Citrus Sinensis ID: 031189

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160----
Protein Sequence
MSHQQNHRLQRQTPAAAQPAPQGLRKQHSWSPDVYRDEAWLRRKGNFKNKRSKSVTDEDVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLSKSTPPSLSTVSDCDTLSPLGSPHTIFGTGENDPQTVKTRLRQWAQVVACSVRQFSSS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccccccccccHHHHccHHHHHHHHHHHccccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHccccccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccccccccccccHHHcccHHHHHHHHHHHHccccccccccccccccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHEccccc
Coil and Loop (DISEMBL)
mshqqnhrlqrqtpaaaqpapqglrkqhswspdvyrdeawlrrkgnfknkrsksvtdedVDELKACIElgfgfdspagpdqdaadqRLSDTLPALELYYAVNKHylskstppslstvsdcdtlsplgsphtifgtgendpQTVKTRLRQWAQVVACSVRQFSSS
Flexible Loop (DISEMBL)
mshqqnhrlqrqtpaaaqpapqglrkqhswspdVYRDEAWlrrkgnfknkrsksvtdedvDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLSKSTPPSLSTVSDCDTLSPLGSPHTIFGTGENDPQTVKTRLRQWAQVVACSVRQFSSS
Low Complexity Region (SEG)
MSHQQNHRLqrqtpaaaqpapqGLRKQHSWSPDVYRDEAWLRRKGNFKNKRSKSVTDEDVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLSKSTPPSLSTVSDCDTLSPLGSPHTIFGTGENDPQTVKTRLRQWAQVVACSVRQFSSS
Disordered region (IsUnstruct)
**************************************AWL********************ELKACIELGFGF*****************TLPALELYYAVNKHYL*************************IF*********VKTRLRQWAQVVACSV******
Disordered Region (DISOPRED)
************************************************************DELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYA*********************************GTGENDPQTVKTRLRQWAQVVACSVRQF***
Disordered Region (DISEMBL)
******************************SPDVYRDEAWLRRKGNFKN*********DVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLSKS**********CDTLSPLGSPHTIFGTGENDPQTVKTRLRQWAQVVACSVRQFSSS
Disordered Region (DISPRO)
****************************************************KSVTDEDVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYL**********************PHTIFGTGENDPQTVKTRLRQWAQVVACSVRQF***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSHQQNHRLQRQTPAAAQPAPQGLRKQHSWSPDVYRDEAWLRRKGNFKNKRSKSVTDEDVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLSKSTPPSLSTVSDCDTLSPLGSPHTIFGTGENDPQTVKTRLRQWAQVVACSVRQFSSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
224084338	177	predicted protein [Populus trichocarpa]	0.817	0.757	0.714	2e-49
224094322	183	predicted protein [Populus trichocarpa]	0.859	0.770	0.707	4e-48
255565174	300	conserved hypothetical protein [Ricinus	0.792	0.433	0.748	2e-46
356496886	172	PREDICTED: uncharacterized protein LOC10	0.823	0.784	0.727	7e-45
357482925	172	hypothetical protein MTR_5g017450 [Medic	0.817	0.779	0.689	8e-45
351725489	167	uncharacterized protein LOC100527048 [Gl	0.823	0.808	0.731	1e-43
225438710	157	PREDICTED: uncharacterized protein LOC10	0.792	0.828	0.712	4e-40
147839731	298	hypothetical protein VITISV_028660 [Viti	0.768	0.422	0.711	7e-39
449463980	172	PREDICTED: uncharacterized protein LOC10	0.859	0.819	0.538	1e-34
297798512	155	hypothetical protein ARALYDRAFT_913003 [	0.902	0.954	0.541	8e-33

>gi|224084338|ref|XP_002307264.1| predicted protein [Populus trichocarpa] gi|222856713|gb|EEE94260.1| predicted protein [Populus trichocarpa]

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/147 (71%), Positives = 113/147 (76%), Gaps = 13/147 (8%)

Query: 20  APQGLRKQHSWSPDVYRDEAWLRRKGNFKNKRSKSVTDEDVDELKACIELGFGFDSPAGP 79
            P  L KQHSWSPD+YRDEAWLRRKGN+K K+ KSVTDED+DELK CIELGFGFDSP   
Sbjct: 33  GPSPLYKQHSWSPDIYRDEAWLRRKGNYKKKKCKSVTDEDLDELKGCIELGFGFDSP--- 89

Query: 80  DQDAADQRLSDTLPALELYYAVNKHYLSKSTPP------SLSTVSDCDTLSPLGSPHTIF 133
                DQRLSDT PALELYYAVNK+Y   S         S S  SDCD+LSPLGSPH IF
Sbjct: 90  ---EMDQRLSDTFPALELYYAVNKNYHDHSVSKPFTDTSSSSMASDCDSLSPLGSPHNIF 146

Query: 134 GTGENDPQTVKTRLRQWAQVVACSVRQ 160
           G G+N PQTVKTRL+QWAQVVACSVRQ
Sbjct: 147 GPGDN-PQTVKTRLKQWAQVVACSVRQ 172

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094322|ref|XP_002310141.1| predicted protein [Populus trichocarpa] gi|222853044|gb|EEE90591.1| predicted protein [Populus trichocarpa]

 Score =  196 bits (497), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/164 (70%), Positives = 123/164 (75%), Gaps = 23/164 (14%)

Query: 4   QQNHRLQRQTPAAAQPAPQGLRKQHSWSPDVYRDEAWLRRKGNFKNKRSKSVTDEDVDEL 63
           QQNHRL           P  L KQHSWSPD+ RDEAWLRRKG++K K+SKSVTDED+DEL
Sbjct: 31  QQNHRLL---------GPSPLYKQHSWSPDIDRDEAWLRRKGSYKKKKSKSVTDEDLDEL 81

Query: 64  KACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYL--SKSTP-----PSLST 116
           K CIELGFGFDSP        DQRLSDT PALELYYAVNK+Y   S S P     PS ST
Sbjct: 82  KGCIELGFGFDSP------EMDQRLSDTFPALELYYAVNKNYYDHSASKPVVTATPSSST 135

Query: 117 VSDCDTLSPLGSPHTIFGTGENDPQTVKTRLRQWAQVVACSVRQ 160
            SDCD+ SPLGSPHTIFG GEN PQTVKTRLRQWAQVVACSVRQ
Sbjct: 136 ASDCDSPSPLGSPHTIFGPGEN-PQTVKTRLRQWAQVVACSVRQ 178

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565174|ref|XP_002523579.1| conserved hypothetical protein [Ricinus communis] gi|223537141|gb|EEF38774.1| conserved hypothetical protein [Ricinus communis]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/143 (74%), Positives = 115/143 (80%), Gaps = 13/143 (9%)

Query: 24  LRKQHSWSPDVYRDEAWLRRKGNFKNKRSKSVTDEDVDELKACIELGFGFDSPAGPDQDA 83
           L KQHSWSPD+YRDEAWLRRKGN K K+SKSVTDEDVDELKACIELGFGFDSP       
Sbjct: 159 LYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVDELKACIELGFGFDSP------E 212

Query: 84  ADQRLSDTLPALELYYAVNKHYLSKS-TPPSL-----STVSDCDTLSPLGSPHTIFGTGE 137
            DQRLSDTLPAL LY+AVNKHY   + + P +     ST SDCD+ SPLGSPH IFG G+
Sbjct: 213 MDQRLSDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCDSPSPLGSPHAIFGPGD 272

Query: 138 NDPQTVKTRLRQWAQVVACSVRQ 160
           N PQTVKTRLRQWAQVVACSVRQ
Sbjct: 273 N-PQTVKTRLRQWAQVVACSVRQ 294

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496886|ref|XP_003517296.1| PREDICTED: uncharacterized protein LOC100792074 [Glycine max]

 Score =  185 bits (469), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/147 (72%), Positives = 118/147 (80%), Gaps = 12/147 (8%)

Query: 24  LRKQHSWSPDVYRDEAWLRRKGNFKNKRSKSVTDEDVDELKACIELGFGFDSPAGPDQDA 83
           L KQ SWSPD +RDEAWLRRKGN+KN+RSKSVTDEDVDELKACIELGFGFDS   P+ + 
Sbjct: 28  LFKQRSWSPDAFRDEAWLRRKGNWKNRRSKSVTDEDVDELKACIELGFGFDS--SPEVE- 84

Query: 84  ADQRLSDTLPALELYYAVNKHY----LSKSTP--PSLSTVSDCD-TLSPLGSPHT-IFGT 135
            DQRLSDTLPAL LYYAVNK Y    ++K+TP   S S  SDCD T  P GSPH+ IF T
Sbjct: 85  LDQRLSDTLPALGLYYAVNKRYNDSLVTKTTPSSSSSSAASDCDSTPCPHGSPHSAIFTT 144

Query: 136 GENDPQTVKTRLRQWAQVVACSVRQFS 162
           G+N PQTVKTRLRQWAQVVAC+VRQ S
Sbjct: 145 GDN-PQTVKTRLRQWAQVVACAVRQSS 170

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357482925|ref|XP_003611749.1| hypothetical protein MTR_5g017450 [Medicago truncatula] gi|355513084|gb|AES94707.1| hypothetical protein MTR_5g017450 [Medicago truncatula]

 Score =  184 bits (468), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 100/145 (68%), Positives = 111/145 (76%), Gaps = 11/145 (7%)

Query: 24  LRKQHSWSPDVYRDEAWLRRKGNFKNKRSKSVTDEDVDELKACIELGFGFDSPAGPDQDA 83
           L KQ SWSPD+YRDEAWLRRKGN+KN+RSKSVTDEDVDELKACIELGFGF+S   P+ + 
Sbjct: 30  LLKQRSWSPDLYRDEAWLRRKGNWKNRRSKSVTDEDVDELKACIELGFGFES--SPEVE- 86

Query: 84  ADQRLSDTLPALELYYAVNKHYLSKSTP-------PSLSTVSDCD-TLSPLGSPHTIFGT 135
            D+RL DTLPALELY+AVNK Y     P       PS S  SD D T SPLGSP T    
Sbjct: 87  TDRRLVDTLPALELYHAVNKSYNDSRNPKSAAVTTPSSSAASDRDGTPSPLGSPRTAIFG 146

Query: 136 GENDPQTVKTRLRQWAQVVACSVRQ 160
            ++DPQTVKTRLRQWAQVVAC+VRQ
Sbjct: 147 NDDDPQTVKTRLRQWAQVVACAVRQ 171

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725489|ref|NP_001237862.1| uncharacterized protein LOC100527048 [Glycine max] gi|255631440|gb|ACU16087.1| unknown [Glycine max]

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/145 (73%), Positives = 117/145 (80%), Gaps = 10/145 (6%)

Query: 24  LRKQHSWSPDVYRDEAWLRRKGNFKNKRSKSVTDEDVDELKACIELGFGFDSPAGPDQDA 83
           L KQ SWSPD +RDEAWLRRKGN KN+RSKSVTDEDVDELKACIELGFGFDS     ++ 
Sbjct: 25  LFKQRSWSPDAFRDEAWLRRKGNCKNRRSKSVTDEDVDELKACIELGFGFDSSP---ENE 81

Query: 84  ADQRLSDTLPALELYYAVNKHY----LSKSTPPSLSTVSDCDTL-SPLGSPHT-IFGTGE 137
            DQRLSDTLPAL LYYAVNK Y    ++K+TP S S  SDCD+  SP GSPH+ IF TG+
Sbjct: 82  LDQRLSDTLPALGLYYAVNKRYNNSLVTKTTPSSSSAASDCDSSPSPHGSPHSAIFTTGD 141

Query: 138 NDPQTVKTRLRQWAQVVACSVRQFS 162
           N PQTVKTRLRQWAQVVAC+VRQ S
Sbjct: 142 N-PQTVKTRLRQWAQVVACAVRQSS 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438710|ref|XP_002282456.1| PREDICTED: uncharacterized protein LOC100250717 [Vitis vinifera]

 Score =  169 bits (427), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/146 (71%), Positives = 111/146 (76%), Gaps = 16/146 (10%)

Query: 26  KQHSWSPD---VYRDEAWLRRKGN---FKNKRSKSVTDEDVDELKACIELGFGFDSPAGP 79
           KQ SWSPD    YRDEAW RRKGN      +RSKSVTDED+DELKACIELGFGFDSP   
Sbjct: 18  KQRSWSPDSPDTYRDEAWQRRKGNNTRRSRRRSKSVTDEDLDELKACIELGFGFDSP--- 74

Query: 80  DQDAADQRLSDTLPALELYYAVNKHY---LSKSTPPSLSTVSDCDTLSPLGSPHTIFGTG 136
                DQRLSDTLPAL LY AVNK Y   ++KS  PS ST+S+CD  SPLGSPHTIFG G
Sbjct: 75  ---DMDQRLSDTLPALGLYKAVNKQYFDTVAKSLSPSSSTMSECDPPSPLGSPHTIFGPG 131

Query: 137 ENDPQTVKTRLRQWAQVVACSVRQFS 162
           +N PQTVKTRLR WAQVVACSVRQ S
Sbjct: 132 DN-PQTVKTRLRHWAQVVACSVRQSS 156

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147839731|emb|CAN61779.1| hypothetical protein VITISV_028660 [Vitis vinifera]

 Score =  165 bits (417), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/142 (71%), Positives = 108/142 (76%), Gaps = 16/142 (11%)

Query: 26  KQHSWSPD---VYRDEAWLRRKGN---FKNKRSKSVTDEDVDELKACIELGFGFDSPAGP 79
           KQ SWSPD    YRDEAW RRKGN      +RSKSVTDED+DELKACIELGFGFDSP   
Sbjct: 76  KQRSWSPDSPDTYRDEAWQRRKGNNTRRSRRRSKSVTDEDLDELKACIELGFGFDSP--- 132

Query: 80  DQDAADQRLSDTLPALELYYAVNKHY---LSKSTPPSLSTVSDCDTLSPLGSPHTIFGTG 136
                DQRLSDTLPAL LY AVNK Y   ++KS  PS ST+S+CD  SPLGSPHTIFG G
Sbjct: 133 ---DMDQRLSDTLPALGLYKAVNKQYFDTVAKSLSPSSSTMSECDPPSPLGSPHTIFGPG 189

Query: 137 ENDPQTVKTRLRQWAQVVACSV 158
           +N PQTVKTRLR WAQVVACSV
Sbjct: 190 DN-PQTVKTRLRHWAQVVACSV 210

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463980|ref|XP_004149707.1| PREDICTED: uncharacterized protein LOC101213862 isoform 1 [Cucumis sativus] gi|449527183|ref|XP_004170592.1| PREDICTED: uncharacterized protein LOC101227707 isoform 1 [Cucumis sativus]

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/154 (53%), Positives = 106/154 (68%), Gaps = 13/154 (8%)

Query: 17  AQPAPQGLRKQHSWSPDVYRDEAW-LRRKGNFKNKRSKSVTDEDVDELKACIELGFGFDS 75
           A+  P  L +Q SWSPD  R+EAW  RRKG  K +R++S+T ED++ELKAC+ELGFGF+S
Sbjct: 25  AELIPTALYRQGSWSPDASREEAWQRRRKGRSKKERNRSLTAEDLEELKACLELGFGFES 84

Query: 76  PAGPDQDAADQRLSDTLPALELYYAVNKHY---LSKSTPPSLSTVSDCDTL---SPLGSP 129
           P        D RLS+TLPAL LY+AVNK Y   +SKS   +  +  D D +   SPLGSP
Sbjct: 85  PE------LDSRLSNTLPALGLYHAVNKSYSDSISKSANRTAFSSPDRDYINSPSPLGSP 138

Query: 130 HTIFGTGENDPQTVKTRLRQWAQVVACSVRQFSS 163
             IFG+   +P+ VKT+LRQWAQVVACSV+  S+
Sbjct: 139 LAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 172

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798512|ref|XP_002867140.1| hypothetical protein ARALYDRAFT_913003 [Arabidopsis lyrata subsp. lyrata] gi|297312976|gb|EFH43399.1| hypothetical protein ARALYDRAFT_913003 [Arabidopsis lyrata subsp. lyrata]

 Score =  145 bits (365), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/157 (54%), Positives = 107/157 (68%), Gaps = 9/157 (5%)

Query: 9   LQRQTPAAAQPAPQGLRKQHSWSPDVYRDEAWLRRKG---NFKNKRSKSVTDEDVDELKA 65
           + ++  A +QP P+ L KQHSWSPD  R+EAWLR+KG   + +  RSKSVTDED++ELK 
Sbjct: 1   MSKRNAAPSQPPPRPLVKQHSWSPDADREEAWLRKKGKKPSGRLGRSKSVTDEDLEELKG 60

Query: 66  CIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLSKSTPPSLSTVSDCDTLSP 125
           CIELGFGF+    PD    D RLS+TLPAL LY AVNK Y S+ +  S  +    +  + 
Sbjct: 61  CIELGFGFE----PDSPDLDPRLSETLPALGLYCAVNKQYSSRLSRTSSLSSIASEGENS 116

Query: 126 LGSPHTIFGTGENDPQTVKTRLRQWAQVVACSVRQFS 162
             S  TI   G +DP+T+K RL+QWAQVVACSVRQFS
Sbjct: 117 -NSSTTIVDQG-DDPETMKLRLKQWAQVVACSVRQFS 151

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
TAIR|locus:505006554	154	AT4G33985 "AT4G33985" [Arabido	0.804	0.857	0.594	5.8e-34
TAIR|locus:2053603	155	AT2G15590 "AT2G15590" [Arabido	0.804	0.851	0.471	3.3e-24
TAIR|locus:2074875	181	AT3G50350 "AT3G50350" [Arabido	0.640	0.580	0.533	6.8e-24
TAIR|locus:2025530	190	AT1G08790 "AT1G08790" [Arabido	0.798	0.689	0.424	2.2e-18
TAIR|locus:2058213	189	AT2G43340 "AT2G43340" [Arabido	0.609	0.529	0.444	4.1e-17
TAIR|locus:2148835	192	AT5G28690 "AT5G28690" [Arabido	0.774	0.661	0.417	2.3e-16
TAIR|locus:2198708	189	AT1G05870 "AT1G05870" [Arabido	0.609	0.529	0.405	4.7e-16
TAIR|locus:2084973	191	AT3G04700 "AT3G04700" [Arabido	0.603	0.518	0.461	6e-16
TAIR|locus:2065913	202	AT2G31560 "AT2G31560" [Arabido	0.621	0.504	0.380	3.8e-14

TAIR|locus:505006554 AT4G33985 "AT4G33985" [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 85/143 (59%), Positives = 101/143 (70%)

Query:    24 LRKQHSWSPDVYRDEAWLRRKGNF---KNKRSKSVTDEDVDELKACIELGFGFDSPAGPD 80
             L KQHSWSPD  R+EAWLR+KG     +  RSKSVTDED++ELK CIELGFGF+ P  PD
Sbjct:    15 LVKQHSWSPDADREEAWLRKKGKQSLGRLGRSKSVTDEDLEELKGCIELGFGFE-PDSPD 73

Query:    81 QDAADQRLSDTLPALELYYAVNKHYLSK-STPPSLSTVSDCDTLSPLGSPHTIFGTGEND 139
                 D RLS+TLPAL LY AVNK Y S+ S   SLS+++     S   S  TI   G+ D
Sbjct:    74 ---LDPRLSETLPALGLYCAVNKQYSSRLSRTSSLSSIASEGENS--NSSTTIVDQGD-D 127

Query:   140 PQTVKTRLRQWAQVVACSVRQFS 162
             P+T+K RL+QWAQVVACSV+QFS
Sbjct:   128 PETMKLRLKQWAQVVACSVKQFS 150

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010286 "heat acclimation" evidence=RCA

TAIR|locus:2053603 AT2G15590 "AT2G15590" [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 67/142 (47%), Positives = 94/142 (66%)

Query:    24 LRKQHSWSPDVYRDEAWLRRKGNFKNK---RSKSVTDEDVDELKACIELGFGFDSPAGPD 80
             L KQ+SWSPD+ R+EAWLR+K         RSKSVT++D++ELK C ELGFGF++ + PD
Sbjct:    12 LMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEELKGCFELGFGFETES-PD 70

Query:    81 QDAADQRLSDTLPALELYYAVNKHYLSKSTPPSLSTVSDCDTLSPLGSPHTIFGTGENDP 140
                 + RLS T+PAL+LY AV++ Y +  +  S S  SD + +S   +  TI   G+ D 
Sbjct:    71 ---LNPRLSHTIPALDLYCAVHRQYSNHLSRTS-SFASDHE-VSNSNNITTIVDKGD-DR 124

Query:   141 QTVKTRLRQWAQVVACSVRQFS 162
             +T+K +L+QWA+VV  SVR  S
Sbjct:   125 KTMKQKLKQWAKVVGFSVRHSS 146

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2074875 AT3G50350 "AT3G50350" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 64/120 (53%), Positives = 82/120 (68%)

Query:    24 LRKQHSWSPDVYRDEAWLRRKGNFKNK---RSKSVTDEDVDELKACIELGFGFDSPAGPD 80
             L KQHSWSPD+ R+EAW +R+   +++   R KS+TDED+DELKA  ELGFGF SP    
Sbjct:    39 LLKQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLDELKASFELGFGFGSP---- 94

Query:    81 QDAADQRLSDTLPALELYYAVNKHY---LSKSTPPSLSTVSDCDTLSPLGSPHTIFGTGE 137
              + AD RLS+TLPALELY+AV K Y   +S  +  S S++SD DT SP    HT++ T E
Sbjct:    95 -ENADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDT-SP---HHTVYQTNE 149

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2025530 AT1G08790 "AT1G08790" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 67/158 (42%), Positives = 82/158 (51%)

Query:    24 LRKQHSWSPDVYRDEAWLRRKGNF------KNKRSKSVTDEDVDELKACIELGFGFDSPA 77
             L KQ S   +  RD AW RR+          N+    +TDED+ ELK  IELGFGF+   
Sbjct:    42 LSKQLSML-ETRRDIAWERRRRQMLHHLEKHNEGGDDLTDEDLSELKGSIELGFGFNEEQ 100

Query:    78 GPDQDAADQRLSDTLPALELYYAVNKHYLSKSTPPSLSTVSDC------DTLSPLGSPHT 131
             G       Q L+ TLPAL+LY+AV +     STP S  + S        D  S  GSP +
Sbjct:   101 G-------QHLTTTLPALDLYFAVTRQISPVSTPGSGGSSSSSRPTSLGDRSSSFGSPIS 153

Query:   132 ------IFGTGENDPQTVKTRLRQWAQVVACSVRQFSS 163
                   +   G+ DPQ VKTRLR WAQ VACSV Q S+
Sbjct:   154 DSDSLKVMSPGD-DPQQVKTRLRHWAQAVACSVIQSSN 190

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2058213 AT2G43340 "AT2G43340" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 52/117 (44%), Positives = 74/117 (63%)

Query:    50 KRSKSVTDEDVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNK------ 103
             KR+KS+TD+D++ELK C++LGFGF+    P+       L +TLPALEL Y++++      
Sbjct:    80 KRTKSLTDDDLEELKGCVDLGFGFNYEEIPE-------LCNTLPALELCYSMSQKFIDQD 132

Query:   104 -HYLSKSTPPSLSTVSDCDTLSPLGSPHTIFGTGENDPQTVKTRLRQWAQVVACSVR 159
              H+ S S+P   S+V D   +SP+ S   I   G+N P  VK RL+ WAQ VAC+VR
Sbjct:   133 HHHHSSSSPEKKSSVLD-SPVSPIAS-WKISSPGDN-PDDVKARLKFWAQAVACTVR 186

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2148835 AT5G28690 "AT5G28690" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 68/163 (41%), Positives = 84/163 (51%)

Query:    24 LRKQHSWSPDVYRDEAWLRRKGNF---KNKRSKSV----------TDEDVDELKACIELG 70
             L KQ S   +  RD AW +R+      + K+ KSV          TDED+ ELK  IELG
Sbjct:    38 LSKQLSMR-ETPRDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGSIELG 96

Query:    71 FGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLSKSTPPS-------LSTVSDCDTL 123
             FGF   AG       Q+L +TLPAL+LY+AVN+      +P S       LS+ S   + 
Sbjct:    97 FGFSEEAG-------QKLCNTLPALDLYFAVNRQLSPLPSPSSSNGGDGSLSSTSVSSSS 149

Query:   124 SPLGSPHT------IFGTGENDPQTVKTRLRQWAQVVACSVRQ 160
              P  SP T      I   G+N PQ VK RLR WAQ VACS+ Q
Sbjct:   150 IPC-SPKTDSDSLKILCPGDN-PQQVKQRLRHWAQAVACSLMQ 190

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2198708 AT1G05870 "AT1G05870" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 47/116 (40%), Positives = 72/116 (62%)

Query:    51 RSKSVTDEDVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLS--K 108
             RSKS+TD+D+++L+ C++LGFGF     P+       L +TLPALEL Y++++ +L   +
Sbjct:    80 RSKSLTDDDLEDLRGCLDLGFGFSYDEIPE-------LCNTLPALELCYSMSQKFLDDKQ 132

Query:   109 STPPSLSTVSDCD-----TLSPLGSPHTIFGTGENDPQTVKTRLRQWAQVVACSVR 159
             +  P  S+V DC      T +P+ +   I   G+N P  VK RL+ WAQ VAC+V+
Sbjct:   133 NKSPETSSVEDCPSPPLVTATPIAN-WKISSPGDN-PDDVKARLKYWAQAVACTVQ 186

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2084973 AT3G04700 "AT3G04700" [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 54/117 (46%), Positives = 69/117 (58%)

Query:    54 SVTDEDVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYL------- 106
             ++TDED++ELK  IELGFGF+  AG       Q+L +TLPAL+LY+AVN+          
Sbjct:    81 NLTDEDLNELKGSIELGFGFNEEAG-------QKLCNTLPALDLYFAVNRQLSPLPSPSS 133

Query:   107 SKSTPPSLSTVSDCDTLSPLGSPHT---IFGTGENDPQTVKTRLRQWAQVVACSVRQ 160
             S+S+  S ST S     SP  +      I   G+ DPQ +K RLR WAQ VACSV Q
Sbjct:   134 SRSSSASASTFSYSIPCSPKKTDSDSVKILCPGD-DPQQMKQRLRHWAQAVACSVMQ 189

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

TAIR|locus:2065913 AT2G31560 "AT2G31560" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 43/113 (38%), Positives = 65/113 (57%)

Query:    51 RSKSVTDEDVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLSKST 110
             R+KS+TD+D++ELK C++LGFGF     P+       L +TLPALEL Y++++ +L    
Sbjct:    94 RAKSLTDDDLEELKGCLDLGFGFSYDEIPE-------LCNTLPALELCYSMSQKFLDDKQ 146

Query:   111 PPSLSTVSDCDTLSPLGSPHTI----FGTGENDPQTVKTRLRQWAQVVACSVR 159
                  +  + D+  P  +   I      +  +DP  VK RL+ WAQ VAC+VR
Sbjct:   147 QNHHKSQEEDDSSPPPTTTAPIANWKISSPGDDPDDVKARLKYWAQTVACTVR 199


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.129   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      164       151   0.00097  104 3  11 23  0.38    32
                                                     30  0.40    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  165 KB (2097 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.85u 0.10s 15.95t   Elapsed:  00:00:01
  Total cpu time:  15.85u 0.10s 15.95t   Elapsed:  00:00:01
  Start:  Fri May 10 15:06:20 2013   End:  Fri May 10 15:06:21 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_V0514 hypothetical protein (177 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	164
pfam07939	63	pfam07939, DUF1685, Protein of unknown function (D	4e-21

>gnl|CDD|191899 pfam07939, DUF1685, Protein of unknown function (DUF1685)

 Score = 81.2 bits (201), Expect = 4e-21
 Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 11/70 (15%)

Query: 55  VTDEDVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLS----KST 110
           +TD+D++ELK C +LGFGFD   GP       RL +TLPAL+LY+AV++ +L     KS 
Sbjct: 1   LTDDDLEELKGCFDLGFGFDEEDGP-------RLCNTLPALDLYFAVSRQFLDDLSRKSP 53

Query: 111 PPSLSTVSDC 120
             S S+V   
Sbjct: 54  SSSPSSVCSS 63

The members of this family are hypothetical eukaryotic proteins of unknown function. The region in question is approximately 100 amino acid residues long. Length = 63

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	164
PF07939	64	DUF1685: Protein of unknown function (DUF1685); In	99.94

>PF07939 DUF1685: Protein of unknown function (DUF1685); InterPro: IPR012881 The members of this family are hypothetical eukaryotic proteins of unknown function

Probab=99.94  E-value=2.3e-27  Score=166.80  Aligned_cols=48  Identities=67%  Similarity=1.191  Sum_probs=46.0

Q ss_pred             CChhhHHHhhhhhhhcCCCCCCCCCCCccccchhhhhhhhhhHHHHhhcccCCC
Q 031189           55 VTDEDVDELKACIELGFGFDSPAGPDQDAADQRLSDTLPALELYYAVNKHYLSK  108 (164)
Q Consensus        55 lTD~DleELKGc~DLGFgF~~~~~~d~ed~~p~L~~tLPaL~l~~av~~~~~~~  108 (164)
                      |||+|||||||||||||||++      ++.+|+||+|||||++||||||+|++.
T Consensus         1 lTd~dldELkGc~dLGFgF~~------~~~~p~L~~tlPaL~lyyavn~q~~~~   48 (64)
T PF07939_consen    1 LTDDDLDELKGCIDLGFGFDE------EDLDPRLCDTLPALELYYAVNRQYSDH   48 (64)
T ss_pred             CcHhHHHHHhhhhhhccccCc------cccChHHHhhhHHHHHHHHHHHHhccc
Confidence            799999999999999999986      789999999999999999999999987

The region in question is approximately 100 amino acid residues long.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00