Citrus Sinensis ID: 031172

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160----
Protein Sequence
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHccccccccccccccccccccHHccccccEEEEEEEcccccccccccEEEEEEEcccccEEEEEcccccccccccccccccEEEEEcccccccEEEEEEEccccccccEEEEEccccccEEEEEccccccccEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHcccccccccccccccccccHHHccccccEEEEEEEEccccccccccEEEEEEEcccccEEEEcccccccccccccccccEEEEEccccccEEEEEEEEEccccccccEEEEEccccccEEEEEccccccccEEEccccccccHHHcc
Coil and Loop (DISEMBL)
MVKLLLFLLIFATATIfshagssiispteiksfepkTVQVAAKSCSYTVIIktscssksytrdKISLAFGDAYGNEVYIkrlddpysrtfescstdtfqisgpctydICYQYLLrsgsdgwkpesvkicgQNIRTVTFFyntfipdgvwfgfnqcrrgsgsavv
Flexible Loop (DISEMBL)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQVAAKSCSYtviiktscssksytrdKISLAFGDAYGNEVYIKRLDDPYSRTFESCStdtfqisgpcTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Low Complexity Region (SEG)
MVKlllfllifatatifSHAGSSIISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Disordered region (IsUnstruct)
**KLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR********
Disordered Region (DISOPRED)
**KLLLFLLIFATATIFSH*********************AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC*********
Disordered Region (DISEMBL)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR********
Disordered Region (DISPRO)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRG******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
255567021	167	conserved hypothetical protein [Ricinus	0.981	0.964	0.682	3e-58
224087146	168	predicted protein [Populus trichocarpa]	0.993	0.970	0.654	4e-54
224142627	167	predicted protein [Populus trichocarpa]	0.993	0.976	0.642	8e-54
3241945	365	unknown protein [Arabidopsis thaliana]	0.945	0.424	0.645	1e-52
186507192	179	Embryo-specific protein 3, (ATS3) [Arabi	0.951	0.871	0.641	7e-52
297827789	179	hypothetical protein ARALYDRAFT_483224 [	0.951	0.871	0.641	3e-51
255553155	163	conserved hypothetical protein [Ricinus	0.932	0.938	0.649	2e-49
224054426	166	predicted protein [Populus trichocarpa]	0.969	0.957	0.612	4e-49
388508934	166	unknown [Lotus japonicus]	0.945	0.933	0.598	8e-48
359490281	165	PREDICTED: uncharacterized protein LOC10	0.969	0.963	0.578	2e-47

>gi|255567021|ref|XP_002524493.1| conserved hypothetical protein [Ricinus communis] gi|223536281|gb|EEF37933.1| conserved hypothetical protein [Ricinus communis]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 112/164 (68%), Positives = 130/164 (79%), Gaps = 3/164 (1%)

Query: 1   MVKLLLFLLIFATATIFSHAGSSIISPTE--IKSFEPKTVQVA-AKSCSYTVIIKTSCSS 57
           MVKLL FLLIF   +I S   +S+  P    + SF PK++Q A A+SCSYTV++KTSCSS
Sbjct: 1   MVKLLSFLLIFVFFSIISPPATSVSPPQPHLLNSFPPKSIQAANARSCSYTVVVKTSCSS 60

Query: 58  KSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSG 117
            SYTRDKISLAFGD+YGNEVY+KRLDDP S TF+ CS+DTFQISGPCTY ICY YLLR G
Sbjct: 61  SSYTRDKISLAFGDSYGNEVYLKRLDDPSSGTFDRCSSDTFQISGPCTYGICYLYLLRRG 120

Query: 118 SDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGS 161
           SDGWKPESVKI G N +T+ F YNTF+P+GVW+GFN CR  S S
Sbjct: 121 SDGWKPESVKIYGPNTKTINFKYNTFLPNGVWYGFNLCRHASSS 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087146|ref|XP_002308084.1| predicted protein [Populus trichocarpa] gi|222854060|gb|EEE91607.1| predicted protein [Populus trichocarpa]

 Score =  215 bits (548), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 110/168 (65%), Positives = 129/168 (76%), Gaps = 5/168 (2%)

Query: 1   MVKLL-LFLLIFATATI-FSHAGSS--IISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCS 56
           MVK + LF LIF  ++I FSHA S    + P   KSF PK +Q AAKSC YT++IKTSC+
Sbjct: 1   MVKQISLFWLIFVFSSITFSHARSLSLTLQPHAPKSFNPKNIQ-AAKSCPYTLVIKTSCT 59

Query: 57  SKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRS 116
           S +YTRDKISLAFGD+YGNEVY+KRLDDP S TFE CSTDTFQI+GPC YDICY Y+LR+
Sbjct: 60  STTYTRDKISLAFGDSYGNEVYMKRLDDPSSGTFERCSTDTFQINGPCVYDICYLYMLRT 119

Query: 117 GSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV 164
           G DGWKPESVKI G   +TV F YN F+P+GVW+GFN C R S S  +
Sbjct: 120 GYDGWKPESVKIYGPYTKTVKFNYNKFLPNGVWYGFNVCVRASLSTAI 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142627|ref|XP_002324656.1| predicted protein [Populus trichocarpa] gi|222866090|gb|EEF03221.1| predicted protein [Populus trichocarpa]

 Score =  214 bits (546), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 108/168 (64%), Positives = 131/168 (77%), Gaps = 5/168 (2%)

Query: 1   MVKLL-LFLLIFATATI-FSHAGS--SIISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCS 56
           MVK L LF L+F  ++I F H+ S    + P  +KSF PK +Q AAKSC Y ++IKTSCS
Sbjct: 1   MVKHLSLFGLVFVFSSITFPHSSSISPTLQPRPLKSFYPKNIQ-AAKSCPYELVIKTSCS 59

Query: 57  SKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRS 116
           S +YTRDKISLAFGD+YGNEVYIKRLDDP S TFE CSTD+FQI+GPC  D+CY Y+LR+
Sbjct: 60  STTYTRDKISLAFGDSYGNEVYIKRLDDPSSGTFERCSTDSFQINGPCVDDVCYLYMLRT 119

Query: 117 GSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSAVV 164
           G+DGWKPESVKI G   +TVTF YN F+P+GVW+GFN C R S SA++
Sbjct: 120 GADGWKPESVKIYGSYTKTVTFNYNKFLPNGVWYGFNVCGRASESAIM 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3241945|gb|AAC23732.1| unknown protein [Arabidopsis thaliana]

 Score =  211 bits (536), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 102/158 (64%), Positives = 124/158 (78%), Gaps = 3/158 (1%)

Query: 1   MVKLLLFLLIFA--TATIFSHAGSSIIS-PTEIKSFEPKTVQVAAKSCSYTVIIKTSCSS 57
           M++L + L +FA  + T+FS A S I + P  I SF PK     A +CSYTVIIKTSCSS
Sbjct: 1   MLRLAIPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSS 60

Query: 58  KSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSG 117
            SYTRDKIS++FGD YGNEVY+KRLDDP SRTFE CS+DT++ISGPC  D+CY YLLR G
Sbjct: 61  VSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQG 120

Query: 118 SDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC 155
           SDGWKPE+VKI G +IR+VTF+YN F+P+ VW+GFN C
Sbjct: 121 SDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVC 158

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186507192|ref|NP_001118501.1| Embryo-specific protein 3, (ATS3) [Arabidopsis thaliana] gi|51968470|dbj|BAD42927.1| unknown protein [Arabidopsis thaliana] gi|51969372|dbj|BAD43378.1| unknown protein [Arabidopsis thaliana] gi|51969672|dbj|BAD43528.1| unknown protein [Arabidopsis thaliana] gi|62320996|dbj|BAD94040.1| hypothetical protein [Arabidopsis thaliana] gi|62321118|dbj|BAD94228.1| hypothetical protein [Arabidopsis thaliana] gi|110736474|dbj|BAF00205.1| hypothetical protein [Arabidopsis thaliana] gi|330254894|gb|AEC09988.1| Embryo-specific protein 3, (ATS3) [Arabidopsis thaliana]

 Score =  208 bits (529), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 102/159 (64%), Positives = 124/159 (77%), Gaps = 3/159 (1%)

Query: 1   MVKLLLFLLIFA--TATIFSHAGSSIIS-PTEIKSFEPKTVQVAAKSCSYTVIIKTSCSS 57
           M++L + L +FA  + T+FS A S I + P  I SF PK     A +CSYTVIIKTSCSS
Sbjct: 1   MLRLAIPLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSS 60

Query: 58  KSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSG 117
            SYTRDKIS++FGD YGNEVY+KRLDDP SRTFE CS+DT++ISGPC  D+CY YLLR G
Sbjct: 61  VSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQG 120

Query: 118 SDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 156
           SDGWKPE+VKI G +IR+VTF+YN F+P+ VW+GFN C 
Sbjct: 121 SDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVCN 159

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827789|ref|XP_002881777.1| hypothetical protein ARALYDRAFT_483224 [Arabidopsis lyrata subsp. lyrata] gi|297327616|gb|EFH58036.1| hypothetical protein ARALYDRAFT_483224 [Arabidopsis lyrata subsp. lyrata]

 Score =  206 bits (524), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 102/159 (64%), Positives = 122/159 (76%), Gaps = 3/159 (1%)

Query: 1   MVKLLLFLLIFA--TATIFSHAGSSIIS-PTEIKSFEPKTVQVAAKSCSYTVIIKTSCSS 57
           M++L + L +FA  + T FS A S I + P  I SF PK     A  CSYTVIIKTSCSS
Sbjct: 1   MLRLAISLFLFALCSLTSFSSARSFITTKPLPIDSFLPKPKLENAGVCSYTVIIKTSCSS 60

Query: 58  KSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSG 117
            SYTRDKIS++FGD YGNEVY+KRLDDP SRTFE CS+DT++ISGPC  D+CY YLLR G
Sbjct: 61  VSYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQG 120

Query: 118 SDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 156
           SDGWKPE+VKI G +IR+VTF+YN F+P+ VW+GFN C 
Sbjct: 121 SDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNVCN 159

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553155|ref|XP_002517620.1| conserved hypothetical protein [Ricinus communis] gi|223543252|gb|EEF44784.1| conserved hypothetical protein [Ricinus communis]

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 100/154 (64%), Positives = 112/154 (72%), Gaps = 1/154 (0%)

Query: 3   KLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTR 62
           K + FLL  A     S+A S I  P  +KSF+    Q  A SCSYTV I TSCSS  YTR
Sbjct: 5   KAVTFLLFLALIVTLSNARSIIPLPQPLKSFKINATQ-NANSCSYTVKITTSCSSTRYTR 63

Query: 63  DKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWK 122
           D+ISLAFGDAYGN+VY  RLDDPYS TFESCSTDTFQI GPCTY ICY YL RSG DGWK
Sbjct: 64  DQISLAFGDAYGNQVYAPRLDDPYSATFESCSTDTFQIKGPCTYQICYVYLYRSGYDGWK 123

Query: 123 PESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 156
           P++V + G   ++VTF YNTFIP+GVWFGFN C 
Sbjct: 124 PKTVTVYGYYTKSVTFTYNTFIPNGVWFGFNYCN 157

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054426|ref|XP_002298254.1| predicted protein [Populus trichocarpa] gi|222845512|gb|EEE83059.1| predicted protein [Populus trichocarpa]

 Score =  199 bits (505), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 98/160 (61%), Positives = 112/160 (70%), Gaps = 1/160 (0%)

Query: 4   LLLFLLIFATATIFSHAGSSIISPTEIKSFE-PKTVQVAAKSCSYTVIIKTSCSSKSYTR 62
           L+ F L  A       A S I  P  + SF+   T+Q  A SCSYTV I+TSCSS  YTR
Sbjct: 7   LVTFWLYLAVVFTPPQAKSKITQPQPLTSFKINTTLQNTASSCSYTVTIRTSCSSSRYTR 66

Query: 63  DKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWK 122
           D+ISLAFGDAYG +VY+ RLDDP SRTFESCSTDTF I GPCTY ICY YL R+G DGWK
Sbjct: 67  DRISLAFGDAYGYQVYVPRLDDPRSRTFESCSTDTFHIDGPCTYQICYVYLYRNGYDGWK 126

Query: 123 PESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSGSA 162
           PES+ I G    +VTF+YNTFIP+ VW+GFN C   S SA
Sbjct: 127 PESITISGYYTSSVTFYYNTFIPNAVWYGFNHCNAASSSA 166

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508934|gb|AFK42533.1| unknown [Lotus japonicus]

 Score =  194 bits (494), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 94/157 (59%), Positives = 115/157 (73%), Gaps = 2/157 (1%)

Query: 2   VKLLLFLLIFATATIFSHAGSSIISPTEI-KSFEPKTVQVAAKS-CSYTVIIKTSCSSKS 59
           +K L  +L F+  ++FS A   +  P +  +SF+P   Q    + CSYTV I+TSCSS S
Sbjct: 1   MKTLTLILTFSIISVFSQATLLLTDPPQPNESFKPNLTQHQQNAGCSYTVTIRTSCSSPS 60

Query: 60  YTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSD 119
           YTRD+ISL+FGDAYG +VY+ RLDDP SRTFE CSTDTFQI+GPCTY ICY YL RSG D
Sbjct: 61  YTRDRISLSFGDAYGYQVYVPRLDDPSSRTFERCSTDTFQINGPCTYQICYLYLYRSGYD 120

Query: 120 GWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCR 156
           GW PESV + G N + VTF+YN FIP G+WFGF+ CR
Sbjct: 121 GWIPESVTVSGYNSQPVTFYYNAFIPAGIWFGFDYCR 157

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490281|ref|XP_003634058.1| PREDICTED: uncharacterized protein LOC100854618 [Vitis vinifera] gi|296084102|emb|CBI24490.3| unnamed protein product [Vitis vinifera]

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/159 (57%), Positives = 113/159 (71%)

Query: 2   VKLLLFLLIFATATIFSHAGSSIISPTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSYT 61
           +K + FLL  A+  IFS A S +  P  +KS    ++Q   ++CS+ VIIKTSCSS  +T
Sbjct: 1   MKSVYFLLHLASIFIFSQAQSIVSHPHALKSQNFNSIQKVGRTCSFVVIIKTSCSSIQFT 60

Query: 62  RDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGW 121
           RD+ISLAFGDAYGN++Y  R+DDP SR FE C +DTFQ+SG CTY IC+    RSGSDGW
Sbjct: 61  RDQISLAFGDAYGNKIYAPRIDDPTSRRFERCVSDTFQLSGECTYQICHVAFYRSGSDGW 120

Query: 122 KPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQCRRGSG 160
           KPESV I G N R VTF+Y  FIP G+WFGFN C + SG
Sbjct: 121 KPESVTIYGFNSRPVTFYYKRFIPKGIWFGFNHCSKASG 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
TAIR|locus:4515102981	179	AT2G41475 "AT2G41475" [Arabido	0.871	0.798	0.668	2.5e-49
TAIR|locus:2167908	190	AT5G62200 "AT5G62200" [Arabido	0.871	0.752	0.562	6.4e-44
TAIR|locus:2167928	223	AT5G62210 "AT5G62210" [Arabido	0.786	0.578	0.432	9.4e-27
TAIR|locus:2182865	213	ATS3 "AT5G07190" [Arabidopsis	0.756	0.582	0.406	3.8e-23

TAIR|locus:4515102981 AT2G41475 "AT2G41475" [Arabidopsis thaliana (taxid:3702)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 97/145 (66%), Positives = 114/145 (78%)

Query:    18 SHAGSSIIS-PTEIKSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNE 76
             S A S I + P  I SF PK     A +CSYTVIIKTSCSS SYTRDKIS++FGD YGNE
Sbjct:    20 SSARSFITTKPLPIDSFIPKPKLENAAACSYTVIIKTSCSSVSYTRDKISISFGDVYGNE 79

Query:    77 VYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTV 136
             VY+KRLDDP SRTFE CS+DT++ISGPC  D+CY YLLR GSDGWKPE+VKI G +IR+V
Sbjct:    80 VYVKRLDDPSSRTFEKCSSDTYKISGPCMRDVCYLYLLRQGSDGWKPENVKIYGSSIRSV 139

Query:   137 TFFYNTFIPDGVWFGFNQCRRGSGS 161
             TF+YN F+P+ VW+GFN C  G G+
Sbjct:   140 TFYYNLFLPNSVWYGFNVCN-GIGN 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2167908 AT5G62200 "AT5G62200" [Arabidopsis thaliana (taxid:3702)]

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 81/144 (56%), Positives = 103/144 (71%)

Query:    22 SSIISPTEI-KSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIK 80
             S ++ P  + +SF    +Q    +C+YTVII TSCSS  YTRD+IS+AFGD YGN++Y  
Sbjct:    24 SKVLDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAP 83

Query:    81 RLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFY 140
             RLDDP ++TFE CS+DTFQI+GPCTY ICY YL RSG DGW P +VKI     + VTF Y
Sbjct:    84 RLDDPSTKTFEQCSSDTFQINGPCTYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVTFPY 143

Query:   141 NTFIPDGVWFGFNQCRRGSGSAVV 164
             NT++P+ VW+GFN C   S S V+
Sbjct:   144 NTYVPESVWYGFNYCNSASDSNVL 167

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

TAIR|locus:2167928 AT5G62210 "AT5G62210" [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 58/134 (43%), Positives = 83/134 (61%)

Query:    27 PTEIKSFEPKTVQV---AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLD 83
             P    +FEP    +     +SC YTVI+ TSC S  ++RD++++A GDA  N+V   RLD
Sbjct:    19 PIPSLTFEPLISSLDLHEEESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLD 78

Query:    84 DPYSRT--FESCSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYN 141
              P S    FE CS+DTFQ+ G C   IC  Y+ RSG+DGW PE+V+I  +  ++V F +N
Sbjct:    79 KPLSGGGGFEKCSSDTFQVKGKCLNTICSVYIYRSGTDGWIPETVEIYKEGSKSVKFDFN 138

Query:   142 TFIPDGVWFGFNQC 155
               +P+ +W+G N C
Sbjct:   139 KNVPENIWYGNNYC 152

GO:0003674 "molecular_function" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0080167 "response to karrikin" evidence=IEP

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2182865 ATS3 "AT5G07190" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 52/128 (40%), Positives = 76/128 (59%)

Query:    32 SFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRT-- 89
             +F+   +Q+   +C YTV++ TSC S   TRD+IS+ FGDA GN+VY  +L         
Sbjct:    21 AFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGG 80

Query:    90 FESCSTDTFQISGPCTYD-ICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPD-G 147
                CST+TFQ+ G C  D IC  Y+ R+G DGW PES++I  +  ++V F ++  +P   
Sbjct:    81 LGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLN 140

Query:   148 VWFGFNQC 155
              W+G N C
Sbjct:   141 TWYGHNNC 148


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.134   0.416    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      164       150   0.00087  104 3  11 22  0.46    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  152 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.51u 0.21s 15.72t   Elapsed:  00:00:01
  Total cpu time:  15.51u 0.21s 15.72t   Elapsed:  00:00:01
  Start:  Fri May 10 14:16:24 2013   End:  Fri May 10 14:16:25 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;TAS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00060571 hypothetical protein (168 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	164
pfam06232	126	pfam06232, ATS3, Embryo-specific protein 3, (ATS3)	8e-63
cd00113	116	cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, A	3e-27
cd01754	129	cd01754, PLAT_plant_stress, PLAT/LH2 domain of pla	0.001
pfam01477	115	pfam01477, PLAT, PLAT/LH2 domain	0.004

>gnl|CDD|218949 pfam06232, ATS3, Embryo-specific protein 3, (ATS3)

 Score =  189 bits (481), Expect = 8e-63
 Identities = 81/123 (65%), Positives = 98/123 (79%), Gaps = 1/123 (0%)

Query: 34  EPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYS-RTFES 92
           +  T ++A  SCSYTVIIKTSCSS +YT D+IS+AFGDAYGN+VY+ RLDDP S   FE 
Sbjct: 4   QSNTTELAGSSCSYTVIIKTSCSSPAYTTDQISIAFGDAYGNQVYVPRLDDPSSGGGFER 63

Query: 93  CSTDTFQISGPCTYDICYQYLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGF 152
           C+TDTFQ+SGPCTY ICY YL RSG+DGW PE+V I G     VTF++NTF+P+GVW+GF
Sbjct: 64  CTTDTFQVSGPCTYPICYLYLYRSGTDGWIPETVTIYGYGYPPVTFYFNTFLPEGVWYGF 123

Query: 153 NQC 155
           N C
Sbjct: 124 NYC 126

Family of plant seed-specific proteins. Length = 126

>gnl|CDD|238061 cd00113, PLAT, PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

 Score = 98.6 bits (246), Expect = 3e-27
 Identities = 46/118 (38%), Positives = 55/118 (46%), Gaps = 11/118 (9%)

Query: 45  CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP- 103
           C YTV IKT     + T   ISLA     GN   I  LD P   +FE  STDTFQI    
Sbjct: 1   CRYTVTIKTGDKKGAGTDSNISLALYGENGNSSDIPILDGP--GSFERGSTDTFQIDLKL 58

Query: 104 CTYDICYQYLLRSGS---DGWKPESVKICGQNIRT---VTFFYNTFIPDGVWFGFNQC 155
              DI   YL R GS   DGW  ES+ +  Q + T    TF  N ++  G W+   + 
Sbjct: 59  DIGDITKVYLRRDGSGLSDGWYCESITV--QALGTKKVYTFPVNRWVLGGKWYTSVRS 114

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. Length = 116

>gnl|CDD|238852 cd01754, PLAT_plant_stress, PLAT/LH2 domain of plant-specific single domain protein family with unknown function

 Score = 37.1 bits (86), Expect = 0.001
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 10/87 (11%)

Query: 45  CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDD------PYSRTFESCSTDTF 98
           C YT+ ++T    K+ T  +ISL   DA G  + I  L+            FE  + D F
Sbjct: 1   CVYTIYVQTGSIWKAGTDSRISLQIYDADGPGLRIANLEAWGGLMGAGHDYFERGNLDRF 60

Query: 99  QISGPC-TYDICYQYLLRSGSD---GW 121
              GPC     C+  L   G+    GW
Sbjct: 61  SGRGPCLPSPPCWMNLTSDGTGNHPGW 87

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins. Length = 129

>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain

 Score = 35.1 bits (81), Expect = 0.004
 Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 6/97 (6%)

Query: 47  YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTY 106
           Y V +KT     + T   + ++    +G       L +P  +  +  STD+F        
Sbjct: 1   YQVKVKTGDELGAGTDANVYISLYGTHGKSGEYP-LLEPELKPDDRGSTDSFTFDTDEDL 59

Query: 107 -DICYQYLLR---SGSDGWKPESVKIC-GQNIRTVTF 138
            D+    +       SD W  +S+ +  G    T TF
Sbjct: 60  GDLGAIKIRWEINGHSDEWFLKSILVKSGPTGGTYTF 96

This domain is found in a variety of membrane or lipid associated proteins. It is called the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain. The known structure of pancreatic lipase shows this domain binds to procolipase pfam01114, which mediates membrane association. So it appears possible that this domain mediates membrane attachment via other protein binding partners. The structure of this domain is known for many members of the family and is composed of a beta sandwich. Length = 115

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	164
PF06232	125	ATS3: Embryo-specific protein 3, (ATS3); InterPro:	100.0
cd01754	129	PLAT_plant_stress PLAT/LH2 domain of plant-specifi	100.0
cd01753	113	PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u	99.97
cd01756	120	PLAT_repeat PLAT/LH2 domain repeats of family of p	99.97
cd01752	120	PLAT_polycystin PLAT/LH2 domain of polycystin-1 li	99.97
cd02899	109	PLAT_SR Scavenger receptor protein. A subfamily of	99.96
cd00113	116	PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin	99.96
cd01757	114	PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter	99.94
smart00308	105	LH2 Lipoxygenase homology 2 (beta barrel) domain.	99.94
PF01477	113	PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg	99.92
cd01755	120	PLAT_lipase PLAT/ LH2 domain present in connection	99.66
cd01758	137	PLAT_LPL PLAT/ LH2 domain present in lipoprotein l	99.43
KOG2080	1295	consensus Uncharacterized conserved protein, conta	98.71
cd01759	113	PLAT_PL PLAT/LH2 domain of pancreatic triglyceride	98.01
TIGR03230	442	lipo_lipase lipoprotein lipase. Members of this pr	97.37
cd01751	137	PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re	82.64

>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress)

Probab=100.00  E-value=8.8e-40  Score=249.94  Aligned_cols=122  Identities=66%  Similarity=1.201  Sum_probs=115.4

Q ss_pred             CCcccc-ccccCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCC-CcccCCCcceeEeecCCCCCeEEE
Q 031172           34 EPKTVQ-VAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYS-RTFESCSTDTFQISGPCTYDICYQ  111 (164)
Q Consensus        34 ~~~~~~-~~~~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~-~~FErGsvD~F~v~~~~lG~i~~l  111 (164)
                      ++.+.+ .+.+.|+|+|+|+|||.++|||+|+|+|+|++++|+++...+||+|.+ ++||||++|+|+++++|+++||+|
T Consensus         2 ~~~~~~~~~~~~CsYtv~IkTsC~s~a~T~d~Isi~FgDa~Gn~v~~~~Ld~p~~~~~FErCs~DtF~v~G~C~~~IC~l   81 (125)
T PF06232_consen    2 QQINETEQQAGSCSYTVTIKTSCSSPAGTDDQISIAFGDAYGNQVYVPRLDDPGSGDTFERCSTDTFQVTGPCLYQICYL   81 (125)
T ss_pred             cccchhhhcCCCCcEEEEEEeCcCCCcCCcceEEEEEecCCCCEEEEccCCCCCccCchhcCCcceeEeecccCCcccEE
Confidence            344454 467779999999999999999999999999999999999999999987 999999999999999999999999


Q ss_pred             EEEEcCCCCceeeEEEEEeCCCCeEEEEcCeecCCCceeeecCC
Q 031172          112 YLLRSGSDGWKPESVKICGQNIRTVTFFYNTFIPDGVWFGFNQC  155 (164)
Q Consensus       112 ~L~hdG~d~W~~e~V~V~~~~~~~~~F~cnrWL~~~~~~~~~~C  155 (164)
                      +|+|+|.|||+|+||+|+....++.+|++|+||++|+|||+|+|
T Consensus        82 yL~r~G~dGW~Pe~V~Iy~~~~~~~~F~~~~~lp~~vwyG~n~C  125 (125)
T PF06232_consen   82 YLYRSGSDGWKPEWVQIYGSGSKPVTFYFNTFLPNGVWYGFNYC  125 (125)
T ss_pred             EEEEccCCCCEeCeEEEEEcCCCCeEEECCCcCCCCCcccccCC
Confidence            99999999999999999999889999999999999999999999

ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].

>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function

Probab=100.00  E-value=4.1e-33  Score=214.36  Aligned_cols=102  Identities=25%  Similarity=0.385  Sum_probs=89.7

Q ss_pred             eeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCC-------CcCCCcccCCCcceeEeecCC-CCCeEEEEEEEc
Q 031172           45 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLD-------DPYSRTFESCSTDTFQISGPC-TYDICYQYLLRS  116 (164)
Q Consensus        45 ~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld-------~~~~~~FErGsvD~F~v~~~~-lG~i~~l~L~hd  116 (164)
                      |.|+|+|+||++++|||||+|+|+|+|++|++ ....|.       ++.++.||||++|+|.|+.++ +|+|++|+||||
T Consensus         1 ~~Y~I~V~TG~~~gAGTdanV~i~l~G~~G~s-~~~~l~~~~~~l~~~~~~~FerG~~d~F~v~~~~~lG~l~~irI~HD   79 (129)
T cd01754           1 CVYTIYVQTGSIWKAGTDSRISLQIYDADGPG-LRIANLEAWGGLMGAGHDYFERGNLDRFSGRGPCLPSPPCWMNLTSD   79 (129)
T ss_pred             CEEEEEEEECCCcccCCcceEEEEEEeCCCCc-ccEEcccccccccccccccccCCCccEEEEEeccCCCCeEEEEEEEC
Confidence            78999999999999999999999999999975 555553       355789999999999999865 599999999999


Q ss_pred             CC--C-CceeeEEEEEeC-C---CCeEEEEcCeecCCC
Q 031172          117 GS--D-GWKPESVKICGQ-N---IRTVTFFYNTFIPDG  147 (164)
Q Consensus       117 G~--d-~W~~e~V~V~~~-~---~~~~~F~cnrWL~~~  147 (164)
                      ++  + +|||++|+|++. +   ++.++|||||||+.+
T Consensus        80 n~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d  117 (129)
T cd01754          80 GTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATD  117 (129)
T ss_pred             CCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCC
Confidence            54  3 999999999986 3   458999999999977

Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase

Probab=99.97  E-value=7.1e-31  Score=196.95  Aligned_cols=102  Identities=20%  Similarity=0.167  Sum_probs=92.8

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC--C-Cc
Q 031172           46 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS--D-GW  121 (164)
Q Consensus        46 ~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~-~~lG~i~~l~L~hdG~--d-~W  121 (164)
                      .|+|+|+||++++|||+|+|+|+|+|++|+ +....|+++.+ +||||++|+|.+.. .++|+|++|+||||+.  + +|
T Consensus         2 ~Y~V~V~Tg~~~~AGT~a~V~i~l~G~~g~-S~~~~L~~~~~-~FerG~~d~F~v~~~~~lG~l~~i~i~~d~~g~~~~W   79 (113)
T cd01753           2 EYKVTVATGSSLFAGTDDYIYLTLVGTAGE-SEKQLLDRPGY-DFERGAVDEYKVKVPEDLGELLLVRLRKRKYLLFDAW   79 (113)
T ss_pred             EEEEEEEECCCcCCccccEEEEEEEECCCc-ccCEEcCCCCC-ccCCCCeeEEEEecccCCCCcEEEEEEECCCCCCCCe
Confidence            699999999999999999999999999997 57888988775 59999999999987 5679999999999953  3 99


Q ss_pred             eeeEEEEEeCCCCeEEEEcCeecCCCce
Q 031172          122 KPESVKICGQNIRTVTFFYNTFIPDGVW  149 (164)
Q Consensus       122 ~~e~V~V~~~~~~~~~F~cnrWL~~~~~  149 (164)
                      ||++|+|+++.++.+.|||||||+++.-
T Consensus        80 ~l~~V~V~~~~~~~~~F~c~rWl~~~~~  107 (113)
T cd01753          80 FCNYITVTGPGGDEYHFPCYRWIEGYGT  107 (113)
T ss_pred             eecEEEEEcCCCCEEEEEhHHeECCCCE
Confidence            9999999988899999999999998743

As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.

>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function

Probab=99.97  E-value=4.5e-30  Score=193.23  Aligned_cols=102  Identities=20%  Similarity=0.240  Sum_probs=94.3

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCc-CCCcccCCCcceeEeecCCCCCeEEEEEEEcCC---CCc
Q 031172           46 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDP-YSRTFESCSTDTFQISGPCTYDICYQYLLRSGS---DGW  121 (164)
Q Consensus        46 ~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~-~~~~FErGsvD~F~v~~~~lG~i~~l~L~hdG~---d~W  121 (164)
                      .|+|+|+||+.++|||+|+|+|+|+|++|+ +....|+++ .+++||||++|+|.+...++|+|.+|+||||+.   ++|
T Consensus         2 ~Y~v~v~TG~~~~AGT~a~V~i~L~G~~g~-s~~~~L~~~~~~~~FerGs~d~F~i~~~~lG~l~~i~i~~d~~g~~~~W   80 (120)
T cd01756           2 TYEVTVKTGDVKGAGTDANVFITLYGENGD-TGKRKLKKSNNKNKFERGQTDKFTVEAVDLGKLKKIRIGHDNSGLGAGW   80 (120)
T ss_pred             EEEEEEEECCCcCCCCCcEEEEEEEeCCCc-cccEEccCCCcCCcccCCCeEEEEEEecCCCCeEEEEEEECCCCCCCCc
Confidence            699999999999999999999999999996 578889886 678999999999999888889999999999954   399


Q ss_pred             eeeEEEEEeC-CCCeEEEEcCeecCCCc
Q 031172          122 KPESVKICGQ-NIRTVTFFYNTFIPDGV  148 (164)
Q Consensus       122 ~~e~V~V~~~-~~~~~~F~cnrWL~~~~  148 (164)
                      ||++|+|+++ +++.+.|||||||+.+.
T Consensus        81 ~~~~V~V~~~~~~~~~~F~~~~Wl~~~~  108 (120)
T cd01756          81 FLDKVEIREPGTGDEYTFPCNRWLDKDE  108 (120)
T ss_pred             EEeEEEEEECCCceEEEEEeCCccCCCC
Confidence            9999999988 78999999999999874

In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins

Probab=99.97  E-value=4.5e-30  Score=193.44  Aligned_cols=102  Identities=21%  Similarity=0.223  Sum_probs=93.7

Q ss_pred             eeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC--C-C
Q 031172           45 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS--D-G  120 (164)
Q Consensus        45 ~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~-~~lG~i~~l~L~hdG~--d-~  120 (164)
                      +.|+|+|+||+.++|||+|+|+|+|+|++|+ +....|+++.+++||||++|+|.+.. .++|+|++|+||||+.  + +
T Consensus         1 ~~Y~v~v~Tg~~~gAGT~a~V~i~L~G~~g~-s~~~~L~~~~~~~F~rG~~~~f~i~~~~dlG~l~~i~l~hd~~g~~~~   79 (120)
T cd01752           1 YLYLVTVFTGWRRGAGTTAKVTITLYGAEGE-SEPHHLRDPEKPIFERGSVDSFLLTTPFPLGELQSIRLWHDNSGLSPS   79 (120)
T ss_pred             CEEEEEEEECCCCCCCcccEEEEEEEeCCCC-cccEEcCCCCccceeCCCeeEEEecCccCCCCccEEEEEECCCCCCCC
Confidence            4799999999999999999999999999997 57788988887899999999999986 5779999999999954  3 9


Q ss_pred             ceeeEEEEEeC-CCCeEEEEcCeecCCC
Q 031172          121 WKPESVKICGQ-NIRTVTFFYNTFIPDG  147 (164)
Q Consensus       121 W~~e~V~V~~~-~~~~~~F~cnrWL~~~  147 (164)
                      |||++|+|+++ +++.+.|||+|||+.+
T Consensus        80 W~l~~V~V~~~~t~~~~~F~~~rWl~~~  107 (120)
T cd01752          80 WYLSRVIVRDLQTGKKWFFLCNDWLSVE  107 (120)
T ss_pred             eEEEEEEEEECCCCcEEEEEeCcEECCc
Confidence            99999999988 7899999999999976

Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>cd02899 PLAT_SR Scavenger receptor protein

Probab=99.96  E-value=1e-29  Score=190.65  Aligned_cols=97  Identities=19%  Similarity=0.212  Sum_probs=89.3

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCCC-Cceee
Q 031172           46 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGSD-GWKPE  124 (164)
Q Consensus        46 ~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~~lG~i~~l~L~hdG~d-~W~~e  124 (164)
                      .|+|+|+||+.++|||+++|+|+|+|++|. +....|++    +||||++|+|.|+..++|+|.+|+|+++|.+ +|||+
T Consensus         2 ~Y~I~V~TG~~~~AGT~~~V~i~L~G~~g~-S~~~~L~~----~F~~G~~d~F~v~~~dLG~l~~i~l~n~g~~~~Wf~~   76 (109)
T cd02899           2 TYTASVQTGKDKEAGTNGTIEITLLGSSGR-SNPKTLSQ----GFYPGSLKRIRFRAADVGDINAIILSNTALNDPWYCD   76 (109)
T ss_pred             eEEEEEEECCCCCCCccceEEEEEEECCCC-cCCEEccC----ccCCCceEEEEECccccCceEEEEEECCCCCCCceee
Confidence            699999999999999999999999999996 56777764    6999999999999888899999999888864 99999


Q ss_pred             EEEEEeCCCCeEEEEcCeecCCC
Q 031172          125 SVKICGQNIRTVTFFYNTFIPDG  147 (164)
Q Consensus       125 ~V~V~~~~~~~~~F~cnrWL~~~  147 (164)
                      +|+|++++++.+.|||||||+..
T Consensus        77 ~V~V~~~~g~~~~Fpc~rWla~~   99 (109)
T cd02899          77 YVRIKSEDGKVFAFNVKRWIGYP   99 (109)
T ss_pred             EEEEECCCCCEEEEEcceeeCCc
Confidence            99999998899999999999964

A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.

>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain

Probab=99.96  E-value=3.9e-29  Score=184.82  Aligned_cols=109  Identities=37%  Similarity=0.456  Sum_probs=95.8

Q ss_pred             eeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecC-CCCCeEEEEEEEcCCC---C
Q 031172           45 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-CTYDICYQYLLRSGSD---G  120 (164)
Q Consensus        45 ~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~-~lG~i~~l~L~hdG~d---~  120 (164)
                      |.|+|+|+||+..+|||+++|+|.|+|++|++. ...|.+.... ||||++|+|.+..+ ++|+|+.|+|+||+.+   +
T Consensus         1 ~~Y~v~V~Tg~~~~agT~~~v~i~l~g~~g~s~-~~~l~~~~~~-f~~g~~~~f~v~~~~~lG~i~~v~l~~d~~g~~~~   78 (116)
T cd00113           1 CRYTVTIKTGDKKGAGTDSNISLALYGENGNSS-DIPILDGPGS-FERGSTDTFQIDLKLDIGDITKVYLRRDGSGLSDG   78 (116)
T ss_pred             CEEEEEEEECCCCCCCccCEEEEEEEeCCCCcc-cEEccCCCCc-ccCCCceEEEEeccCCCcCeEEEEEEECCCCCCCC
Confidence            689999999999999999999999999999864 4555443323 99999999999887 7799999999999764   9


Q ss_pred             ceeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031172          121 WKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  155 (164)
Q Consensus       121 W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  155 (164)
                      |||++|+|+++ +++.+.|+|++||+.+.++..+.|
T Consensus        79 W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~  114 (116)
T cd00113          79 WYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRS  114 (116)
T ss_pred             EEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceee
Confidence            99999999987 679999999999999988877665

It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.

>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family

Probab=99.94  E-value=7.6e-27  Score=176.37  Aligned_cols=94  Identities=15%  Similarity=0.140  Sum_probs=81.5

Q ss_pred             eEEEEEEcCCC-CCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC--C-Cc
Q 031172           46 SYTVIIKTSCS-SKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--D-GW  121 (164)
Q Consensus        46 ~Y~V~V~TG~~-~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~~lG~i~~l~L~hdG~--d-~W  121 (164)
                      .|+|+|+||.. ++|||+|||+|+|+|++|+ +.++.|++.   .|      .|.+...++|+|.+|+||||++  + +|
T Consensus         2 ~Y~VtV~TG~~~~gAGT~anV~i~L~G~~g~-s~~~~L~~~---~f------~~~v~~~~LG~L~~irIwHDnsG~~~~W   71 (114)
T cd01757           2 PYHVVIVPSKKLGGSMFTANPWICVSGELGE-TPPLQIPKN---SL------EMTFDCQNLGKLTTVQIGHDNSGLLAKW   71 (114)
T ss_pred             eEEEEEEeCCCCCCCCCcceEEEEEEEcCCC-cCCEEecCC---ce------EEEEecCCcCCcEEEEEEECCCCCCCCe
Confidence            69999999999 5999999999999999996 577888632   23      5777778899999999999943  3 99


Q ss_pred             eeeEEEEEeC-CCCeEEEEcCeecCCCce
Q 031172          122 KPESVKICGQ-NIRTVTFFYNTFIPDGVW  149 (164)
Q Consensus       122 ~~e~V~V~~~-~~~~~~F~cnrWL~~~~~  149 (164)
                      ||++|+|+++ +++.|+|||||||+.+..
T Consensus        72 fl~~V~V~d~~t~~~~~FpC~rWLa~~~~  100 (114)
T cd01757          72 LVEYVMVRNEITGHTYKFPCGRWLGEGVD  100 (114)
T ss_pred             eeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence            9999999985 899999999999997744

PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.

>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain

Probab=99.94  E-value=7.2e-26  Score=164.94  Aligned_cols=100  Identities=18%  Similarity=0.160  Sum_probs=87.5

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecC-CCCCeEEEEEEEcC-CCCcee
Q 031172           46 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-CTYDICYQYLLRSG-SDGWKP  123 (164)
Q Consensus        46 ~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~-~lG~i~~l~L~hdG-~d~W~~  123 (164)
                      .|+|+|.||...+|||+|+|+|+|+|++|++ ....+....+..||||++++|.+..+ ++|+|..|+||||+ ..+|||
T Consensus         2 ~Y~v~V~Tg~~~~aGT~~~V~l~L~g~~~~s-~~~~~~~~~~~~f~~g~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l   80 (105)
T smart00308        2 KYKVTVTTGGLDFAGTTASVSLSLVGAEGDG-KESKLDYLFKGIFARGSTYEFTFDVDEDFGELGAVKIKNEHRHPEWFL   80 (105)
T ss_pred             EEEEEEEECCccCCCccceEEEEEEeCCCCC-cceeccccCCccccCCceEEEEEecccCCCCcEEEEEEeCCCCCCeEE
Confidence            6999999999999999999999999999752 34444444445699999999999874 67999999999998 579999


Q ss_pred             eEEEEEeC-CCCeEEEEcCeecCC
Q 031172          124 ESVKICGQ-NIRTVTFFYNTFIPD  146 (164)
Q Consensus       124 e~V~V~~~-~~~~~~F~cnrWL~~  146 (164)
                      ++|+|.++ +++.+.|+||+||+.
T Consensus        81 ~~V~V~~~~~~~~~~F~c~~Wl~~  104 (105)
T smart00308       81 KSITVKDLPTGGKYHFPCNSWVYP  104 (105)
T ss_pred             EEEEEEECCCCCEEEEEcCceeCC
Confidence            99999986 889999999999975

>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1

Probab=99.92  E-value=6.9e-25  Score=159.86  Aligned_cols=101  Identities=27%  Similarity=0.281  Sum_probs=86.8

Q ss_pred             EEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC---CCce
Q 031172           47 YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS---DGWK  122 (164)
Q Consensus        47 Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~-~~lG~i~~l~L~hdG~---d~W~  122 (164)
                      |+|+|+||+..+|||+|+|+|.|+|++|++ ....|.++....+  |++|+|.+.. .++|+|.+|+|+|++.   ++||
T Consensus         1 Y~v~v~Tg~~~~aGT~~~V~i~l~G~~g~s-~~~~l~~~~~~~~--g~~d~F~i~~~~~lG~i~~i~i~~~~~~~~~~W~   77 (113)
T PF01477_consen    1 YRVTVKTGDERGAGTDANVYITLYGSKGKS-GEIELLDPSGFNF--GSTDTFTIETPEDLGEIQKIRIWHDGSGPSPSWY   77 (113)
T ss_dssp             EEEEEEEESSTEEEESSEEEEEEEETTEEE-EEEEEEEEEETST--TEEEEEEEEESSCGCSEEEEEEEEESSSSSSEEE
T ss_pred             CEEEEEECCCCCCCcCCeEEEEEEECCCCc-ceEEEeeeeeccc--CceEEeeeeecccCCCCcEEEEEEccCCCccceE
Confidence            999999999999999999999999999975 5555554432333  9999999988 5679999999999943   4999


Q ss_pred             eeEEEEEeC-CCCeEEEEcCeecCCCcee
Q 031172          123 PESVKICGQ-NIRTVTFFYNTFIPDGVWF  150 (164)
Q Consensus       123 ~e~V~V~~~-~~~~~~F~cnrWL~~~~~~  150 (164)
                      |++|+|.++ +++.+.|+||+||..+..+
T Consensus        78 l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~  106 (113)
T PF01477_consen   78 LDSVVVTDGETGRTYTFPCNRWLDPDKDY  106 (113)
T ss_dssp             EEEEEEEETTTSEEEEEEEEEEESTTEGC
T ss_pred             EEEEEEEeCCCCcEEEEEcCCEECCCCCC
Confidence            999999986 8899999999999987543

13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....

>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain

Probab=99.66  E-value=1.4e-15  Score=115.14  Aligned_cols=90  Identities=12%  Similarity=0.066  Sum_probs=77.7

Q ss_pred             eeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEEEEEcC----C-
Q 031172           45 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQYLLRSG----S-  118 (164)
Q Consensus        45 ~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~-~~~lG~i~~l~L~hdG----~-  118 (164)
                      +.|+|+|.||...+|||+++|+|+|+|++|+ +....|.++   .|++|++++|.+. ..++|+|.+|++|||+    . 
T Consensus         1 ~hY~vtV~~~~~~~agt~~~v~v~L~G~~g~-s~~~~l~~~---~~~~g~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~   76 (120)
T cd01755           1 WHYQVKVHLSGKKNLEVDGTFTVSLYGTKGE-TEQLPIVLG---ELKPNKTYSFLIDTEVDIGDLLKVKFKWENNVINSN   76 (120)
T ss_pred             CEEEEEEEEeCccccCcCccEEEEEEcCCCC-cccEEEeCC---cccCCCEEEEEEEcCCCccceEEEEEEEcCCCcccc
Confidence            4699999999999999999999999999997 467777643   4799999999995 5778999999999993    2 


Q ss_pred             ----C-CceeeEEEEEeC-CCCeEEE
Q 031172          119 ----D-GWKPESVKICGQ-NIRTVTF  138 (164)
Q Consensus       119 ----d-~W~~e~V~V~~~-~~~~~~F  138 (164)
                          . .|++++|.|++. +++++.|
T Consensus        77 ~~~~~p~~~~~~I~Vq~get~~~~~F  102 (120)
T cd01755          77 SGETLPKLGARKIRVKSGETQKKFTF  102 (120)
T ss_pred             cccCCCcEEEEEEEEEECCCCCEEEE
Confidence                3 999999999987 6666666

This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL)

Probab=99.43  E-value=1.7e-12  Score=100.84  Aligned_cols=91  Identities=16%  Similarity=0.227  Sum_probs=75.1

Q ss_pred             eeEEEEEEcCCCCCCc-CceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEEE-EEcCC--C
Q 031172           45 CSYTVIIKTSCSSKSY-TRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQYL-LRSGS--D  119 (164)
Q Consensus        45 ~~Y~V~V~TG~~~~AG-Tda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~-~~~lG~i~~l~L-~hdG~--d  119 (164)
                      +.|+|+|.|+....|| |+++|+|+|+|.+|+ +....|..+  ..+++|++++|.|. ..++|+|.+|++ |||..  .
T Consensus         1 yhYqVtV~~~~~~~~~~t~~~v~i~L~G~~g~-S~~~~l~~~--~~~~~G~t~sfLi~t~~dlG~L~~vk~~W~~n~~~~   77 (137)
T cd01758           1 FHYQLKIHFFNQTNRIETDPTFTISLYGTLGE-SENLPLTLP--EGITGNKTNSFLITTEKDIGDLLMLKLKWEGSSLWS   77 (137)
T ss_pred             CeEEEEEEEecccCCCcccceEEEEEEcCCCc-ccCEEEecC--cccCCCCeEEEEEECCCCcCCEEEEEEEEeCCCCCC
Confidence            4799999999999999 999999999999997 467777654  34699999999995 577899999999 99843  2


Q ss_pred             -Cce------------------eeEEEEEeC-CCCeEEE
Q 031172          120 -GWK------------------PESVKICGQ-NIRTVTF  138 (164)
Q Consensus       120 -~W~------------------~e~V~V~~~-~~~~~~F  138 (164)
                       +|+                  .++|.|+.. +.+++.|
T Consensus        78 ~sW~~~~~~~~~~~~~~~p~l~~~~I~Vk~GEtq~~~~F  116 (137)
T cd01758          78 NSWWTVQTIIPWSGWWRGSGLTIRKIRVKAGETQKKMTF  116 (137)
T ss_pred             hhhhccccccccccccCCCeEEEEEEEEEeCCCccEEEE
Confidence             774                  678888866 5556666

LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.

>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]

Probab=98.71  E-value=1.4e-08  Score=97.57  Aligned_cols=92  Identities=17%  Similarity=0.113  Sum_probs=79.1

Q ss_pred             CeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC--C-C
Q 031172           44 SCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--D-G  120 (164)
Q Consensus        44 ~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~~lG~i~~l~L~hdG~--d-~  120 (164)
                      .-.|.|.|.||  .+.|+.++|-|.+-|+-+. +...-|+  .       ++-.|++....+|-+.-|||.||.+  . -
T Consensus       973 k~~Y~vvIv~~--~g~~~~~~iWi~vsGsl~e-T~~i~~~--~-------n~~~f~F~~kNLG~LtT~rIGHdnS~~~~k 1040 (1295)
T KOG2080|consen  973 KMDYQVVIVTG--SGRGAIPAIWVTVEGSLCS-TPPIMLK--P-------NTPLFKFDHKNLGILSTLRIGHQQSEKPVQ 1040 (1295)
T ss_pred             ccceEEEEEeC--CCCcccCceEEEEecccCC-CCceeeC--C-------CCceeEEeccccceeeeEEecccCCCcchH
Confidence            34599999999  7899999999999999985 4554442  1       4567889999999999999999954  3 9


Q ss_pred             ceeeEEEEEeC-CCCeEEEEcCeecCCC
Q 031172          121 WKPESVKICGQ-NIRTVTFFYNTFIPDG  147 (164)
Q Consensus       121 W~~e~V~V~~~-~~~~~~F~cnrWL~~~  147 (164)
                      |++|+|.|.+. +|++|.|||.||+..|
T Consensus      1041 W~vEyV~vRNEiTG~TYKFPCGrw~G~g 1068 (1295)
T KOG2080|consen 1041 WFLEYVLVRNEITGQTYKFPCGRWFGNG 1068 (1295)
T ss_pred             HHHHHhhhhceeccceeccccccccCCc
Confidence            99999999987 9999999999999877

>cd01759 PLAT_PL PLAT/LH2 domain of pancreatic triglyceride lipase

Probab=98.01  E-value=9.4e-05  Score=55.96  Aligned_cols=90  Identities=13%  Similarity=0.109  Sum_probs=68.5

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEEEEEcCCC-C--c
Q 031172           46 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQYLLRSGSD-G--W  121 (164)
Q Consensus        46 ~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~-~~~lG~i~~l~L~hdG~d-~--W  121 (164)
                      .|+|+|.-+....  ++..++|.|+|.+|++ ....+.   ...|+.|++.+|.+. ..++|+|..|+++.++.- +  |
T Consensus         2 ~Yqv~V~~s~~~~--~~g~~~vsL~G~~g~s-~~~~i~---~g~l~pg~tys~li~~d~dvG~l~~Vkf~W~~~~~n~~~   75 (113)
T cd01759           2 RYKVSVTLSGKKK--VTGTILVSLYGNKGNT-RQYEIF---KGTLKPGNTYSAFIDVDVDVGPLTKVKFIWNNNVINITL   75 (113)
T ss_pred             eEEEEEEEecccc--cCceEEEEEEcCCCCc-cceEEE---eeeecCCCEEEEEEEccCCCCCEEEEEEEEeCCccCCCC
Confidence            5999998776544  8899999999999984 555553   246999999999995 567799999999998641 1  2


Q ss_pred             ---eeeEEEEEeC-CCCeEEEEcCe
Q 031172          122 ---KPESVKICGQ-NIRTVTFFYNT  142 (164)
Q Consensus       122 ---~~e~V~V~~~-~~~~~~F~cnr  142 (164)
                         +.++|.|+.. +++.+.| |.+
T Consensus        76 p~~~~~~I~Vq~Ge~~~~~~F-C~~   99 (113)
T cd01759          76 PKVGAEKITVQSGKDGKVFNF-CSS   99 (113)
T ss_pred             CeEEEEEEEEEeCCCccEEEE-CCC
Confidence               3789999976 5555555 544

Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of triglyceride lipases is in energy production. The proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

>TIGR03230 lipo_lipase lipoprotein lipase

Probab=97.37  E-value=0.0016  Score=59.49  Aligned_cols=95  Identities=15%  Similarity=0.149  Sum_probs=74.0

Q ss_pred             ccccCeeEEEEEEcCCCCC-CcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEEEEEcC
Q 031172           40 VAAKSCSYTVIIKTSCSSK-SYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQYLLRSG  117 (164)
Q Consensus        40 ~~~~~~~Y~V~V~TG~~~~-AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~-~~~lG~i~~l~L~hdG  117 (164)
                      +.-....|+|+|....... .+++..+.|.|+|..|++ ....+.   ...++.|++-+|.+. ..++|++.+|++..++
T Consensus       304 ~Pf~~~~y~v~v~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~---~~~~~~~~t~~~~i~~~~~~g~~~~v~~~w~~  379 (442)
T TIGR03230       304 MPYKVFHYQVKVHFFGKTSLSHTDQPMKISLYGTHGEK-ENIPFT---LPEVSTNKTYSFLITTDVDIGELLMVKLKWEK  379 (442)
T ss_pred             CCceEEEEEEEEEEeccccccccCCcEEEEEEcCCCCc-cceEEe---eeeecCCCeEEEEEecccCCCceEEEEEEEeC
Confidence            4555678999999886544 478899999999999974 444443   246999999999995 4667999999999986


Q ss_pred             CC--Cce---------eeEEEEEeC-CCCeEEE
Q 031172          118 SD--GWK---------PESVKICGQ-NIRTVTF  138 (164)
Q Consensus       118 ~d--~W~---------~e~V~V~~~-~~~~~~F  138 (164)
                      ..  .|.         .++|.|+.. +.+++.|
T Consensus       380 ~~~~~~~~~~~~~~~~~~~i~v~~ge~~~~~~f  412 (442)
T TIGR03230       380 DTYISWSDWWSSPGFHIRKLRIKSGETQSKVIF  412 (442)
T ss_pred             CCcccchhhhcCCceeEEEEEEEeCCCccEEEE
Confidence            53  776         789999966 5566666

Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.

>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins

Probab=82.64  E-value=5.9  Score=30.91  Aligned_cols=52  Identities=12%  Similarity=0.100  Sum_probs=39.7

Q ss_pred             ceeEee--c-CCCCCeEEEEEEEcCCCCceeeEEEEEeC-CCCeEEEEcCeecCCC
Q 031172           96 DTFQIS--G-PCTYDICYQYLLRSGSDGWKPESVKICGQ-NIRTVTFFYNTFIPDG  147 (164)
Q Consensus        96 D~F~v~--~-~~lG~i~~l~L~hdG~d~W~~e~V~V~~~-~~~~~~F~cnrWL~~~  147 (164)
                      ..|.++  . ...|.+=.+.|.-.=..--|+..|++.+. ...+.+|.||.|+...
T Consensus        70 ~~y~~~F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVyp~  125 (137)
T cd01751          70 SAYEAEFEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVYPK  125 (137)
T ss_pred             eEEEEEEEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCccC
Confidence            378764  2 44588888877765566899999999865 4478999999999864

Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	164
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	1e-08
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	7e-05
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	2e-04
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	3e-04

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 24/123 (19%), Positives = 39/123 (31%), Gaps = 8/123 (6%)

Query: 43  KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG 102
               Y + ++T     + T   +S+      G E     LD  +   FES  TDT+  SG
Sbjct: 18  HHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSG 77

Query: 103 PCTYDICYQYLLRSG---SDGWKPESVKICGQNIRTVT-----FFYNTFIPDGVWFGFNQ 154
               +I    L  +G      W    V I   +  T       F    ++   +     +
Sbjct: 78  VDVGEIAMITLKENGFGLKSDWYIAKVIIEKIDEATGFSNKYIFPCYRWVIKQLVVYEGK 137

Query: 155 CRR 157
              
Sbjct: 138 AIL 140

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696

 Score = 41.0 bits (95), Expect = 7e-05
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 11/117 (9%)

Query: 47  YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTY 106
           Y V ++T     + T   I++    A G      +LD     +FE+ S + + + G    
Sbjct: 9   YNVEVETGDREHAGTDATITIRITGAKG-RTDYLKLDKG---SFEAGSKEQYTVQGFDVG 64

Query: 107 DICY------QYLLRSGSDGWKPESVKICG-QNIRTVTFFYNTFIPDGVWFGFNQCR 156
           DI             SG   W    V I      R  +F    ++   +     +  
Sbjct: 65  DIQLIELHSDGGGYWSGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKDMVLFPGEAT 121

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 Length = 370

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 25/125 (20%), Positives = 40/125 (32%), Gaps = 10/125 (8%)

Query: 31  KSFEPKTVQVAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTF 90
                  V          V+IKT+    + T + I        G       LD+P +  F
Sbjct: 242 DVSNKDAVDKDYDLNEIVVMIKTADVQDAGTDNYIYFGIETKDG-VKEEWALDNPGND-F 299

Query: 91  ESCSTDTFQISGPCTY----DICYQYLLRSG----SDGWKPESVKICGQNIRTVTFFYNT 142
                 T+ +          DI   ++        +DGWKP  VK+   +   +    N 
Sbjct: 300 TRNQEGTYTLKLKNKNTKYSDIKNMWIRDEKLTVATDGWKPSYVKVIAGDKVRLEKNINE 359

Query: 143 FIPDG 147
           +I  G
Sbjct: 360 WISGG 364

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A Length = 370

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 10/110 (9%)

Query: 46  SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-- 103
                I TS    + T D +        G +     +D+P +  F + S DT+       
Sbjct: 257 ELVAYISTSGEKDAGTDDYMYFGIKTKDG-KTQEWEMDNPGND-FMTGSKDTYTFKLKDE 314

Query: 104 -CTYDICYQYLLR-----SGSDGWKPESVKICGQNIRTVTFFYNTFIPDG 147
               D      +R     +  D +KPE++KI       V    N +I   
Sbjct: 315 NLKIDDIQNMWIRKRKYTAFPDAYKPENIKIIANGKVVVDKDINEWISGN 364

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	164
3vf1_A	698	11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik	99.95
3v98_A	691	Arachidonate 5-lipoxygenase; dioxygenase, oxidored	99.93
3dy5_A	1066	Allene oxide synthase-lipoxygenase protein; fusion	99.93
3fg1_A	696	Allene oxide synthase-lipoxygenase protein; arichi	99.92
1lox_A	662	15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot	99.91
3cwz_B	384	RAB6IP1, RAB6-interacting protein 1; RAB small GTP	99.9
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	99.9
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	99.89
1bu8_A	452	Protein (pancreatic lipase related protein 2); hyd	99.21
1rp1_A	450	Pancreatic lipase related protein 1; hydrolase, li	99.21
1hpl_A	449	Lipase; hydrolase(carboxylic esterase); 2.30A {Equ	99.11
1gpl_A	432	RP2 lipase; serine esterase, hydrolase, lipid degr	99.09
1w52_X	452	Pancreatic lipase related protein 2; detergent, cl	98.99
2iuj_A	853	Lipoxygenase L-5; dioxygenase, metal-binding, oxid	97.0

>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}

Probab=99.95  E-value=4.7e-28  Score=226.17  Aligned_cols=116  Identities=20%  Similarity=0.194  Sum_probs=103.2

Q ss_pred             cccCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC--
Q 031172           41 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--  118 (164)
Q Consensus        41 ~~~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~~lG~i~~l~L~hdG~--  118 (164)
                      ..++|.|+|+|+||++++|||||+|+|+|+|++|+++....|+++++++||||++|+|.+++.++|+|++|+||||+.  
T Consensus        16 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~~S~~~~L~~~~~~~FeRGs~D~F~v~~~~LG~L~~IrI~hDnsG~   95 (698)
T 3vf1_A           16 HHHHMKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSGVDVGEIAMITLKENGFGL   95 (698)
T ss_dssp             ---CEEEEEEEEECSCCCSCSBCCEEEEEEETTSCBCCCEEECCBCSSSSCCCCEEEEEEEECCCSSEEEEEEEECCCSS
T ss_pred             CCCcceEEEEEEECCCCCCCCCceeEEEEEECCCCeecceEeCCCCCCccccCCeeEEEEEecccCCceEEEEEECCCCC
Confidence            667999999999999999999999999999999974688899999999999999999999889999999999999964  


Q ss_pred             -CCceeeEEEEEeC-C----CCeEEEEcCeecCCCceeeecCCC
Q 031172          119 -DGWKPESVKICGQ-N----IRTVTFFYNTFIPDGVWFGFNQCR  156 (164)
Q Consensus       119 -d~W~~e~V~V~~~-~----~~~~~F~cnrWL~~~~~~~~~~C~  156 (164)
                       ++|||++|+|+++ +    ++.+.|||+|||+.++......|-
T Consensus        96 ~~~Wfl~~V~V~~~~t~~~~g~~~~Fpc~rWL~~d~~l~~G~a~  139 (698)
T 3vf1_A           96 KSDWYIAKVIIEKIDEATGFSNKYIFPCYRWVIKQLVVYEGKAI  139 (698)
T ss_dssp             BCCCEEEEEEEEEECTTTCCEEEEEEEEEEECSSEEEEECSSCC
T ss_pred             CCCeEEeEEEEEcCCCCCCCCcEEEEEhhhcccCCcEecCCcee
Confidence             3999999999988 4    789999999999998666555554

>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B

Probab=99.93  E-value=5.6e-26  Score=211.97  Aligned_cols=110  Identities=19%  Similarity=0.213  Sum_probs=94.4

Q ss_pred             cccCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC-
Q 031172           41 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS-  118 (164)
Q Consensus        41 ~~~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~-~~lG~i~~l~L~hdG~-  118 (164)
                      ..++|.|+|+|+||++++|||||+|+|+|+|++|+ +....|++   ++||||++|+|.++. .++|+|++|+||||+. 
T Consensus        18 ~~~~~~Y~V~V~TG~~~~AGTda~V~I~L~G~~G~-S~~~~L~~---~~FeRG~~D~F~v~~~~~LG~L~~IrI~hDnsG   93 (691)
T 3v98_A           18 GSHMPSYTVTVATGSQEHAGTDDYIYLSLVGSAGC-SEKHLLDK---GSFERGAVDSYDVTVDEELGEIQLVRIEKRKYG   93 (691)
T ss_dssp             -----CEEEEEEECCSTTCCBCSEEEEEEEESSCB-CCCEECCS---SCBCTTCEEEEEECCSSCCCSEEEEEEEEECSS
T ss_pred             CCCceeEEEEEEECCCCCCCCCceeEEEEEECCCc-eeeEEecC---CcccCCCeeEEEEEeccCCCCceEEEEEECCCC
Confidence            78899999999999999999999999999999997 57788976   899999999999988 6679999999999954 


Q ss_pred             --CCceeeEEEEEeCCCCeEEEEcCeecCCC--ceeeecC
Q 031172          119 --DGWKPESVKICGQNIRTVTFFYNTFIPDG--VWFGFNQ  154 (164)
Q Consensus       119 --d~W~~e~V~V~~~~~~~~~F~cnrWL~~~--~~~~~~~  154 (164)
                        ++|||++|+|+++.++.+.|||+|||+.+  +......
T Consensus        94 ~~~~Wfl~~V~V~~~~g~~~~Fpc~rWL~~d~~l~l~~g~  133 (691)
T 3v98_A           94 SNDDWYLKYITLKTPHGDYIEFPCYRWITGDVEVVLRDGR  133 (691)
T ss_dssp             SCCCEEEEEEEEECTTSCEEEEEEEEEECSSSCEEEECSS
T ss_pred             CCCCeEEeEEEEECCCCcEEEEehHHhcCCCCEEEEcCCc
Confidence              39999999999988899999999999987  4444333

>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}

Probab=99.93  E-value=7.1e-26  Score=219.12  Aligned_cols=115  Identities=20%  Similarity=0.241  Sum_probs=94.9

Q ss_pred             cccCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC--
Q 031172           41 AAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS--  118 (164)
Q Consensus        41 ~~~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~~lG~i~~l~L~hdG~--  118 (164)
                      ...++.|+|+|+||++++|||||+|+|+|+|++|+ +....|+++++++||||++|+|.+++.++|+|++|+||||+.  
T Consensus       370 ~~~~~~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~-S~~~~L~~~~~~~FeRGs~d~F~v~~~~LG~L~~IrI~hDnsG~  448 (1066)
T 3dy5_A          370 AGQNAIYNVEVETGDREHAGTDATITIRITGAKGR-TDYLKLDKWFHNDFEAGSKEQYTVQGFDVGDIQLIELHSDGGGY  448 (1066)
T ss_dssp             ---CCEEEEEEEECCSTTCCCCSCCEEEEEESSCB-CCCEEC-------CCTTCEEEEEEECSCCSSEEEEEEECCCCC-
T ss_pred             ccCceeEEEEEEECCCCCCCCCceeEEEEEECCCc-eeeEEeCCCCcCccccCCcceEEEEEecCCCceEEEEEECCCCC
Confidence            45689999999999999999999999999999997 578899999989999999999999887789999999999943  


Q ss_pred             ----CCceeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCCC
Q 031172          119 ----DGWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQCR  156 (164)
Q Consensus       119 ----d~W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C~  156 (164)
                          ++|||++|+|+++ +++.+.|||+|||+.++......|-
T Consensus       449 ~~~~~~Wfl~~V~V~~~~tg~~~~Fpc~rWL~~d~~lr~G~a~  491 (1066)
T 3dy5_A          449 WSGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKDMVLFPGEAT  491 (1066)
T ss_dssp             -CCCCCEEEEEEEEEESSSSSCEEEEEEEEESSEEEECCSSCC
T ss_pred             CCCCCCeEEeEEEEEeCCCCCEEEEehhhhccCCeEeccCcee
Confidence                3999999999998 6999999999999998555544443

>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A

Probab=99.92  E-value=4.3e-25  Score=206.16  Aligned_cols=110  Identities=21%  Similarity=0.252  Sum_probs=97.5

Q ss_pred             ccCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC---
Q 031172           42 AKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS---  118 (164)
Q Consensus        42 ~~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~~lG~i~~l~L~hdG~---  118 (164)
                      ++..-|.|+|+||++++|||||+|+|+|+|++|. +....|++   ++||||++|+|.+++.++|+|++|+||||+.   
T Consensus         4 ~~~~~~~~~V~TG~~~~AGTda~V~I~L~G~~G~-S~~~~L~~---~~FeRGs~d~F~v~~~dLG~L~~IrI~hDnsg~G   79 (696)
T 3fg1_A            4 HHHAIYNVEVETGDREHAGTDATITIRITGAKGR-TDYLKLDK---GSFEAGSKEQYTVQGFDVGDIQLIELHSDGGGYW   79 (696)
T ss_dssp             -CEEEEEEEEEECSSTTCCBCSCEEEEEEETTEE-CCCEEECS---SCBCTTCEEEEEEEEECCSSEEEEEEEECCCCTT
T ss_pred             cccceeeEEEEeCCCCCCCCCceeEEEEEECCCc-eeeEEeCC---CCcCCCCccEEEEEEccCCCceEEEEEECCcCCC
Confidence            4567899999999999999999999999999996 57888976   8999999999999887789999999999955   


Q ss_pred             --C-CceeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031172          119 --D-GWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  155 (164)
Q Consensus       119 --d-~W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  155 (164)
                        + +|||++|+|+++ +++.+.|||+|||+.++......|
T Consensus        80 ~~~~~Wf~~~V~V~~~~tg~~~~Fpc~rWL~~dl~lreG~a  120 (696)
T 3fg1_A           80 SGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKDMVLFPGEA  120 (696)
T ss_dssp             CSCCCEEEEEEEEEETTCSSCEEEEEEEEESSEEEECCSSC
T ss_pred             CCCCCeEeeEEEEEeCCCCcEEEeEhhhhccCCeEecCcce
Confidence              4 999999999999 699999999999999855444443

>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*

Probab=99.91  E-value=3.5e-24  Score=199.13  Aligned_cols=95  Identities=14%  Similarity=0.144  Sum_probs=86.8

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC---CCc
Q 031172           46 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS---DGW  121 (164)
Q Consensus        46 ~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~-~~lG~i~~l~L~hdG~---d~W  121 (164)
                      .|+|+|+||++++|||||+|+|+|+|++|+ +....|+     +||||++|+|.+.. .++|+|++|+||||+.   ++|
T Consensus         2 ~Y~V~V~TG~~~~AGTda~V~i~L~G~~G~-s~~~~L~-----~FerG~~d~F~v~~~~dlG~l~~I~I~~d~~g~~~~W   75 (662)
T 1lox_A            2 VYRVCVSTGASIYAGSKNKVELWLVGQHGE-VELGSCL-----RPTRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAW   75 (662)
T ss_dssp             EEEEEEEECCSTTCCCSSEEEEEEEESSCE-EEEEEEE-----CCCTTCEEEEEEECSSCCCSEEEEEEEEECSSSCCCE
T ss_pred             eEEEEEEECCCcCCCcCCcEEEEEEECCCC-ccCeeCC-----CcCCCCccEEEEEecCCCCcceEEEEEeCCCCCCCCc
Confidence            699999999999999999999999999997 4667785     89999999999987 4559999999999965   499


Q ss_pred             eeeEEEEEeCC--CCeEEEEcCeecCC
Q 031172          122 KPESVKICGQN--IRTVTFFYNTFIPD  146 (164)
Q Consensus       122 ~~e~V~V~~~~--~~~~~F~cnrWL~~  146 (164)
                      ||++|+|+++.  ++.+.|+|||||+.
T Consensus        76 fl~~V~V~~p~~~g~~~~F~Cn~WL~~  102 (662)
T 1lox_A           76 FCNWISVQALGAAEDKYWFPCYRWVVG  102 (662)
T ss_dssp             EEEEEEEEESSSCCCCEEEEEEEEECS
T ss_pred             EEeEEEEecCCCCCcEEEEEeceEecC
Confidence            99999999985  77799999999997

>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus}

Probab=99.90  E-value=8.8e-24  Score=186.01  Aligned_cols=97  Identities=13%  Similarity=0.121  Sum_probs=86.8

Q ss_pred             cccCeeEEEEEEcCCCCC-CcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecCCCCCeEEEEEEEcCC-
Q 031172           41 AAKSCSYTVIIKTSCSSK-SYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTYDICYQYLLRSGS-  118 (164)
Q Consensus        41 ~~~~~~Y~V~V~TG~~~~-AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~~lG~i~~l~L~hdG~-  118 (164)
                      ...++.|+|+|+||++.+ |||||+|+|+|+|++|+ +..+.|+++         .|.|.++..++|+|++|+||||+. 
T Consensus       244 Ttt~~~Y~V~V~TG~~~gaAGT~anV~I~L~G~~G~-S~~~~L~~~---------~d~F~v~~~~LG~L~~I~I~HDnsG  313 (384)
T 3cwz_B          244 TTILIPYHILIVPSKKLGGSMFTANPWICISGELGE-TQILQIPRN---------VLEMTFECQNLGKLTTVQIGHDNSG  313 (384)
T ss_dssp             TTSEEEEEEEEEECCCCCSCCCCSCEEEEEEESSCB-CCCEECCTT---------CCEEEEEEECCCSEEEEEEEECCCS
T ss_pred             cccceeEEEEEEeCCCCCCCCCCCcEEEEEEeCCCC-cccEEeccc---------CceEEEecccCCCceEEEEEECCCC
Confidence            456789999999999998 69999999999999997 467778653         689999988999999999999954 


Q ss_pred             -C-CceeeEEEEEeC-CCCeEEEEcCeecCCC
Q 031172          119 -D-GWKPESVKICGQ-NIRTVTFFYNTFIPDG  147 (164)
Q Consensus       119 -d-~W~~e~V~V~~~-~~~~~~F~cnrWL~~~  147 (164)
                       + +|||++|+|+++ +++.+.|||+|||+.+
T Consensus       314 ~~p~Wfl~~V~V~d~~tg~~~~Fpc~rWL~~d  345 (384)
T 3cwz_B          314 LYAKWLVECVMVRNEVTGHTYKFPCGRWLGKG  345 (384)
T ss_dssp             SCCCEEEEEEEEEETTTCCEEEEEEEEEESTT
T ss_pred             CCCceeEeEEEEEeCCCCcEEEEECceeCCCC
Confidence             3 999999999998 7899999999999965

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A

Probab=99.90  E-value=5e-23  Score=180.38  Aligned_cols=106  Identities=22%  Similarity=0.242  Sum_probs=93.7

Q ss_pred             cCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeec---CC-CCCeEEEEEEEcCC
Q 031172           43 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG---PC-TYDICYQYLLRSGS  118 (164)
Q Consensus        43 ~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~---~~-lG~i~~l~L~hdG~  118 (164)
                      .--.|+|+|+||+..+|||+++|+|.|+|.+|.+ ....||+++ ++||||++|+|.|..   +. +|+|..|+|+++..
T Consensus       254 ~~~~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges-~~~~LD~~g-ndFe~G~~d~y~v~~~~~~~~lg~l~~v~l~K~~~  331 (370)
T 2wxu_A          254 NVKELVAYISTSGEKDAGTDDYMYFGIKTKDGKT-QEWEMDNPG-NDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKY  331 (370)
T ss_dssp             CCCEEEEEEEECCSTTCSCCSEEEEEEEETTCCE-EEEECCCSS-CTTCTTCEEEEEEECSCTTCCGGGEEEEEEEEECS
T ss_pred             cceeEEEEEEcCCcccCCCcceEEEEEEcCCCcc-chhhhhCcC-CCcCCCCeeeEEEecCCCccCcCceEEEEEEccCC
Confidence            3456999999999999999999999999999974 666799965 999999999999976   44 49999999999854


Q ss_pred             ----CCceeeEEEEEeCCCCeEEEEcCeecCCCcee
Q 031172          119 ----DGWKPESVKICGQNIRTVTFFYNTFIPDGVWF  150 (164)
Q Consensus       119 ----d~W~~e~V~V~~~~~~~~~F~cnrWL~~~~~~  150 (164)
                          |+|||++|+|+.|.+..+.|||||||.++.-+
T Consensus       332 ~~~~D~Wfc~~i~V~~p~~~~~~FP~y~Wi~g~~~~  367 (370)
T 2wxu_A          332 TAFPDAYKPENIKIIANGKVVVDKDINEWISGNSTY  367 (370)
T ss_dssp             SSSCCCBCEEEEEEEETTEEEEEEECCSCBCTTCEE
T ss_pred             CCCCccceeeeEEEEcCCCcEEEeccceeeeCCeEE
Confidence                79999999999999888999999999876443

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3

Probab=99.89  E-value=9.4e-23  Score=178.65  Aligned_cols=106  Identities=23%  Similarity=0.272  Sum_probs=93.9

Q ss_pred             cCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeec----CCCCCeEEEEEEEcCC
Q 031172           43 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG----PCTYDICYQYLLRSGS  118 (164)
Q Consensus        43 ~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~----~~lG~i~~l~L~hdG~  118 (164)
                      .--.|.|+|+||+..+|||+++|+|.|+|.+|.+ ....||+++ ++||||++|+|.|..    ..+|+|..|+|++...
T Consensus       254 ~~n~y~V~V~Tg~~~~AGT~~~V~~~lvg~~Ges-~~~~LD~~g-ndFe~G~~d~y~v~~~~~~~dlg~l~~v~l~K~~~  331 (370)
T 1olp_A          254 DLNEIVVMIKTADVQDAGTDNYIYFGIETKDGVK-EEWALDNPG-NDFTRNQEGTYTLKLKNKNTKYSDIKNMWIRDEKL  331 (370)
T ss_dssp             CCSEEEEEEEECSSTTCCCCSEEEEEEEETTCCE-EEEECCCSS-CCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECS
T ss_pred             ccceEEEEEEcCCcccCCCcceEEEEEEcCCCcc-chhhhhCcC-CccCCCCeeEEEEeccCCcCCcCceEEEEEEcCCC
Confidence            3456999999999999999999999999999974 666799965 999999999999977    4459999999988854


Q ss_pred             ----CCceeeEEEEEeCCCCeEEEEcCeecCCCcee
Q 031172          119 ----DGWKPESVKICGQNIRTVTFFYNTFIPDGVWF  150 (164)
Q Consensus       119 ----d~W~~e~V~V~~~~~~~~~F~cnrWL~~~~~~  150 (164)
                          |+|||++|+|+.|.+..+.|||||||.++.-+
T Consensus       332 ~~~~D~Wfc~~i~V~~p~~~~~~FP~y~Wi~g~~~~  367 (370)
T 1olp_A          332 TVATDGWKPSYVKVIAGDKVRLEKNINEWISGGTTY  367 (370)
T ss_dssp             SSSCCEECEEEEEEEETTEEEEEEECCSCEETTEEE
T ss_pred             CCCCccceeeeEEEEcCCCcEEEeccceeeeCceEE
Confidence                79999999999999888999999999876443

>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*

Probab=99.21  E-value=6.1e-11  Score=104.87  Aligned_cols=110  Identities=12%  Similarity=0.071  Sum_probs=90.2

Q ss_pred             ccccCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEE-EEEcC
Q 031172           40 VAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQY-LLRSG  117 (164)
Q Consensus        40 ~~~~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~-~~~lG~i~~l~-L~hdG  117 (164)
                      ..-....|+|+|+|+.  .++|+++|.|+|+|++|++ ....|.++   .||+|++++|.+. ..++|+|.+|+ +||+.
T Consensus       335 ~Pf~~~~Y~v~V~~~~--~~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~  408 (452)
T 1bu8_A          335 GNFTRWRYKVSVTLSG--AKKLSGYILVALYGNNGNS-KQYEIFKG---SLKPEARHVRDIDVDINVGEIQKVKFLWNNK  408 (452)
T ss_dssp             TTCCCEEEEEEEEEEC--SSCEEEEEEEEEEETTEEC-CCEEEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEC-
T ss_pred             CCCcceeeEEEEEEcC--CCceeeEEEEEEEcCCCCc-ceEEeccc---ccCCCCEEEEEEeCCCCCCCceEEEEEEECC
Confidence            4556778999999965  5799999999999999974 45556433   5999999999995 57789999999 89983


Q ss_pred             -----CCCceeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031172          118 -----SDGWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  155 (164)
Q Consensus       118 -----~d~W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  155 (164)
                           ...|++++|+|++. +++++.|=+++|+.+++-....-|
T Consensus       409 ~~~~~~p~~~i~~I~V~~~e~~~~~~FC~~~~~~~~~~~~~~~~  452 (452)
T 1bu8_A          409 VINLFRPTLGASQITVQSGVDGKEYNFCSSDTVREDVLQSLYPC  452 (452)
T ss_dssp             -----CCCBEEEEEEEEETTTCCEEEEECCCCBCTTCCEEEEEC
T ss_pred             CCCCCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence                 24999999999987 788899999999998866555444

>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A

Probab=99.21  E-value=4.7e-11  Score=106.06  Aligned_cols=109  Identities=13%  Similarity=0.070  Sum_probs=90.3

Q ss_pred             ccccCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEE-EEEcC
Q 031172           40 VAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQY-LLRSG  117 (164)
Q Consensus        40 ~~~~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~-~~~lG~i~~l~-L~hdG  117 (164)
                      ..-....|+|+|+|+.   ++|+++|.|+|+|++|++ ....|.++   .||+|++++|.+. ..++|+|.+|+ +|++.
T Consensus       334 ~Pf~~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~t~s~li~~~~dlG~l~~v~~~W~~~  406 (450)
T 1rp1_A          334 SNFARWRYGVSITLSG---KRATGQAKVALFGSKGNT-HQFNIFKG---ILKPGSTHSNEFDAKLDVGTIEKVKFLWNNN  406 (450)
T ss_dssp             SCCCCEEEEEEEEEEE---SCEEEEEEEEEEETTEEC-CCEEEEEE---EECTTCEEEEEEEESSCCSSEEEEEEEEEEC
T ss_pred             CCcccceeEEEEEEcC---CceeEEEEEEEEcCCCCc-ceEEeccc---ccCCCCEEEEEEECCCCCCCceEEEEEEECC
Confidence            4555778999999997   899999999999999974 55556433   6999999999995 56789999999 78873


Q ss_pred             -----CCCceeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031172          118 -----SDGWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  155 (164)
Q Consensus       118 -----~d~W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  155 (164)
                           ...|++++|+|++. +++++.|=+++|+.+++-....-|
T Consensus       407 ~~~~~~p~~~i~~I~V~~~e~~~~~~FC~~~~~~~~~~~~~~~~  450 (450)
T 1rp1_A          407 VVNPTFPKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLTPC  450 (450)
T ss_dssp             --CTTCCCEEEEEEEEEETTCSSCEEEECSCEECTTCCEEEEEC
T ss_pred             CCCCCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence                 24999999999987 778899999999998876555444

>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19

Probab=99.11  E-value=2.3e-10  Score=101.60  Aligned_cols=99  Identities=9%  Similarity=-0.014  Sum_probs=80.5

Q ss_pred             ccccCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEE-EEEcC
Q 031172           40 VAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQY-LLRSG  117 (164)
Q Consensus        40 ~~~~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~-~~~lG~i~~l~-L~hdG  117 (164)
                      ..-....|+|+|+|+.   ++|+++|.|+|+|++|++ ....|.++   .||+|++++|.+. ..++|+|.+|+ +||+.
T Consensus       334 ~Pf~~~~Y~VtV~~~~---~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~  406 (449)
T 1hpl_A          334 SNFARWRYRVDVTLSG---KKVTGHVLVSLFGNKGNS-RQYEIFQG---TLKPDNTYSNEFDSDVEVGDLEKVKFIWYNN  406 (449)
T ss_dssp             SSCCCEEEEEEEEEEE---CCEEEEEEEEEEETTEEC-CCEEEEEE---EECSSCEEEEEEEESSCCCSEEEEEEEEEEC
T ss_pred             CCcccceeEEEEEEcC---CceeEEEEEEEEcCCCCc-eeEEeccc---ccCCCcEEEEEEeCCCCCCCceEEEEEEECC
Confidence            4556778999999997   899999999999999974 45566443   6999999999995 57789999999 88883


Q ss_pred             -----CCCceeeEEEEEeCCCCeEEEEcCeecCC
Q 031172          118 -----SDGWKPESVKICGQNIRTVTFFYNTFIPD  146 (164)
Q Consensus       118 -----~d~W~~e~V~V~~~~~~~~~F~cnrWL~~  146 (164)
                           ...|++++|+|++.+++++.| |++|+-.
T Consensus       407 ~~~~~~p~~~i~~I~V~~e~~~~~~f-C~~~~~~  439 (449)
T 1hpl_A          407 VINLTLPKVGASKITVERNDGSVFNF-CSEETVR  439 (449)
T ss_dssp             SCCTTCCCEEEEEEEEECTTSCEEEE-ECCCCBC
T ss_pred             CCCCCCCeEEEEEEEEEeCCCCeeee-cCCCccc
Confidence                 249999999999933445555 9999764

>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A

Probab=99.09  E-value=4.3e-10  Score=98.45  Aligned_cols=106  Identities=11%  Similarity=0.029  Sum_probs=83.8

Q ss_pred             ccccCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEE-EEEcC
Q 031172           40 VAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQY-LLRSG  117 (164)
Q Consensus        40 ~~~~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~-~~~lG~i~~l~-L~hdG  117 (164)
                      ..-....|+|+|+|+.   ++|+++|.|+|+|++|++ ....|.++   .||+|++++|.+. ..++|+|.+|+ +||+.
T Consensus       317 ~pf~~~~Y~v~v~~~~---~~~~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~~lG~l~~v~~~W~~~  389 (432)
T 1gpl_A          317 DNFTRWRYKVSVTLSG---KKVTGHILVSLFGNKGNS-KQYEIFKG---TLKPDSTHSNEFDSDVDVGDLQMVKFIWYNN  389 (432)
T ss_dssp             TTCCCEEEEEEEEEEE---CCEEEEEEEEEEESSCEE-EEEEEEEE---EECTTCEEEEEEEESSCCCSEEEEEEEEEES
T ss_pred             CCCccceeEEEEEEcC---CceeEEEEEEEEcCCCCc-eeEEeccc---ccCCCcEEEEEEeCCCCCCCceEEEEEEEcC
Confidence            4555778999999997   899999999999999974 55666543   5999999999995 57789999999 88883


Q ss_pred             -----CCCceeeEEEEEeCCCCeEEEEcCe-ecCCCceeeec
Q 031172          118 -----SDGWKPESVKICGQNIRTVTFFYNT-FIPDGVWFGFN  153 (164)
Q Consensus       118 -----~d~W~~e~V~V~~~~~~~~~F~cnr-WL~~~~~~~~~  153 (164)
                           ...|++++|+|++...+. .|.|.+ .+.+++-....
T Consensus       390 ~~~~~~~~~~i~~I~v~~~e~~~-~~fC~~~~~~~~~~~~~~  430 (432)
T 1gpl_A          390 VINPTLPRVGASKIIVETNVGKQ-FNFCSPETVREEVLLTLT  430 (432)
T ss_dssp             SCCTTCCEEEEEEEEEECTTSCE-EEEECSCCEETTCCEEEE
T ss_pred             CCCCCCCeEEEEEEEEEeCCCCC-ceecCCCccccCceeccc
Confidence                 149999999999885545 777854 55566544433

>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}

Probab=98.99  E-value=4.7e-11  Score=105.63  Aligned_cols=110  Identities=12%  Similarity=0.077  Sum_probs=90.3

Q ss_pred             ccccCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEee-cCCCCCeEEEE-EEEcC
Q 031172           40 VAAKSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQIS-GPCTYDICYQY-LLRSG  117 (164)
Q Consensus        40 ~~~~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~-~~~lG~i~~l~-L~hdG  117 (164)
                      ..-....|+|+|+|+.  .++|+++|.|+|+|++|++ ....|.++   .||+|++++|.+. ..++|+|.+|+ +||+.
T Consensus       335 ~Pf~~~~Y~v~v~~~~--~~~t~g~i~v~L~G~~g~s-~~~~l~~~---~~~~g~~~s~li~~~~dlG~l~~v~~~W~~~  408 (452)
T 1w52_X          335 GDYTSWRYRVSITLAG--SGKANGYLKVTLRGSNGNS-KQYEIFKG---SLQPDSSYTLDVDVNFIIGKIQEVKFVWNKT  408 (452)
T ss_dssp             TTCCCEEEEECCBCCS--SSCCEECBCCCBCCSSCCC-CCCCCCCE---ECCSSCCCCEEEEESSCCCCCCCBCCCBCCS
T ss_pred             CCccceeeEEEEEEcC--CcceeeEEEEEEEcCCCCc-ceEecccc---ccCCCCEEEEEEECCCCCCCceEEEEEEECC
Confidence            4555778999999985  5799999999999999985 55566543   6999999999995 57789999999 88873


Q ss_pred             -----CCCceeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031172          118 -----SDGWKPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  155 (164)
Q Consensus       118 -----~d~W~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  155 (164)
                           ...|++++|+|++. +++++.|=+++|+.+++-....-|
T Consensus       409 ~~~~~~~~~~i~~I~V~~~e~~~~~~fC~~~~~~~~~~~~~~~~  452 (452)
T 1w52_X          409 VLNLSKPQLGASRITVQSGADGTEYKFCGSGTVQDNVEQSLYPC  452 (452)
T ss_dssp             SCCSCCCCCCCSBCCCCBSSSCCCCCEECCSCCCSSCCCCCEEC
T ss_pred             CCCCCCCeEEEEEEEEEeCCCCCeEEecCCCccccCceecccCC
Confidence                 24999999999987 778899999999998865544433

>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}

Probab=97.00  E-value=0.0053  Score=58.77  Aligned_cols=82  Identities=13%  Similarity=0.077  Sum_probs=55.1

Q ss_pred             eEEEEEeeC----CCC--eeEEEcCCCcCCC-cccCCCcceeEe--ec-CCCCCeEEEEEEEcCCCCceeeEEEEEe-CC
Q 031172           64 KISLAFGDA----YGN--EVYIKRLDDPYSR-TFESCSTDTFQI--SG-PCTYDICYQYLLRSGSDGWKPESVKICG-QN  132 (164)
Q Consensus        64 ~VsI~l~G~----~G~--~s~~~~Ld~~~~~-~FErGsvD~F~v--~~-~~lG~i~~l~L~hdG~d~W~~e~V~V~~-~~  132 (164)
                      +|++.|+.+    .|.  .+....|++..+. ..+.| ...|.+  .. ..+|++-.++|.....+.|||++|+|++ |.
T Consensus        55 ~v~lqlvs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~f~~~~~~G~~gav~v~n~~~~e~fl~~i~l~~~p~  133 (853)
T 2iuj_A           55 SISIQLISATKADGGKGKVGKATNLRGKITLPTIGAK-EEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPN  133 (853)
T ss_dssp             SEEEEEEEEEEESSSSEEEEEEEECCCCCCCSSCCTT-EEEEEEEEECCSSSCCEEEEEEEECSSSCEEEEEEEECCCTT
T ss_pred             eEEEEEEEeeeCCCCCcccCCccccccccCCCCCCCC-ceEEEEEeeccccCCCceEEEEEecCCccceEeEEEEeecCC
Confidence            477766544    343  1224455543221 12333 457888  43 4559999999977667899999999987 55


Q ss_pred             -CCeEEEEcCeecCCC
Q 031172          133 -IRTVTFFYNTFIPDG  147 (164)
Q Consensus       133 -~~~~~F~cnrWL~~~  147 (164)
                       +. ++||||+|+...
T Consensus       134 ~g~-~~F~c~sWv~~~  148 (853)
T 2iuj_A          134 HGT-IHFICNSWVYNS  148 (853)
T ss_dssp             SCC-EEEEEEEEECBT
T ss_pred             CCc-EEEEecccccCC
Confidence             55 889999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	164
d2p0ma2	111	b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Orycto	0.003

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 111

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 33.5 bits (76), Expect = 0.003
 Identities = 14/101 (13%), Positives = 27/101 (26%), Gaps = 12/101 (11%)

Query: 47  YTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPCTY 106
           Y V + T  S  + +++K+ L     +G                     + F+++     
Sbjct: 3   YRVCVSTGASIYAGSKNKVELWLVGQHGEVELGSC------LRPTRNKEEEFKVNVSKYL 56

Query: 107 DICYQYLLRSG----SDGWKPESVKIC--GQNIRTVTFFYN 141
                  LR       D W    + +   G       F   
Sbjct: 57  GSLLFVRLRKKHFLKEDAWFCNWISVQALGAAEDKYWFPCY 97

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	164
d1olpa2	121	Alpha-toxin, C-terminal domain {Clostridium absonu	99.96
d1ca1a2	121	Alpha-toxin, C-terminal domain {Clostridium perfri	99.96
d2p0ma2	111	15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T	99.96
d1rp1a1	113	Pancreatic lipase, C-terminal domain {Dog (Canis f	99.88
d1bu8a1	114	Pancreatic lipase, C-terminal domain {Rat (Rattus	99.87
d1gpla1	112	Pancreatic lipase, C-terminal domain {Guinea pig (	99.78
d3bnea2	143	Plant lipoxigenase {Soybean (Glycine max), isozyme	85.58

>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium absonum [TaxId: 29369]

Probab=99.96  E-value=2.6e-29  Score=187.34  Aligned_cols=107  Identities=21%  Similarity=0.247  Sum_probs=94.7

Q ss_pred             cCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecCC----CCCeEEEEEEEcC-
Q 031172           43 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC----TYDICYQYLLRSG-  117 (164)
Q Consensus        43 ~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~~----lG~i~~l~L~hdG-  117 (164)
                      +...|.|+|+||+.++|||+|+|+|+|+|++|+ +....|+++. +.||||++|+|.+..++    +|+|.+|+|+||+ 
T Consensus         5 ~~~~~~V~v~Tg~~~~AGT~a~V~i~l~G~~g~-s~~~~L~~~~-~~Ferg~~d~F~v~~~d~~~~lG~i~~i~i~hd~~   82 (121)
T d1olpa2           5 DLNEIVVMIKTADVQDAGTDNYIYFGIETKDGV-KEEWALDNPG-NDFTRNQEGTYTLKLKNKNTKYSDIKNMWIRDEKL   82 (121)
T ss_dssp             CCSEEEEEEEECSSTTCCCCSEEEEEEEETTCC-EEEEECCCSS-CCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECS
T ss_pred             cccEEEEEEEECCCCCCCCcceEEEEEEECCCC-cccEEecCCC-cccccCCeEEEEEEeCCccCCcCceEEEEEEEcCC
Confidence            456799999999999999999999999999996 5778898875 89999999999998654    6999999999993 


Q ss_pred             -C-C-CceeeEEEEEeCCCCeEEEEcCeecCCCceee
Q 031172          118 -S-D-GWKPESVKICGQNIRTVTFFYNTFIPDGVWFG  151 (164)
Q Consensus       118 -~-d-~W~~e~V~V~~~~~~~~~F~cnrWL~~~~~~~  151 (164)
                       . + +|||++|+|..++++.+.|+|||||.++..|.
T Consensus        83 g~~~~~W~l~~V~v~~~~~~~~~F~~nrWl~~~~~~~  119 (121)
T d1olpa2          83 TVATDGWKPSYVKVIAGDKVRLEKNINEWISGGTTYT  119 (121)
T ss_dssp             SSSCCEECEEEEEEEETTEEEEEEECCSCEETTEEEE
T ss_pred             CCCCcceeEEEEEEECCCCeEEEEECCEEECCCcEEE
Confidence             2 3 69999999987778899999999999986653

>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Alpha-toxin, C-terminal domain
domain: Alpha-toxin, C-terminal domain
species: Clostridium perfringens, different strains [TaxId: 1502]

Probab=99.96  E-value=3.9e-29  Score=186.49  Aligned_cols=107  Identities=21%  Similarity=0.234  Sum_probs=95.4

Q ss_pred             cCeeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecCC----CCCeEEEEEEEcCC
Q 031172           43 KSCSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGPC----TYDICYQYLLRSGS  118 (164)
Q Consensus        43 ~~~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~~----lG~i~~l~L~hdG~  118 (164)
                      +.-.|.|.|+||+.++|||||+|+|+|+|++|+ +....|+++. ++||||++|+|.+..++    +|+|.+|+|+||+.
T Consensus         5 ~~~~~~v~V~TG~~~~AGTda~V~i~l~G~~G~-s~~~~L~~~~-~~Ferg~~d~F~v~~~d~~~~lG~i~ki~i~hd~~   82 (121)
T d1ca1a2           5 NVKELVAYISTSGEKDAGTDDYMYFGIKTKDGK-TQEWEMDNPG-NDFMTGSKDTYTFKLKDENLKIDDIQNMWIRKRKY   82 (121)
T ss_dssp             CCCEEEEEEEECCSTTCCCCSEEEEEEEETTSC-EEEEECCCSS-SCSCTTCEEEEEEECSCSSCCGGGEEEEEEEEECS
T ss_pred             cceeEEEEEEeCCCCCCCCCCeEEEEEEeCCCC-eeeEEecCCC-ccccCCcEEEEEEEeCCcCCCcCCceEEEEEEcCc
Confidence            455799999999999999999999999999996 5788998876 78999999999998754    79999999999943


Q ss_pred             ----CCceeeEEEEEeCCCCeEEEEcCeecCCCceee
Q 031172          119 ----DGWKPESVKICGQNIRTVTFFYNTFIPDGVWFG  151 (164)
Q Consensus       119 ----d~W~~e~V~V~~~~~~~~~F~cnrWL~~~~~~~  151 (164)
                          ++|||++|+|..++++.+.|+|||||+++..|-
T Consensus        83 g~~~~~W~l~~V~v~~~~~~~~~F~~nrWl~~~~~~~  119 (121)
T d1ca1a2          83 TAFPDAYKPENIKVIANGKVVVDKDINEWISGNSTYN  119 (121)
T ss_dssp             SSSCCCBCEEEEEEEETTEEEEEEECCSCBCSSCEEE
T ss_pred             cccCchhheEEEEEECCCCeEEEeECCEEECCCCEEe
Confidence                479999999987788899999999999987663

>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: 15-Lipoxygenase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=1.4e-28  Score=180.19  Aligned_cols=96  Identities=14%  Similarity=0.144  Sum_probs=85.9

Q ss_pred             eEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeecC-CCCCeEEEEEEEcCC---CCc
Q 031172           46 SYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISGP-CTYDICYQYLLRSGS---DGW  121 (164)
Q Consensus        46 ~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~~-~lG~i~~l~L~hdG~---d~W  121 (164)
                      .|+|+|+||+.++|||+|+|+|+|+|++|. +...+|+     .||||++|.|.+..+ .+|+|.+|+|+||+.   ++|
T Consensus         2 ~Y~I~v~TG~~~~AGT~a~V~i~l~G~~G~-s~~~~l~-----~f~rg~~d~F~~~~~~~lG~i~~i~i~~d~~g~~~~W   75 (111)
T d2p0ma2           2 VYRVCVSTGASIYAGSKNKVELWLVGQHGE-VELGSCL-----RPTRNKEEEFKVNVSKYLGSLLFVRLRKKHFLKEDAW   75 (111)
T ss_dssp             EEEEEEEECSSSSCCCSSEEEEEEEESSCE-EEEEEEE-----CCCTTCEEEEEEECSSCCCSEEEEEEEEECSSSCCCE
T ss_pred             eEEEEEEECCCCCCCCCCeEEEEEEECCCC-CCCcCcc-----ccccCcEEEEEEEeeccccceEEEEEEECCCCCCCCe
Confidence            699999999999999999999999999996 4566663     599999999999875 689999999999954   399


Q ss_pred             eeeEEEEEeC--CCCeEEEEcCeecCCC
Q 031172          122 KPESVKICGQ--NIRTVTFFYNTFIPDG  147 (164)
Q Consensus       122 ~~e~V~V~~~--~~~~~~F~cnrWL~~~  147 (164)
                      ||++|+|+++  +++.+.|||||||+++
T Consensus        76 ~l~~V~V~~~~~~~~~~~Fpc~~Wl~~d  103 (111)
T d2p0ma2          76 FCNWISVQALGAAEDKYWFPCYRWVVGD  103 (111)
T ss_dssp             EEEEEEEEESSSSCCCEEEEEEEEECSS
T ss_pred             EEEEEEEEecCCCCeEEEEEcCceECCC
Confidence            9999999986  5788999999999865

>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Dog (Canis familiaris) [TaxId: 9615]

Probab=99.88  E-value=9.1e-23  Score=149.66  Aligned_cols=104  Identities=13%  Similarity=0.121  Sum_probs=88.4

Q ss_pred             eeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEc--CCC-C
Q 031172           45 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRS--GSD-G  120 (164)
Q Consensus        45 ~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~-~~lG~i~~l~L~hd--G~d-~  120 (164)
                      ..|+|+|+||   +|||+|+|+|+|+|++|+ +....|.   ++.||||++|+|.+.. .++|+|.+|+|+||  |.+ +
T Consensus         2 ~rY~V~V~t~---gagT~a~v~i~L~G~~g~-t~~~~l~---~~~f~~g~~~~f~i~~~~~lG~l~~v~i~hdn~g~~~~   74 (113)
T d1rp1a1           2 WRYGVSITLS---GKRATGQAKVALFGSKGN-THQFNIF---KGILKPGSTHSNEFDAKLDVGTIEKVKFLWNNNVVNPT   74 (113)
T ss_dssp             EEEEEEEEEE---ESCEEEEEEEEEEETTEE-CCCEEEE---EEEECTTCEEEEEEEESSCCSSEEEEEEEEEEC--CTT
T ss_pred             eEEEEEEEEC---CCCccceEEEEEEcCCCC-cccEEEc---ceeEcCCCEEEEEEEeCCCCCCcEEEEEEECCCCCCCc
Confidence            5799999998   799999999999999996 5677774   3579999999999986 68899999999999  434 7


Q ss_pred             c---eeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031172          121 W---KPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  155 (164)
Q Consensus       121 W---~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  155 (164)
                      |   ++++|+|.+. +++.+.|.+++|+.+++...-.-|
T Consensus        75 w~~~~v~~V~V~~~~~g~~~~Fc~~~~v~~~v~~~l~pc  113 (113)
T d1rp1a1          75 FPKVGAAKITVQKGEEKTVHSFCSESTVREDVLLTLTPC  113 (113)
T ss_dssp             CCCEEEEEEEEEETTCSSC-EEECSCEECTTCCEEEEEC
T ss_pred             cccceeEEEEEEcCCCCcEEEECcCceEccCceeccccC
Confidence            7   9999999988 899999999999999976654444

>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=2.1e-22  Score=147.64  Aligned_cols=105  Identities=12%  Similarity=0.086  Sum_probs=88.5

Q ss_pred             eeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEcCC--C-C
Q 031172           45 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRSGS--D-G  120 (164)
Q Consensus        45 ~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~-~~lG~i~~l~L~hdG~--d-~  120 (164)
                      ..|+|+|+||+.  +||+|+|+|+|+|++|+ +....|.   ++.||||++|+|.+.. .++|+|.+|+|+||+.  + +
T Consensus         2 ~rY~V~V~t~~~--~gT~~~V~i~L~G~~G~-s~~~~l~---~~~f~rG~~~~f~~~~~~~lG~l~~i~i~hdn~g~~~~   75 (114)
T d1bu8a1           2 WRYKVSVTLSGA--KKLSGYILVALYGNNGN-SKQYEIF---KGSLKPEARHVRDIDVDINVGEIQKVKFLWNNKVINLF   75 (114)
T ss_dssp             EEEEEEEEEECS--SCEEEEEEEEEEETTEE-CCCEEEE---EEEECTTCEEEEEEEESSCCCSEEEEEEEEEC------
T ss_pred             cEEEEEEEECCC--CCcCceEEEEEEeCCCC-cccCccc---hhhccCCCceEEEEecCcCCCCcEEEEEEECCCcCCCc
Confidence            579999999975  59999999999999996 5677774   3679999999999987 5889999999999954  3 7


Q ss_pred             c---eeeEEEEEeC-CCCeEEEEcCeecCCCceeeecCC
Q 031172          121 W---KPESVKICGQ-NIRTVTFFYNTFIPDGVWFGFNQC  155 (164)
Q Consensus       121 W---~~e~V~V~~~-~~~~~~F~cnrWL~~~~~~~~~~C  155 (164)
                      |   ++++|+|.+. +++.+.|.+++|+.+++...---|
T Consensus        76 W~~~~l~~V~V~~~~~g~~~~Fc~~~~v~~~~~~~l~~c  114 (114)
T d1bu8a1          76 RPTLGASQITVQSGVDGKEYNFCSSDTVREDVLQSLYPC  114 (114)
T ss_dssp             CCCBEEEEEEEEETTTCCEEEEECCCCBCTTCCEEEEEC
T ss_pred             ccccceEEEEEEeCCCCCEEEEecCceEcCCceeecccC
Confidence            7   5999999988 789999999999999976654443

>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Colipase-binding domain
domain: Pancreatic lipase, C-terminal domain
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.78  E-value=5.5e-19  Score=129.68  Aligned_cols=98  Identities=12%  Similarity=0.052  Sum_probs=82.9

Q ss_pred             eeEEEEEEcCCCCCCcCceeEEEEEeeCCCCeeEEEcCCCcCCCcccCCCcceeEeec-CCCCCeEEEEEEEc--CCC-C
Q 031172           45 CSYTVIIKTSCSSKSYTRDKISLAFGDAYGNEVYIKRLDDPYSRTFESCSTDTFQISG-PCTYDICYQYLLRS--GSD-G  120 (164)
Q Consensus        45 ~~Y~V~V~TG~~~~AGTda~VsI~l~G~~G~~s~~~~Ld~~~~~~FErGsvD~F~v~~-~~lG~i~~l~L~hd--G~d-~  120 (164)
                      ..|+|+|+|+   ++||+++|+|+|+|++|+ +....|.+   +.||||++|+|.+.. .++|+|.+|++|||  |.+ +
T Consensus         2 ~rY~V~V~t~---g~~T~~~V~i~L~G~~G~-s~~~~L~~---~~f~~g~t~tf~i~~~~~lG~l~~v~~~hdnsg~~~~   74 (112)
T d1gpla1           2 WRYKVSVTLS---GKKVTGHILVSLFGNKGN-SKQYEIFK---GTLKPDSTHSNEFDSDVDVGDLQMVKFIWYNNVINPT   74 (112)
T ss_dssp             EEEEEEEEEE---ECCEEEEEEEEEEESSCE-EEEEEEEE---EEECTTCEEEEEEEESSCCCSEEEEEEEEEESSCCTT
T ss_pred             cEEEEEEEEc---CCCccceEEEEEEECCCC-cccEEEcC---ccccCCCEEEEEEEeCCCCCCcEEEEEEECCCCCCCC
Confidence            5799999997   689999999999999996 57777743   479999999999986 57899999999999  444 9


Q ss_pred             ce---eeEEEEEeCCCCeEEEEcCeecC-CCcee
Q 031172          121 WK---PESVKICGQNIRTVTFFYNTFIP-DGVWF  150 (164)
Q Consensus       121 W~---~e~V~V~~~~~~~~~F~cnrWL~-~~~~~  150 (164)
                      |+   .++|+|++.+++.+.| |.++.- .++-.
T Consensus        75 w~~~~~~~I~V~~g~g~~~~F-C~~~~v~~~~~q  107 (112)
T d1gpla1          75 LPRVGASKIIVETNVGKQFNF-CSPETVREEVLL  107 (112)
T ss_dssp             CCEEEEEEEEEECTTSCEEEE-ECSCCEETTCCE
T ss_pred             cccccCEEEEEECCCCeEEEe-cCcccccCCcee
Confidence            99   8999999887888888 998865 34433

>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}

class: All beta proteins
fold: Lipase/lipooxygenase domain (PLAT/LH2 domain)
superfamily: Lipase/lipooxygenase domain (PLAT/LH2 domain)
family: Lipoxigenase N-terminal domain
domain: Plant lipoxigenase
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=85.58  E-value=0.54  Score=34.17  Aligned_cols=54  Identities=15%  Similarity=0.089  Sum_probs=38.7

Q ss_pred             CcceeEee--c-CCCCCeEEEEEEEcCCCCceeeEEEEEeC-CCCeEEEEcCeecCCC
Q 031172           94 STDTFQIS--G-PCTYDICYQYLLRSGSDGWKPESVKICGQ-NIRTVTFFYNTFIPDG  147 (164)
Q Consensus        94 svD~F~v~--~-~~lG~i~~l~L~hdG~d~W~~e~V~V~~~-~~~~~~F~cnrWL~~~  147 (164)
                      ....|.++  - ...|.+=.+.|.-.=..--|++.|++++. +..+.+|+||.|+-.-
T Consensus        71 ~~~~y~v~F~vd~~fG~PGAi~V~N~h~~EffL~sitle~~p~~g~vhF~CNSWVyp~  128 (143)
T d3bnea2          71 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNT  128 (143)
T ss_dssp             TCEEEEEEECCCGGGCCEEEEEEEECSSSCEEEEEEEECCC----CEEEEEEEEECBG
T ss_pred             ccEEEEEEEEecccCCCccEEEEEecCCccEEEEEEEEecCCCCcCEEEeCCCcEeEC
Confidence            34567764  2 33499888888655456999999999865 5468999999999653