Citrus Sinensis ID: 030847

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Protein Sequence
MEKRKMEIFMFSTKNNKILLTSFLILLLSPIAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGELKNHVRKEKGFVEAMR
Secondary Structure (PSIPRED)
cccccHHHHHHHHcHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccccEEEEEccccEEEEEEccEEEEEEccEEEEccEEEEEEEcccEEcccccEEEEEEEEEEEEEEEEEcccccEEEEEEEEEEEccccccccccccccccccccccHHHHHcHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccccHEEEEEEHHHHHccccccccHHHHHHHccccccccccccEEEEEccccEEEEEEcccEEEEEEEEEEEccEEEEEEEcccEccccEEEEEEEEEEEEEEEEEEccccccEEEEEEEEEEccccHHHcccccccccccccccccccccccEEccc
Coil and Loop (DISEMBL)
MEKRKMEIFMFSTKNNKILLTSFLILLLSPIAFSSSIHDLLKarglpagllpkevksyalyengtlevelqgpcftkyenrVFFESVFRANLSygsltgveglsqeelfiwlpvkdiivddptsgLILFDIVVAHKELslslfedppdckpqgelknhvrKEKGFVEAMR
Flexible Loop (DISEMBL)
MEKRKMEIFMFSTKNNKILLTSFLILLLSPIAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFedppdckpqgelknhvrkekgfveamr
Low Complexity Region (SEG)
MEKRKMEIFMFSTKNNKilltsflilllsPIAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGELKNHVRKEKGFVEAMR
Disordered region (IsUnstruct)
*******IFMFSTKNNKILLTSFLILLLSPIAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLF***************************
Disordered Region (DISOPRED)
**********FSTKNNKILLTSFLILLLSPIAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDC*********************
Disordered Region (DISEMBL)
MEKRKMEIFMFSTKNNKILLTSFLILLLSPIAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGELKNHVRKEKGFVEAMR
Disordered Region (DISPRO)
****KMEIFMFSTKNNKILLTSFLILLLSPIAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGELKNH************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEKRKMEIFMFSTKNNKILLTSFLILLLSPIAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGELKNHVRKEKGFVEAMR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	170
224124164	165	predicted protein [Populus trichocarpa]	0.923	0.951	0.731	2e-58
118481326	165	unknown [Populus trichocarpa]	0.923	0.951	0.725	3e-58
388507326	161	unknown [Lotus japonicus]	0.788	0.832	0.783	1e-56
351722875	169	uncharacterized protein LOC100500370 pre	0.8	0.804	0.742	7e-54
449464436	167	PREDICTED: uncharacterized protein LOC10	0.770	0.784	0.766	2e-52
356543197	173	PREDICTED: uncharacterized protein LOC10	0.782	0.768	0.746	8e-52
225461195	154	PREDICTED: uncharacterized protein LOC10	0.770	0.850	0.740	1e-51
388522927	161	unknown [Medicago truncatula]	0.782	0.826	0.738	1e-51
224115150	152	predicted protein [Populus trichocarpa]	0.817	0.914	0.715	2e-51
449522393	163	PREDICTED: uncharacterized protein LOC10	0.8	0.834	0.708	6e-51

>gi|224124164|ref|XP_002319261.1| predicted protein [Populus trichocarpa] gi|222857637|gb|EEE95184.1| predicted protein [Populus trichocarpa]

 Score =  229 bits (585), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 117/160 (73%), Positives = 134/160 (83%), Gaps = 3/160 (1%)

Query: 10  MFSTKNNKILLTSF-LILLLSP-IAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLE 67
           +F+T+   +   +  L++L SP ++FSSSIHDLL ++GLPAGLLPKEVKSY L E+G LE
Sbjct: 3   IFNTRTRIVFFCTLSLLVLFSPRLSFSSSIHDLLISKGLPAGLLPKEVKSYTLSEDGYLE 62

Query: 68  VELQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLI 127
           V L GPC TKYENRVFFESV RANL+Y SL+GV GLSQEELF+WLPVKDIIVDDP SGLI
Sbjct: 63  VFLDGPCLTKYENRVFFESVVRANLTYRSLSGVVGLSQEELFLWLPVKDIIVDDPGSGLI 122

Query: 128 LFDIVVAHKELSLSLFEDPPDCKPQ-GELKNHVRKEKGFV 166
           LFDI VAHK+LSLSLFEDPP CKPQ GELK+H RKEKGF 
Sbjct: 123 LFDIGVAHKQLSLSLFEDPPSCKPQGGELKHHARKEKGFA 162

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481326|gb|ABK92606.1| unknown [Populus trichocarpa]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 116/160 (72%), Positives = 134/160 (83%), Gaps = 3/160 (1%)

Query: 10  MFSTKNNKILLTSF-LILLLSP-IAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLE 67
           +F+T+   +   +  L+++ SP ++FSSSIHDLL ++GLPAGLLPKEVKSY L E+G LE
Sbjct: 3   IFNTRTRIVFFCTLSLLVIFSPRLSFSSSIHDLLISKGLPAGLLPKEVKSYTLSEDGYLE 62

Query: 68  VELQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLI 127
           V L GPC TKYENRVFFESV RANL+Y SL+GV GLSQEELF+WLPVKDIIVDDP SGLI
Sbjct: 63  VFLDGPCLTKYENRVFFESVVRANLTYRSLSGVVGLSQEELFLWLPVKDIIVDDPGSGLI 122

Query: 128 LFDIVVAHKELSLSLFEDPPDCKPQ-GELKNHVRKEKGFV 166
           LFDI VAHK+LSLSLFEDPP CKPQ GELK+H RKEKGF 
Sbjct: 123 LFDIGVAHKQLSLSLFEDPPSCKPQGGELKHHARKEKGFA 162

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507326|gb|AFK41729.1| unknown [Lotus japonicus]

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 105/134 (78%), Positives = 117/134 (87%)

Query: 37  IHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGS 96
           IHDLLK++GLPAGLLP EVKS+  YENG LEV L  PC TKYENRV+FE V  ANL+YGS
Sbjct: 28  IHDLLKSKGLPAGLLPSEVKSFTFYENGRLEVFLNAPCLTKYENRVYFERVVTANLTYGS 87

Query: 97  LTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGELK 156
           L GVEGL QEELF+WLPVKDIIVDDP+SGLILFDI +AHK+LSLSLFEDPP CKP+G L+
Sbjct: 88  LIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPEGGLR 147

Query: 157 NHVRKEKGFVEAMR 170
           NHVRKEKGF EA+R
Sbjct: 148 NHVRKEKGFFEALR 161

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351722875|ref|NP_001237003.1| uncharacterized protein LOC100500370 precursor [Glycine max] gi|255630147|gb|ACU15427.1| unknown [Glycine max]

 Score =  214 bits (546), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 101/136 (74%), Positives = 115/136 (84%)

Query: 35  SSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSY 94
           ++IHDLL+++GLP GLLP+EVKSY   E G LEV L  PC TKYENRV FE V  ANL+Y
Sbjct: 34  TTIHDLLRSKGLPPGLLPEEVKSYTFSETGHLEVFLDAPCLTKYENRVLFEQVVTANLTY 93

Query: 95  GSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGE 154
           GSL GVEGL QEELF+WLPVKDIIV+DP+SGLILFDI +AHK+LSLSLFEDPP CK QG 
Sbjct: 94  GSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAHKQLSLSLFEDPPHCKNQGG 153

Query: 155 LKNHVRKEKGFVEAMR 170
           L+NHVRKEKGF EA+R
Sbjct: 154 LRNHVRKEKGFFEALR 169

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464436|ref|XP_004149935.1| PREDICTED: uncharacterized protein LOC101212020 [Cucumis sativus] gi|449497076|ref|XP_004160304.1| PREDICTED: uncharacterized protein LOC101230937 [Cucumis sativus]

 Score =  210 bits (534), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 102/133 (76%), Positives = 115/133 (86%), Gaps = 2/133 (1%)

Query: 35  SSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSY 94
           ++IHDLL+++GLP GLLPKEVKSY+L  NG L+V L GPC TKYENRV FESV  ANLSY
Sbjct: 31  TTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLKVFLDGPCLTKYENRVIFESVVTANLSY 90

Query: 95  GSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQ-- 152
           GSL GV+GL+QEELF+WLPVKDIIVDDP SGLILFDI VAHK+L+LSLFEDPP CK Q  
Sbjct: 91  GSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKSQSK 150

Query: 153 GELKNHVRKEKGF 165
           G L+NHVRKEKGF
Sbjct: 151 GVLRNHVRKEKGF 163

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543197|ref|XP_003540049.1| PREDICTED: uncharacterized protein LOC100790931 [Glycine max]

 Score =  207 bits (528), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 100/134 (74%), Positives = 114/134 (85%), Gaps = 1/134 (0%)

Query: 37  IHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGS 96
           IHDLL+++GLP GLLP+EVKSY+  E G LEV L  PC TKYENRV FE V  ANL+YGS
Sbjct: 41  IHDLLRSKGLPPGLLPEEVKSYSFSETGHLEVFLDAPCLTKYENRVLFEQVVTANLTYGS 100

Query: 97  LTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGELK 156
           L GVEGL QEELF+WLPVKDIIV+DP+SGLILFDI +AHK+LSLSLFEDPP CK +G L+
Sbjct: 101 LIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAHKQLSLSLFEDPPHCKHEGGLR 160

Query: 157 NHVRKEKGFVEAMR 170
           NHVRKEKGF EA+R
Sbjct: 161 NHVRKEKGF-EALR 173

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461195|ref|XP_002283200.1| PREDICTED: uncharacterized protein LOC100260725 [Vitis vinifera] gi|302143173|emb|CBI20468.3| unnamed protein product [Vitis vinifera]

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 97/131 (74%), Positives = 112/131 (85%)

Query: 35  SSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSY 94
            +IHDLL++RGLPAGLLPK V+SY L  +G L+V L GPC TK+E RV+F+SV  ANLSY
Sbjct: 20  DTIHDLLRSRGLPAGLLPKAVRSYTLDPDGRLQVFLDGPCLTKFETRVYFDSVVTANLSY 79

Query: 95  GSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGE 154
           G L GV GL+QEELF+WLPVKDIIVDDP SGLILFDI +AHK+LSLSLFEDPPDCKPQG 
Sbjct: 80  GGLIGVVGLTQEELFLWLPVKDIIVDDPNSGLILFDIGLAHKQLSLSLFEDPPDCKPQGS 139

Query: 155 LKNHVRKEKGF 165
           L+ +VRKEKGF
Sbjct: 140 LQKNVRKEKGF 150

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388522927|gb|AFK49525.1| unknown [Medicago truncatula]

 Score =  207 bits (526), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 99/134 (73%), Positives = 115/134 (85%), Gaps = 1/134 (0%)

Query: 37  IHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYGS 96
           IH+LL+++GLPAGLLP+E+KSY   ENG LEV L+ PC TKYENRV+FE V  ANL+YGS
Sbjct: 29  IHELLRSKGLPAGLLPEEIKSYTFSENGHLEVFLESPCLTKYENRVYFEQVITANLTYGS 88

Query: 97  LTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGELK 156
           L GVEGL QEELF+WLPVKDIIVDDP+SGLILFDI +A+K+LS SLFE PP CKPQ  LK
Sbjct: 89  LIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAYKQLSFSLFEVPPHCKPQDVLK 148

Query: 157 NHVRKEKGFVEAMR 170
           NHVRKE+GF EA+R
Sbjct: 149 NHVRKERGF-EAVR 161

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115150|ref|XP_002316955.1| predicted protein [Populus trichocarpa] gi|222860020|gb|EEE97567.1| predicted protein [Populus trichocarpa]

 Score =  206 bits (524), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 103/144 (71%), Positives = 119/144 (82%), Gaps = 5/144 (3%)

Query: 15  NNKILLTSF----LILLLSP-IAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVE 69
           N K ++ S     L+ + SP ++FSSSIHDLL ++GLPAGLLPKEVKSY + E+G LEV 
Sbjct: 5   NTKTIIVSLCTLSLVFIFSPQLSFSSSIHDLLISKGLPAGLLPKEVKSYTVSEDGYLEVF 64

Query: 70  LQGPCFTKYENRVFFESVFRANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILF 129
           L GPC T+YENRV FESV RANL+Y SL+GV GLSQEELF+WLPVKDI VDDP SGLILF
Sbjct: 65  LDGPCLTRYENRVLFESVVRANLTYLSLSGVVGLSQEELFLWLPVKDITVDDPRSGLILF 124

Query: 130 DIVVAHKELSLSLFEDPPDCKPQG 153
           DI VAHK+LSLSLFEDPP+CKPQG
Sbjct: 125 DIGVAHKQLSLSLFEDPPNCKPQG 148

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522393|ref|XP_004168211.1| PREDICTED: uncharacterized protein LOC101229178 [Cucumis sativus]

 Score =  205 bits (521), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 97/137 (70%), Positives = 115/137 (83%), Gaps = 1/137 (0%)

Query: 34  SSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLS 93
           SSSIH LL++ GLPAGL+PK+ KSY L ENG LEV L  PC  KYENRV F++VF ANLS
Sbjct: 28  SSSIHSLLRSMGLPAGLVPKQAKSYTLAENGRLEVYLDAPCMAKYENRVIFDTVFSANLS 87

Query: 94  YGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQG 153
           YGSL GVEG+SQEELF+WLPVKDIIV+ PTSG+IL DI VAHK+LSLSLFEDPPDC PQ 
Sbjct: 88  YGSLIGVEGMSQEELFLWLPVKDIIVNYPTSGVILIDIGVAHKQLSLSLFEDPPDCNPQV 147

Query: 154 ELKNHVRKEKGFVEAMR 170
            L+N +R+++GF E++R
Sbjct: 148 TLRNPLRRQRGF-ESLR 163

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	170
TAIR|locus:2172094	161	AT5G54530 "AT5G54530" [Arabido	0.788	0.832	0.629	3.5e-43
TAIR|locus:505006197	156	AT1G61667 "AT1G61667" [Arabido	0.8	0.871	0.598	9.6e-41
TAIR|locus:2079701	271	AT3G07460 "AT3G07460" [Arabido	0.7	0.439	0.45	4.8e-23
TAIR|locus:2079601	169	AT3G07470 [Arabidopsis thalian	0.711	0.715	0.409	2.1e-22
TAIR|locus:2171297	195	AT5G16380 "AT5G16380" [Arabido	0.670	0.584	0.452	3e-21
TAIR|locus:505006187	175	AT1G55265 [Arabidopsis thalian	0.7	0.68	0.380	9.2e-20
TAIR|locus:2147610	181	AT5G19860 "AT5G19860" [Arabido	0.782	0.734	0.315	1.3e-15
TAIR|locus:2133254	154	AT4G02360 "AT4G02360" [Arabido	0.641	0.707	0.271	3.3e-08
TAIR|locus:2063824	179	AT2G03350 "AT2G03350" [Arabido	0.688	0.653	0.308	2.3e-07
TAIR|locus:505006095	149	AT1G02813 [Arabidopsis thalian	0.652	0.744	0.267	1e-06

TAIR|locus:2172094 AT5G54530 "AT5G54530" [Arabidopsis thaliana (taxid:3702)]

 Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
 Identities = 85/135 (62%), Positives = 109/135 (80%)

Query:    36 SIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSYG 95
             ++HD+L++ GLPAGLLP+EV SY L+ +G LEV L  PC+ K+E  V FE+V R NLSYG
Sbjct:    28 TVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAKFETNVHFEAVVRGNLSYG 87

Query:    96 SLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGEL 155
             SL GVEGLSQ+ELF+WL VKDI+V++P SG+I+FDI VA K+LSLSLFEDPP CKP G L
Sbjct:    88 SLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKCKPDGVL 147

Query:   156 KNHVRKEKGFVEAMR 170
             K  +R+++GF EA +
Sbjct:   148 KKKMRRDRGF-EAQK 161

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:505006197 AT1G61667 "AT1G61667" [Arabidopsis thaliana (taxid:3702)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 82/137 (59%), Positives = 105/137 (76%)

Query:    35 SSIHDLLKARGLPAGLLPKEVKSYALYEN-GTLEVELQGPCFTKYENRVFFESVFRANLS 93
             SSI +LL+ARGLP GL P  V+SY+L +  G LEV+LQ PCF ++ENRV+F+ V +ANLS
Sbjct:    20 SSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFARFENRVYFDRVIKANLS 79

Query:    94 YGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQG 153
             YG L G+EGL+QEELF+WLPVK I V+DP+SGL+LFDI VAHK++S SLFEDPP C P G
Sbjct:    80 YGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQISRSLFEDPPVCYPPG 139

Query:   154 ELKNHVRKEKGFVEAMR 170
              +   + K K  ++  R
Sbjct:   140 SIMEKLEKSKMDIQLKR 156

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2079701 AT3G07460 "AT3G07460" [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 54/120 (45%), Positives = 72/120 (60%)

Query:    31 IAFSSSIHDLLKARGLPAGLLPKEVKSYALY-ENGTLEVELQGPCFTKYENRVFFESVFR 89
             IA + SI ++L A GLP GL PK VK + +  E G   V L   C  KYE  + ++ +  
Sbjct:    24 IAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETELHYDEIVS 83

Query:    90 ANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDC 149
               + Y  +  + G+S +ELF+WL VK I VD P+SGLI FD+ V  K+ SLSLFE P DC
Sbjct:    84 GTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDC 143

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2079601 AT3G07470 [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 50/122 (40%), Positives = 74/122 (60%)

Query:    31 IAFSSSIHDLLKARGLPAGLLPKEVKSYAL-YENGTLEVELQGPCFTKYENRVFFESVFR 89
             I+ + +I+++L A GLP+G+ PK V+ +    E G   V L   C  KYE  + +++   
Sbjct:    25 ISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANIT 84

Query:    90 ANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDC 149
               +    ++ + G+S +ELF+W PVK I VD P+SGLI FD+ V  K+ SLSLFE P DC
Sbjct:    85 GTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDC 144

Query:   150 KP 151
              P
Sbjct:   145 VP 146

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2171297 AT5G16380 "AT5G16380" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 52/115 (45%), Positives = 73/115 (63%)

Query:    36 SIHDLLKARGLPAGLLPKEVKSYAL-YENGTLEVELQGPCFTKYENRVFFESVFRANLSY 94
             S +D L+   LPAG++PK V ++++  + G   V L  PC  K+EN+  F+      LS 
Sbjct:    30 SFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCDAKFENQFHFDYNISGVLSD 89

Query:    95 GSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDC 149
             G +  + G++Q+ELF+W  VK I VD  +SGLI FD+ VA K+LSLSLFE P DC
Sbjct:    90 GRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQLSLSLFESPRDC 144

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:505006187 AT1G55265 [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 46/121 (38%), Positives = 68/121 (56%)

Query:    30 PIAFSSSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENR-VFFESVF 88
             P   +  IHDLL   G P GLLP  VKSY + ++G   V+L   C+ K+ ++ VF+    
Sbjct:    47 PSLAADDIHDLLPRYGFPKGLLPNNVKSYTISDDGDFTVDLISSCYVKFSDQLVFYGKNI 106

Query:    89 RANLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPD 148
                LSYGS+  V G+  +E F+WLP+   +  DP+S  ++F +    K L  S+FE+ P 
Sbjct:   107 AGKLSYGSVKDVRGIQAKEAFLWLPIT-AMESDPSSATVVFSVGFVSKTLPASMFENVPS 165

Query:   149 C 149
             C
Sbjct:   166 C 166

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2147610 AT5G19860 "AT5G19860" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 42/133 (31%), Positives = 70/133 (52%)

Query:    35 SSIHDLLKARGLPAGLLPKEVKSYALYENGTLEVELQGPCFTKYENRVFFESVFRANLSY 94
             S++++LL   GLP+GLLP  V  + L ++G   V L   C  +++  V ++      + Y
Sbjct:    34 STVYELLPKYGLPSGLLPDTVTDFTLSDDGRFVVHLPNSCEIEFDYLVHYDKTISGRIGY 93

Query:    95 GSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQGE 154
             GS+T ++G+  ++ FIWL V +I VD P S  I F +   +K+L +  F+    C   G 
Sbjct:    94 GSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLDIDQFKTIHSCHDNGV 153

Query:   155 LKNHVRKEKGFVE 167
               +     K F+E
Sbjct:   154 SGSCGDSWKSFLE 166

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2133254 AT4G02360 "AT4G02360" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 31/114 (27%), Positives = 56/114 (49%)

Query:    38 HDLLKARGLPAGLLPKEVKSYALY-ENGTLEVELQGPC-FTKYENRVFFESVFRANLSYG 95
             +D +K   LP G+LPK V  Y L  + G  +V     C FT    ++ ++S     +S G
Sbjct:    30 YDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTIQSYQLKYKSTISGVISPG 89

Query:    96 SLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDC 149
              +  ++G+S + LF W+ + ++ +D      + F + +A      + FE+ P C
Sbjct:    90 HVKNLKGVSVKVLFFWVNIAEVSLDGAD---LDFSVGIASASFPAANFEESPQC 140

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2063824 AT2G03350 "AT2G03350" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 38/123 (30%), Positives = 57/123 (46%)

Query:    36 SIHDLLKARGLPAGLLPKEVKSYALYEN-GTLEVELQGPCFTKYEN--RVFFESVFRANL 92
             S+ DLLK   LP GL P+ +  Y   E    L V    PC   +++   + + +  +  L
Sbjct:    58 SLPDLLKEYNLPPGLFPQNIICYEFDETKNKLTVFFSSPCEVTFKDGSAIRYATRVKGIL 117

Query:    93 SYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDC-KP 151
               G L GVEG+  + L +W+ V  I V+   S  + F   V  K  S  +++ P D  K 
Sbjct:   118 LRGKLMGVEGMKTKVL-VWVKVTTISVESSKSDKLWFTAGVK-KSRSKDVYDTPHDAIKV 175

Query:   152 QGE 154
              GE
Sbjct:   176 IGE 178

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006095 AT1G02813 [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 31/116 (26%), Positives = 55/116 (47%)

Query:    36 SIHDLLKARGLPAGLLPKEVKSYALYEN-GTLEVELQGPC-FTKYENRVFFESVFRANLS 93
             S++ +L+   LP G+LP+ V  Y L    G  +V     C F+    +V ++ V    ++
Sbjct:    24 SVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTTCQFSIDSYKVKYKPVISGIIT 83

Query:    94 YGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDC 149
              G +  + G+S + LF W+ + ++  D      + F +  A +E S   F D P C
Sbjct:    84 RGRVIRLIGVSVKVLFFWINISEVSRDGDD---VEFFVGAASEEFSSKYFVDSPKC 136

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010584 "pollen exine formation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	170
pfam04398	108	pfam04398, DUF538, Protein of unknown function, DU	5e-31

>gnl|CDD|218064 pfam04398, DUF538, Protein of unknown function, DUF538

 Score =  107 bits (270), Expect = 5e-31
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 4/110 (3%)

Query: 36  SIHDLLKARGLPAGLLPKEVKSYALYEN-GTLEVELQGPCFTKYEN-RVFFESVFRANLS 93
           + ++LL+  GLP GLLPK V  Y L E  G   V L G C   +E   V ++      +S
Sbjct: 1   TAYELLEEYGLPVGLLPKGVTEYTLDETTGKFWVYLNGTCEFTFEGYSVRYDPTVTGYIS 60

Query: 94  YGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLF 143
            G L+G+EG+  + LF+W+P+ +I VDD     + F + V  K      F
Sbjct: 61  KGRLSGLEGVKVKVLFLWVPIVEISVDD--GDKLTFSVGVLSKSFPADAF 108

This family consists of several plant proteins of unknown function. Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	170
PF04398	110	DUF538: Protein of unknown function, DUF538; Inter	100.0

>PF04398 DUF538: Protein of unknown function, DUF538; InterPro: IPR007493 This family consists of several plant proteins of unknown function

Probab=100.00  E-value=6.4e-44  Score=271.50  Aligned_cols=108  Identities=33%  Similarity=0.642  Sum_probs=81.6

Q ss_pred             hHHHHHHhcCCCCCCCCcceeeeeeccC-ceEEEEEcCeEEEEecc-eEEEeeEEEEEEecCceeccccceEEEEEeecc
Q 030847           36 SIHDLLKARGLPAGLLPKEVKSYALYEN-GTLEVELQGPCFTKYEN-RVFFESVFRANLSYGSLTGVEGLSQEELFIWLP  113 (170)
Q Consensus        36 ta~elL~e~GLP~GLLP~~V~~y~l~~t-G~f~V~L~~~C~~~~~~-~v~Y~~~ItG~i~~g~I~~L~GVkvK~lflWv~  113 (170)
                      ||||+|++||||+||||++|++|++|++ |+|||+|+++|++++++ +|+|+++|||+|++|+|++|+|||+|++|+|++
T Consensus         1 tayelL~~~glP~GLLP~~v~~y~l~~~tG~f~v~l~~~C~~~~~~~~v~Y~~~ItG~i~~g~i~~L~GVk~k~l~~W~~   80 (110)
T PF04398_consen    1 TAYELLEEYGLPRGLLPLGVTEYGLNRDTGFFWVKLKSPCEFRFEGYLVSYDSEITGYIEKGKIKNLTGVKVKELFLWVP   80 (110)
T ss_dssp             --HHHHHHHS-TT-TTTSSS-EEEE-TTT-SEEEE-SS-EEEESTTSEEEE-SEEEEEE-SS-EEEEES-EEE-SSSEES
T ss_pred             CHHHhHHHcCCCCCcCCCCceEEEEecCCcEEEEEecCCEEEEEEEEEEEEcCeEEEEECCCcCccccCEEEEEEEEEee
Confidence            7999999999999999999999999875 99999999999999996 899999999999999999999999999999999


Q ss_pred             eeEEEecCCCCCeEEEEEeeeeeeecccCcCCC
Q 030847          114 VKDIIVDDPTSGLILFDIVVAHKELSLSLFEDP  146 (170)
Q Consensus       114 I~eI~vd~~~~~~I~F~vG~isksFP~s~F~~~  146 (170)
                      |++|.+   ++++|+|++|.++++||+++|++|
T Consensus        81 v~~i~~---~~~~i~F~~g~~s~sfp~~~F~~s  110 (110)
T PF04398_consen   81 VTEISV---DGDKIYFKVGGISKSFPVSAFEES  110 (110)
T ss_dssp             ---BEE----SSSEE-TTSSSS----TTTTSS-
T ss_pred             EEEEEE---cCCEEEEEEeeEeccCCHHHhccC
Confidence            999999   458999999999999999999986

; PDB: 1YDU_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	170
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	3e-29

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1 Length = 170

 Score =  104 bits (262), Expect = 3e-29
 Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 8/119 (6%)

Query: 34  SSSIHDLLKARGLPAGLLPKEVKSYALYE-NGTLEVELQGPCFTKYEN--RVFFESVFRA 90
              + +LLK   LP G+ P +  +Y   E    L V +   C   Y++   + F +    
Sbjct: 51  QKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTG 110

Query: 91  NLSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDC 149
           +L  G LT VEG+ + ++ IW+ V  I  D   +  + F   +  K  S   +    + 
Sbjct: 111 HLEKGKLTDVEGI-KTKVMIWVKVTSISTD---ASKVYFTAGMK-KSRSRDAYGVQRNG 164

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	170
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	100.0

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1

Probab=100.00  E-value=1.8e-41  Score=273.97  Aligned_cols=117  Identities=25%  Similarity=0.442  Sum_probs=110.3

Q ss_pred             ccchhHHHHHHhcCCCCCCCCcceeeeeecc-CceEEEEEcCeEEEEec--ceEEEeeEEEEEEecCceeccccceEEEE
Q 030847           32 AFSSSIHDLLKARGLPAGLLPKEVKSYALYE-NGTLEVELQGPCFTKYE--NRVFFESVFRANLSYGSLTGVEGLSQEEL  108 (170)
Q Consensus        32 a~~~ta~elL~e~GLP~GLLP~~V~~y~l~~-tG~f~V~L~~~C~~~~~--~~v~Y~~~ItG~i~~g~I~~L~GVkvK~l  108 (170)
                      ++.+++||+|++||||+||||.+|++|+||+ ||+|||+|+++|++.++  ++|+|+++|||+|++|+|++|+||++|+|
T Consensus        49 ~~~~ta~elL~e~gLP~GLLP~~V~~Y~l~~~tG~f~V~l~~~C~~~f~~~~~v~Y~~~VtG~l~~GkI~~L~GVk~K~L  128 (170)
T 1ydu_A           49 KMQKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTKVM  128 (170)
T ss_dssp             TTTSSCHHHHHHHSCTTCTTTSSSCEEEECTTTCSEEEECSSCEEEESTTSSEEEECSEEEEEECSSCEEEEESCEEESS
T ss_pred             cccccHHHHHHHcCCCCCcCCCCCeEEEEECCCcEEEEEeCCCEEEEecCccEEEEcCEEEEEEcCCcCccccCEEEEEE
Confidence            6778999999999999999999999999985 69999999999999997  48999999999999999999999999999


Q ss_pred             EeecceeEEEecCCCCCeEEEEEeeeeeeecccCcCCCCCCCCch
Q 030847          109 FIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQG  153 (170)
Q Consensus       109 flWv~I~eI~vd~~~~~~I~F~vG~isksFP~s~F~~~P~C~~~~  153 (170)
                       +|++|++|.|+   +++|+|++|+ +++||+++|+.+|+|...+
T Consensus       129 -lWv~V~eI~v~---~~kI~F~vGi-~ksfp~saFe~~~~c~~~~  168 (170)
T 1ydu_A          129 -IWVKVTSISTD---ASKVYFTAGM-KKSRSRDAYGVQRNGLRVD  168 (170)
T ss_dssp             -SEESCCCBEEC---SSSEECTTSS-SSCCCHHHHSSCCCCCCTT
T ss_pred             -EEeeEEEEEEe---CCEEEEEEcC-cccccHHHhcCCcCCcccC
Confidence             99999999994   5899999995 8999999999999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	170
d1ydua1	169	b.162.1.1 (A:2-170) Hypothetical protein At5g01610	4e-29

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 169

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  103 bits (258), Expect = 4e-29
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 8/118 (6%)

Query: 35  SSIHDLLKARGLPAGLLPKEVKSYALYE-NGTLEVELQGPCFTKYEN--RVFFESVFRAN 91
             + +LLK   LP G+ P +  +Y   E    L V +   C   Y++   + F +    +
Sbjct: 51  KPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGH 110

Query: 92  LSYGSLTGVEGLSQEELFIWLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDC 149
           L  G LT VEG+ + ++ IW+ V  I  D      + F   +  K  S   +    + 
Sbjct: 111 LEKGKLTDVEGI-KTKVMIWVKVTSISTDASK---VYFTAGM-KKSRSRDAYGVQRNG 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	170
d1ydua1	169	Hypothetical protein At5g01610 {Thale cress (Arabi	100.0

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-40  Score=266.76  Aligned_cols=114  Identities=25%  Similarity=0.450  Sum_probs=105.3

Q ss_pred             chhHHHHHHhcCCCCCCCCcceeeeeecc-CceEEEEEcCeEEEEec--ceEEEeeEEEEEEecCceeccccceEEEEEe
Q 030847           34 SSSIHDLLKARGLPAGLLPKEVKSYALYE-NGTLEVELQGPCFTKYE--NRVFFESVFRANLSYGSLTGVEGLSQEELFI  110 (170)
Q Consensus        34 ~~ta~elL~e~GLP~GLLP~~V~~y~l~~-tG~f~V~L~~~C~~~~~--~~v~Y~~~ItG~i~~g~I~~L~GVkvK~lfl  110 (170)
                      +.+++|||++||||+||||.+|++|+||+ ||+|||+|+++|+++++  ++|+|+++|||+|++|+|++|+|||+| +|+
T Consensus        50 ~k~l~ELL~eygLP~GLLP~~V~~Y~l~~~TG~f~V~l~~~C~~~f~~sy~v~Y~~~VtG~ls~Gki~~L~GVkvK-lfl  128 (169)
T d1ydua1          50 QKPLPELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTK-VMI  128 (169)
T ss_dssp             TSSCHHHHHHHSCTTCTTTSSSCEEEECTTTCSEEEECSSCEEEESTTSSEEEECSEEEEEECSSCEEEEESCEEE-SSS
T ss_pred             CCCHHHHHHhcCCCCccCCCCceEEEEECCCcEEEEEeCCCEEEEecCceEEEEcCEEEEEEcCCcCccccceEEE-EEE
Confidence            46899999999999999999999999986 59999999999999997  589999999999999999999999999 789


Q ss_pred             ecceeEEEecCCCCCeEEEEEeeeeeeecccCcCCCCCCCCc
Q 030847          111 WLPVKDIIVDDPTSGLILFDIVVAHKELSLSLFEDPPDCKPQ  152 (170)
Q Consensus       111 Wv~I~eI~vd~~~~~~I~F~vG~isksFP~s~F~~~P~C~~~  152 (170)
                      |++|++|.+|   +++|+|++| ++|+||+++|+.|++|...
T Consensus       129 Wv~V~eI~vd---~~kI~F~vG-I~KsfP~daFE~prdg~~v  166 (169)
T d1ydua1         129 WVKVTSISTD---ASKVYFTAG-MKKSRSRDAYGVQRNGLRV  166 (169)
T ss_dssp             EESCCCBEEC---SSSEECTTS-SSSCCCHHHHSSCCCCCCT
T ss_pred             EEEEEEEEEc---CCeEEEEec-ccccCCHHHccCCccceee
Confidence            9999999997   479999999 6999999999887766543