Citrus Sinensis ID: 031254

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160---
Protein Sequence
MERVKEEEVKEGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHIKQYMPKLAGLDAVVNIGKMRISGLDIEAEEDV
Secondary Structure (PSIPRED)
cccccHHEEEEEEEEEEEEEcccEEEEEEEccccEEEEEEEcEEcccccccccccEEEEEEEEEEcccccEEEEEEEEcccccccccccccccccccccccHHHHHHccccEEEEEEEccccccHHHHHHHHHHccccccccEEEEEEEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHcEEEEEEcccccEcEEEEEccccEEEcccccEcccccccccccccEEEEEEEEEcccccEEEEEEEEcccccHHHccccccccccHHHcHHHccHccccEEEEEEEEEEcccHHHHHHHHHHHcHHHccccEEEEEEEEEEEEEcccccccc
Coil and Loop (DISEMBL)
MERVKEEEVKEGVASIallpngsisghfiqlphsicyglhgtelacerecsrgedYRLIKLAIIDYNKKKEHDVIVECRghdaarfnninhahgwekdvsGMVEQEQEKNKIAVSFECETLKAEKVAEDHIKQYMPKLAGLDAVVNIGKmrisgldieaeedv
Flexible Loop (DISEMBL)
MERVKEEEVKEGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHIKQYMPKLAGLDAVVNIGKMRIsgldieaeedv
Low Complexity Region (SEG)
MervkeeevkeGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHIKQYMPKLAGLDAVVNIGKMRISGLDIEAEEDV
Disordered region (IsUnstruct)
************VASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSG*********KIAVSFECETLKAEKVAEDHIKQYMPKLAGLDAVVNIGKMRI***********
Disordered Region (DISOPRED)
***********GVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHIKQYMPKLAGLDAVVNIGKMRISGLDIE*****
Disordered Region (DISEMBL)
***********GVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHIKQYMPKLAGLDAVVNIGKMRISGLDIEAEEDV
Disordered Region (DISPRO)
*****EEEVKEGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHIKQYMPKLAGLDAVVNIGKMRISGLDIEA****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MERVKEEEVKEGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHIKQYMPKLAGLDAVVNIGKMRISGLDIEAEEDV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
118482173	185	unknown [Populus trichocarpa]	0.963	0.848	0.802	4e-70
224141463	185	predicted protein [Populus trichocarpa]	0.963	0.848	0.802	4e-70
296082981	188	unnamed protein product [Vitis vinifera]	0.981	0.851	0.775	8e-69
225452946	172	PREDICTED: uncharacterized protein LOC10	0.981	0.930	0.775	2e-68
255570226	175	conserved hypothetical protein [Ricinus	0.944	0.88	0.811	2e-68
145339062	178	uncharacterized protein [Arabidopsis tha	0.926	0.848	0.754	7e-64
351726218	170	uncharacterized protein LOC100306056 [Gl	0.907	0.870	0.770	1e-63
449464250	158	PREDICTED: uncharacterized protein LOC10	0.926	0.955	0.761	2e-63
356573522	169	PREDICTED: uncharacterized protein LOC10	0.920	0.887	0.768	5e-63
297818568	177	hypothetical protein ARALYDRAFT_484699 [	0.914	0.841	0.751	6e-63

>gi|118482173|gb|ABK93016.1| unknown [Populus trichocarpa]

 Score =  268 bits (686), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 126/157 (80%), Positives = 141/157 (89%)

Query: 5   KEEEVKEGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAII 64
           K E VKEGVASIALLP+GSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKL I+
Sbjct: 20  KVEVVKEGVASIALLPSGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLTIV 79

Query: 65  DYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAE 124
           D+N  KE  V+VEC+GHDAARF+N++ AHGWEKD+ GMVE++  K KI VSFECETLKA+
Sbjct: 80  DFNSGKEQAVVVECKGHDAARFHNVDQAHGWEKDIVGMVEEKHGKKKIHVSFECETLKAD 139

Query: 125 KVAEDHIKQYMPKLAGLDAVVNIGKMRISGLDIEAEE 161
           K AEDHIKQ+MPKLAGLDAVVNIG+M ISGLD EAE+
Sbjct: 140 KAAEDHIKQFMPKLAGLDAVVNIGRMSISGLDFEAED 176

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141463|ref|XP_002324091.1| predicted protein [Populus trichocarpa] gi|222867093|gb|EEF04224.1| predicted protein [Populus trichocarpa]

 Score =  268 bits (686), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 126/157 (80%), Positives = 141/157 (89%)

Query: 5   KEEEVKEGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAII 64
           K E VKEGVASIALLP+GSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKL I+
Sbjct: 20  KVEVVKEGVASIALLPSGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLTIV 79

Query: 65  DYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAE 124
           D+N  KE  V+VEC+GHDAARF+N++ AHGWEKD+ GMVE++  K KI VSFECETLKA+
Sbjct: 80  DFNSGKEQAVVVECKGHDAARFHNVDQAHGWEKDIVGMVEEKHGKKKIHVSFECETLKAD 139

Query: 125 KVAEDHIKQYMPKLAGLDAVVNIGKMRISGLDIEAEE 161
           K AEDHIKQ+MPKLAGLDAVVNIG+M ISGLD EAE+
Sbjct: 140 KAAEDHIKQFMPKLAGLDAVVNIGRMSISGLDFEAED 176

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082981|emb|CBI22282.3| unnamed protein product [Vitis vinifera]

 Score =  264 bits (675), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 124/160 (77%), Positives = 141/160 (88%)

Query: 2   ERVKEEEVKEGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKL 61
           E  KE  V+EGVASIALLP GS+SGHFIQLPH+IC+GLHGTELACERECSRGEDYRLIKL
Sbjct: 21  EERKEGVVREGVASIALLPCGSLSGHFIQLPHAICFGLHGTELACERECSRGEDYRLIKL 80

Query: 62  AIIDYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETL 121
            I D++ K+E  VIVECRGHDAARF++I+ AHGWE DV GMVEQ+  KNKI VSFECETL
Sbjct: 81  TITDFSSKREQTVIVECRGHDAARFHSIDRAHGWEMDVVGMVEQKHGKNKIVVSFECETL 140

Query: 122 KAEKVAEDHIKQYMPKLAGLDAVVNIGKMRISGLDIEAEE 161
           KA+K AEDHI+Q+MPKLAGLDAVVNIG+M I+GLD+EA E
Sbjct: 141 KADKAAEDHIRQFMPKLAGLDAVVNIGRMSITGLDLEAAE 180

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452946|ref|XP_002279000.1| PREDICTED: uncharacterized protein LOC100243877 [Vitis vinifera] gi|147842425|emb|CAN69515.1| hypothetical protein VITISV_009952 [Vitis vinifera]

 Score =  263 bits (673), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 124/160 (77%), Positives = 141/160 (88%)

Query: 2   ERVKEEEVKEGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKL 61
           E  KE  V+EGVASIALLP GS+SGHFIQLPH+IC+GLHGTELACERECSRGEDYRLIKL
Sbjct: 5   EERKEGVVREGVASIALLPCGSLSGHFIQLPHAICFGLHGTELACERECSRGEDYRLIKL 64

Query: 62  AIIDYNKKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETL 121
            I D++ K+E  VIVECRGHDAARF++I+ AHGWE DV GMVEQ+  KNKI VSFECETL
Sbjct: 65  TITDFSSKREQTVIVECRGHDAARFHSIDRAHGWEMDVVGMVEQKHGKNKIVVSFECETL 124

Query: 122 KAEKVAEDHIKQYMPKLAGLDAVVNIGKMRISGLDIEAEE 161
           KA+K AEDHI+Q+MPKLAGLDAVVNIG+M I+GLD+EA E
Sbjct: 125 KADKAAEDHIRQFMPKLAGLDAVVNIGRMSITGLDLEAAE 164

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570226|ref|XP_002526073.1| conserved hypothetical protein [Ricinus communis] gi|223534570|gb|EEF36267.1| conserved hypothetical protein [Ricinus communis]

 Score =  263 bits (671), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 125/154 (81%), Positives = 138/154 (89%)

Query: 8   EVKEGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYN 67
           EVKEG+ASIALLP GSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKL IIDYN
Sbjct: 14  EVKEGMASIALLPCGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLTIIDYN 73

Query: 68  KKKEHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVA 127
             KE  V+VECRGHDAARF+NI+HAHGWEKDV  M E++  K KI VSF CETLKA+K A
Sbjct: 74  SGKEQAVVVECRGHDAARFHNIDHAHGWEKDVVAMAEEKHGKKKIFVSFVCETLKADKAA 133

Query: 128 EDHIKQYMPKLAGLDAVVNIGKMRISGLDIEAEE 161
           E+HI+++MPKLAGLDAVVNIGKMRISGLD EA++
Sbjct: 134 EEHIRKFMPKLAGLDAVVNIGKMRISGLDFEADD 167

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145339062|ref|NP_189574.2| uncharacterized protein [Arabidopsis thaliana] gi|332644041|gb|AEE77562.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  248 bits (633), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 114/151 (75%), Positives = 134/151 (88%)

Query: 12  GVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKE 71
           GVASIALLP G+ISGHFIQ+P SICYGLHGTELACE ECSRGEDYRLIKL IIDYN+KKE
Sbjct: 24  GVASIALLPCGTISGHFIQMPSSICYGLHGTELACETECSRGEDYRLIKLTIIDYNRKKE 83

Query: 72  HDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHI 131
             V+VEC+GHDAAR N++ HAHGWE+DV G+VE++  K K++VSFECETLKA++ AEDHI
Sbjct: 84  QTVVVECKGHDAARINDVEHAHGWEEDVIGLVEEKHGKKKVSVSFECETLKADEAAEDHI 143

Query: 132 KQYMPKLAGLDAVVNIGKMRISGLDIEAEED 162
           +Q+MPKLAGLDAV+NIG M+ISGLD  A E+
Sbjct: 144 RQFMPKLAGLDAVINIGPMKISGLDFAAVEE 174

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726218|ref|NP_001236863.1| uncharacterized protein LOC100306056 [Glycine max] gi|255627405|gb|ACU14047.1| unknown [Glycine max]

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 114/148 (77%), Positives = 131/148 (88%)

Query: 14  ASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKEHD 73
           ASIALLP GSISGHFIQLPHSICYGL GTELACERECSRGEDYRLIKL I D+N KKE  
Sbjct: 18  ASIALLPCGSISGHFIQLPHSICYGLCGTELACERECSRGEDYRLIKLTITDFNTKKEQA 77

Query: 74  VIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHIKQ 133
            +VEC+GHDAARF++I+HAHGW+KD++GM+E +  K +I+VSFECETLKA K AEDHI++
Sbjct: 78  TVVECKGHDAARFHSIDHAHGWDKDITGMIEPKDGKKRISVSFECETLKAGKAAEDHIRK 137

Query: 134 YMPKLAGLDAVVNIGKMRISGLDIEAEE 161
           +MPKLAGLDAVVNIGKM ISGLD  AE+
Sbjct: 138 FMPKLAGLDAVVNIGKMTISGLDFGAED 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464250|ref|XP_004149842.1| PREDICTED: uncharacterized protein LOC101206322 [Cucumis sativus]

 Score =  246 bits (628), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 130/151 (86%)

Query: 11  EGVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKK 70
           EGVASIALLP GS+SGHFIQLPHSICYGLHGTEL CERECSRGEDYRLIKL I +YN K+
Sbjct: 4   EGVASIALLPCGSVSGHFIQLPHSICYGLHGTELECERECSRGEDYRLIKLTITNYNNKQ 63

Query: 71  EHDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDH 130
           E  V+VECRGHDAARF++I HAHGWE+DV  MVE++  KN+I VSFEC+ LK+EK AEDH
Sbjct: 64  ERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDH 123

Query: 131 IKQYMPKLAGLDAVVNIGKMRISGLDIEAEE 161
           I+Q+MPKL G DAVVN+G M I GLD EAEE
Sbjct: 124 IRQFMPKLVGQDAVVNVGPMSIGGLDFEAEE 154

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573522|ref|XP_003554907.1| PREDICTED: uncharacterized protein LOC100795132 [Glycine max]

 Score =  245 bits (625), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 116/151 (76%), Positives = 132/151 (87%), Gaps = 1/151 (0%)

Query: 12  GVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKE 71
           GVASIALLP GSISGHFIQLPH ICYGL GTELACERECSRGEDYRLIKL I D+N KKE
Sbjct: 20  GVASIALLPCGSISGHFIQLPHYICYGLCGTELACERECSRGEDYRLIKLTITDFNAKKE 79

Query: 72  HDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHI 131
              +VEC+GHDAA F++I+HAHGW+KD++GM+E +  K +I+VSFECETLKAEK AEDHI
Sbjct: 80  QATVVECKGHDAAWFHSIDHAHGWDKDITGMIEPKDGKKRISVSFECETLKAEKAAEDHI 139

Query: 132 KQYMPKLAGLDAVVNIGKMRISGLDIEAEED 162
           +++MPKLAGLDAVVNIGKM ISGLD   EED
Sbjct: 140 RKFMPKLAGLDAVVNIGKMTISGLDF-GEED 169

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297818568|ref|XP_002877167.1| hypothetical protein ARALYDRAFT_484699 [Arabidopsis lyrata subsp. lyrata] gi|297323005|gb|EFH53426.1| hypothetical protein ARALYDRAFT_484699 [Arabidopsis lyrata subsp. lyrata]

 Score =  244 bits (624), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 112/149 (75%), Positives = 131/149 (87%)

Query: 14  ASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKEHD 73
           ASIALLP G+ISGHFIQ+P SICYGLHGTELACE ECSRGEDYRLIKL IIDYN+KKE  
Sbjct: 25  ASIALLPCGTISGHFIQMPSSICYGLHGTELACETECSRGEDYRLIKLTIIDYNRKKEQT 84

Query: 74  VIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHIKQ 133
           V+VEC+GHDAAR N++ HAHGWE+DV G+VE++  K K++VSFECETLKA+K AEDHI+Q
Sbjct: 85  VVVECKGHDAARINDVEHAHGWEEDVIGLVEEKHGKKKVSVSFECETLKADKAAEDHIRQ 144

Query: 134 YMPKLAGLDAVVNIGKMRISGLDIEAEED 162
           +MPKLAGLDAV+NIG M+ISGLD    E+
Sbjct: 145 FMPKLAGLDAVINIGPMKISGLDFAVVEE 173

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
TAIR|locus:2091306	178	AT3G29280 "AT3G29280" [Arabido	0.926	0.848	0.754	1e-61

TAIR|locus:2091306 AT3G29280 "AT3G29280" [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 114/151 (75%), Positives = 134/151 (88%)

Query:    12 GVASIALLPNGSISGHFIQLPHSICYGLHGTELACERECSRGEDYRLIKLAIIDYNKKKE 71
             GVASIALLP G+ISGHFIQ+P SICYGLHGTELACE ECSRGEDYRLIKL IIDYN+KKE
Sbjct:    24 GVASIALLPCGTISGHFIQMPSSICYGLHGTELACETECSRGEDYRLIKLTIIDYNRKKE 83

Query:    72 HDVIVECRGHDAARFNNINHAHGWEKDVSGMVEQEQEKNKIAVSFECETLKAEKVAEDHI 131
               V+VEC+GHDAAR N++ HAHGWE+DV G+VE++  K K++VSFECETLKA++ AEDHI
Sbjct:    84 QTVVVECKGHDAARINDVEHAHGWEEDVIGLVEEKHGKKKVSVSFECETLKADEAAEDHI 143

Query:   132 KQYMPKLAGLDAVVNIGKMRISGLDIEAEED 162
             +Q+MPKLAGLDAV+NIG M+ISGLD  A E+
Sbjct:   144 RQFMPKLAGLDAVINIGPMKISGLDFAAVEE 174


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.135   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      163       153   0.00081  105 3  11 22  0.37    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  585 (62 KB)
  Total size of DFA:  153 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.99u 0.11s 15.10t   Elapsed:  00:00:01
  Total cpu time:  14.99u 0.11s 15.10t   Elapsed:  00:00:01
  Start:  Mon May 20 21:00:42 2013   End:  Mon May 20 21:00:43 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00