Citrus Sinensis ID: 030882

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Protein Sequence
MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVLCLTFW
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MNPARVTFMAATVCVMLTTHFSTQLLSEHflswkkpkeQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNIsisknivpdeikgreihhsfpmtlfqprtarlnhHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVLCLTFW
Flexible Loop (DISEMBL)
MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVLCLTFW
Low Complexity Region (SEG)
MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKaiiiiilmapiyaiDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVLCLTFW
Disordered region (IsUnstruct)
*****VTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVLCLTFW
Disordered Region (DISOPRED)
**PARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVLCLT**
Disordered Region (DISEMBL)
MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVLCLTFW
Disordered Region (DISPRO)
MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVLCLT*W
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (HMMTOP)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVLCLTFW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	170	2.2.26 [Sep-21-2011]
Q6ZMB5	413	Transmembrane protein 184	yes	no	0.770	0.317	0.340	2e-15
Q8BG09	407	Transmembrane protein 184	yes	no	0.758	0.316	0.313	7e-15
A2VDL9	407	Transmembrane protein 184	yes	no	0.758	0.316	0.321	1e-14
Q9Y519	407	Transmembrane protein 184	no	no	0.758	0.316	0.321	1e-14
Q3UFJ6	425	Transmembrane protein 184	no	no	0.811	0.324	0.321	9e-14
Q4QQS1	425	Transmembrane protein 184	no	no	0.811	0.324	0.321	2e-13
Q1RMW2	414	Transmembrane protein 184	no	no	0.770	0.316	0.303	8e-13
Q9NVA4	438	Transmembrane protein 184	no	no	0.864	0.335	0.298	5e-11
Q5RET6	438	Transmembrane protein 184	yes	no	0.864	0.335	0.298	5e-11
Q3TPR7	525	Transmembrane protein 184	no	no	0.888	0.287	0.284	1e-10

>sp|Q6ZMB5|T184A_HUMAN Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1

 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 29  HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
           H  S+  P+EQ+ II ++L+ PIYA DS++ L+   G   ++++ +SV++CYEA VI  F
Sbjct: 77  HLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLL-LLGDHQYYVYFDSVRDCYEAFVIYSF 135

Query: 89  LALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVI 148
           L+L + YL     +  +  EI+G+ I  S        R    +   L+  K  T QF ++
Sbjct: 136 LSLCFQYLG---GEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLRFCKQATLQFCLV 192

Query: 149 RPVCSILMIALQLLG 163
           +PV ++  I LQ  G
Sbjct: 193 KPVMAVTTIILQAFG 207

Homo sapiens (taxid: 9606)

>sp|Q8BG09|T184B_MOUSE Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1

 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 8/137 (5%)

Query: 29  HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
           H   + +P EQ+ I+ I+ + PIYA DS++ L+ F   + ++++  +V++CYEA VI  F
Sbjct: 68  HLRCYSRPNEQRHIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEAFVIYNF 126

Query: 89  LALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFV 146
           L+L Y YL     ++ +  EI+G+ I  S  +       +T  +    L+  K  T QF 
Sbjct: 127 LSLCYEYLG---GESAIMSEIRGKAIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFC 181

Query: 147 VIRPVCSILMIALQLLG 163
           V++P+ ++  + LQ  G
Sbjct: 182 VVKPLMAVSTVILQAFG 198

May activate the MAP kinase signaling pathway.

Mus musculus (taxid: 10090)

>sp|A2VDL9|T184B_BOVIN Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 8/137 (5%)

Query: 29  HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
           H   +  P EQ+ I+ I+ + PIYA DS++ L+ F   + ++++  +V++CYEALVI  F
Sbjct: 68  HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNF 126

Query: 89  LALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFV 146
           L+L Y YL     ++ +  EI+G+ I  S  +       +T  +    L+  K  T QF 
Sbjct: 127 LSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFC 181

Query: 147 VIRPVCSILMIALQLLG 163
           V++P+ ++  + LQ  G
Sbjct: 182 VVKPLMAVSTVVLQAFG 198

May activate the MAP kinase signaling pathway.

Bos taurus (taxid: 9913)

>sp|Q9Y519|T184B_HUMAN Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 8/137 (5%)

Query: 29  HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
           H   +  P EQ+ I+ I+ + PIYA DS++ L+ F   + ++++  +V++CYEALVI  F
Sbjct: 68  HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNF 126

Query: 89  LALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFV 146
           L+L Y YL     ++ +  EI+G+ I  S  +       +T  +    L+  K  T QF 
Sbjct: 127 LSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFC 181

Query: 147 VIRPVCSILMIALQLLG 163
           V++P+ ++  + LQ  G
Sbjct: 182 VVKPLMAVSTVVLQAFG 198

May activate the MAP kinase signaling pathway.

Homo sapiens (taxid: 9606)

>sp|Q3UFJ6|T184A_MOUSE Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1

 Score = 76.3 bits (186), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 8/146 (5%)

Query: 15  VMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLE 74
           ++LT H   Q+ S H  S+  P+EQ+ +I ++ + PIYA DS++  +   G   ++++ +
Sbjct: 70  LLLTGH---QIYS-HLRSYTAPREQRFVIRLLFIVPIYAFDSWL-SLLLLGGHPYYVYFD 124

Query: 75  SVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHT 134
           SV++CYEA VI  FL L + YL     ++ +  EI+G+ I  S        R    +   
Sbjct: 125 SVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITF 181

Query: 135 LKLLKDWTWQFVVIRPVCSILMIALQ 160
           L+  K  T QF +++PV +++ I LQ
Sbjct: 182 LRFCKQATLQFCIVKPVMALITIILQ 207

Mus musculus (taxid: 10090)

>sp|Q4QQS1|T184A_RAT Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1

 Score = 75.5 bits (184), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 81/146 (55%), Gaps = 8/146 (5%)

Query: 15  VMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLE 74
           ++LT H   Q+ S H  S+  P+EQ+ +I ++ + PIYA DS++  +   G   ++++ +
Sbjct: 70  LLLTGH---QIYS-HLRSYTVPREQRFVIRLLFIVPIYAFDSWL-SLLLLGGHPYYVYFD 124

Query: 75  SVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHT 134
           SV++CYEA VI  FL L + YL     ++ +  EI+G+ I  S        R    +   
Sbjct: 125 SVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITF 181

Query: 135 LKLLKDWTWQFVVIRPVCSILMIALQ 160
           L+  K  T QF +++PV +++ I LQ
Sbjct: 182 LRFCKQATLQFCIVKPVMALITIILQ 207

Rattus norvegicus (taxid: 10116)

>sp|Q1RMW2|T184A_BOVIN Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1

 Score = 73.2 bits (178), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 29  HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
           H  S+  P EQ+ II ++ + P+YA DS++  +   G    +++ +SV++CYEA VI  F
Sbjct: 67  HLRSYTVPHEQRYIIRLLFIVPVYAFDSWL-SLLLLGGHQHYIYFDSVRDCYEAFVIYSF 125

Query: 89  LALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVI 148
           L+L + YL     ++ +  EI+G+ +  S        R    +   L+  K  T QF ++
Sbjct: 126 LSLCFQYLG---GESAIMAEIRGKPVRTSCFHGTCCLRGMTYSIGFLRFCKQATLQFCIV 182

Query: 149 RPVCSILMIALQLLG 163
           +P+ +++ I LQ  G
Sbjct: 183 KPIMALVTIVLQAFG 197

Bos taurus (taxid: 9913)

>sp|Q9NVA4|T184C_HUMAN Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=2

 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 7/154 (4%)

Query: 11  ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
           A + ++LT   S  ++ +H + + +P+ QK II I+ M PIY++DS++ L          
Sbjct: 52  AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPGIA 107

Query: 71  MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
           +++++ +ECYEA VI  F+  L +YL       ++  E K ++ H  FP     P  A +
Sbjct: 108 IYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKH--FPPLCCCPPWA-M 164

Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
               L   K    Q+ V+RP  +I+ +  +LLG+
Sbjct: 165 GEVLLFRCKLGVLQYTVVRPFTTIVALICELLGI 198

Possible tumor suppressor which may play a role in cell growth.

Homo sapiens (taxid: 9606)

>sp|Q5RET6|T184C_PONAB Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1

 Score = 67.4 bits (163), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 7/154 (4%)

Query: 11  ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
           A + ++LT   S  ++ +H + + +P+ QK II I+ M PIY++DS++ L          
Sbjct: 52  AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPGIA 107

Query: 71  MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
           +++++ +ECYEA VI  F+  L +YL       ++  E K ++ H  FP     P  A +
Sbjct: 108 IYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKH--FPPLCCCPPWA-M 164

Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
               L   K    Q+ V+RP  +I+ +  +LLG+
Sbjct: 165 GEVLLFRCKLGVLQYTVVRPFTTIVALICELLGI 198

Possible tumor suppressor which may play a role in cell growth.

Pongo abelii (taxid: 9601)

>sp|Q3TPR7|T184C_MOUSE Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1

 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 7/158 (4%)

Query: 7   TFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGS 66
           ++  A + ++LT   S   + +H + + +P+ QK II I+ M PIY++DS+V L+     
Sbjct: 48  SWFIAGIFLLLTIPVSLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWVALV----Y 103

Query: 67  KAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPR 126
               +++++ +ECYEA VI  F+  L +YL I     I+  E K ++ +H  P+    P 
Sbjct: 104 PKIAIYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNLILHLEAKDQQ-NHILPLCCCPPW 162

Query: 127 TARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
              +    L   K    Q+ V+RP+ ++  +  ++L V
Sbjct: 163 A--MGEMLLFRCKLGVLQYTVVRPITTVTALVCEILDV 198

Possible tumor suppressor which may play a role in cell growth.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	170
295824575	311	DUF300 family protein [Nicotiana tabacum	0.964	0.527	0.804	8e-76
224123048	291	predicted protein [Populus trichocarpa]	0.964	0.563	0.859	3e-75
359496719	295	PREDICTED: transmembrane protein 184C-li	0.964	0.555	0.792	1e-73
147805940	295	hypothetical protein VITISV_038806 [Viti	0.964	0.555	0.792	7e-73
255638606	287	unknown [Glycine max]	0.964	0.571	0.774	6e-72
356543260	287	PREDICTED: transmembrane protein 184C-li	0.964	0.571	0.774	7e-72
225461334	296	PREDICTED: transmembrane protein 184C [V	0.964	0.554	0.780	7e-72
356517199	287	PREDICTED: transmembrane protein 184C-li	0.964	0.571	0.768	5e-71
255638972	229	unknown [Glycine max]	0.964	0.716	0.768	6e-71
255560832	294	conserved hypothetical protein [Ricinus	0.958	0.554	0.760	7e-71

>gi|295824575|gb|ADG37658.1| DUF300 family protein [Nicotiana tabacum]

 Score =  287 bits (735), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 132/164 (80%), Positives = 153/164 (93%)

Query: 1   MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGL 60
           ++  +VT + +T+C+MLT HFS QL++EHF+SWKKPKEQKAIIII+LMAP+YAIDS++GL
Sbjct: 23  LDRGKVTLIGSTICLMLTMHFSIQLVTEHFMSWKKPKEQKAIIIIVLMAPLYAIDSFIGL 82

Query: 61  IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
           IDF GSK FF FL+SVKECYEA+V+AKFLAL+Y+YLNISISKNIVPDEIKGR+IHHSFPM
Sbjct: 83  IDFMGSKPFFTFLDSVKECYEAIVMAKFLALMYTYLNISISKNIVPDEIKGRQIHHSFPM 142

Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
           TLFQP TA LNHHTLKLLK+WTWQFVVIRPVCSILMIALQLLGV
Sbjct: 143 TLFQPHTAHLNHHTLKLLKNWTWQFVVIRPVCSILMIALQLLGV 186

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123048|ref|XP_002330428.1| predicted protein [Populus trichocarpa] gi|222871813|gb|EEF08944.1| predicted protein [Populus trichocarpa]

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 141/164 (85%), Positives = 153/164 (93%)

Query: 1   MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGL 60
           MNP ++T +A+T CVMLT HFS QLL+EH LSWKKPKEQKAIIIIILMAPIYAIDS+VGL
Sbjct: 1   MNPGQLTLLASTFCVMLTMHFSGQLLAEHLLSWKKPKEQKAIIIIILMAPIYAIDSFVGL 60

Query: 61  IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
           +DFQGSKAFFM LESVKECYEALVIAKFLALLYSYLNISISKNIVPD+IKGREIHHSFPM
Sbjct: 61  VDFQGSKAFFMLLESVKECYEALVIAKFLALLYSYLNISISKNIVPDDIKGREIHHSFPM 120

Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
           TLFQP T RLNHHTLKLLK WTWQFVVIRP+ SILMI+LQ+LG+
Sbjct: 121 TLFQPHTVRLNHHTLKLLKYWTWQFVVIRPIFSILMISLQILGL 164

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496719|ref|XP_002268954.2| PREDICTED: transmembrane protein 184C-like [Vitis vinifera]

 Score =  280 bits (716), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 130/164 (79%), Positives = 147/164 (89%)

Query: 1   MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGL 60
           M+  ++T + +  CVML+ HF+ QL+S+H   WK PKEQKAIIII+LMAPIYA+DS+VGL
Sbjct: 6   MDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIVLMAPIYAVDSFVGL 65

Query: 61  IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
           +DFQGSKAFFM LES+KECYEALVIAKFLALLYSYLNISISKNIVPD IKGREIHHSFPM
Sbjct: 66  LDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGREIHHSFPM 125

Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
           TLFQPRT RL+HHTLKLLK WTWQFVVIRPVCSILMI LQ+LG+
Sbjct: 126 TLFQPRTVRLDHHTLKLLKYWTWQFVVIRPVCSILMITLQILGI 169

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147805940|emb|CAN61223.1| hypothetical protein VITISV_038806 [Vitis vinifera]

 Score =  278 bits (710), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 130/164 (79%), Positives = 146/164 (89%)

Query: 1   MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGL 60
           M+  ++T + +  CVML+ HF+ QL+S+H   WK PKEQKAIIII LMAPIYA+DS+VGL
Sbjct: 6   MDRGQLTLLGSAGCVMLSMHFTVQLVSQHLFYWKNPKEQKAIIIIXLMAPIYAVDSFVGL 65

Query: 61  IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
           +DFQGSKAFFM LES+KECYEALVIAKFLALLYSYLNISISKNIVPD IKGREIHHSFPM
Sbjct: 66  LDFQGSKAFFMLLESIKECYEALVIAKFLALLYSYLNISISKNIVPDGIKGREIHHSFPM 125

Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
           TLFQPRT RL+HHTLKLLK WTWQFVVIRPVCSILMI LQ+LG+
Sbjct: 126 TLFQPRTVRLDHHTLKLLKYWTWQFVVIRPVCSILMITLQILGM 169

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638606|gb|ACU19609.1| unknown [Glycine max]

 Score =  275 bits (702), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 127/164 (77%), Positives = 148/164 (90%)

Query: 1   MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGL 60
           M+PA++    +T+CVM+T HFS +LL+EH L+WKKPKEQKAI+IIILMAP+YA+DSYVGL
Sbjct: 1   MHPAQIVLYGSTLCVMITVHFSMKLLAEHVLNWKKPKEQKAIVIIILMAPLYAVDSYVGL 60

Query: 61  IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
           I+F GS+AFF FL+S+KECYEALVIAKFL L+Y+YLNIS+SKNIVPDEIKGREIHHSFPM
Sbjct: 61  INFFGSEAFFTFLDSIKECYEALVIAKFLGLMYNYLNISLSKNIVPDEIKGREIHHSFPM 120

Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
           TLFQP T RL+H TLKLLK+WTWQFVVIRPVCSILMI LQ L V
Sbjct: 121 TLFQPHTTRLDHKTLKLLKNWTWQFVVIRPVCSILMITLQYLDV 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356543260|ref|XP_003540080.1| PREDICTED: transmembrane protein 184C-like [Glycine max]

 Score =  275 bits (702), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 127/164 (77%), Positives = 148/164 (90%)

Query: 1   MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGL 60
           M+PA++    +T+CVM+T HFS +LL+EH L+WKKPKEQKAI+IIILMAP+YA+DSYVGL
Sbjct: 1   MHPAQIVLYGSTLCVMITVHFSMKLLAEHVLNWKKPKEQKAIVIIILMAPLYAVDSYVGL 60

Query: 61  IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
           I+F GS+AFF FL+S+KECYEALVIAKFL L+Y+YLNIS+SKNIVPDEIKGREIHHSFPM
Sbjct: 61  INFFGSEAFFTFLDSIKECYEALVIAKFLGLMYNYLNISLSKNIVPDEIKGREIHHSFPM 120

Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
           TLFQP T RL+H TLKLLK+WTWQFVVIRPVCSILMI LQ L V
Sbjct: 121 TLFQPHTTRLDHKTLKLLKNWTWQFVVIRPVCSILMITLQYLDV 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461334|ref|XP_002284596.1| PREDICTED: transmembrane protein 184C [Vitis vinifera]

 Score =  274 bits (701), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 128/164 (78%), Positives = 145/164 (88%)

Query: 1   MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGL 60
           MNP ++T + ++ CVMLT HF+ QLL EH   WKKPKEQKAI+III MAP+YAI S+VGL
Sbjct: 7   MNPGQLTLLGSSFCVMLTMHFTVQLLWEHSFYWKKPKEQKAILIIIFMAPVYAIVSFVGL 66

Query: 61  IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
           +DFQGSKAFFM LES+KECYEALVIAKFLAL+YSYLNISISKNIVPDEIKGR+IHHSFPM
Sbjct: 67  LDFQGSKAFFMLLESIKECYEALVIAKFLALMYSYLNISISKNIVPDEIKGRQIHHSFPM 126

Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
           TLFQP T  LNHHTLKLLK WTWQFV++RPVCSILMI LQ+L +
Sbjct: 127 TLFQPHTVHLNHHTLKLLKYWTWQFVIVRPVCSILMITLQVLRI 170

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356517199|ref|XP_003527276.1| PREDICTED: transmembrane protein 184C-like [Glycine max]

 Score =  271 bits (694), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 126/164 (76%), Positives = 147/164 (89%)

Query: 1   MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGL 60
           M+PA++    +T+CVM+T HFS +LL+EH L+WKKPKEQ AI+IIILMAP+YA+DSYVGL
Sbjct: 1   MHPAQIVLYGSTLCVMITVHFSMKLLAEHVLNWKKPKEQNAIVIIILMAPLYAVDSYVGL 60

Query: 61  IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
           I+F GS+AFF FL+S+KECYEALVIAKFL L+YS+LNIS+SKNIVPDEIKGREIHHSFPM
Sbjct: 61  INFFGSEAFFTFLDSIKECYEALVIAKFLGLMYSFLNISLSKNIVPDEIKGREIHHSFPM 120

Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
           TLFQP T RL+H TLKLLK+WTWQFVVIRPVCSILMI LQ L V
Sbjct: 121 TLFQPHTTRLDHKTLKLLKNWTWQFVVIRPVCSILMITLQYLEV 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638972|gb|ACU19787.1| unknown [Glycine max]

 Score =  271 bits (694), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 126/164 (76%), Positives = 147/164 (89%)

Query: 1   MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGL 60
           M+PA++    +T+CVM+T HFS +LL+EH L+WKKPKEQ AI+IIILMAP+YA+DSYVGL
Sbjct: 1   MHPAQIVLYGSTLCVMITVHFSMKLLAEHVLNWKKPKEQNAIVIIILMAPLYAVDSYVGL 60

Query: 61  IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
           I+F GS+AFF FL+S+KECYEALVIAKFL L+YS+LNIS+SKNIVPDEIKGREIHHSFPM
Sbjct: 61  INFFGSEAFFTFLDSIKECYEALVIAKFLGLMYSFLNISLSKNIVPDEIKGREIHHSFPM 120

Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
           TLFQP T RL+H TLKLLK+WTWQFVVIRPVCSILMI LQ L V
Sbjct: 121 TLFQPHTTRLDHKTLKLLKNWTWQFVVIRPVCSILMITLQYLEV 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560832|ref|XP_002521429.1| conserved hypothetical protein [Ricinus communis] gi|223539328|gb|EEF40919.1| conserved hypothetical protein [Ricinus communis]

 Score =  271 bits (693), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 124/163 (76%), Positives = 144/163 (88%)

Query: 1   MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGL 60
           +N  ++T M +  C ML+ HF+ QLLS+H   WK PKEQKAI+IIILMAPIYAIDS+VGL
Sbjct: 6   LNRGQLTLMGSAFCTMLSMHFTVQLLSQHLFYWKNPKEQKAILIIILMAPIYAIDSFVGL 65

Query: 61  IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
           +D +GSKAFFMFL+S+KECYEALVIAKFLAL+YSYLNISISKNIVPDEIKGREIHHSFPM
Sbjct: 66  LDIRGSKAFFMFLDSIKECYEALVIAKFLALMYSYLNISISKNIVPDEIKGREIHHSFPM 125

Query: 121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLG 163
           TLFQP T RL+H TL+LLK WTWQFV+IRP+CS+LMI LQ+LG
Sbjct: 126 TLFQPHTVRLDHRTLRLLKYWTWQFVIIRPICSVLMITLQILG 168

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	170
TAIR|locus:2119672	294	AT4G21570 "AT4G21570" [Arabido	0.958	0.554	0.644	6.1e-55
TAIR|locus:2202104	295	AT1G11200 "AT1G11200" [Arabido	0.964	0.555	0.615	8.9e-54
ZFIN|ZDB-GENE-050417-219	416	zgc:112178 "zgc:112178" [Danio	0.817	0.334	0.284	3e-11
UNIPROTKB|F1P1L2	422	TMEM184A "Uncharacterized prot	0.758	0.305	0.291	6.5e-11
MGI|MGI:2385897	425	Tmem184a "transmembrane protei	0.811	0.324	0.294	6.5e-11
RGD|1306702	425	Tmem184a "transmembrane protei	0.811	0.324	0.294	8.4e-11
FB|FBgn0035236	486	CG12004 [Drosophila melanogast	0.864	0.302	0.270	1.1e-10
UNIPROTKB|F1RIV1	423	TMEM184A "Uncharacterized prot	0.770	0.309	0.296	2.3e-10
UNIPROTKB|E2R3P6	424	TMEM184A "Uncharacterized prot	0.817	0.327	0.278	2.3e-10
UNIPROTKB|Q6ZMB5	413	TMEM184A "Transmembrane protei	0.770	0.317	0.288	3.6e-10

TAIR|locus:2119672 AT4G21570 "AT4G21570" [Arabidopsis thaliana (taxid:3702)]

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 105/163 (64%), Positives = 126/163 (77%)

Query:     1 MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGL 60
             + P ++TF  +   V+LT HF+ QL+S+H   WK PKEQK               S++GL
Sbjct:     7 LKPPQITFYCSAFSVLLTLHFTIQLVSQHLFHWKNPKEQKAILIIVLMAPIYAVVSFIGL 66

Query:    61 IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
             ++ +GS+ FF+FLES+KECYEALVIAKFLAL+YSYLNIS+SKNI+PD IKGREIHHSFPM
Sbjct:    67 LEVKGSETFFLFLESIKECYEALVIAKFLALMYSYLNISMSKNILPDGIKGREIHHSFPM 126

Query:   121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLG 163
             TLFQP   RL+ HTLKLLK WTWQFVVIRPVCS LMIALQL+G
Sbjct:   127 TLFQPHVVRLDRHTLKLLKYWTWQFVVIRPVCSTLMIALQLIG 169

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2202104 AT1G11200 "AT1G11200" [Arabidopsis thaliana (taxid:3702)]

 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 101/164 (61%), Positives = 126/164 (76%)

Query:     1 MNPARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGL 60
             ++PA +T M +  CV+L+ HF+ QL+S+H   WKKP EQ+              +S+VGL
Sbjct:     7 LSPAEITVMGSVFCVLLSMHFTMQLVSQHLFYWKKPNEQRAILIIVLMAPVYAINSFVGL 66

Query:    61 IDFQGSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPM 120
             +D +GSK FFMFL++VKECYEALVIAKFLAL+YSY+NIS+S  I+PDE KGREIHHSFPM
Sbjct:    67 LDAKGSKPFFMFLDAVKECYEALVIAKFLALMYSYVNISMSARIIPDEFKGREIHHSFPM 126

Query:   121 TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGV 164
             TLF PRT  L++ TLK LK WTWQF +IRPVCSILMI LQ+LG+
Sbjct:   127 TLFVPRTTHLDYLTLKQLKQWTWQFCIIRPVCSILMITLQILGI 170

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-050417-219 zgc:112178 "zgc:112178" [Danio rerio (taxid:7955)]

 Score = 162 (62.1 bits), Expect = 3.0e-11, P = 3.0e-11
 Identities = 43/151 (28%), Positives = 76/151 (50%)

Query:    15 VMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLE 74
             ++LT H   Q+   H   +  PKEQ+              DS++ L+ F   + ++++ +
Sbjct:    71 LLLTCH---QIYM-HLRYYSSPKEQRHIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFD 125

Query:    75 SVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNH 132
             +V++CYEA VI  FL+L Y YL     ++ +  EI+G+ I  S  +       +T  +  
Sbjct:   126 TVRDCYEAFVIYNFLSLCYEYLG---GESAIMAEIRGKPIESSCIYGTCCLWGKTYSIGF 182

Query:   133 HTLKLLKDWTWQFVVIRPVCSILMIALQLLG 163
               L+  K  T QF V++P+ +I+ + LQ  G
Sbjct:   183 --LRFCKQATLQFCVVKPLMAIITVILQAFG 211

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1P1L2 TMEM184A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 159 (61.0 bits), Expect = 6.5e-11, P = 6.5e-11
 Identities = 40/137 (29%), Positives = 70/137 (51%)

Query:    29 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
             H  ++  PKEQ+              DS++ L+   GS  ++++ +SV++CYEA VI  F
Sbjct:    80 HLRNYTIPKEQRYIIRILFIVPIYAFDSWLSLL-LLGSHQYYVYFDSVRDCYEAFVIYSF 138

Query:    89 LALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFV 146
             L+L + YL     ++ +  EI+G+ I  S  +     Q  +  +    L+  K  T QF 
Sbjct:   139 LSLCFEYLG---GESTIMTEIRGKPIASSCLYGTCCLQGMSYSIGF--LRFCKQATLQFC 193

Query:   147 VIRPVCSILMIALQLLG 163
             +++P+ +I+ I LQ  G
Sbjct:   194 IVKPLMAIVTIILQAFG 210

GO:0018992 "germ-line sex determination" evidence=IEA

GO:0031901 "early endosome membrane" evidence=IEA

GO:0032880 "regulation of protein localization" evidence=IEA

GO:0051046 "regulation of secretion" evidence=IEA

MGI|MGI:2385897 Tmem184a "transmembrane protein 184a" [Mus musculus (taxid:10090)]

 Score = 159 (61.0 bits), Expect = 6.5e-11, P = 6.5e-11
 Identities = 43/146 (29%), Positives = 73/146 (50%)

Query:    15 VMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLE 74
             ++LT H   Q+ S H  S+  P+EQ+              DS++ L+   G   ++++ +
Sbjct:    70 LLLTGH---QIYS-HLRSYTAPREQRFVIRLLFIVPIYAFDSWLSLL-LLGGHPYYVYFD 124

Query:    75 SVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHT 134
             SV++CYEA VI  FL L + YL     ++ +  EI+G+ I  S        R    +   
Sbjct:   125 SVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITF 181

Query:   135 LKLLKDWTWQFVVIRPVCSILMIALQ 160
             L+  K  T QF +++PV +++ I LQ
Sbjct:   182 LRFCKQATLQFCIVKPVMALITIILQ 207

GO:0005768 "endosome" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0018992 "germ-line sex determination" evidence=IMP

GO:0031901 "early endosome membrane" evidence=IDA

GO:0032880 "regulation of protein localization" evidence=IMP

GO:0051046 "regulation of secretion" evidence=IMP

RGD|1306702 Tmem184a "transmembrane protein 184A" [Rattus norvegicus (taxid:10116)]

 Score = 158 (60.7 bits), Expect = 8.4e-11, P = 8.4e-11
 Identities = 43/146 (29%), Positives = 73/146 (50%)

Query:    15 VMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLE 74
             ++LT H   Q+ S H  S+  P+EQ+              DS++ L+   G   ++++ +
Sbjct:    70 LLLTGH---QIYS-HLRSYTVPREQRFVIRLLFIVPIYAFDSWLSLL-LLGGHPYYVYFD 124

Query:    75 SVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHT 134
             SV++CYEA VI  FL L + YL     ++ +  EI+G+ I  S        R    +   
Sbjct:   125 SVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSITF 181

Query:   135 LKLLKDWTWQFVVIRPVCSILMIALQ 160
             L+  K  T QF +++PV +++ I LQ
Sbjct:   182 LRFCKQATLQFCIVKPVMALITIILQ 207

GO:0005768 "endosome" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0018992 "germ-line sex determination" evidence=IEA;ISO

GO:0031901 "early endosome membrane" evidence=IEA;ISO

GO:0032880 "regulation of protein localization" evidence=IEA;ISO

GO:0051046 "regulation of secretion" evidence=IEA;ISO

FB|FBgn0035236 CG12004 [Drosophila melanogaster (taxid:7227)]

 Score = 158 (60.7 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 42/155 (27%), Positives = 72/155 (46%)

Query:    11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFF 70
             A VCV      + Q + +H   +  P+EQ+               S++ L+ F     + 
Sbjct:    70 AGVCVWAALFITCQQIYQHLRWYTNPQEQRWIVRILFIVPIYATYSWISLLFFNSDNVYI 129

Query:    71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTA 128
              F  +V++CYEA VI  FL+L Y YL     +  +  EI+G+ I  S  +     + +T 
Sbjct:   130 YFF-TVRDCYEAFVIYNFLSLCYEYLG---GEGNIMSEIRGKPIKTSCLYGTCCLKGKTY 185

Query:   129 RLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLG 163
              +    L+  K  T QF +++P+ + ++I LQ  G
Sbjct:   186 TIGF--LRFCKQATLQFCLVKPLVAFIIIFLQAFG 218

GO:0030246 "carbohydrate binding" evidence=ISS

GO:0008039 "synaptic target recognition" evidence=IMP

UNIPROTKB|F1RIV1 TMEM184A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 154 (59.3 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 40/135 (29%), Positives = 64/135 (47%)

Query:    29 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
             H  S+  P EQ+              DS++ L+   G   ++++ +SV++CYEA VI  F
Sbjct:    77 HLRSYTVPNEQRYIIRLLLIVPVYAFDSWLSLL-LLGGHQYYVYFDSVRDCYEAFVIYSF 135

Query:    89 LALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVI 148
             L+L + YL     ++ +  EI+G+ I  S        R    +   L+  K  T QF V+
Sbjct:   136 LSLCFQYLG---GESAIMAEIRGKPIRSSCVYGTCCLRGMSYSIGFLRFCKQATLQFCVV 192

Query:   149 RPVCSILMIALQLLG 163
             +PV +   I LQ  G
Sbjct:   193 KPVMAAATIVLQAFG 207

GO:0051046 "regulation of secretion" evidence=IEA

GO:0032880 "regulation of protein localization" evidence=IEA

GO:0031901 "early endosome membrane" evidence=IEA

GO:0018992 "germ-line sex determination" evidence=IEA

UNIPROTKB|E2R3P6 TMEM184A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 154 (59.3 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 42/151 (27%), Positives = 74/151 (49%)

Query:    15 VMLTTHFSTQLLSEHFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLE 74
             ++LT H   Q+   H  S+  P EQ+              DS++ L+   G    +++ +
Sbjct:    76 LLLTCH---QIYL-HLRSYTVPNEQRYIIRLLFIVPIYAFDSWLSLL-LLGGHQHYIYFD 130

Query:    75 SVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNH 132
             SV++CYEA VI  FL+L + YL     ++ +  EI+G+ I  S  +     Q  +  +  
Sbjct:   131 SVRDCYEAFVIYSFLSLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLQGMSYSIGF 187

Query:   133 HTLKLLKDWTWQFVVIRPVCSILMIALQLLG 163
               L+  K  T QF +++P+ +++ I LQ  G
Sbjct:   188 --LRFCKQATLQFCIVKPIMALITIVLQAFG 216

GO:0051046 "regulation of secretion" evidence=IEA

GO:0032880 "regulation of protein localization" evidence=IEA

GO:0031901 "early endosome membrane" evidence=IEA

GO:0018992 "germ-line sex determination" evidence=IEA

UNIPROTKB|Q6ZMB5 TMEM184A "Transmembrane protein 184A" [Homo sapiens (taxid:9606)]

 Score = 152 (58.6 bits), Expect = 3.6e-10, P = 3.6e-10
 Identities = 39/135 (28%), Positives = 65/135 (48%)

Query:    29 HFLSWKKPKEQKXXXXXXXXXXXXXXDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
             H  S+  P+EQ+              DS++ L+   G   ++++ +SV++CYEA VI  F
Sbjct:    77 HLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLL-LLGDHQYYVYFDSVRDCYEAFVIYSF 135

Query:    89 LALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVI 148
             L+L + YL     +  +  EI+G+ I  S        R    +   L+  K  T QF ++
Sbjct:   136 LSLCFQYLG---GEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLRFCKQATLQFCLV 192

Query:   149 RPVCSILMIALQLLG 163
             +PV ++  I LQ  G
Sbjct:   193 KPVMAVTTIILQAFG 207

GO:0016021 "integral to membrane" evidence=IEA

GO:0018992 "germ-line sex determination" evidence=IEA

GO:0031901 "early endosome membrane" evidence=IEA

GO:0032880 "regulation of protein localization" evidence=IEA

GO:0051046 "regulation of secretion" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_scaffold_134000060 hypothetical protein (291 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	170
pfam03619	272	pfam03619, Solute_trans_a, Organic solute transpor	6e-48

>gnl|CDD|217643 pfam03619, Solute_trans_a, Organic solute transporter Ostalpha

 Score =  156 bits (396), Expect = 6e-48
 Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 7/163 (4%)

Query: 5   RVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQ 64
               + A + V+L    S  L+ +H  ++ KP+EQ+ II I+LM PIYA+ S++ L+  +
Sbjct: 2   TWAILIAGLFVLLALLISLFLILQHLTNYTKPEEQRLIIRILLMVPIYAVISFLSLLFPK 61

Query: 65  GSKAFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMT-LF 123
            +    ++ + +++CYEA VI  F +LL +YL     +NI+        I H FP+    
Sbjct: 62  AA----IYFDLIRDCYEAFVIYTFFSLLIAYLG--GERNIIRLLEGKPPIRHPFPLLTKC 115

Query: 124 QPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGVLC 166
             RT R +       K    Q+VV++P+C+IL I LQ  GV  
Sbjct: 116 LLRTDRSDPTFFLRCKRGVLQYVVVKPLCAILAIILQAFGVYG 158

This family is a transmembrane organic solute transport protein. In vertebrates these proteins form a complex with Ostbeta, and function as bile transporters. In plants they may transport brassinosteroid-like compounds and act as regulators of cell death. Length = 272

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	170
PF03619	274	Solute_trans_a: Organic solute transporter Ostalph	100.0
KOG2641	386	consensus Predicted seven transmembrane receptor -	100.0

>PF03619 Solute_trans_a: Organic solute transporter Ostalpha; InterPro: IPR005178 This is a family of mainly hypothetical proteins of no known function

Probab=100.00  E-value=8.3e-51  Score=339.42  Aligned_cols=160  Identities=32%  Similarity=0.535  Sum_probs=146.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Q 030882            4 ARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEAL   83 (170)
Q Consensus         4 ~~~~~~iag~~~~la~~iS~~~I~~Hl~~y~~P~~Qr~IiRIl~mvPiYai~S~lsl~~~~~s~~~~~y~~~ird~YEA~   83 (170)
                      |+++|++||+|+++|+.+|+++|.+|++||++|++||+|+||++|+|+||++||+|+++||++    +|+|++||+|||+
T Consensus         1 ~~~~~~ia~~~~~~~~~is~~~i~~hl~~y~~P~~Qr~iirIl~m~Piyai~S~~sl~~p~~~----~~~~~ir~~Yea~   76 (274)
T PF03619_consen    1 HTWAWIIAGIFALLTILISLFLIYQHLRNYSKPEEQRYIIRILLMVPIYAICSLLSLLFPRAA----IYLDFIRDCYEAF   76 (274)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999999999999999999999986    7999999999999


Q ss_pred             HHHHHHHHHHHHhccccccccccchhcC-CccccCCcc--cccCCccccCChhHHHHhhHhhcchhchhHHHHHHHHHHH
Q 030882           84 VIAKFLALLYSYLNISISKNIVPDEIKG-REIHHSFPM--TLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQ  160 (170)
Q Consensus        84 viy~F~~Ll~~ylgg~~~~~~~~~~~~~-~~~~~~~P~--~~~~~~~~~~~~~~l~~~k~~vlQy~ivkpi~~i~~iil~  160 (170)
                      ++|+|+.|+++|+|||++   ..+.+++ ++.+|+||+  +||+.++++.|++++|+||+||+||+++||++++++++++
T Consensus        77 ~ly~F~~Ll~~y~gg~~~---~~~~l~~~~~~~~~~P~~~~~~c~~~~~~~~~~l~~~k~~VlQ~~vvrpl~~~i~iil~  153 (274)
T PF03619_consen   77 VLYSFFSLLLNYLGGEEA---LVEVLSGKPPIKHPWPCCCCCCCLPPWPMTKRFLRRCKWGVLQYVVVRPLLSIISIILE  153 (274)
T ss_pred             HHHHHHHHHHHHhCCHHH---HHHHhhcCCCCCCCCcccccccCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999742   3344444 457899998  3344457889999999999999999999999999999999


Q ss_pred             HhCCCCCCCC
Q 030882          161 LLGVLCLTFW  170 (170)
Q Consensus       161 ~~G~yc~~s~  170 (170)
                      .+|.||||++
T Consensus       154 ~~g~y~~~~~  163 (274)
T PF03619_consen  154 AFGVYCEGSF  163 (274)
T ss_pred             HHHHhccCCC
Confidence            9999999985

>KOG2641 consensus Predicted seven transmembrane receptor - rhodopsin family [Signal transduction mechanisms]

Probab=100.00  E-value=1e-45  Score=319.07  Aligned_cols=161  Identities=31%  Similarity=0.560  Sum_probs=147.6

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHH
Q 030882            3 PARVTFMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEA   82 (170)
Q Consensus         3 ~~~~~~~iag~~~~la~~iS~~~I~~Hl~~y~~P~~Qr~IiRIl~mvPiYai~S~lsl~~~~~s~~~~~y~~~ird~YEA   82 (170)
                      +|.++..+|+.|+.+++.+|+++|++|++||+||++||+|+||++|+||||+.||+|+..|+.+    +|+|.+||||||
T Consensus        32 ~~~~~~~~a~~f~vit~~ls~~~I~~HL~~y~~P~~qr~iv~il~mvPIys~~S~vsl~~p~~~----~~~~~vr~~Yea  107 (386)
T KOG2641|consen   32 LLTVALAIASFFVVITILLSLFHIYQHLRYYSNPREQRPIVRILFMVPIYSVASFVSLLVPRVA----FYLDTVRECYEA  107 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhchhhhhhhhhHHHHHHHHHHHhccchh----hhHHHHHHHHHH
Confidence            5788999999999999999999999999999999999999999999999999999999999953    799999999999


Q ss_pred             HHHHHHHHHHHHHhccccccccccchhcCCc--cccCCcccccCCccccCChhHHHHhhHhhcchhchhHHHHHHHHHHH
Q 030882           83 LVIAKFLALLYSYLNISISKNIVPDEIKGRE--IHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQ  160 (170)
Q Consensus        83 ~viy~F~~Ll~~ylgg~~~~~~~~~~~~~~~--~~~~~P~~~~~~~~~~~~~~~l~~~k~~vlQy~ivkpi~~i~~iil~  160 (170)
                      ||+|+|++||.+|+|||.  + +..++++++  .+|++|+||+.|....++++++|+||+||+||+++||++++++++++
T Consensus       108 f~ly~F~sLl~~ylGGe~--~-~v~~l~~~~~~~~~~~P~cc~~~p~~~~~~~~lr~~K~~vlQ~~ivkp~~~lv~lvl~  184 (386)
T KOG2641|consen  108 FVLYVFLSLLFHYLGGEQ--N-IVTELEGRLIRVNHTPPFCCFFPPTVRLTPKFLRRCKQGVLQYPIVKPFLALVTLVLY  184 (386)
T ss_pred             HHHHHHHHHHHHHcCChH--H-HHHHHhccCCcccCCCCceeccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999973  3 334455543  57999999988856669999999999999999999999999999999


Q ss_pred             HhCCCCCCCC
Q 030882          161 LLGVLCLTFW  170 (170)
Q Consensus       161 ~~G~yc~~s~  170 (170)
                      ++|+|++|+|
T Consensus       185 ~~g~y~~g~~  194 (386)
T KOG2641|consen  185 AFGVYDDGDF  194 (386)
T ss_pred             HhcccccCCc
Confidence            9999999975

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00