Citrus Sinensis ID: 030780


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-
MGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRNYDHSTYEYDNVY
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHHHHcHHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccccccccccccccc
ccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccc
MGSGAGSFLKVLLKNfdvlagpvvsLVYPLYASVRAietksptddrqWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYehylrpfflnpqtiniwyvprkkdvfsrpDDILTAAEKYMEENGTDAFEKLIHRADkskrnydhstyeydnvy
MGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAietksptddrqwLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIHradkskrnydhstyeydnvy
MGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRNYDHSTYEYDNVY
******SFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKY**********************************
*GSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDV*SRPDDILTAAEKYMEENGTDAF*************************
MGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRNYDHSTYEYDNVY
***GAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKR*YDHSTYE*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRKKDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRNYDHSTYEYDNVY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query171 2.2.26 [Sep-21-2011]
Q9S7V4177 HVA22-like protein a OS=A yes no 1.0 0.966 0.742 2e-74
Q9S784184 HVA22-like protein c OS=A no no 0.923 0.858 0.595 1e-51
Q9SYX7167 HVA22-like protein b OS=A no no 0.970 0.994 0.552 6e-50
Q682H0158 HVA22-like protein f OS=A no no 0.900 0.974 0.420 2e-30
Q9FED2116 HVA22-like protein e OS=A no no 0.549 0.810 0.595 6e-26
Q9S760135 HVA22-like protein d OS=A no no 0.508 0.644 0.563 3e-24
Q07764130 Protein HVA22 OS=Hordeum N/A no 0.538 0.707 0.521 3e-23
P0CN16206 Protein YOP1 OS=Cryptococ yes no 0.830 0.689 0.343 3e-16
P0CN17206 Protein YOP1 OS=Cryptococ N/A no 0.830 0.689 0.343 3e-16
Q4P0H0172 Protein YOP1 OS=Ustilago N/A no 0.631 0.627 0.357 7e-13
>sp|Q9S7V4|HA22A_ARATH HVA22-like protein a OS=Arabidopsis thaliana GN=HVA22A PE=2 SV=1 Back     alignment and function desciption
 Score =  278 bits (710), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 127/171 (74%), Positives = 152/171 (88%)

Query: 1   MGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITL 60
           MGSGAG+FLKVLL+NFDVLAGPVVSLVYPLYASV+AIET+S  DD+QWLTYW+LYS++TL
Sbjct: 1   MGSGAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTL 60

Query: 61  VELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRK 120
           +ELTFAK+IEW+PIWSY KLI TCWLVIP FSGAAYVYEH++RP F+NP++INIWYVP+K
Sbjct: 61  IELTFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKK 120

Query: 121 KDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRNYDHSTYEYDNVY 171
            D+F +PDD+LTAAEKY+ ENG DAFEK++ RADKSKR   H    Y+ +Y
Sbjct: 121 MDIFRKPDDVLTAAEKYIAENGPDAFEKILSRADKSKRYNKHEYESYETMY 171





Arabidopsis thaliana (taxid: 3702)
>sp|Q9S784|HA22C_ARATH HVA22-like protein c OS=Arabidopsis thaliana GN=HVA22C PE=2 SV=1 Back     alignment and function description
>sp|Q9SYX7|HA22B_ARATH HVA22-like protein b OS=Arabidopsis thaliana GN=HVA22B PE=2 SV=2 Back     alignment and function description
>sp|Q682H0|HA22F_ARATH HVA22-like protein f OS=Arabidopsis thaliana GN=HVA22F PE=2 SV=1 Back     alignment and function description
>sp|Q9FED2|HA22E_ARATH HVA22-like protein e OS=Arabidopsis thaliana GN=HVA22E PE=2 SV=1 Back     alignment and function description
>sp|Q9S760|HA22D_ARATH HVA22-like protein d OS=Arabidopsis thaliana GN=HVA22D PE=2 SV=1 Back     alignment and function description
>sp|Q07764|HVA22_HORVU Protein HVA22 OS=Hordeum vulgare GN=HVA22 PE=2 SV=1 Back     alignment and function description
>sp|P0CN16|YOP1_CRYNJ Protein YOP1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=YOP1 PE=3 SV=1 Back     alignment and function description
>sp|P0CN17|YOP1_CRYNB Protein YOP1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=YOP1 PE=3 SV=1 Back     alignment and function description
>sp|Q4P0H0|YOP1_USTMA Protein YOP1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=YOP1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query171
255540991171 Protein HVA22, putative [Ricinus communi 0.929 0.929 0.856 8e-77
388496132169 unknown [Lotus japonicus] 0.970 0.982 0.783 4e-74
351727014170 uncharacterized protein LOC100306331 [Gl 0.994 1.0 0.777 7e-74
388504736169 unknown [Lotus japonicus] 0.970 0.982 0.777 1e-73
15221266177 HVA22-like protein a [Arabidopsis thalia 1.0 0.966 0.742 7e-73
297842201176 hypothetical protein ARALYDRAFT_476588 [ 0.970 0.943 0.754 1e-72
356562824170 PREDICTED: HVA22-like protein a-like [Gl 0.994 1.0 0.760 1e-72
225456735167 PREDICTED: HVA22-like protein a [Vitis v 0.929 0.952 0.786 1e-71
449477281185 PREDICTED: HVA22-like protein a-like iso 0.964 0.891 0.757 2e-71
224119096169 predicted protein [Populus trichocarpa] 0.929 0.940 0.812 2e-71
>gi|255540991|ref|XP_002511560.1| Protein HVA22, putative [Ricinus communis] gi|223550675|gb|EEF52162.1| Protein HVA22, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  291 bits (744), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 137/160 (85%), Positives = 152/160 (95%), Gaps = 1/160 (0%)

Query: 1   MGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITL 60
           MGSGAGSFLK+LLKNFDVLAGPVVSLVYPLYAS+RAIETKSP DD+QWLTYW+LYSMITL
Sbjct: 1   MGSGAGSFLKILLKNFDVLAGPVVSLVYPLYASIRAIETKSPIDDQQWLTYWVLYSMITL 60

Query: 61  VELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNP-QTINIWYVPR 119
            ELTFAKVIEWIPIWSYAKLI TCWLVIP FSGAAYVYEH++RP F+NP QTIN+WYVPR
Sbjct: 61  FELTFAKVIEWIPIWSYAKLIVTCWLVIPYFSGAAYVYEHFVRPLFVNPQQTINVWYVPR 120

Query: 120 KKDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRN 159
           KKD+FS+ DDILTAAE+Y+EENGT+AFEKLIHRADKS+ +
Sbjct: 121 KKDIFSKKDDILTAAERYIEENGTEAFEKLIHRADKSRSS 160




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496132|gb|AFK36132.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|351727014|ref|NP_001237146.1| uncharacterized protein LOC100306331 [Glycine max] gi|255628223|gb|ACU14456.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388504736|gb|AFK40434.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|15221266|ref|NP_177592.1| HVA22-like protein a [Arabidopsis thaliana] gi|57012625|sp|Q9S7V4.1|HA22A_ARATH RecName: Full=HVA22-like protein a; Short=AtHVA22a gi|4884944|gb|AAD31885.1|AF141977_1 AtHVA22a [Arabidopsis thaliana] gi|12324799|gb|AAG52361.1|AC011765_13 AtHVA22a; 65476-64429 [Arabidopsis thaliana] gi|4884932|gb|AAD31879.1| AtHVA22a [Arabidopsis thaliana] gi|26452664|dbj|BAC43415.1| putative AtHVA22a [Arabidopsis thaliana] gi|28973175|gb|AAO63912.1| putative AtHVA22a protein [Arabidopsis thaliana] gi|332197482|gb|AEE35603.1| HVA22-like protein a [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297842201|ref|XP_002888982.1| hypothetical protein ARALYDRAFT_476588 [Arabidopsis lyrata subsp. lyrata] gi|297334823|gb|EFH65241.1| hypothetical protein ARALYDRAFT_476588 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356562824|ref|XP_003549668.1| PREDICTED: HVA22-like protein a-like [Glycine max] Back     alignment and taxonomy information
>gi|225456735|ref|XP_002275428.1| PREDICTED: HVA22-like protein a [Vitis vinifera] gi|147835139|emb|CAN76903.1| hypothetical protein VITISV_016346 [Vitis vinifera] gi|297733995|emb|CBI15242.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449477281|ref|XP_004154980.1| PREDICTED: HVA22-like protein a-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224119096|ref|XP_002317984.1| predicted protein [Populus trichocarpa] gi|118488636|gb|ABK96130.1| unknown [Populus trichocarpa] gi|222858657|gb|EEE96204.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query171
TAIR|locus:2019225177 HVA22A "AT1G74520" [Arabidopsi 1.0 0.966 0.742 2.3e-71
TAIR|locus:2205055184 HVA22C "AT1G69700" [Arabidopsi 0.912 0.847 0.602 8.3e-51
TAIR|locus:2154139167 HVA22B "AT5G62490" [Arabidopsi 0.970 0.994 0.552 8.5e-49
TAIR|locus:2052339158 HVA22F "AT2G42820" [Arabidopsi 0.894 0.968 0.423 6e-32
TAIR|locus:2163290116 HVA22E "AT5G50720" [Arabidopsi 0.514 0.758 0.625 7.3e-27
TAIR|locus:2117318135 HVA22D "AT4G24960" [Arabidopsi 0.508 0.644 0.563 2.9e-25
POMBASE|SPCC830.08c182 yop1 "ER membrane protein DP1/ 0.649 0.609 0.327 3.7e-16
ZFIN|ZDB-GENE-040912-98208 reep6 "receptor accessory prot 0.578 0.475 0.375 1.3e-15
WB|WBGene00022127183 yop-1 [Caenorhabditis elegans 0.473 0.442 0.370 5.4e-15
GENEDB_PFALCIPARUM|PFC0730w221 PFC0730w "conserved protein, p 0.497 0.384 0.364 6.9e-15
TAIR|locus:2019225 HVA22A "AT1G74520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
 Identities = 127/171 (74%), Positives = 152/171 (88%)

Query:     1 MGSGAGSFLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITL 60
             MGSGAG+FLKVLL+NFDVLAGPVVSLVYPLYASV+AIET+S  DD+QWLTYW+LYS++TL
Sbjct:     1 MGSGAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTL 60

Query:    61 VELTFAKVIEWIPIWSYAKLIFTCWLVIPQFSGAAYVYEHYLRPFFLNPQTINIWYVPRK 120
             +ELTFAK+IEW+PIWSY KLI TCWLVIP FSGAAYVYEH++RP F+NP++INIWYVP+K
Sbjct:    61 IELTFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKK 120

Query:   121 KDVFSRPDDILTAAEKYMEENGTDAFEKLIHRADKSKRNYDHSTYEYDNVY 171
              D+F +PDD+LTAAEKY+ ENG DAFEK++ RADKSKR   H    Y+ +Y
Sbjct:   121 MDIFRKPDDVLTAAEKYIAENGPDAFEKILSRADKSKRYNKHEYESYETMY 171




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0009409 "response to cold" evidence=IEP;RCA
GO:0009414 "response to water deprivation" evidence=IEP
GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA
GO:0042538 "hyperosmotic salinity response" evidence=IEP
GO:0009269 "response to desiccation" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
TAIR|locus:2205055 HVA22C "AT1G69700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154139 HVA22B "AT5G62490" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052339 HVA22F "AT2G42820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163290 HVA22E "AT5G50720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117318 HVA22D "AT4G24960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPCC830.08c yop1 "ER membrane protein DP1/Yop1" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040912-98 reep6 "receptor accessory protein 6" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00022127 yop-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFC0730w PFC0730w "conserved protein, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9S7V4HA22A_ARATHNo assigned EC number0.74261.00.9661yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query171
pfam0313494 pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family 4e-37
COG5052186 COG5052, YOP1, Protein involved in membrane traffi 3e-20
>gnl|CDD|217381 pfam03134, TB2_DP1_HVA22, TB2/DP1, HVA22 family Back     alignment and domain information
 Score =  122 bits (309), Expect = 4e-37
 Identities = 38/88 (43%), Positives = 58/88 (65%)

Query: 19  LAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYA 78
           L   ++  +YP YAS +A+E+K   DD QWLTYW++YS +TL E     ++ WIP +   
Sbjct: 7   LLSNLIGFLYPAYASYKALESKDKEDDTQWLTYWVVYSFLTLFESFSDIILSWIPFYYEL 66

Query: 79  KLIFTCWLVIPQFSGAAYVYEHYLRPFF 106
           KL+F  WLV+P+  GA+Y+Y+ ++RP  
Sbjct: 67  KLLFLVWLVLPKTQGASYIYDKFIRPLL 94


This family includes members from a wide variety of eukaryotes. It includes the TB2/DP1 (deleted in polyposis) protein, which in humans is deleted in severe forms of familial adenomatous polyposis, an autosomal dominant oncological inherited disease. The family also includes the plant protein of known similarity to TB2/DP1, the HVA22 abscisic acid-induced protein, which is thought to be a regulatory protein. Length = 94

>gnl|CDD|227385 COG5052, YOP1, Protein involved in membrane traffic [Intracellular trafficking and secretion] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 171
KOG1725186 consensus Protein involved in membrane traffic (YO 99.98
PF0313494 TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IP 99.97
KOG1726225 consensus HVA22/DP1 gene product-related proteins 99.96
COG5052186 YOP1 Protein involved in membrane traffic [Intrace 99.85
KOG1726225 consensus HVA22/DP1 gene product-related proteins 82.83
>KOG1725 consensus Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family) [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
Probab=99.98  E-value=2.9e-33  Score=226.61  Aligned_cols=104  Identities=49%  Similarity=0.957  Sum_probs=100.1

Q ss_pred             HHHHHHHhchhhhHhHHHhHhhHHHHHHHhhcCChhhhhhHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHhh
Q 030780            8 FLKVLLKNFDVLAGPVVSLVYPLYASVRAIETKSPTDDRQWLTYWILYSMITLVELTFAKVIEWIPIWSYAKLIFTCWLV   87 (171)
Q Consensus         8 ~~~~~~~~~~~l~~~~ig~lYPayaS~kal~s~~~~d~~~WL~YWvvy~~~~~~E~~~~~il~wiPfY~~~Kl~fl~wL~   87 (171)
                      .+.++++++..++|+++|++||+|+|++|||++++.||+|||+||++||+++++|.+...+++|+|+|+++|++|++||+
T Consensus        49 ~v~l~~g~~~~l~cn~ig~~yP~y~Sv~aIes~~k~dD~~wL~YWivys~lslie~~~~~il~~iP~y~~~K~~fl~~l~  128 (186)
T KOG1725|consen   49 AVYLLFGSGGPLLCNLIGFLYPAYASVKAIESPSKDDDTQWLTYWIVYSILSLVEFFSVAILSWIPFYWYAKLIFLLWLV  128 (186)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHHhhhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHh
Confidence            45588899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcHHHHHHHhhcccccCccc
Q 030780           88 IPQFSGAAYVYEHYLRPFFLNPQT  111 (171)
Q Consensus        88 ~P~~~GA~~iY~~~i~P~l~~~~~  111 (171)
                      +|+++||..+|++++||++.+++.
T Consensus       129 lP~~~Ga~~iY~~~vrp~~~~~~~  152 (186)
T KOG1725|consen  129 LPQFNGAAIIYNHIVRPFFLKHSR  152 (186)
T ss_pred             ccCCCCceeeechhhhhhhhhhhh
Confidence            999999999999999999988873



>PF03134 TB2_DP1_HVA22: TB2/DP1, HVA22 family; InterPro: IPR004345 This family includes members from a wide variety of eukaryotes Back     alignment and domain information
>KOG1726 consensus HVA22/DP1 gene product-related proteins [Defense mechanisms] Back     alignment and domain information
>COG5052 YOP1 Protein involved in membrane traffic [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1726 consensus HVA22/DP1 gene product-related proteins [Defense mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00