Citrus Sinensis ID: 031391

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Protein Sequence
MWKLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEHHHHHHHHHHHHHHcHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mwklkqlvagdeereesfledesdgicslSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLlavgstafvigpaqQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL
Flexible Loop (DISEMBL)
mwklkqlvagdeereesfledesdGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL
Low Complexity Region (SEG)
MWKLKQLVAGdeereesfledesdGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKiltilaiiceicallWYSLSYIPFARRMISELMIRLCDTEL
Disordered region (IsUnstruct)
************************GICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFARRMISELMIRLC****
Disordered Region (DISOPRED)
****K********************ICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL
Disordered Region (DISEMBL)
***********************DGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL
Disordered Region (DISPRO)
******LVA******ESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDT**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MWKLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	160	2.2.26 [Sep-21-2011]
O95562	160	Vesicle transport protein	yes	no	0.918	0.918	0.368	6e-24
Q8VD57	159	Vesicle transport protein	yes	no	0.912	0.918	0.355	8e-22
Q8WV19	159	Vesicle transport protein	no	no	0.968	0.974	0.368	3e-21
Q5SSN7	159	Vesicle transport protein	no	no	0.887	0.893	0.369	3e-21
Q5U3Y5	159	Vesicle transport protein	yes	no	0.9	0.905	0.371	2e-20
Q4FZV2	157	Vesicle transport protein	no	no	0.912	0.929	0.326	5e-13
Q9P6K1	201	Protein transport protein	yes	no	0.825	0.656	0.313	1e-08
P38166	215	Protein transport protein	yes	no	0.843	0.627	0.270	2e-08

>sp|O95562|SFT2B_HUMAN Vesicle transport protein SFT2B OS=Homo sapiens GN=SFT2D2 PE=1 SV=1

 Score =  109 bits (273), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 92/152 (60%), Gaps = 5/152 (3%)

Query: 3   KLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIK- 61
           KLK++++G +  + S L +  +   SLS++ R+  F AC   G++C  L  ++   P K 
Sbjct: 3   KLKKVLSGQDTEDRSGLSEVVEA-SSLSWSTRIKGFIACFAIGILCSLLGTVLLWVPRKG 61

Query: 62  ---FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHS 118
              FA+ +TFGN+ ++GST F++GP +Q+  MF+  R+ AT + L+C  + L  A   H+
Sbjct: 62  LHLFAVFYTFGNIASIGSTIFLMGPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWHN 121

Query: 119 KILTILAIICEICALLWYSLSYIPFARRMISE 150
           K L ++  I +  AL WYSLS+IPFAR  + +
Sbjct: 122 KGLALIFCILQSLALTWYSLSFIPFARDAVKK 153

May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.
Homo sapiens (taxid: 9606)

>sp|Q8VD57|SFT2B_MOUSE Vesicle transport protein SFT2B OS=Mus musculus GN=Sft2d2 PE=1 SV=1

 Score =  102 bits (255), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 92/152 (60%), Gaps = 6/152 (3%)

Query: 3   KLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIK- 61
           KLK++++G +  + S L +  +   SLS+  R+  F AC   G++C  L  ++   P K 
Sbjct: 3   KLKKVLSGQDTEDRSGLSEVVEA-SSLSWGTRIKGFIACFALGILCSVLGTLLLWVPRKG 61

Query: 62  ---FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHS 118
              FA+ +T GN++++GST F++GP +Q+  MF+  R+ AT + L+C  + L C+  + +
Sbjct: 62  LGLFAVFYTLGNIMSIGSTVFLMGPLKQLKRMFEPTRLIATILVLLCFALTL-CSAFLWN 120

Query: 119 KILTILAIICEICALLWYSLSYIPFARRMISE 150
           K L ++  I +  AL WYSLSYIP+AR  + +
Sbjct: 121 KGLALIFCILQSLALTWYSLSYIPYARDAVKK 152

May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.

Mus musculus (taxid: 10090)

>sp|Q8WV19|SFT2A_HUMAN Vesicle transport protein SFT2A OS=Homo sapiens GN=SFT2D1 PE=1 SV=1

 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 94/163 (57%), Gaps = 8/163 (4%)

Query: 1   MWKLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP- 59
           M KL+++++G ++ E+       D   SLS+  R+  FA C + G+    L   +   P 
Sbjct: 1   MEKLRRVLSGQDDEEQGLTAQVLDA-SSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPG 59

Query: 60  -IK-FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIH 117
            IK FA+ +T GNL A+ ST F++GP +Q+  MF++ R+ AT V L+C +  L  AL  H
Sbjct: 60  GIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWH 119

Query: 118 SKILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160
            K L +L  I +  ++ WYSLSYIP+AR    + +I+ C + L
Sbjct: 120 KKGLAVLFCILQFLSMTWYSLSYIPYAR----DAVIKCCSSLL 158

May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.

Homo sapiens (taxid: 9606)

>sp|Q5SSN7|SFT2A_MOUSE Vesicle transport protein SFT2A OS=Mus musculus GN=Sft2d1 PE=2 SV=1

 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 85/146 (58%), Gaps = 4/146 (2%)

Query: 3   KLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIK- 61
           KL+++++G ++ E+       D   SLS+  R+  F  C +AG+   FL   +   P   
Sbjct: 3   KLRRVLSGQDDEEQGLTAQVLDA-SSLSFNTRLKWFVICFVAGIFFSFLGTGLLWLPNGM 61

Query: 62  --FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSK 119
             FA+ +T GNL A+ ST F++GP +Q+  MF++ R+ AT + L+C+V  L  AL    K
Sbjct: 62  KLFAVFYTLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWRKK 121

Query: 120 ILTILAIICEICALLWYSLSYIPFAR 145
            L +L  I +  ++ WYSLSYIP+AR
Sbjct: 122 GLALLFCILQFLSMTWYSLSYIPYAR 147

May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.

Mus musculus (taxid: 10090)

>sp|Q5U3Y5|SFT2A_RAT Vesicle transport protein SFT2A OS=Rattus norvegicus GN=Sft2d1 PE=2 SV=1

 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 1   MWKLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP- 59
           M KL+++++G ++ E+       D   SLS+  R+  F  C +AG+    L   +   P 
Sbjct: 1   MEKLRRVLSGQDDEEQGLTAQVLDA-SSLSFNTRLKWFVICFVAGIFFSILGTGLLWLPN 59

Query: 60  -IK-FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIH 117
            +K FA+ +T GNL A+ ST F++GP +Q+  MF++ R+ AT + L+C+V  L  AL   
Sbjct: 60  GVKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCLVFTLCAALWWR 119

Query: 118 SKILTILAIICEICALLWYSLSYIPFAR 145
            K L +L  I +  ++ WYSLSYIP+AR
Sbjct: 120 KKGLALLFCILQFLSMTWYSLSYIPYAR 147

May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.

Rattus norvegicus (taxid: 10116)

>sp|Q4FZV2|SFT2B_RAT Vesicle transport protein SFT2B OS=Rattus norvegicus GN=Sft2d2 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 89/150 (59%), Gaps = 4/150 (2%)

Query: 3   KLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVF--VRPI 60
           KLK++++G +  + S L +  +   SLS++ R+  F  C   G++C  L  ++    R  
Sbjct: 3   KLKKVLSGQDTEDRSGLSEVVE-SSSLSWSTRIKGFIVCFALGILCSLLGTLLLWVSRKG 61

Query: 61  KFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKI 120
            FA+ +T GN+ ++GST F++GP +Q+  MF+  R+ A T+ ++   +  +C+  + +K 
Sbjct: 62  LFAVFYTLGNITSIGSTMFLMGPLKQLKRMFEPTRLIA-TILVLLFFVLTLCSAFLWNKG 120

Query: 121 LTILAIICEICALLWYSLSYIPFARRMISE 150
           L ++  I +  AL WYSLSYIP+AR  + +
Sbjct: 121 LALIFCILQSLALTWYSLSYIPYARDAVKK 150

May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex.

Rattus norvegicus (taxid: 10116)

>sp|Q9P6K1|SFT2_SCHPO Protein transport protein sft2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sft2 PE=3 SV=1

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 5/137 (3%)

Query: 28  SLSYTQRMYAFAACLLAGLVCM----FLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGP 83
           SLS  +R   F  CLL  L C     F+  ++ ++P KF +L+T G+LLAV   A V G 
Sbjct: 61  SLSRWERYMLFGICLLGSLACYAIACFMFPVLVLKPRKFVLLWTMGSLLAVLGFAIVQGF 120

Query: 84  AQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPF 143
                 +    R+  T  Y V ++  +I  + I S IL+I+  +  I + + Y +++ PF
Sbjct: 121 VAHFRQLTTMERLPITLSYFVTLLATIIATIKIKSTILSIVFGVLHILSFVAYLIAFFPF 180

Query: 144 ARRMISELMIRLCDTEL 160
             R +S L  R+    L
Sbjct: 181 GTRTVS-LGTRMASRSL 196

Nonessential protein required for the fusion of transport vesicles derived from the endocytic pathway with the Golgi complex. Can be replaced by got1.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P38166|SFT2_YEAST Protein transport protein SFT2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SFT2 PE=1 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 9/144 (6%)

Query: 15  EESFLEDESDGICSLSYTQRMYAFAACLLAG-----LVCMFLSIIVFVRPIKFAILFTFG 69
            +  ++D+      LS T+RM  F  C L G      +C FL  ++  +P KF +L+T G
Sbjct: 61  RQDLVQDQEPSWFQLSRTERMVLFV-CFLLGATACFTLCTFLFPVLAAKPRKFGLLWTMG 119

Query: 70  NLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICE 129
           +LL V +   ++GP   +  +    R+  +  +     + +  A    + +LTI   + E
Sbjct: 120 SLLFVLAFGVLMGPLAYLKHLTARERLPFSMFFFATCFMTIYFAAFSKNTVLTITCALLE 179

Query: 130 ICALLWYSLSYIPFAR---RMISE 150
           + A+++Y++SY PF     RM+S 
Sbjct: 180 LVAVIYYAISYFPFGATGLRMLSS 203

Nonessential protein required for the fusion of transport vesicles derived from the endocytic pathway with the Golgi complex. Can be partially replaced by GOT1.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
217071622	162	unknown [Medicago truncatula] gi|3885211	1.0	0.987	0.734	1e-62
297812583	163	hypothetical protein ARALYDRAFT_489277 [	1.0	0.981	0.699	2e-60
449455944	160	PREDICTED: vesicle transport protein SFT	1.0	1.0	0.668	8e-59
224132890	161	predicted protein [Populus trichocarpa]	1.0	0.993	0.720	1e-58
224120726	161	predicted protein [Populus trichocarpa]	1.0	0.993	0.714	3e-58
42568053	163	Got1/Sft2-like vescicle transport protei	0.9	0.883	0.75	8e-58
351727108	161	uncharacterized protein LOC100527819 [Gl	1.0	0.993	0.701	4e-56
297596337	166	Os01g0219100 [Oryza sativa Japonica Grou	0.987	0.951	0.652	2e-55
226499158	165	SFT2 domain containing 2 [Zea mays] gi|1	0.968	0.939	0.670	6e-55
223948803	165	unknown [Zea mays] gi|413947764|gb|AFW80	0.968	0.939	0.670	7e-55

>gi|217071622|gb|ACJ84171.1| unknown [Medicago truncatula] gi|388521121|gb|AFK48622.1| unknown [Medicago truncatula]

 Score =  244 bits (622), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 119/162 (73%), Positives = 140/162 (86%), Gaps = 2/162 (1%)

Query: 1   MWK-LKQLVAGD-EEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVR 58
           MWK L + ++GD EE+EES L + S G+ SL+ TQRMY FAACL+AGL  M LS+IVF +
Sbjct: 1   MWKKLGESLSGDNEEQEESLLGEGSGGLSSLTTTQRMYGFAACLIAGLALMLLSMIVFAK 60

Query: 59  PIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHS 118
           PIKFA+LFTFGNL AVGSTAF++GPAQQ+ MMFD  R++AT +YL CVVIALICALLIHS
Sbjct: 61  PIKFAVLFTFGNLSAVGSTAFLLGPAQQMEMMFDPVRVFATAIYLGCVVIALICALLIHS 120

Query: 119 KILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160
           K+LT+LAII EICAL+WYSLSYIPFARRM+SELMIRLCDTEL
Sbjct: 121 KVLTLLAIIIEICALMWYSLSYIPFARRMVSELMIRLCDTEL 162

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812583|ref|XP_002874175.1| hypothetical protein ARALYDRAFT_489277 [Arabidopsis lyrata subsp. lyrata] gi|297320012|gb|EFH50434.1| hypothetical protein ARALYDRAFT_489277 [Arabidopsis lyrata subsp. lyrata]

 Score =  236 bits (603), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/163 (69%), Positives = 137/163 (84%), Gaps = 3/163 (1%)

Query: 1   MWKLKQLVAGD---EEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFV 57
           M KL    +G    EE  +SFLE+ S+G+C+LS TQRMY FAA L  GL+ MFLS+IVF 
Sbjct: 1   MQKLNDFFSGGGDGEETTDSFLEEGSEGLCALSTTQRMYGFAASLATGLLLMFLSMIVFG 60

Query: 58  RPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIH 117
            PIKFA+LFTFGN+LA+GSTAF++GP QQ+NMMFD  R  AT++Y+ CVV+ALICALLIH
Sbjct: 61  IPIKFALLFTFGNVLAIGSTAFLMGPEQQMNMMFDPVRFLATSIYIGCVVVALICALLIH 120

Query: 118 SKILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160
           SKILT+LAI+CEICAL+WYSLSYIPFARRM+SE+MIRLCDTEL
Sbjct: 121 SKILTVLAILCEICALIWYSLSYIPFARRMVSEIMIRLCDTEL 163

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455944|ref|XP_004145710.1| PREDICTED: vesicle transport protein SFT2B-like [Cucumis sativus] gi|449507616|ref|XP_004163083.1| PREDICTED: vesicle transport protein SFT2B-like [Cucumis sativus]

 Score =  231 bits (589), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 107/160 (66%), Positives = 132/160 (82%)

Query: 1   MWKLKQLVAGDEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60
           MWKL + V  DEER +S L+++S+ +CSL+  QR+YAF  CL  G+VCM LS++VF +P+
Sbjct: 1   MWKLSEGVFVDEERSQSLLDEDSEDLCSLTAVQRLYAFGGCLTGGVVCMILSLLVFAKPL 60

Query: 61  KFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKI 120
           K A+LF FGN+LAVGST F+ GP QQI MMFDS RI AT +YL CVV+ALICAL IH+KI
Sbjct: 61  KLAVLFAFGNVLAVGSTTFLFGPRQQIRMMFDSVRILATAIYLGCVVLALICALWIHNKI 120

Query: 121 LTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160
           LT++AII EICAL+WYSLSYIPFARRM+S+LMIR CDTEL
Sbjct: 121 LTVIAIISEICALIWYSLSYIPFARRMVSQLMIRFCDTEL 160

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132890|ref|XP_002321435.1| predicted protein [Populus trichocarpa] gi|222868431|gb|EEF05562.1| predicted protein [Populus trichocarpa]

 Score =  231 bits (588), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 116/161 (72%), Positives = 133/161 (82%), Gaps = 1/161 (0%)

Query: 1   MWKLKQLVAGDEEREESFLEDE-SDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP 59
           MWKL Q + GD+   E    +E SDGI SLS TQRMYAFAA L AGL+ MFLS+IVF +P
Sbjct: 1   MWKLNQFIPGDDGEREESFLEEESDGIFSLSPTQRMYAFAASLAAGLILMFLSLIVFAKP 60

Query: 60  IKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSK 119
           IKFA+LFTFGN+LAVGSTAF+IGP +Q+ MMFD  RIYAT +Y+ CVV+ALI ALLIHSK
Sbjct: 61  IKFALLFTFGNVLAVGSTAFLIGPGRQLGMMFDPVRIYATVIYIGCVVLALIFALLIHSK 120

Query: 120 ILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160
           ILT+ AII EICAL+WY LSYIPFARRM+S LMIRLCDTEL
Sbjct: 121 ILTVFAIIFEICALIWYGLSYIPFARRMVSSLMIRLCDTEL 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120726|ref|XP_002318402.1| predicted protein [Populus trichocarpa] gi|222859075|gb|EEE96622.1| predicted protein [Populus trichocarpa]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 115/161 (71%), Positives = 137/161 (85%), Gaps = 1/161 (0%)

Query: 1   MWKLKQLVAGDEEREESFLEDE-SDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP 59
           MWKL   ++GD+E  E    +E SDG+CSLS TQRMYAFAA L+AGL  MFLS+IVF +P
Sbjct: 1   MWKLNHFLSGDDEEREESFLEEESDGLCSLSPTQRMYAFAASLVAGLALMFLSLIVFAKP 60

Query: 60  IKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSK 119
           IK+A+LFTFGN+LAVGSTAF+IGP +Q+ MMFD ARIYAT +Y+ C+V+ALICALLI+SK
Sbjct: 61  IKYALLFTFGNVLAVGSTAFLIGPGRQLGMMFDPARIYATAIYIGCIVLALICALLINSK 120

Query: 120 ILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160
           ILT+ AII EICAL+WYSLS IPFARRM+S LMIRLCDTEL
Sbjct: 121 ILTVFAIIFEICALIWYSLSSIPFARRMVSNLMIRLCDTEL 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42568053|ref|NP_197805.2| Got1/Sft2-like vescicle transport protein family [Arabidopsis thaliana] gi|48958477|gb|AAT47791.1| At5g24170 [Arabidopsis thaliana] gi|51972054|gb|AAU15131.1| At5g24170 [Arabidopsis thaliana] gi|332005884|gb|AED93267.1| Got1/Sft2-like vescicle transport protein family [Arabidopsis thaliana]

 Score =  228 bits (580), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 108/144 (75%), Positives = 129/144 (89%)

Query: 17  SFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGS 76
           SFLED S+G+C+LS TQRMY FAA L  GL+ MFLS+IVF  PIKFA+LFTFGN+LA+GS
Sbjct: 20  SFLEDGSEGLCALSTTQRMYGFAASLATGLLLMFLSMIVFGIPIKFALLFTFGNVLAIGS 79

Query: 77  TAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWY 136
           TAF++GP QQ++MMFD  R  AT++Y+ CVV+ALICALLIHSKILT+LAI+CEICAL+WY
Sbjct: 80  TAFLMGPEQQMSMMFDPVRFLATSIYIGCVVVALICALLIHSKILTVLAILCEICALIWY 139

Query: 137 SLSYIPFARRMISELMIRLCDTEL 160
           SLSYIPFARRM+SE+MIRLCDTEL
Sbjct: 140 SLSYIPFARRMVSEIMIRLCDTEL 163

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727108|ref|NP_001237917.1| uncharacterized protein LOC100527819 [Glycine max] gi|255633298|gb|ACU17006.1| unknown [Glycine max]

 Score =  222 bits (565), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 113/161 (70%), Positives = 136/161 (84%), Gaps = 1/161 (0%)

Query: 1   MWKLKQLVAGD-EEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP 59
           MW + + + GD E++EE  L ++S G+CSLS TQR+Y FA+CL+AGL CM LS+IVF +P
Sbjct: 1   MWNIARTLTGDNEDQEEGLLGEDSGGLCSLSTTQRIYGFASCLVAGLACMLLSMIVFAKP 60

Query: 60  IKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSK 119
           IKFA LFTFGNLLAVGSTAF++GPAQQ+ MM D  R++AT +YL CV IALICAL IHSK
Sbjct: 61  IKFAALFTFGNLLAVGSTAFLLGPAQQLGMMVDPVRVFATAIYLGCVAIALICALWIHSK 120

Query: 120 ILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160
           +LTI+AII EI AL+WYSLSYIPFARRM+SELMIRLCDTEL
Sbjct: 121 VLTIIAIIIEIGALIWYSLSYIPFARRMVSELMIRLCDTEL 161

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297596337|ref|NP_001042417.2| Os01g0219100 [Oryza sativa Japonica Group] gi|215768762|dbj|BAH00991.1| unnamed protein product [Oryza sativa Japonica Group] gi|218187760|gb|EEC70187.1| hypothetical protein OsI_00920 [Oryza sativa Indica Group] gi|222617994|gb|EEE54126.1| hypothetical protein OsJ_00900 [Oryza sativa Japonica Group] gi|255673004|dbj|BAF04331.2| Os01g0219100 [Oryza sativa Japonica Group]

 Score =  219 bits (559), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/161 (65%), Positives = 133/161 (82%), Gaps = 3/161 (1%)

Query: 3   KLKQLVAG---DEEREESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP 59
           +L + +AG   DEE+ E  +  +++GICSLS  QR+Y FAACL+AGL  M LS++VFVRP
Sbjct: 6   RLHRALAGGDDDEEQPEDSILGDTEGICSLSPVQRVYGFAACLVAGLALMILSLVVFVRP 65

Query: 60  IKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSK 119
           IKFA++FTFGN+LAVGSTAF+IGP+QQ+ MM D  R+YAT +Y   V +ALI AL IHSK
Sbjct: 66  IKFAVMFTFGNILAVGSTAFLIGPSQQLRMMLDPVRVYATAIYGGFVFLALIFALWIHSK 125

Query: 120 ILTILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160
           +LT++AIICEICAL WYSLSYIPFARRM+S+LM++LCDTEL
Sbjct: 126 VLTLIAIICEICALFWYSLSYIPFARRMVSDLMVKLCDTEL 166

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226499158|ref|NP_001149679.1| SFT2 domain containing 2 [Zea mays] gi|195629360|gb|ACG36321.1| SFT2 domain containing 2 [Zea mays]

 Score =  218 bits (555), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 106/158 (67%), Positives = 129/158 (81%), Gaps = 3/158 (1%)

Query: 5   KQLVAGDEE--REESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKF 62
           + LV GD+E   E+S L D  D +CSLS  QR+YAFAACL+AGL  M LS IVF RPIKF
Sbjct: 9   RSLVGGDDEDQSEDSILADTED-LCSLSPLQRIYAFAACLVAGLTLMILSFIVFARPIKF 67

Query: 63  AILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILT 122
           A++FTFGN+LAVGSTAFV+GP +Q+ MMFD  R+YAT VY+ CVV+ALI AL IH K+LT
Sbjct: 68  AVMFTFGNILAVGSTAFVMGPQKQLRMMFDPVRLYATAVYVGCVVLALIFALWIHDKLLT 127

Query: 123 ILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160
           ++A+ICEICAL WYSLSYIP ARRM+S+LM++ CDTEL
Sbjct: 128 LIAVICEICALFWYSLSYIPLARRMVSDLMVKFCDTEL 165

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223948803|gb|ACN28485.1| unknown [Zea mays] gi|413947764|gb|AFW80413.1| SFT2 domain containing 2 [Zea mays]

 Score =  218 bits (555), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 106/158 (67%), Positives = 129/158 (81%), Gaps = 3/158 (1%)

Query: 5   KQLVAGDEER--EESFLEDESDGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKF 62
           + LV GD+E   E+S L D  D +CSLS  QR+YAFAACL+AGL  M LS IVF RPIKF
Sbjct: 9   RSLVGGDDEDQPEDSILADTED-LCSLSPLQRIYAFAACLVAGLTLMILSFIVFARPIKF 67

Query: 63  AILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILT 122
           A++FTFGN+LAVGSTAFV+GP +Q+ MMFD  R+YAT VY+ CVV+ALI AL IH K+LT
Sbjct: 68  AVMFTFGNILAVGSTAFVMGPQKQLRMMFDPVRLYATAVYVGCVVLALIFALWIHDKLLT 127

Query: 123 ILAIICEICALLWYSLSYIPFARRMISELMIRLCDTEL 160
           ++A+ICEICAL WYSLSYIP ARRM+S+LM++ CDTEL
Sbjct: 128 LIAVICEICALFWYSLSYIPLARRMVSDLMVKFCDTEL 165

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
TAIR|locus:2151837	163	AT5G24170 "AT5G24170" [Arabido	0.85	0.834	0.661	2.4e-44
TAIR|locus:2171706	175	AT5G23550 "AT5G23550" [Arabido	0.831	0.76	0.526	1.1e-34
UNIPROTKB|O95562	160	SFT2D2 "Vesicle transport prot	0.931	0.931	0.331	2.7e-20
UNIPROTKB|F6RF48	160	SFT2D2 "Uncharacterized protei	0.931	0.931	0.344	5.7e-20
UNIPROTKB|F1PKN6	140	SFT2D2 "Uncharacterized protei	0.768	0.878	0.370	5.7e-20
UNIPROTKB|F1RPV2	159	SFT2D2 "Uncharacterized protei	0.925	0.930	0.350	1.2e-19
UNIPROTKB|Q3SYY5	159	SFT2D1 "SFT2 domain containing	0.968	0.974	0.331	3.1e-19
MGI|MGI:1917362	159	Sft2d2 "SFT2 domain containing	0.925	0.930	0.318	5.1e-19
UNIPROTKB|Q8WV19	159	SFT2D1 "Vesicle transport prot	0.968	0.974	0.337	1.4e-18
UNIPROTKB|F1SBY3	159	SFT2D1 "Uncharacterized protei	0.968	0.974	0.325	1.4e-18

TAIR|locus:2151837 AT5G24170 "AT5G24170" [Arabidopsis thaliana (taxid:3702)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 90/136 (66%), Positives = 107/136 (78%)

Query:    25 GICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPA 84
             G+C+LS TQRMY FAA L  GL+ MFLS+IVF  PIKFA+LFTFGN+LA+GSTAF++GP 
Sbjct:    28 GLCALSTTQRMYGFAASLATGLLLMFLSMIVFGIPIKFALLFTFGNVLAIGSTAFLMGPE 87

Query:    85 QQINMMFDSARIYATTVYLVCVVIALICALLIHSKXXXXXXXXXXXXXXXWYSLSYIPFA 144
             QQ++MMFD  R  AT++Y+ CVV+ALICALLIHSK               WYSLSYIPFA
Sbjct:    88 QQMSMMFDPVRFLATSIYIGCVVVALICALLIHSKILTVLAILCEICALIWYSLSYIPFA 147

Query:   145 RRMISELMIRLCDTEL 160
             RRM+SE+MIRLCDTEL
Sbjct:   148 RRMVSEIMIRLCDTEL 163

GO:0003674 "molecular_function" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

TAIR|locus:2171706 AT5G23550 "AT5G23550" [Arabidopsis thaliana (taxid:3702)]

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 70/133 (52%), Positives = 89/133 (66%)

Query:    27 CSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQ 86
             C+L+  QR Y FA CL AGL C  LS++VF  P+KF I FT GNL+A+GSTAF+IGP +Q
Sbjct:    42 CALTTKQRFYGFAICLSAGLTCTLLSMLVFFNPVKFGITFTLGNLMALGSTAFLIGPQRQ 101

Query:    87 INMMFDSARIYATTVYLVCVVIALICALLIHSKXXXXXXXXXXXXXXXWYSLSYIPFARR 146
             + MM D ARIYAT +YL  ++IAL CAL + +K               WYSLSYIPFAR 
Sbjct:   102 VTMMLDPARIYATALYLASIIIALFCALYVRNKLLTLLAIILEFTGLIWYSLSYIPFART 161

Query:   147 MISELMIRLCDTE 159
             M+S++ +   DTE
Sbjct:   162 MVSKIFMTCFDTE 174

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

UNIPROTKB|O95562 SFT2D2 "Vesicle transport protein SFT2B" [Homo sapiens (taxid:9606)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 51/154 (33%), Positives = 80/154 (51%)

Query:     1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60
             M KLK++++G                 SLS++ R+  F AC   G++C  L  ++   P 
Sbjct:     1 MDKLKKVLSGQDTEDRSGLSEVVEA-SSLSWSTRIKGFIACFAIGILCSLLGTVLLWVPR 59

Query:    61 K----FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLI 116
             K    FA+ +TFGN+ ++GST F++GP +Q+  MF+  R+ AT + L+C  + L  A   
Sbjct:    60 KGLHLFAVFYTFGNIASIGSTIFLMGPVKQLKRMFEPTRLIATIMVLLCFALTLCSAFWW 119

Query:   117 HSKXXXXXXXXXXXXXXXWYSLSYIPFARRMISE 150
             H+K               WYSLS+IPFAR  + +
Sbjct:   120 HNKGLALIFCILQSLALTWYSLSFIPFARDAVKK 153

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F6RF48 SFT2D2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 53/154 (34%), Positives = 78/154 (50%)

Query:     1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60
             M KLK++++G                 SLS   R+  F AC  AG++C  L  ++   P 
Sbjct:     1 MDKLKKVLSGQDSEDRGGLSEVVEAT-SLSSGTRIKGFIACFAAGILCSLLGTLLLWVPR 59

Query:    61 K----FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLI 116
             K    FA+ +TFGN+ ++GST F++GP  Q+  MF+  R+ AT + L+C  + L  A   
Sbjct:    60 KGLYLFAVFYTFGNIASLGSTVFLMGPMTQLKRMFEPTRLIATVLVLLCFALTLCSAFWW 119

Query:   117 HSKXXXXXXXXXXXXXXXWYSLSYIPFARRMISE 150
             H+K               WYSLSYIPFAR  + +
Sbjct:   120 HNKGLALIFCILQSLALTWYSLSYIPFARDAVKK 153

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1PKN6 SFT2D2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 47/127 (37%), Positives = 71/127 (55%)

Query:    28 SLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPIK----FAILFTFGNLLAVGSTAFVIGP 83
             SLS++ R+  F AC  AG+VC  L  ++   P K    FA+ +TFGN+ ++GST F++GP
Sbjct:     7 SLSWSTRIKGFIACFAAGIVCSLLGTLLLWVPRKGLYLFAVFYTFGNIASIGSTVFLMGP 66

Query:    84 AQQINMMFDSARIYATTVYLVCVVIALICALLIHSKXXXXXXXXXXXXXXXWYSLSYIPF 143
              +Q+  MF+  R+ AT + L+C  + L  A   H K               WYSLS+IP+
Sbjct:    67 MKQLKRMFEPTRLIATIMVLLCFALTLCSAFWWHIKGLALIFCILQSLALTWYSLSFIPY 126

Query:   144 ARRMISE 150
             AR  + +
Sbjct:   127 ARDAVKK 133

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RPV2 SFT2D2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 54/154 (35%), Positives = 78/154 (50%)

Query:     1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60
             M KLK++++G                 SLS   R+  F AC  AG++C  L   +   P 
Sbjct:     1 MDKLKKVLSGQDAEDRGGLSEVAEAT-SLSSGTRIKGFIACFAAGILCSLLGTFLLWVPQ 59

Query:    61 K----FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLI 116
             K    FA+ +TFGN+ ++GST F++GP +Q+  MF+  R+ AT + L+C  + L  A L 
Sbjct:    60 KGLYLFAVFYTFGNIASIGSTVFLMGPMKQLKRMFEPTRLIATILVLLCFALTLCFAFLR 119

Query:   117 HSKXXXXXXXXXXXXXXXWYSLSYIPFARRMISE 150
             H K               WYSLSYIPFAR  + +
Sbjct:   120 H-KGLALIFCILQSLALTWYSLSYIPFARDAVKK 152

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q3SYY5 SFT2D1 "SFT2 domain containing 1" [Bos taurus (taxid:9913)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 54/163 (33%), Positives = 85/163 (52%)

Query:     1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP- 59
             M KL+++++G                 +LS+  R+  FA C ++G+    L   +   P 
Sbjct:     1 MEKLRRVLSGQDDEEQGLTAQVLDA-STLSFNTRLKWFAICFVSGIFFSILGTGLLWLPG 59

Query:    60 -IK-FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIH 117
              IK FA+ +TFGN+ A+ ST F++GP +Q+  MF++ R+ AT + L+C V+ L  AL  H
Sbjct:    60 GIKLFAVFYTFGNIAALASTCFLMGPVKQLKKMFETTRLLATVIMLLCFVLTLCAALWWH 119

Query:   118 SKXXXXXXXXXXXXXXXWYSLSYIPFARRMISELMIRLCDTEL 160
              K               WYSLSYIP+AR    + +I+ C + L
Sbjct:   120 KKGLAVLFCILQFLSMTWYSLSYIPYAR----DAVIKCCSSLL 158

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1917362 Sft2d2 "SFT2 domain containing 2" [Mus musculus (taxid:10090)]

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 49/154 (31%), Positives = 80/154 (51%)

Query:     1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRPI 60
             M KLK++++G                 SLS+  R+  F AC   G++C  L  ++   P 
Sbjct:     1 MDKLKKVLSGQDTEDRSGLSEVVEA-SSLSWGTRIKGFIACFALGILCSVLGTLLLWVPR 59

Query:    61 K----FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLI 116
             K    FA+ +T GN++++GST F++GP +Q+  MF+  R+ AT + L+C  + L C+  +
Sbjct:    60 KGLGLFAVFYTLGNIMSIGSTVFLMGPLKQLKRMFEPTRLIATILVLLCFALTL-CSAFL 118

Query:   117 HSKXXXXXXXXXXXXXXXWYSLSYIPFARRMISE 150
              +K               WYSLSYIP+AR  + +
Sbjct:   119 WNKGLALIFCILQSLALTWYSLSYIPYARDAVKK 152

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

UNIPROTKB|Q8WV19 SFT2D1 "Vesicle transport protein SFT2A" [Homo sapiens (taxid:9606)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 55/163 (33%), Positives = 82/163 (50%)

Query:     1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP- 59
             M KL+++++G                 SLS+  R+  FA C + G+    L   +   P 
Sbjct:     1 MEKLRRVLSGQDDEEQGLTAQVLDA-SSLSFNTRLKWFAICFVCGVFFSILGTGLLWLPG 59

Query:    60 -IK-FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIH 117
              IK FA+ +T GNL A+ ST F++GP +Q+  MF++ R+ AT V L+C +  L  AL  H
Sbjct:    60 GIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCFIFTLCAALWWH 119

Query:   118 SKXXXXXXXXXXXXXXXWYSLSYIPFARRMISELMIRLCDTEL 160
              K               WYSLSYIP+AR    + +I+ C + L
Sbjct:   120 KKGLAVLFCILQFLSMTWYSLSYIPYAR----DAVIKCCSSLL 158

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1SBY3 SFT2D1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 53/163 (32%), Positives = 85/163 (52%)

Query:     1 MWKLKQLVAGXXXXXXXXXXXXXXGICSLSYTQRMYAFAACLLAGLVCMFLSIIVFVRP- 59
             M KL+++++G                 +LS+  R+  F  C ++G+   FL   +   P 
Sbjct:     1 MEKLRRVLSGQDDEEQGLTAQVLDA-STLSFNTRLKWFVICFVSGIFFSFLGTGLLWLPG 59

Query:    60 -IK-FAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIH 117
              IK FA+ +TFGN+ A+ ST F++GP +Q+  MF++ R+ AT V ++C+V+ L  AL   
Sbjct:    60 GIKLFAVFYTFGNIAALASTCFLMGPVKQLKKMFETTRLLATIVMILCLVLTLCAALWWR 119

Query:   118 SKXXXXXXXXXXXXXXXWYSLSYIPFARRMISELMIRLCDTEL 160
              K               WYSLSYIP+AR    + +I+ C + L
Sbjct:   120 KKGLALLFCILQFLSLTWYSLSYIPYAR----DAVIKCCSSLL 158

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O95562	SFT2B_HUMAN	No assigned EC number	0.3684	0.9187	0.9187	yes	no
Q5U3Y5	SFT2A_RAT	No assigned EC number	0.3716	0.9	0.9056	yes	no
Q8VD57	SFT2B_MOUSE	No assigned EC number	0.3552	0.9125	0.9182	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh2_kg.6__2411__AT5G24170.1 annotation not avaliable (163 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	160
pfam04178	116	pfam04178, Got1, Got1/Sft2-like family	2e-28
COG5102	201	COG5102, SFT2, Membrane protein involved in ER to	2e-17

>gnl|CDD|217941 pfam04178, Got1, Got1/Sft2-like family

 Score =  101 bits (253), Expect = 2e-28
 Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 4/111 (3%)

Query: 43  LAGLVCMFLSIIVFVRPI----KFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYA 98
             G++   L       P+     FA+L T GN+L +GST F+IGP +Q+  MF   R+ A
Sbjct: 1   KIGVLFFGLGFFFLFLPVLLLFPFALLLTLGNILFLGSTGFLIGPKKQLKFMFSKERLPA 60

Query: 99  TTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFARRMIS 149
           T V+ V +V+ L  AL++ S  LT+L  I +I AL+WY LSYIP  R  + 
Sbjct: 61  TIVFFVSLVLTLYFALILKSYGLTLLFSIFQILALIWYLLSYIPGGRPGVK 111

Traffic through the yeast Golgi complex depends on a member of the syntaxin family of SNARE proteins, Sed5, present in early Golgi cisternae. Got1 is thought to facilitate Sed5-dependent fusion events. This is a family of sequences derived from eukaryotic proteins. They are similar to a region of a SNARE-like protein required for traffic through the Golgi complex, SFT2 protein. This is a conserved protein with four putative transmembrane helices, thought to be involved in vesicular transport in later Golgi compartments. Length = 116

>gnl|CDD|227433 COG5102, SFT2, Membrane protein involved in ER to Golgi transport [Intracellular trafficking and secretion]

 Score = 75.3 bits (185), Expect = 2e-17
 Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 28  SLSYTQRMYAFAACLLAGLVCM----FLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGP 83
            LS  +R   F+ACLL    C     F+  ++ ++P KF +L+T G+LL V    F++G 
Sbjct: 61  GLSRFERAVLFSACLLGAGACSAFLYFMFPVLRLKPRKFILLWTMGSLLFVLMFGFLLGF 120

Query: 84  AQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPF 143
              +  +    R+  ++ +    ++ +   L     +L I     ++ + + YS+++ PF
Sbjct: 121 RAYLEGLTSKERLPHSSWFFGTTLLTIYVVLKYKRTLLNIAFCFLQVVSFIMYSITFFPF 180

Query: 144 ARRMISEL 151
               +S +
Sbjct: 181 GTSGVSSI 188

Length = 201

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	160
KOG2887	175	consensus Membrane protein involved in ER to Golgi	100.0
PF04178	118	Got1: Got1/Sft2-like family ; InterPro: IPR007305	100.0
COG5102	201	SFT2 Membrane protein involved in ER to Golgi tran	99.96
KOG1743	137	consensus Ferric reductase-like proteins [Inorgani	93.21
COG5120	129	GOT1 Membrane protein involved in Golgi transport	91.88
PRK11588	506	hypothetical protein; Provisional	91.22

>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=7.2e-49  Score=310.08  Aligned_cols=158  Identities=44%  Similarity=0.771  Sum_probs=140.9

Q ss_pred             Chhhh------hhhcCCh-hh---hhhhhhhhccc-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhHHHHH
Q 031391            1 MWKLK------QLVAGDE-ER---EESFLEDESDG-ICSLSYTQRMYAFAACLLAGLVCMFLSIIVFV----RPIKFAIL   65 (160)
Q Consensus         1 m~~l~------~~~~~~~-~~---~e~~~~~~~~~-~~~LS~~qRi~gF~~c~~~g~~~~~ls~~~l~----~p~kFa~l   65 (160)
                      |||++      +.+.++| .|   ||++..+|.++ .++|||+||+++|++|++.|++|+.++.+++.    .|+|||++
T Consensus         1 md~l~~~~~~~~~~sg~d~~~~~~~~~~~~~~~~~~~fsLs~~qR~~~F~~cl~~gv~c~~l~~~lf~v~~~~~~kFal~   80 (175)
T KOG2887|consen    1 MDKLRSARSANDVLSGQDPGDHQTEERSFTSDLQESTFSLSRTQRIMGFGICLAGGVLCFLLAMVLFPVLVVSPRKFALL   80 (175)
T ss_pred             CchhhhhHhhhhcccCCCCCccccccccchhhhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeehh
Confidence            78888      4443332 22   34455555554 59999999999999999999999999998764    57799999


Q ss_pred             HHHHHHHHHhhHHHhhcHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhccccHH
Q 031391           66 FTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFAR  145 (160)
Q Consensus        66 ~TlGsil~l~s~~FL~Gp~~q~k~m~~~~R~~~t~~yi~sl~~TL~~a~~~~s~~l~ll~~i~Q~~al~wY~lSyiP~G~  145 (160)
                      ||+||+++++|++||+||++|+|||++|+|+++|+.|++++++|+|+|+++||++|+++++++|++|++||++|||||||
T Consensus        81 ~TlGnll~i~sf~fLmGP~~ql~~m~~p~Rl~~T~~~l~~~~~Tly~al~~ks~iLtllf~ilq~laliwYslSyiP~g~  160 (175)
T KOG2887|consen   81 YTLGNLLAIGSFAFLMGPVSQLKHMFSPERLPATLSYLATMVLTLYVALWLKSKILTLLFCILQVLALIWYSLSYIPFGR  160 (175)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhccC
Q 031391          146 RMISELMIRLCDT  158 (160)
Q Consensus       146 ~~~~~~~~~~~~~  158 (160)
                      ++++++.+.+...
T Consensus       161 ~gv~~~~s~~~~s  173 (175)
T KOG2887|consen  161 SGVSKLSSAFTSS  173 (175)
T ss_pred             hHHHHHHHHHHHh
Confidence            9999999988654

>PF04178 Got1: Got1/Sft2-like family ; InterPro: IPR007305 Traffic through the yeast Golgi complex depends on a member of the syntaxin family of SNARE proteins, Sed5, present in early Golgi cisternae

Probab=100.00  E-value=4.4e-35  Score=219.91  Aligned_cols=113  Identities=40%  Similarity=0.777  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHHHhhcHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHhhHH
Q 031391           40 ACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALICALLIHSK  119 (160)
Q Consensus        40 ~c~~~g~~~~~ls~~~l~~p~kFa~l~TlGsil~l~s~~FL~Gp~~q~k~m~~~~R~~~t~~yi~sl~~TL~~a~~~~s~  119 (160)
                      +|+++|.++.+++.++ .+|+|||++||+||+++++|++||+||++|+|+|+||+|+++|++|++++++|++++++.|++
T Consensus         5 ~~~~l~~~~~~~~~~~-~~~~kFa~l~tlGnil~l~s~~fL~Gp~~q~k~m~~~~R~~~t~~y~~~l~~tl~~~~~~~~~   83 (118)
T PF04178_consen    5 ICFFLSLIFFFLGVLL-FFPRKFAILYTLGNILFLASTFFLIGPKKQFKFMFSPKRLIATIIYFISLILTLYFAFILKSY   83 (118)
T ss_pred             HHHHHHHHHHHhhhhh-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHhhH
Confidence            4666666666666644 899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Q 031391          120 ILTILAIICEICALLWYSLSYIPFARRMISELMI  153 (160)
Q Consensus       120 ~l~ll~~i~Q~~al~wY~lSyiP~G~~~~~~~~~  153 (160)
                      .++++++++|++|++||++||+||||++++++++
T Consensus        84 ~l~llf~~~q~~al~wy~~s~iP~g~~~~~~~~~  117 (118)
T PF04178_consen   84 GLTLLFSIFQFPALIWYLLSYIPFGRPGLKKFFS  117 (118)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHhc
Confidence            9999999999999999999999999999999986

Got1 is thought to facilitate Sed5-dependent fusion events []. This is a family of sequences derived from eukaryotic proteins. They are similar to a region of a SNARE-like protein required for traffic through the Golgi complex, SFT2 protein (P38166 from SWISSPROT) []. This is a conserved protein with four putative transmembrane helices, thought to be involved in vesicular transport in later Golgi compartments []. ; GO: 0016192 vesicle-mediated transport

>COG5102 SFT2 Membrane protein involved in ER to Golgi transport [Intracellular trafficking and secretion]

Probab=99.96  E-value=1.7e-29  Score=199.66  Aligned_cols=131  Identities=22%  Similarity=0.421  Sum_probs=120.8

Q ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----hhhhhHHHHHHHHHHHHHHhhHHHhhcHHHHHHhhcccchHHHHH
Q 031391           25 GICSLSYTQRMYAFAACLLAGLVCMFLSIIV----FVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATT  100 (160)
Q Consensus        25 ~~~~LS~~qRi~gF~~c~~~g~~~~~ls~~~----l~~p~kFa~l~TlGsil~l~s~~FL~Gp~~q~k~m~~~~R~~~t~  100 (160)
                      ..++||+.||...|.+|+..+..|+.+..++    -.+|+||.++||+||++++.+++++.||.+|+|+++++||++.+.
T Consensus        58 s~F~Lsr~eR~vlF~~ClLGa~ac~a~~~fmfpVl~lkPrkFiLlwTmgslLfvl~Fg~l~Gf~ayl~~Lts~erlp~s~  137 (201)
T COG5102          58 SEFGLSRFERAVLFSACLLGAGACSAFLYFMFPVLRLKPRKFILLWTMGSLLFVLMFGFLLGFRAYLEGLTSKERLPHSS  137 (201)
T ss_pred             chhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCccceeeehhHHHHHHHHHHHHHHhHHHHHHhhhhhhccchhH
Confidence            4689999999999999977777777555443    368999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHhh
Q 031391          101 VYLVCVVIALICALLIHSKILTILAIICEICALLWYSLSYIPFARRMISELMIRL  155 (160)
Q Consensus       101 ~yi~sl~~TL~~a~~~~s~~l~ll~~i~Q~~al~wY~lSyiP~G~~~~~~~~~~~  155 (160)
                      .|+++..+|+|+++..|++++++.|+++|++++++|+++|+|||.++++...+..
T Consensus       138 ~ff~t~l~Tiy~~~k~k~t~L~i~f~~l~vvsfi~y~itffPfGt~gvs~~~sm~  192 (201)
T COG5102         138 WFFGTTLLTIYVVLKYKRTLLNIAFCFLQVVSFIMYSITFFPFGTSGVSSIISMF  192 (201)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999876653

>KOG1743 consensus Ferric reductase-like proteins [Inorganic ion transport and metabolism]

Probab=93.21  E-value=0.14  Score=39.55  Aligned_cols=109  Identities=19%  Similarity=0.329  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHHHhhcHHHHHHhhcccchHHHHHHHHHHHHHHHH----HHHH
Q 031391           40 ACLLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALI----CALL  115 (160)
Q Consensus        40 ~c~~~g~~~~~ls~~~l~~p~kFa~l~TlGsil~l~s~~FL~Gp~~q~k~m~~~~R~~~t~~yi~sl~~TL~----~a~~  115 (160)
                      ...+.|+.+++.+.+++..-.    +-++||++.+.+..++.|.++-+.-.++|+|.--|+.+....+.+++    ..+.
T Consensus        12 g~TgfG~ff~l~Gii~ffD~a----LLa~GNlLfi~GvsliiG~~~t~~FF~r~~k~kGti~F~~G~l~vl~~wPi~Gm~   87 (137)
T KOG1743|consen   12 GLTGFGVFFFLFGIILFFDKA----LLAMGNLLFIIGVSLIIGFRKTMQFFFRRQKMKGTISFLGGVLLVLFGWPIFGMI   87 (137)
T ss_pred             EEechhHHHHHHHHHHHHhhH----HHHhcchHHHHhHHHhhcchhhhhhheehhhcceeeehhhhHHHHHHhhHHHHHH
Confidence            345667777777776655433    44569999999999999999999999999999999999999888874    4455


Q ss_pred             hhHHHHHHHHH-----HHHHHHHH--HHHhhccccHHHHHHHHH
Q 031391          116 IHSKILTILAI-----ICEICALL--WYSLSYIPFARRMISELM  152 (160)
Q Consensus       116 ~~s~~l~ll~~-----i~Q~~al~--wY~lSyiP~G~~~~~~~~  152 (160)
                      .-+|-+-+++-     +++++--+  -=.+-+.|+=|+-+.+.+
T Consensus        88 lE~~Gff~LF~gF~P~i~~flrs~p~lG~i~~~p~i~~~~drl~  131 (137)
T KOG1743|consen   88 LETYGFFVLFRGFFPVIVVFLRSIPVLGWILNLPGIRSFLDRLA  131 (137)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHcCccccccccCccHHHHHHHhc
Confidence            55655544443     33433211  113457777776655543

>COG5120 GOT1 Membrane protein involved in Golgi transport [Intracellular trafficking and secretion]

Probab=91.88  E-value=0.31  Score=36.95  Aligned_cols=66  Identities=18%  Similarity=0.431  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhHHHhhcHHHHHHhhcccchHHHHHHHHHHHHHHHH
Q 031391           42 LLAGLVCMFLSIIVFVRPIKFAILFTFGNLLAVGSTAFVIGPAQQINMMFDSARIYATTVYLVCVVIALI  111 (160)
Q Consensus        42 ~~~g~~~~~ls~~~l~~p~kFa~l~TlGsil~l~s~~FL~Gp~~q~k~m~~~~R~~~t~~yi~sl~~TL~  111 (160)
                      ..+|.+++..+.+++..-.    +-++||++.+.+...+.|.+|-.--...|+|+--++.|.....+++|
T Consensus        14 t~~Gflffl~Gif~ffDra----Ll~lGNlL~iiG~fliags~ks~~fflRp~k~~Gsv~F~~G~ll~l~   79 (129)
T COG5120          14 TSIGFLFFLVGIFLFFDRA----LLILGNLLMIIGIFLIAGSRKSMFFFLRPEKIQGSVIFAMGVLLLLY   79 (129)
T ss_pred             eehhHHHHHHHHHHHhhhH----HHHhcCHHHHHHHHHHhcccceEEEEEchhHhhhhHHHHHHHHHHHH
Confidence            3456667777766554322    45679999999999999999888888899999999999999988875

>PRK11588 hypothetical protein; Provisional

Probab=91.22  E-value=3.6  Score=38.18  Aligned_cols=52  Identities=12%  Similarity=0.187  Sum_probs=31.6

Q ss_pred             HhhHHHhhcHHHHHHhhc-----ccchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 031391           74 VGSTAFVIGPAQQINMMF-----DSARIYATTVYLVCVVIALICALLIHSKILTILAIICEI  130 (160)
Q Consensus        74 l~s~~FL~Gp~~q~k~m~-----~~~R~~~t~~yi~sl~~TL~~a~~~~s~~l~ll~~i~Q~  130 (160)
                      +.+.+++.|..+++.-++     +.....-|++|..+-.+.     ..++.+..+...++|.
T Consensus       353 m~~~aliig~A~~i~~il~~g~~~~g~iidTIv~~~~~~L~-----~lp~~~~ai~m~i~~~  409 (506)
T PRK11588        353 MLAPALLVGFAKGILLLLGGGEPGDPSVLNTILNSAGGAIS-----GLPDAVSAWFMLLFQS  409 (506)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCccccchHHHHHHHHHHHhc-----cCCHHHHHHHHHHHHH
Confidence            456677777777777777     555577777776663322     3344555555555554

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00