Citrus Sinensis ID: 031014

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccccccEEEcccccccHHHHHHHccccccccccccccccccEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHHHccccccccccccEEEEEEcccccEEEEccccccccccccccccccccccccccccEEEcccccccccc
Coil and Loop (DISEMBL)
mdrvrrpdrsdvhlsreeEAKMEDEVRENfenlapkrhtkpqrsdyssqyvdafangsdsnqeySQFQHLqandsqqkliwngsevteefqeteyykdlnrinkdhhttgtgfikmenangksfilapdnddahhssckgnpatnewipsaddsvvfssdkpkrsen
Flexible Loop (DISEMBL)
mdrvrrpdrsdvhlsreeeakmedevrenfenlapkrhtkpqrsdyssQYVDAFANGSDSNQEYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPatnewipsaddsvvfssdkpkrsen
Low Complexity Region (SEG)
MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN
Disordered region (IsUnstruct)
******************************************************************************LIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMEN*****FI******************************************
Disordered Region (DISOPRED)
***********************DEVRENFENLA***************************QEY**FQ*******************EEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILA************GNPATNEWIPSADDSV************
Disordered Region (DISEMBL)
*************LSREEEAKMEDEVRENFENLAPK**********SSQYVDAFANGSDSNQEYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSV************
Disordered Region (DISPRO)
***********************DEVRENFENLAPK**********************DSNQEYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDND**HHSSCKGNPATNEWIPSADDSVVFS*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
255558834	166	conserved hypothetical protein [Ricinus	0.988	0.993	0.613	2e-53
356566203	169	PREDICTED: uncharacterized protein LOC10	0.994	0.982	0.588	3e-51
300432698	169	conserved hypothetical protein 9 [Hevea	0.958	0.946	0.632	1e-50
300432702	169	conserved hypothetical protein 11 [Hevea	0.958	0.946	0.620	2e-50
388511711	167	unknown [Lotus japonicus]	0.988	0.988	0.585	8e-48
351734542	171	uncharacterized protein LOC100306349 [Gl	0.994	0.970	0.563	2e-47
225434704	166	PREDICTED: uncharacterized protein LOC10	0.988	0.993	0.619	6e-46
300432700	166	conserved hypothetical protein 10 [Hevea	0.916	0.921	0.616	1e-45
217070972	166	unknown [Medicago truncatula]	0.976	0.981	0.576	4e-44
224106331	168	predicted protein [Populus trichocarpa]	0.988	0.982	0.588	5e-44

>gi|255558834|ref|XP_002520440.1| conserved hypothetical protein [Ricinus communis] gi|223540282|gb|EEF41853.1| conserved hypothetical protein [Ricinus communis]

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 103/168 (61%), Positives = 128/168 (76%), Gaps = 3/168 (1%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+  RRP+RSD+H++ EEE ++E E R++F+ LAPKRHTKPQRS+YSSQY DA       
Sbjct: 1   MECYRRPNRSDIHMTMEEEVRIEAETRDHFDGLAPKRHTKPQRSEYSSQYADANPLHPTF 60

Query: 61  NQEYSQFQHLQANDSQQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENA 119
             E+ +FQ LQ +   QKL +NG  E  +EF ETEYY+DLN I+K HHTTGTGFIKMENA
Sbjct: 61  TPEFLEFQRLQTD--PQKLRYNGKGEAGQEFAETEYYEDLNCIDKQHHTTGTGFIKMENA 118

Query: 120 NGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 167
           NGK F LAPD+    H+SCKGNPATN+WIP+A D+  F+SDKPKRS+N
Sbjct: 119 NGKGFTLAPDSVTCCHASCKGNPATNDWIPAAADTATFASDKPKRSDN 166

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566203|ref|XP_003551324.1| PREDICTED: uncharacterized protein LOC100811254 [Glycine max]

 Score =  206 bits (523), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 100/170 (58%), Positives = 128/170 (75%), Gaps = 4/170 (2%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+   RP+RSD+HLS EEEA +E + RE F+ +AP+RHTKPQRSDYS+QYVDAF+N   S
Sbjct: 1   MECYTRPNRSDIHLSAEEEATIEAKTREYFDGVAPQRHTKPQRSDYSAQYVDAFSNAHHS 60

Query: 61  N---QEYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKME 117
           +    E +QFQ LQ +  ++KL++NGS+V EEF ETEYY+DLN ++K HHTTGTGFIK+E
Sbjct: 61  SLTIPELTQFQLLQNDPQEKKLVYNGSQVPEEFVETEYYQDLNSVDKHHHTTGTGFIKVE 120

Query: 118 NANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 167
             NG  F + PDND   H SCKGNPATN+W+P+    V F+S KP RS+N
Sbjct: 121 K-NGNDFHIEPDNDTGCHHSCKGNPATNDWVPAPSTEVGFNSGKPNRSDN 169

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300432698|gb|ADK13066.1| conserved hypothetical protein 9 [Hevea brasiliensis]

 Score =  204 bits (518), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 129/166 (77%), Gaps = 6/166 (3%)

Query: 6   RPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDA--FANGSDSN-Q 62
           RP RSD+HLS EEEAK+++E +E F+ LA KRH+KPQRS++S+QYVDA  F N   S+  
Sbjct: 6   RPHRSDIHLSAEEEAKIQEETKEYFDGLAAKRHSKPQRSEFSAQYVDALPFTNSLPSSIP 65

Query: 63  EYSQFQHLQANDSQQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANG 121
           E  +FQ L+ ND Q KL+ NG  +V E+F ETEYYKDLN I+K HHTTGTGFIKMEN NG
Sbjct: 66  ELVKFQRLE-NDPQ-KLVCNGNGQVGEDFVETEYYKDLNCIDKKHHTTGTGFIKMENING 123

Query: 122 KSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 167
           KSF LAPD     H+SC+GNPATNEWIP+A ++V  +SDKPKRS+N
Sbjct: 124 KSFSLAPDPVSCCHASCRGNPATNEWIPAAANTVTLASDKPKRSDN 169

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300432702|gb|ADK13068.1| conserved hypothetical protein 11 [Hevea brasiliensis]

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 103/166 (62%), Positives = 128/166 (77%), Gaps = 6/166 (3%)

Query: 6   RPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFA---NGSDSNQ 62
           RP RSD+HL+ EEEAK+++E +E F+ LA KRH+KPQRS++S+QYVDAF    +   S  
Sbjct: 6   RPHRSDIHLAAEEEAKIQEETKEYFDGLAAKRHSKPQRSEFSAQYVDAFPFTNSLPSSIP 65

Query: 63  EYSQFQHLQANDSQQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENANG 121
           E  +FQ L+ ND Q KL+ NG  +V E+F ETEYYKDLN I+K HHTTGTGFIKMEN NG
Sbjct: 66  ELVEFQRLE-NDPQ-KLVCNGNGQVGEDFVETEYYKDLNCIDKKHHTTGTGFIKMENING 123

Query: 122 KSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 167
           KSF LAPD     H+SC+GNPATNEWIP+A ++V  +SDKPKRS+N
Sbjct: 124 KSFSLAPDPVSCCHASCRGNPATNEWIPAAANTVTLASDKPKRSDN 169

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511711|gb|AFK43917.1| unknown [Lotus japonicus]

 Score =  194 bits (494), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 99/169 (58%), Positives = 124/169 (73%), Gaps = 4/169 (2%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANG--S 58
           M+   RP+RSD HLS EEEA +E + RE FE  APKRHTKPQRS+YSSQYVD   NG  +
Sbjct: 1   MECCGRPNRSDSHLSAEEEATIEAQTREYFEEGAPKRHTKPQRSEYSSQYVDNI-NGVSN 59

Query: 59  DSNQEYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMEN 118
           DS  E  QFQ L+ +  ++KL++NG++V EEF ETEYYKDLN ++K HHTTG GFI+++ 
Sbjct: 60  DSTPEMLQFQRLENDPQEKKLVYNGNQVAEEFVETEYYKDLNNVDKHHHTTGKGFIQVDK 119

Query: 119 ANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 167
           + G  F + PDND  HH S KGNPATNEW+P+     VF+SDKP RS+N
Sbjct: 120 S-GTGFHIEPDNDTGHHHSSKGNPATNEWVPAPSTEDVFNSDKPSRSDN 167

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351734542|ref|NP_001237416.1| uncharacterized protein LOC100306349 [Glycine max] gi|255628273|gb|ACU14481.1| unknown [Glycine max]

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/172 (56%), Positives = 127/172 (73%), Gaps = 6/172 (3%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+   RP+RSD+HLS EEEA +E + R+ F+ +AP+RHTKPQRS+YS+Q VDAF+N   S
Sbjct: 1   MEFYTRPNRSDIHLSAEEEATIEAKTRDYFDGVAPQRHTKPQRSEYSAQNVDAFSNAHHS 60

Query: 61  NQ-----EYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIK 115
           +      E+ QFQ L+ +  ++KL +NGS+V EEF ETEYY+DLN ++K HHTTGTGFIK
Sbjct: 61  SSSSSIPEFMQFQRLENDPQEKKLEYNGSQVPEEFVETEYYQDLNSVDKHHHTTGTGFIK 120

Query: 116 MENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 167
           +E  NG  F + PDND   H SCK NPATN+W+PS  + V F+SDKP RS+N
Sbjct: 121 VE-KNGNDFHIEPDNDTGCHHSCKCNPATNDWVPSPSNEVGFNSDKPNRSDN 171

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434704|ref|XP_002280988.1| PREDICTED: uncharacterized protein LOC100258718 [Vitis vinifera] gi|297745958|emb|CBI16014.3| unnamed protein product [Vitis vinifera]

 Score =  188 bits (478), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 104/168 (61%), Positives = 133/168 (79%), Gaps = 3/168 (1%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+   RP+RSDVHL++EE A++E+E R+ F+ +APKRH KP RS++SSQYVD  ++    
Sbjct: 1   MECCGRPNRSDVHLTQEEAARIEEETRDYFDGIAPKRHAKPSRSEHSSQYVDPPSDRQHE 60

Query: 61  N-QEYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENA 119
           +  E+ +FQHL+ ND Q KL+++GSEVTEEF ETEYY+DLN I+K HHTTGTGFIKMENA
Sbjct: 61  DIPEFLKFQHLE-NDPQ-KLVYSGSEVTEEFVETEYYQDLNCIDKQHHTTGTGFIKMENA 118

Query: 120 NGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 167
           +GKSF LA ++     +SCKGNPATN+WIP+A D V FSSDKP RSEN
Sbjct: 119 DGKSFNLAANSATCCQASCKGNPATNDWIPAAADKVAFSSDKPNRSEN 166

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300432700|gb|ADK13067.1| conserved hypothetical protein 10 [Hevea brasiliensis]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/159 (61%), Positives = 121/159 (76%), Gaps = 6/159 (3%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDA--FANGS 58
           M+   RP RSD+HLS EEEAK+++E +E F+ LA KRH+KPQRS++S+QYVDA  F N  
Sbjct: 1   MEFHGRPHRSDIHLSAEEEAKIQEETKEYFDGLAAKRHSKPQRSEFSAQYVDALPFTNSL 60

Query: 59  DSN-QEYSQFQHLQANDSQQKLIWNG-SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKM 116
            S+  E  +FQ L+ ND Q KL+ NG  +V E+F ETEYYKDLN I+K HHTTGTGFIKM
Sbjct: 61  PSSIPELVKFQRLE-NDPQ-KLVCNGNGQVGEDFVETEYYKDLNCIDKKHHTTGTGFIKM 118

Query: 117 ENANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSV 155
           EN NGKSF LAPD     H+SC+GNPATNEWIP+A ++V
Sbjct: 119 ENINGKSFSLAPDPVSCCHASCRGNPATNEWIPAAANTV 157

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217070972|gb|ACJ83846.1| unknown [Medicago truncatula]

 Score =  182 bits (462), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/170 (57%), Positives = 130/170 (76%), Gaps = 7/170 (4%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSD- 59
           M+ VRRP+RSD HLS EEEA +E + R +FE +APKRHTKPQRS+Y+SQYVD+  N SD 
Sbjct: 1   MEDVRRPNRSDTHLSAEEEASIEAKTRHHFEEVAPKRHTKPQRSEYASQYVDS--NVSDN 58

Query: 60  SNQEYSQFQHLQANDSQQKLIWNGSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKMENA 119
           S  E  QFQ L+ +  ++KL+++G+EV+EEF ETEYYKDLN ++K HHTTG GFI++E +
Sbjct: 59  SVPEMLQFQRLENDPQEKKLVYDGNEVSEEFVETEYYKDLNSVDKHHHTTGKGFIQVEKS 118

Query: 120 NGKSFILAPDND--DAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 167
           +  SF + PDND  D+HHS+ KGNPATN+W+P+       +SDKP RS+N
Sbjct: 119 DT-SFHIEPDNDTHDSHHST-KGNPATNDWVPAPFTEEDTNSDKPNRSDN 166

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106331|ref|XP_002314132.1| predicted protein [Populus trichocarpa] gi|222850540|gb|EEE88087.1| predicted protein [Populus trichocarpa]

 Score =  182 bits (462), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/170 (58%), Positives = 125/170 (73%), Gaps = 5/170 (2%)

Query: 1   MDRVRRPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDS 60
           M+  +RP+RSD H+S EEEAK E+E R  FE +APKRH+KPQRS+YS QYVD      D 
Sbjct: 1   MEFHKRPNRSDAHVSVEEEAKQEEETRGYFEGIAPKRHSKPQRSEYSIQYVDTLTTNGDQ 60

Query: 61  --NQEYSQFQHLQANDSQQKLIWN-GSEVTEEFQETEYYKDLNRINKDHHTTGTGFIKME 117
             N EY +FQ L+ +   QK+I N  S+VT+EF ETEYY+DLN ++K HHTTGTGFIK E
Sbjct: 61  SFNPEYVEFQRLETD--PQKIISNESSKVTDEFVETEYYQDLNCVDKQHHTTGTGFIKTE 118

Query: 118 NANGKSFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVFSSDKPKRSEN 167
           N  GK F LAPD+  + H+SCKGNPATN+W+P+  D V  +SDKPKRS+N
Sbjct: 119 NEYGKRFSLAPDSTSSCHASCKGNPATNDWVPADADMVTSASDKPKRSDN 168

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
TAIR|locus:2115189	173	MEE59 "AT4G37300" [Arabidopsis	0.964	0.930	0.384	8.7e-24

TAIR|locus:2115189 MEE59 "AT4G37300" [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 65/169 (38%), Positives = 98/169 (57%)

Query:     6 RPDRSDVHLSREEEAKMEDEVRENFENLAPKRHTKPQRSDYSSQYVDAFANGSDSNQEYS 65
             +P RSD     E++ K  +++R +F++LAPKR TKP RS+       + ++    + E  
Sbjct:     5 KPSRSDEISDPEQQIKNANQIRADFDSLAPKRPTKPTRSEPGFPGSFSASDKITDHPEAD 64

Query:    66 QFQHLQANDSQQKLIWNG--SEVTEEFQETEYYKDLNRINKDHHTTGTGFIKM-ENANGK 122
             +FQ LQ+  +  K++  G  S V +EF ETEYY +L  I+K HHTTG+GFI + +  NG+
Sbjct:    65 KFQSLQSQ-THGKVLGEGDSSAVQDEFLETEYYSNLTAIDKQHHTTGSGFINVVKEDNGE 123

Query:   123 ---SFILAPDNDDAHHSSCKGNPATNEWIPSADDSVVF-SSDKPKRSEN 167
                +   A   D    +  + NPATNEWIP+ ++     SS KP RSE+
Sbjct:   124 ESEAVTAAAIGDGGEKAVYRSNPATNEWIPATEEDFDSESSSKPNRSES 172


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.308   0.125   0.360    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      167       167   0.00075  108 3  11 23  0.50    32
                                                     30  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  167 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.40u 0.16s 22.56t   Elapsed:  00:00:01
  Total cpu time:  22.40u 0.16s 22.56t   Elapsed:  00:00:01
  Start:  Fri May 10 07:58:23 2013   End:  Fri May 10 07:58:24 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00024173001 SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (166 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00