCCceEEeECCCCCEEEEeccCC
Confidence            69999999999999999999998886554  7789999999999999988653

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.11  E-value=7.9e-05  Score=55.30  Aligned_cols=101  Identities=10%  Similarity=-0.072  Sum_probs=66.4

Q ss_pred             eecC-ChHHHHHHhHhcc-CCEEee--ecCC----C-CCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           57 VEGG-ILKKEPIRDSDKI-GLEINE--ARPH----D-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        57 i~~~-dle~s~~FY~~vL-G~~~~~--~~~~----~-~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      +..+ |-+++.+||+++| |.++..  ..++    . ....-.+-|.+++..+.+.... +.    .+.  .....+++.
T Consensus        11 L~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~-p~----~~~--~~~~sl~v~   83 (163)
T 1u69_A           11 LWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-PA----FRH--SEAFSFQVA   83 (163)
T ss_dssp             EEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-TT----CCC--CTTEEEEEE
T ss_pred             EEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCC-CC----cCC--CCceEEEEE
Confidence            3444 8999999999999 998763  1111    0 1122335577888766665321 11    111  122478888


Q ss_pred             ECC---HHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEEee
Q 030725          128 IRD---VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~d---ld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      |+|   +++++++|.++|.++.      +...++||.|+.|.|...
T Consensus        84 ~~d~~e~d~~~~~L~~~Gg~v~------~~G~v~D~fGv~W~i~~~  123 (163)
T 1u69_A           84 TDDQAETDRLWNAIVDNGGEES------ACGWCRDKWGISWQITPR  123 (163)
T ss_dssp             ESSHHHHHHHHHHHHHTTCEEC------STTEEECTTSCEEEEEEH
T ss_pred             eCCHHHHHHHHHHHHhCCCEEE------EEEEEECCCCCEEEEEeE
Confidence            887   6778899988888877      233799999999998753

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=96.65  E-value=0.0017  Score=51.94  Aligned_cols=86  Identities=12%  Similarity=0.168  Sum_probs=56.1

Q ss_pred             eeeeecCChHHHHHHhHhccC-----CEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCC----------C--CCCC--
Q 030725           54 KMSVEGGILKKEPIRDSDKIG-----LEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPD----------P--LSGR--  114 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG-----~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~----------~--~~~~--  114 (172)
                      |+.+.|.+++        .||     |.+.....+...+.....+.+++..|+|+......          +  ...+  
T Consensus        27 HlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~YLElIai~~~~~~~~~~~~~~~~~~f~~~~   98 (274)
T 3p8a_A           27 HIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAFATQI   98 (274)
T ss_dssp             EEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSSEEEEEEESCHHHHHHHTTSTGGGTCTTTHH
T ss_pred             EEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCEEEEEEeecCcccccccccccCccchHHHHh
Confidence            6888888874        467     77654211112344455566677789998765321          0  0000  


Q ss_pred             --CCCCCCcceEEEEECCHHHHHHHHHHCCCeEEe
Q 030725          115 --PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTL  147 (172)
Q Consensus       115 --p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~  147 (172)
                        ...+.+..++|+.++|+++..++|.++|+.+..
T Consensus        99 ~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~  133 (274)
T 3p8a_A           99 VQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVG  133 (274)
T ss_dssp             HHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEE
T ss_pred             hhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCC
Confidence              112346799999999999999999999998763

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=94.70  E-value=0.048  Score=42.73  Aligned_cols=96  Identities=7%  Similarity=-0.031  Sum_probs=58.0

Q ss_pred             cCC-ceeeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcc
Q 030725           44 CNG-QFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR  122 (172)
Q Consensus        44 ~~~-~~l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~  122 (172)
                      +.+ +-.++  ++.+-|.|++++  ||++ +|+.           ....|..          ..+++........+ +..
T Consensus       145 ~~gLs~fti--~I~LnV~d~~~s--Fy~~-~~~~-----------~~~~F~~----------a~G~dl~~~~~~t~-gLe  197 (244)
T 3e0r_A          145 SISLSKFEI--SMELHLPTDIES--FLES-SEIG-----------ASLDFIP----------AQGQDLTVDNTVTW-DLS  197 (244)
T ss_dssp             CCCCSSEEE--EEEEEECTTCCC--SCCH-HHHT-----------TTEEEEE----------CCCTTTTCCTTSBS-SEE
T ss_pred             ccCCCCcEE--EEEEEcCchHHH--Hhhc-cCCc-----------ccEEEEc----------ccCCCCCCCCCCcc-Cce
Confidence            443 34444  788888899998  9986 4441           1112222          22222111111222 356


Q ss_pred             eEEEEEC--CHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEEe
Q 030725          123 HTCIAIR--DVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       123 Hi~f~V~--dld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      .+-|.|+  |++++.++|+++|.-+ ..  ....+.+.||.|+.|=|.+
T Consensus       198 ~l~~~v~~~dl~~l~~~L~~~g~~i-dk--k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          198 MLKFLVNELDIASLRQKFESTEYFI-PK--SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             EEEEEESSCCHHHHHHHTTTSCEEC-CT--TCCEEEEECTTSCEEEEEE
T ss_pred             EEEEEeCHHHHHHHHHHHHhCCceE-cc--cCCEEEEECCCCCEEEEEE
Confidence            7778886  6889999999987622 22  2246788999999998765

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=92.88  E-value=0.41  Score=32.16  Aligned_cols=50  Identities=10%  Similarity=0.100  Sum_probs=37.8

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          120 RDRHTCIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +.+|+++.|+|+++..+.....|.+....     ..+.+.+|+.. +|..||+.++
T Consensus         7 ~i~hv~i~v~Dl~~a~~FY~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~~   61 (133)
T 3hdp_A            7 KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVIN-GGYRVELVAP   61 (133)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCEECSCCEEETTTTEEEEEEEE-TTEEEEEEEE
T ss_pred             eeCEEEEEECCHHHHHHHHHHcCCeeecceeccCCcceEEEEEeC-CCEEEEEEec
Confidence            57899999999999999888889887522     23445556555 6778999875

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=92.33  E-value=0.45  Score=31.48  Aligned_cols=52  Identities=15%  Similarity=0.158  Sum_probs=39.5

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          120 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +..|+++.|.|+++..+...+ .|.+....    ..+...+|+.-++|..|+|.+..
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~   59 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRT   59 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEET
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecC
Confidence            357999999999999998855 68887533    23445677777779999998753

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=91.81  E-value=1.1  Score=30.53  Aligned_cols=52  Identities=12%  Similarity=0.203  Sum_probs=40.3

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEecC----------CCceEEEEECCCCCEEEEEee
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSK----------SGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~----------~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .+..|+++.|.|+++..+...+ .|.++....          .....+++.-++|..|+|.+.
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGE   80 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEEC
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEec
Confidence            4678999999999999999987 799886410          122356777788899999875

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=91.78  E-value=0.78  Score=29.82  Aligned_cols=50  Identities=20%  Similarity=0.294  Sum_probs=37.5

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCEEEEEee
Q 030725          120 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +..|+++.|.|+++..+...+ .|.++..... ....++..++|..+++.+.
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~-~~~~~~~~~~~~~l~l~~~   53 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-NAFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEET-TTEEEEECTTCCEEEEEEC
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC-CcEEEEEcCCCcEEEEEeC
Confidence            357999999999999998876 7988764322 2346677777888888764

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=91.77  E-value=0.47  Score=32.30  Aligned_cols=52  Identities=12%  Similarity=0.040  Sum_probs=40.0

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCC-----CEEEEEee
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDA-----NALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~----~~g~~~~y~~DPDG-----n~iEl~e~  170 (172)
                      .+..|+++.|.|+++..+...+ .|.++...    ..+...++++.+++     ..|||.+.
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~   69 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   69 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeec
Confidence            3578999999999999998875 79987643    12445677887775     78999875

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=91.54  E-value=0.59  Score=30.93  Aligned_cols=50  Identities=20%  Similarity=0.324  Sum_probs=37.5

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          120 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +..|+++.|.|+++..+...+ .|.++...    ..+...+++.. +|..+|+.+.
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~   59 (134)
T 3rmu_A            5 RLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNL-GNTKMELLHP   59 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEEC-SSSEEEEEEE
T ss_pred             eeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEec-CCEEEEEEec
Confidence            468999999999999999988 89987632    23444555554 6778888774

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=91.37  E-value=0.51  Score=32.35  Aligned_cols=51  Identities=12%  Similarity=0.251  Sum_probs=38.6

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEecC---------------CCceEEEEECCCC-CEEEEEee
Q 030725          120 RDRHTCIAIRDVSKLKMILDKAGISYTLSK---------------SGRPAIFTRDPDA-NALEFTQV  170 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~---------------~g~~~~y~~DPDG-n~iEl~e~  170 (172)
                      +..|+++.|.|+++..+...+.|.++....               .+...++++-++| ..|||.+.
T Consensus        11 ~i~hv~l~v~D~~~a~~FY~~lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~   77 (153)
T 1ss4_A           11 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRF   77 (153)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEE
T ss_pred             ceeeEEEEeCCHHHHHHHHHHCCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEe
Confidence            468999999999999888877899876321               2345677777777 78998864

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=90.54  E-value=0.8  Score=31.96  Aligned_cols=51  Identities=16%  Similarity=0.120  Sum_probs=37.0

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEec------------------CCCceEEEEECCCCCEEEEEee
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS------------------KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~------------------~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .+..|+++.|.|+++..+...+ .|.+....                  ..+.+.+++.. .+..|||++.
T Consensus        18 ~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~leL~~~   87 (159)
T 3gm5_A           18 RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL-GPLQLELIEP   87 (159)
T ss_dssp             GGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEE-TTEEEEEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEec-CCEEEEEEEE
Confidence            4679999999999999998876 88875421                  12334455554 4778999875

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=90.29  E-value=0.88  Score=32.01  Aligned_cols=51  Identities=12%  Similarity=0.107  Sum_probs=38.4

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .+..|+++.|.|+++..+...+ .|.++...    ..+.+.+++.. .|..|||++.
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~-g~~~l~l~~~   62 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEI-GESKIELLEP   62 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEE-TTEEEEEEEE
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeC-CCeEEEEEeE
Confidence            3578999999999999999988 89887632    23445566654 4678888875

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=89.21  E-value=1.4  Score=29.03  Aligned_cols=49  Identities=14%  Similarity=0.046  Sum_probs=35.9

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          120 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +.+|+++.|+|+++..+...+ .|.++...    ..+...+++..+ +..+||.+
T Consensus         5 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~l~l~~   58 (134)
T 3l7t_A            5 AVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG-DIELEIFG   58 (134)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET-TEEEEEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC-CeEEEEEe
Confidence            468999999999999999976 79988632    233335556654 44888877

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=88.99  E-value=1.2  Score=29.05  Aligned_cols=50  Identities=12%  Similarity=0.034  Sum_probs=36.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          120 RDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +..|+++.|.|+++..+...+ .|.++...    ..+...+++.-+++ .|+|.+.
T Consensus         5 ~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~-~l~l~~~   59 (126)
T 2p25_A            5 EIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ-ELEIFIS   59 (126)
T ss_dssp             CCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE-EEEEEEC
T ss_pred             ccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe-EEEEEec
Confidence            468999999999999999976 89987632    22333445555566 8888763

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=88.87  E-value=4.5  Score=31.17  Aligned_cols=107  Identities=14%  Similarity=0.089  Sum_probs=61.2

Q ss_pred             ecCChHHHHHHhHhccCCEEeeecCC-----CCCCcceEEEEe-CCeEEEEEecCCCCCCCCCC---CCCCCcceEEEEE
Q 030725           58 EGGILKKEPIRDSDKIGLEINEARPH-----DKLPYRGAWLWV-GAEMIHLMELPNPDPLSGRP---EHGGRDRHTCIAI  128 (172)
Q Consensus        58 ~~~dle~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~~~~-g~~~l~L~~~~~~~~~~~~p---~~~g~~~Hi~f~V  128 (172)
                      .+.+++++.+..++.  .+.....+.     ........+|.- .+..++|+..+...+....+   ....+..|+.+.|
T Consensus        89 ~~~dld~~~~rL~~~--v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~L~v  166 (252)
T 3pkv_A           89 AANHFQEGKAWLSGF--GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITT  166 (252)
T ss_dssp             CTTCHHHHHHHHTTS--SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEEEEC
T ss_pred             cHHHHHHHHHHHHhc--ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEEEEe
Confidence            445678777777665  333220010     012223344544 34578887655322211111   1123578999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCEEEE
Q 030725          129 RDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEF  167 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~-~~g~~~~y~~DPDGn~iEl  167 (172)
                      +|+++..+.++..|.+.... ....+..+.-| +|..|.+
T Consensus       167 ~d~~~~~~fl~~LG~~~~~~~~~~~~f~~~G~-~g~~i~v  205 (252)
T 3pkv_A          167 SDVEQAATRLKQAELPVKLDQIEPAGLNFIGD-QDLFLLL  205 (252)
T ss_dssp             SCHHHHHHHHHHTTCCCCGGGCCTTSCEEEEE-TTEEEEE
T ss_pred             CCHHHHHHHHHHcCCCcccCCCChheEEEcCC-CcEEEEE
Confidence            99999999997789887643 22334455567 7766655

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=88.72  E-value=3  Score=27.57  Aligned_cols=50  Identities=16%  Similarity=0.122  Sum_probs=36.6

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEec---CCC-ceEEEEECCC---CCEEEEEee
Q 030725          121 DRHTCIAIRDVSKLKMILDK-AGISYTLS---KSG-RPAIFTRDPD---ANALEFTQV  170 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~---~~g-~~~~y~~DPD---Gn~iEl~e~  170 (172)
                      ..|+++.|.|+++..+...+ .|.++...   ..+ ...+++.-++   +..|++.+.
T Consensus         3 l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   60 (135)
T 1f9z_A            3 LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYN   60 (135)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             ceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEc
Confidence            57999999999999999887 79988632   223 2345666554   688998763

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=88.49  E-value=3.7  Score=38.09  Aligned_cols=50  Identities=24%  Similarity=0.256  Sum_probs=37.2

Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEEeec
Q 030725          122 RHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ..+.|.+.|++++.+.|.+..+...+..-....+|..||=||.|-|....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEIIPSKIDLVEFSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCBCCCC--CCCEEEESSSEEEEECCSSS
T ss_pred             ceEEEEeCcHHHHHHHhhhcccccCCCCCCceeEEEecCCCCEEeeecCC
Confidence            46889999999999999987444333333344689999999999886543

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=88.15  E-value=1.9  Score=29.56  Aligned_cols=52  Identities=13%  Similarity=0.121  Sum_probs=36.9

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEE-ECCCCCEEEEEee
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFT-RDPDANALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~~g~~~~y~-~DPDGn~iEl~e~  170 (172)
                      .+..|+++.|.|+++..+...+ .|.++.....+....++ .+..+..|++.+.
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~   80 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEE   80 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEecc
Confidence            4578999999999999999866 79988754222223333 3445778888764

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=86.51  E-value=1.4  Score=29.82  Aligned_cols=50  Identities=14%  Similarity=0.136  Sum_probs=34.8

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEEe
Q 030725          120 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +..|+++.|.|+++..+...+.|.++.........+.+.-++|..|++.+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~   53 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRKLGVEIPAEADSAPHTEAVLDGGIRLAWDT   53 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTTCCCCGGGGGCSEEEEECTTSCEEEEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHHcCCcEEecCCCCceEEEEcCCCeEEEEec
Confidence            35799999999999998887788877643211123344445777888765

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=85.09  E-value=2.4  Score=28.47  Aligned_cols=49  Identities=6%  Similarity=-0.028  Sum_probs=35.0

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCC-C---ceEEEEECCCCCEEEEEee
Q 030725          120 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKS-G---RPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~~-g---~~~~y~~DPDGn~iEl~e~  170 (172)
                      +..|+++.|+|+++..+...+ .|.++..... +   ...+++ . +|..|+|.+.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~-~-~~~~l~l~~~   58 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVL-P-GGLSIVLREH   58 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEEC-T-TSCEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEE-c-CCCEEEEEeC
Confidence            357999999999999988866 7998864321 1   223344 4 7888998875

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=84.80  E-value=4.1  Score=27.63  Aligned_cols=51  Identities=20%  Similarity=0.204  Sum_probs=37.5

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEec---C-CCceEEEEECCC---CCEEEEEee
Q 030725          120 RDRHTCIAIRDVSKLKMILDK-AGISYTLS---K-SGRPAIFTRDPD---ANALEFTQV  170 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~---~-~g~~~~y~~DPD---Gn~iEl~e~  170 (172)
                      +..|+++.|.|+++..+...+ .|.++...   . .+....++.-++   +..|+|.+.
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~   66 (144)
T 2c21_A            8 RMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN   66 (144)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEE
T ss_pred             eeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEec
Confidence            568999999999999998876 79988632   1 223345666554   588999875

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=84.57  E-value=3.5  Score=28.23  Aligned_cols=47  Identities=19%  Similarity=0.186  Sum_probs=33.3

Q ss_pred             CcceEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCEEEEEe
Q 030725          120 RDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +..|+++.|.|+++..+...+ .|.++.....+  ..++. -+|..+++.+
T Consensus        23 ~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~~--~~~l~-~~~~~l~l~~   70 (152)
T 3huh_A           23 RIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQN--RKALI-FGAQKINLHQ   70 (152)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEETTT--EEEEE-ETTEEEEEEE
T ss_pred             eeeEEEEEeCCHHHHHHHHHhcCCCEEEEccCC--eEEEE-eCCeEEEEec
Confidence            568999999999999999988 89988754322  22232 2345666655

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=84.49  E-value=4.2  Score=28.88  Aligned_cols=44  Identities=14%  Similarity=0.027  Sum_probs=32.7

Q ss_pred             CCcceEEEEECCHHHHHHHHH-HCCCeEEec----CCCceEEEEECCCC
Q 030725          119 GRDRHTCIAIRDVSKLKMILD-KAGISYTLS----KSGRPAIFTRDPDA  162 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~-~~Gv~i~~~----~~g~~~~y~~DPDG  162 (172)
                      -..+|+++.|.|+++..+... -.|.++...    ..+...+|+..+++
T Consensus        33 ~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~   81 (187)
T 3vw9_A           33 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDK   81 (187)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCG
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCc
Confidence            467899999999999999885 479887632    23445567777664

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=82.89  E-value=4.2  Score=26.68  Aligned_cols=48  Identities=15%  Similarity=0.210  Sum_probs=33.0

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCEEEEEe
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      .+..|+++.|+|+++..+...+ .|.++.....+  .+++.- +|..+++.+
T Consensus         9 ~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~~-~~~~~~l~~   57 (133)
T 3ey7_A            9 SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAG--RIALEF-GHQKINLHQ   57 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEETTT--EEEEEE-TTEEEEEEE
T ss_pred             cccCEEEEEECCHHHHHHHHHHccCceEEEecCC--eEEEEc-CCEEEEEEc
Confidence            3578999999999999998887 79988754322  222222 355666654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=82.03  E-value=6.1  Score=28.03  Aligned_cols=52  Identities=19%  Similarity=0.153  Sum_probs=37.5

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEec---CC-CceEEEEECCC------------------CCEEEEEee
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS---KS-GRPAIFTRDPD------------------ANALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~---~~-g~~~~y~~DPD------------------Gn~iEl~e~  170 (172)
                      .+..|+++.|.|+++..+...+ .|.++...   .. +...+++..++                  |..|||.+.
T Consensus        30 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~  104 (184)
T 2za0_A           30 FLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHN  104 (184)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEE
T ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEec
Confidence            3578999999999999998877 79987632   12 23345566553                  578998764

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=81.76  E-value=5.1  Score=26.23  Aligned_cols=51  Identities=12%  Similarity=0.098  Sum_probs=35.8

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEec---CCCceEEEEECCCC-CEEEEEe
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS---KSGRPAIFTRDPDA-NALEFTQ  169 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~---~~g~~~~y~~DPDG-n~iEl~e  169 (172)
                      .+..|+++.|.|+++..+...+ .|.++...   ..+...+.+..++| ..+++.+
T Consensus        12 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~   67 (133)
T 4hc5_A           12 AYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGL   67 (133)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEEC
T ss_pred             cceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEec
Confidence            3578999999999999998865 79988643   23444555555544 4577765

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=80.93  E-value=5.3  Score=26.60  Aligned_cols=49  Identities=2%  Similarity=-0.114  Sum_probs=33.5

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCEEEEEe
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      .+..|+++.|.|+++..+...+ .|.++.....  ..+.+...+|..++|.+
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~l~l~~   61 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP--RYVAFPSSGDALFAIWS   61 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS--SEEEEECSTTCEEEEES
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC--CEEEEEcCCCcEEEEEe
Confidence            4578999999999999888776 6876643322  23344555667777764

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=80.69  E-value=2.5  Score=28.43  Aligned_cols=50  Identities=8%  Similarity=0.045  Sum_probs=33.1

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCEEEEEe
Q 030725          120 RDRHTCIAIRDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~-~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      ...|+++.|.|+++..+...+.|.++... ......+++.-.+|..++|..
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~   56 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRIIGFQFTASKVDKGSEVHRAVHNGVEFSLYS   56 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHTCCCEEC-----CCEEEEEETTEEEEEEE
T ss_pred             eEEEEEEEcCCHHHHHHHHHHCCCEEecccCCCCCEEEEEeCCCeEEEEEE
Confidence            46899999999999988777788887654 221123444434666777754

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=80.12  E-value=6.8  Score=26.80  Aligned_cols=49  Identities=18%  Similarity=0.153  Sum_probs=34.7

Q ss_pred             CCcceEEEEECCHHHHHHHH----HHCCCeEEecCCCceEEEEECCCCCEEEEEee
Q 030725          119 GRDRHTCIAIRDVSKLKMIL----DKAGISYTLSKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L----~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .+..|+++.|.|+++..+..    +..|.++.....+. ..|+.  +|..|+|.+.
T Consensus        19 ~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~~-~~~~~--g~~~l~l~~~   71 (146)
T 3ct8_A           19 GMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSRG-KSYKH--GKTYLVFVQT   71 (146)
T ss_dssp             TSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETTE-EEEEE--TTEEEEEEEC
T ss_pred             cceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCCC-ceEec--CCeEEEEEEc
Confidence            35789999999999998877    45899886442222 23555  5677888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	172
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	2e-04
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-04
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	0.004

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 37.7 bits (86), Expect = 2e-04
 Identities = 15/109 (13%), Positives = 32/109 (29%), Gaps = 7/109 (6%)

Query: 71  DKIGLEINEARPHDKLPYRGAWLWV---GAEMIHLMELPNPDPLSGRPEHGGRDR--HTC 125
           + +GL   +   +   P      +    G+    L     P             R     
Sbjct: 26  NVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLLV 85

Query: 126 IAIRDVSKLKMILDKAGISYT--LSKSGRPAIFTRDPDANALEFTQVDG 172
            +   +   K   +K  + ++   + + RPA+   D +   L     +G
Sbjct: 86  PSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG 134

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 37.3 bits (85), Expect = 2e-04
 Identities = 18/99 (18%), Positives = 34/99 (34%)

Query: 71  DKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD 130
           +++G+++       +  Y   +L  G EM   +     +      +H     H  I + D
Sbjct: 23  ERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVED 82

Query: 131 VSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQ 169
           V +L   + K  +            F  DPD   +E   
Sbjct: 83  VKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLN 121

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 33.9 bits (76), Expect = 0.004
 Identities = 15/105 (14%), Positives = 38/105 (36%), Gaps = 5/105 (4%)

Query: 70  SDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR 129
           +  +G+++     + +  Y  A++  G E    +     +    + E G    H  +++ 
Sbjct: 21  TKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD 80

Query: 130 DVSKLKMILDKAGISYTLSKSGRP-----AIFTRDPDANALEFTQ 169
           + ++    + + G + T              F  DPD   +E  +
Sbjct: 81  NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	172
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.85
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.82
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.82
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.8
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.8
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.79
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.78
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.78
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.78
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.78
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.77
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.76
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.76
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.76
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.75
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.74
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.73
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.73
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.73
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.73
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.68
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.67
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.67
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.62
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.62
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.61
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.6
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.59
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.54
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.47
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.24
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.14
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.91
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.79
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.68
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.5
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.41
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.31
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.25
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.93
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	92.34
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	91.01
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	89.91
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	87.96
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	86.68
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	82.69

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.85  E-value=7.3e-21  Score=132.43  Aligned_cols=106  Identities=14%  Similarity=0.108  Sum_probs=84.2

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  133 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~  133 (172)
                      |+.|.|+|+++|++||+++||+++....+      ..+++..|+..+.|.......    . ...+...|++|.|+|+++
T Consensus         5 ~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~~l~l~~~~~~~----~-~~~~~~~~~~f~v~D~d~   73 (115)
T d2i7ra1           5 QLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSHCLMLSQNHLVP----L-ENFQSGIIIHIEVEDVDQ   73 (115)
T ss_dssp             EEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTEEEEEESSCSSS----C-CCCCSCEEEEEECSCHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCceeeeeecccCC----C-CCCCcceEEEEEECCHHH
Confidence            68899999999999999999999865322      235688888888876543211    1 112334689999999999


Q ss_pred             HHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          134 LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       134 ~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++++|+++|+++..+    ++|.+.+||+|||||.|||+|+
T Consensus        74 ~~~~l~~~G~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          74 NYKRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             HHHHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHhhccccccceEEeeCCeEEEEEECCCCCEEEEEEe
Confidence            999999999988632    6788899999999999999986

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.82  E-value=2.1e-20  Score=133.54  Aligned_cols=115  Identities=11%  Similarity=0.094  Sum_probs=82.2

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeE--EEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~--l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ...++++|+|+++|++||+++|||++..... ....+..+|+..++..  +.+...+...    .+...+..+|++|.|+
T Consensus        10 ~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~hlaf~v~   84 (137)
T d1twua_          10 QIRIARPTGQLDEIIRFYEEGLCLKRIGEFS-QHNGYDGVMFGLPHADYHLEFTQYEGGS----TAPVPHPDSLLVFYVP   84 (137)
T ss_dssp             CEEEEEECSCHHHHHHHHTTTSCCCEEEEEE-EETTEEEEEEESSSSSEEEEEEEETTCC----CCCCCCTTCEEEEECC
T ss_pred             EEEEecccCCHHHHHHHHHhccCCceeeeec-cccceeEEEecCCCCceeeecccccccc----cccccccCceEEEEeC
Confidence            3457889999999999999999999875322 1234455666655443  3333333211    1122345689999987


Q ss_pred             C---HHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEeec
Q 030725          130 D---VSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       130 d---ld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      |   +++++++|+++|+++..+   .++.+.+||+|||||+|||....
T Consensus        85 ~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~  132 (137)
T d1twua_          85 NAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  132 (137)
T ss_dssp             CHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             CHHHHHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCC
Confidence            6   778889999999998753   36778899999999999998764

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.82  E-value=2.5e-19  Score=128.23  Aligned_cols=123  Identities=14%  Similarity=0.128  Sum_probs=85.4

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCC-----------CCCcceEEEEeC--CeEEEEEecCCCCCCC---
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHD-----------KLPYRGAWLWVG--AEMIHLMELPNPDPLS---  112 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~~~~g--~~~l~L~~~~~~~~~~---  112 (172)
                      +.-..|++|.|+|+++|.+||++ |||+...+.+..           ......+++...  ...++|++........   
T Consensus         7 ~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~   85 (149)
T d1ss4a_           7 LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIADHR   85 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCBCT
T ss_pred             CCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccccc
Confidence            44456899999999999999998 999987532210           111123344443  3356666543221111   


Q ss_pred             CCCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeecC
Q 030725          113 GRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  172 (172)
Q Consensus       113 ~~p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~~  172 (172)
                      ..+....+..|+||.|+|+++++++|+++|+++..+    .++.+.+|++|||||.|||+|..+
T Consensus        86 ~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~~~  149 (149)
T d1ss4a_          86 TAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEELG  149 (149)
T ss_dssp             TCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEECC
T ss_pred             ccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEccC
Confidence            112223356899999999999999999999998632    467788999999999999999764

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.80  E-value=7.1e-19  Score=123.72  Aligned_cols=111  Identities=14%  Similarity=0.104  Sum_probs=82.7

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCC-CCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC-
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHD-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR-  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~-  129 (172)
                      ..|+++.|+|++++++||+++|||++....+.. .....+.++..++..+++......        ......|++|.|+ 
T Consensus         5 i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~f~v~~   76 (130)
T d1r9ca_           5 LSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEKL--------AERSYNHIAFKIDD   76 (130)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCCC--------SSCCSCEEEEECCG
T ss_pred             EeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeecccccc--------cccceeeeeecccH
Confidence            458999999999999999999999997643321 123345677777777776554311        1123579999875 


Q ss_pred             -CHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          130 -DVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       130 -dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                       |+++++++|+++|+++...    .++.+++||+|||||+|||.+.
T Consensus        77 ~dv~~~~~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          77 ADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             GGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECC
T ss_pred             HHHHHHHHHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEEC
Confidence             7999999999999998633    4567889999999999999864

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.80  E-value=4.3e-19  Score=127.09  Aligned_cols=118  Identities=12%  Similarity=0.119  Sum_probs=81.3

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEE-EEeC--C----eEEEEEecCCCCCCCCCCCCCCCc
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAW-LWVG--A----EMIHLMELPNPDPLSGRPEHGGRD  121 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~-~~~g--~----~~l~L~~~~~~~~~~~~p~~~g~~  121 (172)
                      ++-..|+++.|+|+++|++||+++|||++..+.+.  ......+ +..+  .    ..+.+...+...+  ..+. .++.
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~-~~~~   78 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVN--QDDPSMYHLFYGDKTGSPGTELSFFEIPLVGR--TYRG-TNAI   78 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEE--TTEEEEEEEEEESTTCCTTSEEEEEECTTCCB--CBCC-BSEE
T ss_pred             ccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeecc--ccCCceeEEEecccccceeeEEeecccccccC--CccC-CCce
Confidence            34456899999999999999999999998764321  2222221 2222  1    2344433332211  1111 2346


Q ss_pred             ceEEEEECC---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEeec
Q 030725          122 RHTCIAIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       122 ~Hi~f~V~d---ld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      +|+||.|+|   ++++.++|+++|+.+...  .++.+++||+|||||.|||++.+
T Consensus        79 ~Hiaf~v~~~~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~  133 (144)
T d1zswa1          79 TRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSN  133 (144)
T ss_dssp             EEEEEEESCHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECT
T ss_pred             eEEEEecCCchhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeC
Confidence            899999998   677889999999988643  57788999999999999999864

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.79  E-value=2.7e-18  Score=122.43  Aligned_cols=111  Identities=21%  Similarity=0.254  Sum_probs=83.3

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE--
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--  128 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V--  128 (172)
                      -..|+++.|+|++++++||+++|||++.....      ...++..++..+.+........   .+...+...|++|.+  
T Consensus         4 ~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~h~~~~~~~   74 (140)
T d1npba_           4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQY---VPPQESDYTHYAFTVAE   74 (140)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTEEEEEEECTTCCC---CCGGGSCSCEEEEECCH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccccceeeccccccc---CCCcCCccceeeeechH
Confidence            34689999999999999999999999975321      2345677776666543322211   112234467999988  


Q ss_pred             CCHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCEEEEEee
Q 030725          129 RDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~-~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +|+++++++|+++|+++... .++.+++||+|||||.|||.+.
T Consensus        75 ~d~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          75 EDFEPLSQRLEQAGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             HHHHHHHHHHHHTTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHHHHHHHHCCCeEeecCCCCceEEEEECCCCCEEEEEEC
Confidence            57999999999999998754 5677899999999999999764

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.78  E-value=1.1e-18  Score=118.93  Aligned_cols=103  Identities=13%  Similarity=0.115  Sum_probs=73.7

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  133 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~  133 (172)
                      ...|.++|+++|++||+++|||++....+      ....+..++....++......      ..+....|++|.++|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLEAHAQVSFAREG------GSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEEEEEEEEEESSS------BTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc------ceeEeccccccceeeeccccc------CCCCceeEEEEEecCHHH
Confidence            35688999999999999999999976322      122233333333322221111      112234689999999999


Q ss_pred             HHHHHHHCCCeEEe----cCCCceEEEEECCCCCEEEEE
Q 030725          134 LKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       134 ~~~~L~~~Gv~i~~----~~~g~~~~y~~DPDGn~iEl~  168 (172)
                      ++++|+++|+++..    ..+|.+.+|++|||||.||++
T Consensus        73 ~~~~l~~~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             HHHHHHhhccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            99999999998752    267889999999999999985

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.78  E-value=6.1e-19  Score=125.26  Aligned_cols=104  Identities=15%  Similarity=0.096  Sum_probs=79.8

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      ++-..|+.|.|+|++++++||+++|||++..+.+      ...|+..++.  .+.+.+.+           ..+..|++|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l~~~~-----------~~~~~h~~f   64 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAVQQGE-----------VDDLAFAGY   64 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT-----------TCEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEEecCC-----------CCCceEEEE
Confidence            3445699999999999999999999999976322      3567877654  24443221           135689999


Q ss_pred             EEC---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEe
Q 030725          127 AIR---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       127 ~V~---dld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      .|.   |++++.++|+++|+++...       .++.+.+||+|||||.||++.
T Consensus        65 ~v~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          65 EVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             EEccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence            996   4677899999999999743       356678999999999999974

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.78  E-value=3.3e-18  Score=121.11  Aligned_cols=108  Identities=19%  Similarity=0.224  Sum_probs=82.3

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEE--
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAI--  128 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V--  128 (172)
                      -..|++|.|+|++++++||+++||+++..+.+      ...++..++..++.........      ......|++|.+  
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~h~~~~~~~   71 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYGG------PAADYTHYAFGIAA   71 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTEEEEEEECTTCCC------CCSSSCEEEEEECH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCeEEEEeeeccccc------cccccccchhcccc
Confidence            35689999999999999999999999876432      3457788877776654432211      122346777766  


Q ss_pred             CCHHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCEEEEEee
Q 030725          129 RDVSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~-~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +|+++++++|+++|+++... .++.+.+||+|||||.|||+..
T Consensus        72 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          72 ADFARFAAQLRAHGVREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHHHHTTCCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             chHHHHHHHHHHCCCcCccCCCcceeEEEEECCCCCEEEEEEC
Confidence            58999999999999998754 4567889999999999999763

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=9.1e-19  Score=122.32  Aligned_cols=115  Identities=17%  Similarity=0.198  Sum_probs=76.8

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe----EEEEEecCCCCCCCCCCCCCCCcceEEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE----MIHLMELPNPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~----~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      .|++|.|+|+++|++||+++|||++....+.........+...+..    ..........   . .+.......|+++.+
T Consensus         4 ~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~   79 (135)
T d1f9za_           4 LHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGV---D-KYELGTAYGHIALSV   79 (135)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTC---C-CCCCCSSEEEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeecccccccccccc---c-cccccccceeeccch
Confidence            3899999999999999999999998753321111211222222111    1111111111   0 112234568999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEeec
Q 030725          129 RDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ++++++.++++++|..+...     .++.+.+||+|||||.|||+|.+
T Consensus        80 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~  127 (135)
T d1f9za_          80 DNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEK  127 (135)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-
T ss_pred             HHHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECC
Confidence            99999999999999988632     35677899999999999999964

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.77  E-value=4.9e-18  Score=117.99  Aligned_cols=106  Identities=20%  Similarity=0.215  Sum_probs=81.3

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      ++...|+++|+++|++||++ |||++....+      ...++..++..+++.......+       .....|+++.++|+
T Consensus         3 ~~~p~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~   68 (120)
T d1ecsa_           3 QATPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEFFAHPGLDP-------LASWFSCCLRLDDL   68 (120)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETTEEEEEEECTTCCG-------GGCCCEEEEEESCH
T ss_pred             eEEEEEEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeecceecccccccccccc-------CCCCcEEEEEECCH
Confidence            45667899999999999987 9999976321      2345666777777765542211       12246899999999


Q ss_pred             HHHHHHHHHCCCeEE-----------ecCCCceEEEEECCCCCEEEEEeec
Q 030725          132 SKLKMILDKAGISYT-----------LSKSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       132 d~~~~~L~~~Gv~i~-----------~~~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ++++++++++|+.+.           ...+|.+.+||+|||||.|||.|.+
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          69 AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEcc
Confidence            999999999988763           1257889999999999999999975

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.76  E-value=1.1e-18  Score=129.35  Aligned_cols=112  Identities=13%  Similarity=0.159  Sum_probs=77.5

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe---EEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE---MIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~---~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      +-..|++|.|+|++++++||+++|||++..+.+    + ...|...++.   .+.+.....+   ...+. .++.+|+||
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~l~HiAf   81 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----Q-EAIFQSIKGEAFGEIVVKYLDGP---TEKPG-RGSIHHLAI   81 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----S-EEEEESSTTCSTTCEEEEECCSS---BCBCC-BTCEEEEEE
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----c-eEEEEeccCccceEEEecccccc---ccccC-ccccceEEE
Confidence            335789999999999999999999999986322    1 1222222221   1222221111   11222 235689999


Q ss_pred             EECC---HHHHHHHHHHCCCeEEec--CCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRD---VSKLKMILDKAGISYTLS--KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~d---ld~~~~~L~~~Gv~i~~~--~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .|+|   ++++.++|++.|+++...  ..+.+++||+|||||.|||+..
T Consensus        82 ~V~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          82 RVKNDAELAYWEEQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             EeCChHHHHHHHHHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEEC
Confidence            9986   677889999999998643  4667899999999999999864

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.76  E-value=1.7e-18  Score=121.15  Aligned_cols=114  Identities=15%  Similarity=0.185  Sum_probs=79.6

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEe--CCe---EEEEEecCCCCCCCCCCCCCCCcceEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWV--GAE---MIHLMELPNPDPLSGRPEHGGRDRHTCI  126 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~--g~~---~l~L~~~~~~~~~~~~p~~~g~~~Hi~f  126 (172)
                      .+|+.|.|+|+++|++||+++|||++......  ......+...  ...   ...........   ..........|+++
T Consensus         4 ~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   78 (139)
T d2c21a1           4 MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDV--PEDKYTLVFLGYGPEMSSTVLELTYNYGV---TSYKHDEAYGHIAI   78 (139)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCEEEEEEEE--GGGTEEEEEEESSCTTTSCEEEEEEETTC---CCCCCCSSEEEEEE
T ss_pred             eEEEEEEeCCHHHHHHHHHHHhCCEeeccccc--cccceeeeeecccccccccccccccccCc---ccccCCCccceeee
Confidence            46899999999999999999999999763221  1122233322  111   11111111111   11112234578999


Q ss_pred             EECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEEee
Q 030725          127 AIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       127 ~V~dld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .+++++++++++...++++....+|.+.+||+|||||.|||++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~  122 (139)
T d2c21a1          79 GVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNE  122 (139)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEH
T ss_pred             ehhhHHHHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEEC
Confidence            99999999999999999998888888999999999999999984

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.76  E-value=2.4e-18  Score=117.91  Aligned_cols=102  Identities=12%  Similarity=0.099  Sum_probs=74.2

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC--CeEEEEEecCCCCCCCCCCCCCCCcceEEEEECC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG--AEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRD  130 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g--~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~d  130 (172)
                      .|+.+.|.|++++++||+++|||++.....      ...++..+  +..+.++..+..       . .++..|++|.|+|
T Consensus         5 ~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~h~~f~v~~   70 (113)
T d1xqaa_           5 KHLNLTVADVVAAREFLEKYFGLTCSGTRG------NAFAVMRDNDGFILTLMKGKEV-------Q-YPKTFHVGFPQES   70 (113)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEET------TTEEEEECTTCCEEEEEECSSC-------C-CCTTCCEEEECSS
T ss_pred             cEEEEEeCCHHHHHHHHHHhhCCEEEEeec------Ccceeeeecceeeeeeeeeecc-------c-ccccceeeeeecc
Confidence            378999999999999999999999975322      12233333  235666544321       1 2345799999987


Q ss_pred             ---HHHHHHHHHHCCCeEEec-CCCceEEEEECCCCCEEEEE
Q 030725          131 ---VSKLKMILDKAGISYTLS-KSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       131 ---ld~~~~~L~~~Gv~i~~~-~~g~~~~y~~DPDGn~iEl~  168 (172)
                         ++++.++|+++|+++... ..+.+++||+|||||.|||.
T Consensus        71 ~~~v~~~~~~l~~~G~~~~~~~~~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          71 EEQVDKINQRLKEDGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             ccchhhhhhhHHHcCCccccCCCCceEEEEEECCCCCEEEEE
Confidence               667889999999998644 35567899999999999985

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.1e-17  Score=123.46  Aligned_cols=119  Identities=13%  Similarity=0.101  Sum_probs=77.7

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCC-------------------eEEEEEecCCC-----
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGA-------------------EMIHLMELPNP-----  108 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~-------------------~~l~L~~~~~~-----  108 (172)
                      .|++|.|+|+++|++||+++|||++..............|...+.                   ....+......     
T Consensus        25 ~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (176)
T d1qipa_          25 QQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDET  104 (176)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGCTT
T ss_pred             eEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccccccC
Confidence            568999999999999999999999865322111222223332211                   11122221111     


Q ss_pred             CCCCCCCCCCCCcceEEEEECCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEeec
Q 030725          109 DPLSGRPEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       109 ~~~~~~p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      ...........+..|+||.++|++++.++|+++|+++...   ..+...+||+|||||.|||+|++
T Consensus       105 ~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~  170 (176)
T d1qipa_         105 QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPN  170 (176)
T ss_dssp             CCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTT
T ss_pred             cCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCC
Confidence            0000111112356899999999999999999999999854   23455689999999999999974

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.74  E-value=1.2e-17  Score=122.55  Aligned_cols=111  Identities=14%  Similarity=0.127  Sum_probs=75.5

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      ..|++|.|+|+++|++||+++|||++....+.........|+..+...........       +. .++.+|++|.+.++
T Consensus         6 ldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~h~~~~~~~~   77 (162)
T d1mpya2           6 FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHH-------PE-KGRLHHVSFHLETW   77 (162)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEEC-------SS-SSEEEEEEEECSCH
T ss_pred             ccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccccccccc-------CC-CCccceeEEEEeee
Confidence            45899999999999999999999998764332222222233443332111111111       11 23468999999876


Q ss_pred             H---HHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          132 S---KLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       132 d---~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +   +++++|+++|+++...     .++..++||+|||||.|||+..
T Consensus        78 ~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~  124 (162)
T d1mpya2          78 EDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCG  124 (162)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEEC
T ss_pred             hhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEEC
Confidence            5   6789999999988632     2446789999999999999863

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.73  E-value=7.4e-18  Score=118.34  Aligned_cols=112  Identities=19%  Similarity=0.138  Sum_probs=75.9

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeC-CeEEEEEecC---CCCCCCCCCCCCCCcceEEEEE
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVG-AEMIHLMELP---NPDPLSGRPEHGGRDRHTCIAI  128 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g-~~~l~L~~~~---~~~~~~~~p~~~g~~~Hi~f~V  128 (172)
                      .|++|.|+|+++|++||++ ||+........    ....++..+ +..+.+....   ...+... +...++..|++|.|
T Consensus         4 ~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~v   77 (128)
T d1klla_           4 SLFAVVVEDMAKSMEFYRK-MGVEIPAEADS----APHTEAVLDGGIRLAWDTVETVRSYDPEWQ-APTGGHRFAIAFEF   77 (128)
T ss_dssp             CEEEEEESCHHHHHHHHHH-TTCCCCTTGGG----CSEEEEECGGGCEEEEEEHHHHHHHCTTCC-CCCSSCSCEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHHHH-hCCcccccccc----ccceeeeccceeeeeecccccccccCCCCC-CCccccceeEeeee
Confidence            4788999999999999976 89987653321    122333333 2344443211   0011111 12234457999999


Q ss_pred             CC---HHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          129 RD---VSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~d---ld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ++   +++++++|+++|+++..+    .+|.+.+||+|||||.|||+++
T Consensus        78 ~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          78 PDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             SSHHHHHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEE
T ss_pred             ccchhhHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEec
Confidence            87   667899999999998632    5788899999999999999986

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.73  E-value=5.1e-18  Score=120.64  Aligned_cols=101  Identities=12%  Similarity=0.048  Sum_probs=77.7

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeE--EEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEM--IHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~--l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      -.|+.|.|+|++++++||+++|||++.....      ..+|+..++..  +.+...+           ..+..|++|.|+
T Consensus         5 L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~~~~~-----------~~~~~h~~f~v~   67 (132)
T d1kw3b1           5 LGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQPGE-----------LDDLAYAGLEVD   67 (132)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEEECT-----------TCEEEEEEEECS
T ss_pred             ccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeeeeccC-----------CCCceEEEEEec
Confidence            4689999999999999999999999875321      35788877543  3332211           134689999996


Q ss_pred             ---CHHHHHHHHHHCCCeEEec-------CCCceEEEEECCCCCEEEEEe
Q 030725          130 ---DVSKLKMILDKAGISYTLS-------KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       130 ---dld~~~~~L~~~Gv~i~~~-------~~g~~~~y~~DPDGn~iEl~e  169 (172)
                         |++++.++|+++|+++...       ..+...+||+|||||.|||+.
T Consensus        68 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~  117 (132)
T d1kw3b1          68 DAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYY  117 (132)
T ss_dssp             SHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             cHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEE
Confidence               4778899999999998743       244578999999999999974

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.73  E-value=1.5e-17  Score=115.23  Aligned_cols=102  Identities=16%  Similarity=0.084  Sum_probs=79.3

Q ss_pred             eeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHHH
Q 030725           55 MSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKL  134 (172)
Q Consensus        55 ~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~~  134 (172)
                      ..+.++|+++|++||+++|||++....+      ..+++..++..+++.......        .....|+++.++|++++
T Consensus         9 pvL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~~l~l~~~~~~~--------~~~~~~~~~~~~~i~~~   74 (122)
T d1jifa_           9 PVLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDIRLHISRTEHQI--------VADNTSAWIEVTDPDAL   74 (122)
T ss_dssp             EEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCHH--------HHTTCEEEEEESCHHHH
T ss_pred             EEEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeeeeeeeecccccc--------ccceeEEEEeechhHHH
Confidence            3578999999999999999999876322      346778888888887654211        11236899999999999


Q ss_pred             HHHHHHCCCeEEe-----------cCCCceEEEEECCCCCEEEEEee
Q 030725          135 KMILDKAGISYTL-----------SKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       135 ~~~L~~~Gv~i~~-----------~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .++++++++....           ..+|.+.+||+|||||+|||..-
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          75 HEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEeC
Confidence            9999999876531           13567899999999999999864

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.73  E-value=6.3e-18  Score=119.98  Aligned_cols=121  Identities=10%  Similarity=0.091  Sum_probs=82.7

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEE------EeCCeEEEEEecCCCCCCC----CCCCCCCC
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWL------WVGAEMIHLMELPNPDPLS----GRPEHGGR  120 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~------~~g~~~l~L~~~~~~~~~~----~~p~~~g~  120 (172)
                      -..|++|.|+|+++|++||+++||++...............+.      ..+...+++++...+....    .......+
T Consensus         7 ~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~g   86 (145)
T d1jc4a_           7 CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAG   86 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCCE
T ss_pred             EEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCCc
Confidence            3458999999999999999999999986532211112111221      1244577777654322111    01122345


Q ss_pred             cceEEEEECCHHHHHHHHHHCCCeEEec-----CCCceEEEE--ECCCCCEEEEEeec
Q 030725          121 DRHTCIAIRDVSKLKMILDKAGISYTLS-----KSGRPAIFT--RDPDANALEFTQVD  171 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~--~DPDGn~iEl~e~~  171 (172)
                      .+|+||.|+|+++++++|+++|+++...     ..|.+.+|+  +||||++|||+|.+
T Consensus        87 ~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          87 LHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             EEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             ceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            7999999999999999999999998522     355555666  79999999999964

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.68  E-value=4.3e-16  Score=111.98  Aligned_cols=108  Identities=18%  Similarity=0.114  Sum_probs=75.7

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe-EEEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE-MIHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~-~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      +.-..|+.+.|+|++++++||+++|||+.....+      ...++...+. ..+++....        ....+.+|++|.
T Consensus        14 i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~h~~~~   79 (146)
T d1f1ua1          14 IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQ--------GPIAAVAAFAYR   79 (146)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEE--------CSSCEEEEEEEE
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC------Cceeeecccccccceeeccc--------cCCCCCceeeEe
Confidence            3445689999999999999999999999986321      2334443222 111111110        011346899999


Q ss_pred             EC---CHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          128 IR---DVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V~---dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +.   |++++.++|+++|+++...     .++.+++||+|||||.|||+..
T Consensus        80 ~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~  130 (146)
T d1f1ua1          80 VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYE  130 (146)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECC
T ss_pred             eccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEe
Confidence            96   5788999999999998632     2335789999999999999863

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=1.1e-15  Score=108.11  Aligned_cols=123  Identities=12%  Similarity=-0.028  Sum_probs=85.0

Q ss_pred             CceeeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCC-------CCcceEEEEeCCeEEEEEecCCCCCCCCCCCCC
Q 030725           46 GQFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDK-------LPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHG  118 (172)
Q Consensus        46 ~~~l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~-------~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~  118 (172)
                      +.+-.++-++.|.+.|+++|++||+++||+++........       .....+-+.+++..+.+........... +...
T Consensus         2 ~~~~~~~P~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~-~~~~   80 (135)
T d1xy7a_           2 LVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFST-AKSE   80 (135)
T ss_dssp             CCEEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCC-CCTT
T ss_pred             cceeeEccEEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeecccccccccccc-CCCC
Confidence            3455667788999999999999999999999865322100       0111234566776666554321111111 1222


Q ss_pred             CCcceEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEe
Q 030725          119 GRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +...++++.++|++++++++.++|+++..+    .||.+.++|+||+||.|+|.|
T Consensus        81 ~~~~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          81 GSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             SCCCEEEEECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             CcceEEEEeecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            334699999999999999999999998744    578899999999999999976

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.67  E-value=7.6e-16  Score=105.78  Aligned_cols=102  Identities=10%  Similarity=0.034  Sum_probs=75.5

Q ss_pred             eeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 030725           54 KMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  133 (172)
Q Consensus        54 ~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~  133 (172)
                      ...+.|+|+++|++||+++|||++..+.+      ...++..++..+++.......        .....++.+.+++++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQV--------VPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETTEEEEEEECSCTT--------TGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEecccceeecccccccc--------CCCCceEEEeeccHHH
Confidence            34578999999999999999999976322      245677888888886554221        1234688999999999


Q ss_pred             HHHHHHHCCCeEE--------ec---CCCceEEEEECCCCCEEEEEe
Q 030725          134 LKMILDKAGISYT--------LS---KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       134 ~~~~L~~~Gv~i~--------~~---~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +.+.+.+++....        ..   .++.+.+||+|||||.|||+.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence            9888887655432        11   234478999999999999985

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.62  E-value=7.7e-16  Score=114.45  Aligned_cols=106  Identities=15%  Similarity=0.143  Sum_probs=72.6

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe--EEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE--MIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~--~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      ..|+++.|+|++++++|| ++|||++.............+|+..++.  .+.+...+           .++.+|++|.+.
T Consensus         6 l~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~~H~~f~~~   73 (176)
T d1f1ua2           6 LDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGN-----------GPRMHHVAFATH   73 (176)
T ss_dssp             EEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESS-----------BSEEEEEEEECS
T ss_pred             eeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceeccccc-----------CCCccceeEEec
Confidence            468999999999999999 6899998754332222233445554433  23332221           235689999998


Q ss_pred             CHH---HHHHHHHHCCCeEE----ec---CCCceEEEEECCCCCEEEEEe
Q 030725          130 DVS---KLKMILDKAGISYT----LS---KSGRPAIFTRDPDANALEFTQ  169 (172)
Q Consensus       130 dld---~~~~~L~~~Gv~i~----~~---~~g~~~~y~~DPDGn~iEl~e  169 (172)
                      +++   ++.++|+++|+.+.    +.   .++..++||+|||||.|||+.
T Consensus        74 ~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~  123 (176)
T d1f1ua2          74 EKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYT  123 (176)
T ss_dssp             SHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEE
T ss_pred             cchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEe
Confidence            655   55678999998542    11   244568999999999999976

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.62  E-value=9.1e-16  Score=111.95  Aligned_cols=109  Identities=13%  Similarity=0.077  Sum_probs=71.3

Q ss_pred             EeeeeecCChHHHHHHhHhccCCEEeeecCC---CCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEEC
Q 030725           53 AKMSVEGGILKKEPIRDSDKIGLEINEARPH---DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIR  129 (172)
Q Consensus        53 a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~---~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~  129 (172)
                      .|+++.|+|++++++||+++|||++......   ........|+..+.....+...+.       |. ..+.+|+||+|+
T Consensus        12 gHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~-------~~-~~gl~Hiaf~v~   83 (156)
T d1kw3b2          12 GHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAF-------PI-PKRIHHFMLQAN   83 (156)
T ss_dssp             CEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECC-------SC-SSSEEEEEEEBS
T ss_pred             ceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccC-------CC-CCceeEEEEECC
Confidence            3788999999999999999999998642110   001112234444433222211111       11 235799999998


Q ss_pred             CHH---HHHHHHHHCCCeEEec----CCCceEEEEECCCCC-EEEEEe
Q 030725          130 DVS---KLKMILDKAGISYTLS----KSGRPAIFTRDPDAN-ALEFTQ  169 (172)
Q Consensus       130 dld---~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn-~iEl~e  169 (172)
                      +++   ++.++|+++|+.+...    .....++|++||||| .+|+..
T Consensus        84 ~~ddv~~~~d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~  131 (156)
T d1kw3b2          84 TIDDVGYAFDRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGW  131 (156)
T ss_dssp             SHHHHHHHHHHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEE
T ss_pred             CHHHHHHHHHHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEec
Confidence            655   5679999999876422    244678999999999 589864

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.61  E-value=1.2e-15  Score=108.91  Aligned_cols=103  Identities=13%  Similarity=0.030  Sum_probs=70.1

Q ss_pred             EEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCe-E---EEEEecCCCCCCCCCCCCCCCcceEEEE
Q 030725           52 KAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAE-M---IHLMELPNPDPLSGRPEHGGRDRHTCIA  127 (172)
Q Consensus        52 ~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~-~---l~L~~~~~~~~~~~~p~~~g~~~Hi~f~  127 (172)
                      ..|+.+.|+|++++++||+++|||++.....    . ...+....+. .   +.+...+           .....|+++.
T Consensus         8 l~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~   71 (145)
T d1mpya1           8 PGHVQLRVLDMSKALEHYVELLGLIEMDRDD----Q-GRVYLKAWTEVDKFSLVLREAD-----------EPGMDFMGFK   71 (145)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEECT----T-SCEEEECTTCCBSCSEEEEECS-----------SCEEEEEEEE
T ss_pred             eeeEEEEeCCHHHHHHHHHHhhCCEEEEeec----c-CccceecccccceeeccccccC-----------cccceeeeee
Confidence            4589999999999999999999999875322    1 1112222221 1   1111111           1124577776


Q ss_pred             E---CCHHHHHHHHHHCCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          128 I---RDVSKLKMILDKAGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       128 V---~dld~~~~~L~~~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +   +|+++++++|+++|+++...     .+..+++||+|||||.|||++.
T Consensus        72 ~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~  122 (145)
T d1mpya1          72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYAD  122 (145)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESC
T ss_pred             ehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEe
Confidence            5   47889999999999988632     2334799999999999999863

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.3e-15  Score=107.38  Aligned_cols=125  Identities=14%  Similarity=0.097  Sum_probs=84.7

Q ss_pred             ceeeEEEeeeeecCChHHHHHHhHhccCCEEeeecCC--CCCCcceEEEEeCCeEEEEEecCCCCCCC-CC--CCCCCCc
Q 030725           47 QFLTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPH--DKLPYRGAWLWVGAEMIHLMELPNPDPLS-GR--PEHGGRD  121 (172)
Q Consensus        47 ~~l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~--~~~~~~~~~~~~g~~~l~L~~~~~~~~~~-~~--p~~~g~~  121 (172)
                      ++++ ..|+++.|.|+++|++||+++|||++......  .........+..++..+.|.......... ..  ..++.+.
T Consensus         8 ~~~~-~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1           8 RFLH-FHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             EEEE-EEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             ceee-EeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            3444 46899999999999999999999998753221  11111122344566677776543221110 00  0123457


Q ss_pred             ceEEEEECCHHHHHHHHHHCCCeEEec------CCC-ceEEEEECCCCCEEEEEeecC
Q 030725          122 RHTCIAIRDVSKLKMILDKAGISYTLS------KSG-RPAIFTRDPDANALEFTQVDG  172 (172)
Q Consensus       122 ~Hi~f~V~dld~~~~~L~~~Gv~i~~~------~~g-~~~~y~~DPDGn~iEl~e~~~  172 (172)
                      +|+||.|+|+++++++|+++|+++..+      ..| .+.++++.|+|..+||+|+.+
T Consensus        87 ~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~  144 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN  144 (149)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             EEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCC
Confidence            899999999999999999999998632      223 256788999899999999753

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.59  E-value=5.3e-15  Score=107.98  Aligned_cols=121  Identities=12%  Similarity=0.051  Sum_probs=84.4

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCC--CCcceEEEEeCCeEEEEEecCCCCCCCC-----C-CCCCCCcc
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDK--LPYRGAWLWVGAEMIHLMELPNPDPLSG-----R-PEHGGRDR  122 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~~~~~g~~~l~L~~~~~~~~~~~-----~-p~~~g~~~  122 (172)
                      -..|+.+.|.|+++|++||+++|||++........  .......+..++..+.|.+.........     . ...+.+..
T Consensus         7 ~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g~G~~   86 (163)
T d1t47a1           7 GMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGVV   86 (163)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEEE
T ss_pred             eEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcCCCceE
Confidence            35689999999999999999999999875332111  1112233455667777765432211000     0 01134578


Q ss_pred             eEEEEECCHHHHHHHHHHCCCeEEec------C-CCceEEEEECCCCCEEEEEeec
Q 030725          123 HTCIAIRDVSKLKMILDKAGISYTLS------K-SGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       123 Hi~f~V~dld~~~~~L~~~Gv~i~~~------~-~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                      |+||.|+|+++++++|+++|+++...      . +....+++++|+|..++|+|+.
T Consensus        87 hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          87 DLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             EEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             EEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            99999999999999999999998632      1 2245789999999999999864

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=4.1e-14  Score=103.47  Aligned_cols=124  Identities=14%  Similarity=0.033  Sum_probs=82.8

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEE--EEeCCeEEEEEecCCCCC---------CCCCCC-
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAW--LWVGAEMIHLMELPNPDP---------LSGRPE-  116 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~--~~~g~~~l~L~~~~~~~~---------~~~~p~-  116 (172)
                      +.-..|+.|.|.|++++.+||+++|||+...+............  +..++..+.+........         ....+. 
T Consensus        10 i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~   89 (167)
T d1sqda1          10 VKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSF   89 (167)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSSTTC
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEeccccccccccccccccccccccC
Confidence            33456899999999999999999999998764321111111112  233444443322111000         000000 


Q ss_pred             -----------CCCCcceEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeecC
Q 030725          117 -----------HGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVDG  172 (172)
Q Consensus       117 -----------~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~~  172 (172)
                                 ++.+..|+||.|+|+++++++|+++|+++..+    .++.+.++|+.+.+..++|+++.+
T Consensus        90 ~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          90 DHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             CHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECC
T ss_pred             CcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCC
Confidence                       12357899999999999999999999998733    467788899999999999999854

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.47  E-value=9.8e-13  Score=96.77  Aligned_cols=123  Identities=11%  Similarity=-0.038  Sum_probs=82.2

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcc-eE-EEEeCCeEEEEEecCCCC-CC----CCC-------
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYR-GA-WLWVGAEMIHLMELPNPD-PL----SGR-------  114 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~-~~-~~~~g~~~l~L~~~~~~~-~~----~~~-------  114 (172)
                      +.-..|+.+.|.|++++++||+++|||+............. .. .+..++..+.+....... ..    ...       
T Consensus        11 i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (172)
T d1sp8a1          11 TLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAAR   90 (172)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHHH
T ss_pred             cCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchhh
Confidence            44456899999999999999999999998753321111111 11 133344444443221110 00    000       


Q ss_pred             ---CCCCCCcceEEEEECCHHHHHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEeec
Q 030725          115 ---PEHGGRDRHTCIAIRDVSKLKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQVD  171 (172)
Q Consensus       115 ---p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~~  171 (172)
                         ..++.+..||||.|+|+++++++|+++|+++..+    .+|.+.++++-|.+..+||+++.
T Consensus        91 ~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~  154 (172)
T d1sp8a1          91 RFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  154 (172)
T ss_dssp             HHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             hhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecC
Confidence               0113456899999999999999999999998643    46778889999988889999975

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.24  E-value=3.7e-10  Score=79.52  Aligned_cols=116  Identities=13%  Similarity=0.019  Sum_probs=74.7

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCC------------cceEEEEeCCeEEEEEecCCCCCCCCCCC
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLP------------YRGAWLWVGAEMIHLMELPNPDPLSGRPE  116 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~------------~~~~~~~~g~~~l~L~~~~~~~~~~~~p~  116 (172)
                      |++.-++.+. .|-++|++||+++||+++......+...            ...+-+.+++..+.+.......     +.
T Consensus         2 ~~i~pyl~f~-g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~~~-----~~   75 (137)
T d1u6la_           2 LQIVPYLIFN-GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPAY-----PY   75 (137)
T ss_dssp             CEEEEEEEES-SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTTS-----CC
T ss_pred             ceEEEEEEEC-CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCCcc-----cc
Confidence            4555555552 3899999999999999986422111110            0113356666655554332111     11


Q ss_pred             CCCCcceEEEEECCHHH--HHHHHHHCCCeEEec----CCCceEEEEECCCCCEEEEEee
Q 030725          117 HGGRDRHTCIAIRDVSK--LKMILDKAGISYTLS----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       117 ~~g~~~Hi~f~V~dld~--~~~~L~~~Gv~i~~~----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ..+...++++.+++.|.  .+.+..++|+++..+    +||.+.++|+||+|+.|+|...
T Consensus        76 ~~~~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          76 EGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             CCCCSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEES
T ss_pred             cCCCcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEec
Confidence            22344789999887653  466666789988733    7898999999999999999754

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.14  E-value=3.2e-11  Score=87.13  Aligned_cols=113  Identities=10%  Similarity=-0.050  Sum_probs=77.9

Q ss_pred             EEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCCcceEEEEeCCeEEEEEecCCCCCCC--CCCCCCCCcceEEEEE
Q 030725           51 TKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLS--GRPEHGGRDRHTCIAI  128 (172)
Q Consensus        51 ~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~g~~~l~L~~~~~~~~~~--~~p~~~g~~~Hi~f~V  128 (172)
                      -..|+.++|.|++++.+||+. |||+...+..    ......+..|+.  .++....+....  ....++.+.+|+||+|
T Consensus         9 Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~----~~~~~l~~~G~i--~ll~~~~~~s~~~~~~~~hg~gv~hiaf~V   81 (150)
T d1cjxa1           9 GFEFIEFASPTPGTLEPIFEI-MGFTKVATHR----SKNVHLYRQGEI--NLILNNEPNSIASYFAAEHGPSVCGMAFRV   81 (150)
T ss_dssp             EEEEEEEECSSTTSSHHHHHH-TTCEEEEEES----SSSEEEEEETTE--EEEEECCSSSHHHHHHHHHSSEEEEEEEEE
T ss_pred             CEEEEEEecCCHHHHHHHHHH-hCCEEEeccc----ceEEEEEecCcE--EEEecCCCCCHhHhHHhhCCCceEEEEEEe
Confidence            345899999999999999986 9999876322    122334455553  333222111110  0012345679999999


Q ss_pred             CCHHHHHHHHHHCCCeEEec---CCCceEEEEECCCCCEEEEEee
Q 030725          129 RDVSKLKMILDKAGISYTLS---KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       129 ~dld~~~~~L~~~Gv~i~~~---~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      +|++++++++.++|+++...   ........+++|+|.++.|+++
T Consensus        82 ~D~~~a~~~a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~  126 (150)
T d1cjxa1          82 KDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDR  126 (150)
T ss_dssp             SCHHHHHHHHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECC
T ss_pred             CCHHHHHHHHHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECc
Confidence            99999999999999987643   3344566788999999999886

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.91  E-value=1e-07  Score=66.82  Aligned_cols=113  Identities=7%  Similarity=-0.076  Sum_probs=71.8

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeec---CC---C-CCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcc
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEAR---PH---D-KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDR  122 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~---~~---~-~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~  122 (172)
                      ++.-++.+..++-+++++||+++||.+.....   +.   + ....-.+-+.+++..+.+.......+    +. .+...
T Consensus         5 ~l~PyL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~~~~----~~-~~~~~   79 (134)
T d1u7ia_           5 RVRPFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHVRHA----FD-FTPAF   79 (134)
T ss_dssp             EEEEEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESSCCS----CC-CCTTE
T ss_pred             cEEEEEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCCCCC----CC-CCCce
Confidence            34556666666899999999999998754311   11   0 11122345677887777765432111    11 22335


Q ss_pred             eEEEEECCHHH---HHHHHHHCCCeEEe----cCCCceEEEEECCCCCEEEEE
Q 030725          123 HTCIAIRDVSK---LKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       123 Hi~f~V~dld~---~~~~L~~~Gv~i~~----~~~g~~~~y~~DPDGn~iEl~  168 (172)
                      .+++.+++.|+   +.+.| ++|.++..    ..||.+...++||.|+.|.|.
T Consensus        80 s~~l~~~~~d~~~~~~~~l-~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          80 SFFVDCESNAQIERLAEAL-SDGGKALMPLGDYGFSQRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             EEEEECCCHHHHHHHHHHH-HTTSEEEEEEECCSSSSEEEEEECTTSCEEEEE
T ss_pred             EEEEEeccHHHHHHHHHHH-hcCCEEecCcccccccceEEEEECCCCCEEEEE
Confidence            78888887554   44444 55777753    268989999999999999985

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.79  E-value=8.3e-09  Score=78.86  Aligned_cols=95  Identities=11%  Similarity=-0.020  Sum_probs=58.7

Q ss_pred             eEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCC--Cc---ceEEEEeC--CeEEEEEecCCCCCCCCCC------C
Q 030725           50 TTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKL--PY---RGAWLWVG--AEMIHLMELPNPDPLSGRP------E  116 (172)
Q Consensus        50 ~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~--~~---~~~~~~~g--~~~l~L~~~~~~~~~~~~p------~  116 (172)
                      +-.-|+++.|.|+++++.||+++|||+...+.+....  .+   ....+..+  ...+.+.+...+.......      .
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~FL~~~   87 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTFLDHH   87 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHHHHhc
Confidence            3345899999999999999999999998653321111  11   11122222  3356666543221111100      1


Q ss_pred             CCCCcceEEEEECCHHHHHHHHHHCCCe
Q 030725          117 HGGRDRHTCIAIRDVSKLKMILDKAGIS  144 (172)
Q Consensus       117 ~~g~~~Hi~f~V~dld~~~~~L~~~Gv~  144 (172)
                      .+.+.+||||.|+|+++.++.|+++|+.
T Consensus        88 ~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          88 GGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             TSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             cCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence            1346799999999999999999987643

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.68  E-value=1.9e-08  Score=75.67  Aligned_cols=97  Identities=10%  Similarity=-0.049  Sum_probs=59.0

Q ss_pred             eEEEeeeeecC--ChHHHHHHhHhccCCEEeeec--CCCCCCcceEEEEeCC--eEEEEEecCCCCCCC-CC---CCCCC
Q 030725           50 TTKAKMSVEGG--ILKKEPIRDSDKIGLEINEAR--PHDKLPYRGAWLWVGA--EMIHLMELPNPDPLS-GR---PEHGG  119 (172)
Q Consensus        50 ~~~a~~~i~~~--dle~s~~FY~~vLG~~~~~~~--~~~~~~~~~~~~~~g~--~~l~L~~~~~~~~~~-~~---p~~~g  119 (172)
                      +-.-|+++.|.  ++++++.||+++|||+.....  +..........+...+  ..+.+...+...... ..   ...+.
T Consensus         4 ~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~   83 (203)
T d1cjxa2           4 KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGE   83 (203)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSS
T ss_pred             CeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCC
Confidence            33447778775  899999999999999986532  1111111112222222  233333222111110 00   01234


Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEE
Q 030725          120 RDRHTCIAIRDVSKLKMILDKAGISYT  146 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~~Gv~i~  146 (172)
                      +.+|+||.|+|+.+.+++|+++|+++.
T Consensus        84 GiqHIAf~vdDI~aav~~L~~~Gv~fL  110 (203)
T d1cjxa2          84 GIQHVAFLTDDLVKTWDALKKIGMRFM  110 (203)
T ss_dssp             BCCEEEEEESCHHHHHHHHHHTTCCBC
T ss_pred             CCceEEEEeCCHHHHHHHHHhcCCccc
Confidence            679999999999999999999999885

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.50  E-value=2e-07  Score=69.73  Aligned_cols=95  Identities=12%  Similarity=0.037  Sum_probs=57.1

Q ss_pred             EEeeeeecC--ChHHHHHHhHhccCCEEeeecCCCC--CCcceE--E-EEeCC--eEEEEEecCCCCCCC--CC--C-CC
Q 030725           52 KAKMSVEGG--ILKKEPIRDSDKIGLEINEARPHDK--LPYRGA--W-LWVGA--EMIHLMELPNPDPLS--GR--P-EH  117 (172)
Q Consensus        52 ~a~~~i~~~--dle~s~~FY~~vLG~~~~~~~~~~~--~~~~~~--~-~~~g~--~~l~L~~~~~~~~~~--~~--p-~~  117 (172)
                      .-|+++.+.  +++.++.||+++|||+.........  ..+...  . +..++  ..+.+.+.......+  .+  . ..
T Consensus         7 IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~~~~   86 (199)
T d1t47a2           7 IDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYG   86 (199)
T ss_dssp             EEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHHHT
T ss_pred             eCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhhhcC
Confidence            346777775  9999999999999999865321000  111111  1 22222  234443221111000  00  0 12


Q ss_pred             CCCcceEEEEECCHHHHHHHHHHCCCeEE
Q 030725          118 GGRDRHTCIAIRDVSKLKMILDKAGISYT  146 (172)
Q Consensus       118 ~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~  146 (172)
                      +++.+||||.|+|+.+.++.|+++|+++.
T Consensus        87 g~GiQHIAl~tdDI~~av~~L~~~G~~fL  115 (199)
T d1t47a2          87 GAGVQHIALNTGDIVETVRTMRAAGVQFL  115 (199)
T ss_dssp             SCEEEEEEEECSCHHHHHHHHHHTTCCBC
T ss_pred             CCcceEEEEEcCCHHHHHHHHHHcCCCCC
Confidence            34689999999999999999999999886

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=2.9e-07  Score=69.38  Aligned_cols=98  Identities=9%  Similarity=0.006  Sum_probs=58.5

Q ss_pred             eeEEEeeeeecCC--hHHHHHHhHhccCCEEeeecCCCC--CCcc---eEEEEeCC--eEEEEEecCCCCCCCC--C---
Q 030725           49 LTTKAKMSVEGGI--LKKEPIRDSDKIGLEINEARPHDK--LPYR---GAWLWVGA--EMIHLMELPNPDPLSG--R---  114 (172)
Q Consensus        49 l~~~a~~~i~~~d--le~s~~FY~~vLG~~~~~~~~~~~--~~~~---~~~~~~g~--~~l~L~~~~~~~~~~~--~---  114 (172)
                      ++..-|+++.|.+  +++++.||+++|||+.........  ..+.   ..-+..++  ..+.|.+.........  +   
T Consensus        22 l~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~~fl~  101 (210)
T d1sqia2          22 LEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQEYVD  101 (210)
T ss_dssp             EEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHHHHHH
T ss_pred             cceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHHHHHh
Confidence            4445578888876  999999999999998754211000  1111   11123332  2444433221110000  0   


Q ss_pred             CCCCCCcceEEEEECCHHHHHHHHHHCCCeEE
Q 030725          115 PEHGGRDRHTCIAIRDVSKLKMILDKAGISYT  146 (172)
Q Consensus       115 p~~~g~~~Hi~f~V~dld~~~~~L~~~Gv~i~  146 (172)
                      ...+.+.+||||.|+|+.+.+++|+++|+++.
T Consensus       102 ~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL  133 (210)
T d1sqia2         102 YNGGAGVQHIALRTEDIITTIRHLRERGMEFL  133 (210)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHHHHHTCCBC
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCC
Confidence            01245679999999999999999999999986

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.31  E-value=7.5e-07  Score=67.97  Aligned_cols=94  Identities=11%  Similarity=0.005  Sum_probs=57.1

Q ss_pred             eeEEEeeeeecCChHHHHHHhHhccCCEEeeecCCCCCC--cceE---EEEe--CCeEEEEEecCCCCCCCCC------C
Q 030725           49 LTTKAKMSVEGGILKKEPIRDSDKIGLEINEARPHDKLP--YRGA---WLWV--GAEMIHLMELPNPDPLSGR------P  115 (172)
Q Consensus        49 l~~~a~~~i~~~dle~s~~FY~~vLG~~~~~~~~~~~~~--~~~~---~~~~--g~~~l~L~~~~~~~~~~~~------p  115 (172)
                      |+..-|+++.|.|++++.+||+++||+............  +...   -+..  |...+.+.+...+......      .
T Consensus        20 l~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~v~~~l~E~~~~~~~~sqi~~FL~~   99 (230)
T d1sqda2          20 IRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKRKSQIQTYLEH   99 (230)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSCSEEEEEEECCC---CCHHHHHHHH
T ss_pred             cCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcccceeEEeecCCCCCcchHHHHHhh
Confidence            454567999999999999999999999886643211111  1111   1111  2235555544222110000      0


Q ss_pred             CCCCCcceEEEEECCHHHHHHHHHHCC
Q 030725          116 EHGGRDRHTCIAIRDVSKLKMILDKAG  142 (172)
Q Consensus       116 ~~~g~~~Hi~f~V~dld~~~~~L~~~G  142 (172)
                      ..+.+.+||||.|+|+.+.++.|+++|
T Consensus       100 ~~G~GiQHIAf~tdDI~aav~~LrarG  126 (230)
T d1sqda2         100 NEGAGLQHLALMSEDIFRTLREMRKRS  126 (230)
T ss_dssp             HTSCEEEEEEEEESCHHHHHHHHHHHG
T ss_pred             ccCCceeEEEEEeCCHHHHHHHHHHhh
Confidence            124578999999999999999999864

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.25  E-value=2.5e-05  Score=53.88  Aligned_cols=100  Identities=7%  Similarity=-0.014  Sum_probs=61.6

Q ss_pred             ChHHHHHHhHhccCCE-Eeee-c-CC----CCCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCHHH
Q 030725           61 ILKKEPIRDSDKIGLE-INEA-R-PH----DKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSK  133 (172)
Q Consensus        61 dle~s~~FY~~vLG~~-~~~~-~-~~----~~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dld~  133 (172)
                      |-+++.+||+++||-. +... + ++    .....-++-+.+++..+.+......        .. ...++++.+++.++
T Consensus        15 ~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~~--------~~-~~~s~~v~~~~~~e   85 (129)
T d1tsja_          15 QAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANSG--------TE-LPISLFVTVKDTIE   85 (129)
T ss_dssp             CHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC----------------CCCEEEECSSHHH
T ss_pred             CHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCCC--------CC-CCEEEEeccCCHHH
Confidence            8999999999999754 3221 1 10    0111223446778777666433211        01 12467888887665


Q ss_pred             ---HHHHHHHCCCeEEe----cCCCceEEEEECCCCCEEEEEee
Q 030725          134 ---LKMILDKAGISYTL----SKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       134 ---~~~~L~~~Gv~i~~----~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                         +.++|.+ |.++..    ..+|.+...++||.|+.|.|..+
T Consensus        86 ~~~~~~~L~~-gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          86 MERLFNGLKD-EGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             HHHHHHHHHT-TCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHhcc-CCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence               5566654 556653    26888889999999999999654

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.93  E-value=0.014  Score=40.92  Aligned_cols=98  Identities=12%  Similarity=-0.019  Sum_probs=58.4

Q ss_pred             CChHHHHHHhHhccCCE-Eee--ecCCC-----CCCcceEEEEeCCeEEEEEecCCCCCCCCCCCCCCCcceEEEEECCH
Q 030725           60 GILKKEPIRDSDKIGLE-INE--ARPHD-----KLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDV  131 (172)
Q Consensus        60 ~dle~s~~FY~~vLG~~-~~~--~~~~~-----~~~~~~~~~~~g~~~l~L~~~~~~~~~~~~p~~~g~~~Hi~f~V~dl  131 (172)
                      .+-++|.+||.++||-. +..  ..+..     ....-.+.+.+++..+...... +  .  .+  .+...++++.++|.
T Consensus        11 Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~-~--~--~~--~~~~~sl~l~~d~~   83 (156)
T d1u69a_          11 SAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGG-P--A--FR--HSEAFSFQVATDDQ   83 (156)
T ss_dssp             SCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECC-T--T--CC--CCTTEEEEEEESSH
T ss_pred             CcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCC-C--C--CC--CCCCeEEEEecCCH
Confidence            57899999999999643 322  11110     0112234577777655443321 1  1  11  12336888999874


Q ss_pred             ---HHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEEee
Q 030725          132 ---SKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       132 ---d~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                         +++++.|.+.| ++... .|    .++|+.|..|.|..+
T Consensus        84 eE~d~~f~~LsegG-~~~~~-~G----~v~DkFGV~Wqi~~~  119 (156)
T d1u69a_          84 AETDRLWNAIVDNG-GEESA-CG----WCRDKWGISWQITPR  119 (156)
T ss_dssp             HHHHHHHHHHHHTT-CEECS-TT----EEECTTSCEEEEEEH
T ss_pred             HHHHHHHHHHhccC-CCCCC-Ce----EEECCCCCEEEeChH
Confidence               56677887766 33322 23    599999999999853

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=92.34  E-value=0.32  Score=30.29  Aligned_cols=49  Identities=20%  Similarity=0.308  Sum_probs=38.4

Q ss_pred             cceEEEEECCHHHHHHHHHH-CCCeEEecCCCceEEEEECCCCCEEEEEee
Q 030725          121 DRHTCIAIRDVSKLKMILDK-AGISYTLSKSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       121 ~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      ..|+.+.|+|+++..+...+ .|.++.....+ ..+|..++++..+.+.+.
T Consensus         4 i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-~~~~~~~~~~~~~~~~~~   53 (113)
T d1xqaa_           4 IKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-AFAVMRDNDGFILTLMKG   53 (113)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-TEEEEECTTCCEEEEEEC
T ss_pred             ccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-cceeeeecceeeeeeeee
Confidence            57999999999999988777 79888654333 456778888888888764

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=91.01  E-value=0.32  Score=31.82  Aligned_cols=50  Identities=12%  Similarity=0.259  Sum_probs=36.9

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEec---------------CCCceEEEEECCCC-CEEEEEe
Q 030725          120 RDRHTCIAIRDVSKLKMILDKAGISYTLS---------------KSGRPAIFTRDPDA-NALEFTQ  169 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~---------------~~g~~~~y~~DPDG-n~iEl~e  169 (172)
                      +.+|+++.|.|+++..+..++.|..+...               ......+++..++| ..+++.+
T Consensus         9 ri~Hv~i~v~Dle~s~~FY~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~   74 (149)
T d1ss4a_           9 RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSR   74 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEE
T ss_pred             EEeEEEEEeCCHHHHHHHHHHcCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEe
Confidence            57899999999999999888889876521               11234677788875 4677765

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=89.91  E-value=0.69  Score=31.15  Aligned_cols=52  Identities=12%  Similarity=0.103  Sum_probs=35.7

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEec-----CCCceEEEEECCCCCEEEEEee
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS-----KSGRPAIFTRDPDANALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~-----~~g~~~~y~~DPDGn~iEl~e~  170 (172)
                      .+.+|++|.|.|+++..+...+ .|.+....     .......++....+..++|.+.
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~   63 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSV   63 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEE
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEecc
Confidence            4579999999999999999986 79987631     1122333444445666777664

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.96  E-value=0.62  Score=30.80  Aligned_cols=27  Identities=7%  Similarity=0.004  Sum_probs=23.3

Q ss_pred             CcceEEEEECCHHHHHHHHH-HCCCeEE
Q 030725          120 RDRHTCIAIRDVSKLKMILD-KAGISYT  146 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~-~~Gv~i~  146 (172)
                      +++|++|.|.|+++..+... ..|.+..
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~   38 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPL   38 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEE
Confidence            57899999999999999885 4799875

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=86.68  E-value=1.4  Score=28.16  Aligned_cols=52  Identities=12%  Similarity=0.037  Sum_probs=35.5

Q ss_pred             CCcceEEEEECCHHHHHHHHHH-CCCeEEec----CCCceEEEEEC-----CCCCEEEEEee
Q 030725          119 GRDRHTCIAIRDVSKLKMILDK-AGISYTLS----KSGRPAIFTRD-----PDANALEFTQV  170 (172)
Q Consensus       119 g~~~Hi~f~V~dld~~~~~L~~-~Gv~i~~~----~~g~~~~y~~D-----PDGn~iEl~e~  170 (172)
                      -+.+|+++.|.|+++..+..++ .|......    ..+....+...     ..+..+|+.+.
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~   67 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAP   67 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEE
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhh
Confidence            3579999999999999998876 67776422    33444443332     44668888764

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=82.69  E-value=1.2  Score=28.34  Aligned_cols=49  Identities=14%  Similarity=0.147  Sum_probs=31.3

Q ss_pred             CcceEEEEECCHHHHHHHHHHCCCeEEecCCCceEEEEECCCCCEEEEE
Q 030725          120 RDRHTCIAIRDVSKLKMILDKAGISYTLSKSGRPAIFTRDPDANALEFT  168 (172)
Q Consensus       120 ~~~Hi~f~V~dld~~~~~L~~~Gv~i~~~~~g~~~~y~~DPDGn~iEl~  168 (172)
                      +..|+++.|.|+++..+-.++.|..+.........+.+.-+++..+.+.
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~~   50 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWD   50 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHTTCCCCTTGGGCSEEEEECGGGCEEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhCCccccccccccceeeeccceeeeeec
Confidence            4689999999999999888888877653321112233344445554443