Citrus Sinensis ID: 031462

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACKEIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAARI
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEhgfvigpsfelpahfspiyfpmgnaatgFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACKEIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAARI
Flexible Loop (DISEMBL)
MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACKEIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAARI
Low Complexity Region (SEG)
MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPaaasaatiawtltllaaGFACKEIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAARI
Disordered region (IsUnstruct)
********VASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACKEIELHIRNARLRTMEAFLIILSVTQLLYIAAIHG*****
Disordered Region (DISOPRED)
***********LLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACKEIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAAR*
Disordered Region (DISEMBL)
MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACKEIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAARI
Disordered Region (DISPRO)
*****MKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACKEIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAA**
Transmembrane Helix (TMHMM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiii
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACKEIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAARI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
255557447	162	conserved hypothetical protein [Ricinus	0.981	0.962	0.852	1e-71
351726812	160	uncharacterized protein LOC100527291 [Gl	0.987	0.981	0.796	9e-69
356525351	160	PREDICTED: uncharacterized protein LOC10	0.987	0.981	0.770	5e-67
356530535	160	PREDICTED: uncharacterized protein LOC10	0.987	0.981	0.783	1e-66
388494530	160	unknown [Lotus japonicus]	0.987	0.981	0.789	2e-66
255638354	160	unknown [Glycine max]	0.987	0.981	0.783	4e-66
351724323	162	uncharacterized protein LOC100527398 [Gl	0.987	0.969	0.757	3e-65
224116712	162	predicted protein [Populus trichocarpa]	0.987	0.969	0.796	2e-63
297794597	157	hypothetical protein ARALYDRAFT_330772 [	0.968	0.980	0.766	3e-63
225463366	159	PREDICTED: uncharacterized protein LOC10	0.962	0.962	0.790	4e-63

>gi|255557447|ref|XP_002519754.1| conserved hypothetical protein [Ricinus communis] gi|223541171|gb|EEF42727.1| conserved hypothetical protein [Ricinus communis]

 Score =  274 bits (700), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 133/156 (85%), Positives = 142/156 (91%)

Query: 1   MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
           M N+QMKPVASLLLVLNFCM+ IVLGIG WAMNRAI+HGFVIGP F+LPAHFSPIYFPMG
Sbjct: 1   MANSQMKPVASLLLVLNFCMYAIVLGIGSWAMNRAIDHGFVIGPGFDLPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACK 120
           NAATGFFVTFALIAGVVGAAS +AGLNH+R W ADS+PAAAS ATIAW+LTLLA GF CK
Sbjct: 61  NAATGFFVTFALIAGVVGAASALAGLNHIRSWNADSLPAAASVATIAWSLTLLAMGFGCK 120

Query: 121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGA 156
           EIELH RNARLRTMEAFLIIL+ TQLLYIAAIH  A
Sbjct: 121 EIELHNRNARLRTMEAFLIILAATQLLYIAAIHTAA 156

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726812|ref|NP_001237651.1| uncharacterized protein LOC100527291 [Glycine max] gi|255632019|gb|ACU16362.1| unknown [Glycine max]

 Score =  264 bits (675), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 125/157 (79%), Positives = 142/157 (90%)

Query: 1   MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
           M N QMKP+A+LLL LNFCM+VIVLGIGGWAMNRAI+HGFVIGP F+LPAHFSPIYFPMG
Sbjct: 1   MANDQMKPIATLLLGLNFCMYVIVLGIGGWAMNRAIDHGFVIGPGFDLPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACK 120
           NAATGFFVTFALIAGV G  S I+G+NHVR WT++S+P+AAS A+IAW LT+LA GFACK
Sbjct: 61  NAATGFFVTFALIAGVAGVGSIISGVNHVRSWTSESLPSAASVASIAWALTVLAMGFACK 120

Query: 121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAA 157
           EIEL++RNARL+TMEAF+IILS TQL YIAAIHG AA
Sbjct: 121 EIELNVRNARLKTMEAFMIILSATQLFYIAAIHGAAA 157

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525351|ref|XP_003531288.1| PREDICTED: uncharacterized protein LOC100781792 [Glycine max]

 Score =  258 bits (660), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 121/157 (77%), Positives = 142/157 (90%)

Query: 1   MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
           M N QMKP+A+LLL LNFCM+ IVLGIGGWAMNRAI+HGF+IGP  +LPAHFSP++FPMG
Sbjct: 1   MANEQMKPIATLLLGLNFCMYAIVLGIGGWAMNRAIDHGFIIGPELKLPAHFSPLFFPMG 60

Query: 61  NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACK 120
           NA+TGFFVTFAL+AGVVGAAS I+G+NH+R WT++S+P+AAS AT+AWTLTLLA GFA K
Sbjct: 61  NASTGFFVTFALLAGVVGAASAISGINHIRSWTSESLPSAASVATMAWTLTLLAMGFAWK 120

Query: 121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAA 157
           EIE+HIRNARL+TMEAF+IILS TQL YI AIHG AA
Sbjct: 121 EIEIHIRNARLKTMEAFVIILSATQLFYIVAIHGAAA 157

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530535|ref|XP_003533836.1| PREDICTED: uncharacterized protein LOC100780911 [Glycine max]

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 123/157 (78%), Positives = 139/157 (88%)

Query: 1   MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
           M   QMKP+A+LLL LNFCM+VIVLGIGGWAMNRAI+HGFVIGP F+LPAHFSPIYFPMG
Sbjct: 1   MATDQMKPIATLLLGLNFCMYVIVLGIGGWAMNRAIDHGFVIGPGFDLPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACK 120
           NAATGFFVTFALIAGV G  S I+G+NHVR WT++S+P+AAS A+IAW LT+LA GFACK
Sbjct: 61  NAATGFFVTFALIAGVAGVGSIISGVNHVRSWTSESLPSAASVASIAWALTVLAMGFACK 120

Query: 121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAA 157
           EI+L  RNARL+TMEAF+IILS TQL YIAAIHG AA
Sbjct: 121 EIQLTGRNARLKTMEAFMIILSATQLFYIAAIHGAAA 157

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494530|gb|AFK35331.1| unknown [Lotus japonicus]

 Score =  256 bits (655), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 124/157 (78%), Positives = 140/157 (89%)

Query: 1   MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
           M N QMKP+A+LLL LNFCM+VIVLGIGGWAMNRAI+ GF+IGP  +LPAHFSPI+FPMG
Sbjct: 1   MANEQMKPIATLLLGLNFCMYVIVLGIGGWAMNRAIDQGFIIGPELQLPAHFSPIFFPMG 60

Query: 61  NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACK 120
           NA+TGFFVTFALIAGVVGAAS I+G+NH+  WTA+S+P+AAS AT AWTLTLLA GFA K
Sbjct: 61  NASTGFFVTFALIAGVVGAASAISGINHICSWTAESLPSAASVATTAWTLTLLAMGFAWK 120

Query: 121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAA 157
           E+EL IRNARL+TMEAFLIILS TQL YIAAIHG AA
Sbjct: 121 EVELRIRNARLKTMEAFLIILSATQLFYIAAIHGAAA 157

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638354|gb|ACU19489.1| unknown [Glycine max]

 Score =  255 bits (651), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 123/157 (78%), Positives = 138/157 (87%)

Query: 1   MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
           M   QMKP+A+LLL LNFCM+VIVLGIGGWAMNRAI+HGFVIGP F+LPAHFSPIYFPMG
Sbjct: 1   MATDQMKPIATLLLGLNFCMYVIVLGIGGWAMNRAIDHGFVIGPGFDLPAHFSPIYFPMG 60

Query: 61  NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACK 120
           NAATGFFVTFALIAGV G  S I+G+NHVR WT++S+P AAS A+IAW LT+LA GFACK
Sbjct: 61  NAATGFFVTFALIAGVAGVGSIISGVNHVRSWTSESLPFAASVASIAWALTVLAMGFACK 120

Query: 121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAA 157
           EI+L  RNARL+TMEAF+IILS TQL YIAAIHG AA
Sbjct: 121 EIQLTGRNARLKTMEAFMIILSATQLFYIAAIHGAAA 157

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724323|ref|NP_001235518.1| uncharacterized protein LOC100527398 [Glycine max] gi|255632258|gb|ACU16487.1| unknown [Glycine max]

 Score =  253 bits (645), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 119/157 (75%), Positives = 139/157 (88%)

Query: 1   MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
           M   QMKP+A+LLL LNFCM+ IVLGIGGWAMNRAI+HGF+IGP  +LPAHFSP++FPMG
Sbjct: 1   MAKEQMKPIATLLLGLNFCMYAIVLGIGGWAMNRAIDHGFIIGPELKLPAHFSPLFFPMG 60

Query: 61  NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACK 120
           NA+TGFFVTFAL+AGVVGAAS I+G+NH++ WTA+S+P+AAS AT+AWTLTLLA GFA K
Sbjct: 61  NASTGFFVTFALLAGVVGAASAISGINHIQSWTAESLPSAASVATMAWTLTLLAMGFAWK 120

Query: 121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAA 157
           EIEL IRNARL+TMEAF+IILS TQL YI AIH  AA
Sbjct: 121 EIELRIRNARLKTMEAFIIILSATQLFYIVAIHSAAA 157

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116712|ref|XP_002331859.1| predicted protein [Populus trichocarpa] gi|222875377|gb|EEF12508.1| predicted protein [Populus trichocarpa]

 Score =  246 bits (628), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 125/157 (79%), Positives = 140/157 (89%)

Query: 1   MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
           +++ Q+K VA LLLVLNFCM+VIVLGIGGWAMNRAI+HGF+IGP F+LPAHFSPIYFPMG
Sbjct: 2   VLSQQIKLVALLLLVLNFCMYVIVLGIGGWAMNRAIDHGFIIGPGFDLPAHFSPIYFPMG 61

Query: 61  NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACK 120
           NAATGFFV FALIAGVVG AS I GLNH+R WT DS+P+AAS A ++WTLTLLA GFA K
Sbjct: 62  NAATGFFVMFALIAGVVGVASAIVGLNHIRTWTGDSLPSAASVAAVSWTLTLLAMGFAWK 121

Query: 121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGAA 157
           EIEL IRNARLRTMEAFLIILS TQLLYIAAIHG ++
Sbjct: 122 EIELSIRNARLRTMEAFLIILSATQLLYIAAIHGASS 158

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297794597|ref|XP_002865183.1| hypothetical protein ARALYDRAFT_330772 [Arabidopsis lyrata subsp. lyrata] gi|297311018|gb|EFH41442.1| hypothetical protein ARALYDRAFT_330772 [Arabidopsis lyrata subsp. lyrata]

 Score =  246 bits (628), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 118/154 (76%), Positives = 135/154 (87%)

Query: 1   MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
           MV  QMKPVAS LLVLNFCM+ IVLGIG W+MN+AI HGF+IG  + LPAHFSPI+FPMG
Sbjct: 1   MVEQQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMG 60

Query: 61  NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACK 120
           NAATGFF+ FALIAGV GAAS I+G++H++ WT+ S+PAA SAATIAW+LTLLA GF CK
Sbjct: 61  NAATGFFIMFALIAGVAGAASVISGVSHLQSWTSTSLPAAVSAATIAWSLTLLAMGFGCK 120

Query: 121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHG 154
           EIEL +RNARLRTMEAFLIILS TQLLYIAAI+G
Sbjct: 121 EIELGMRNARLRTMEAFLIILSATQLLYIAAIYG 154

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463366|ref|XP_002272619.1| PREDICTED: uncharacterized protein LOC100253821 [Vitis vinifera] gi|297740625|emb|CBI30807.3| unnamed protein product [Vitis vinifera]

 Score =  245 bits (626), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 121/153 (79%), Positives = 132/153 (86%)

Query: 6   MKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATG 65
           +K  ASLLLVLNFCM+ +VLGIGGWAMNRAI+HGF+IGP F LPAHFSPIYFPMG+AATG
Sbjct: 4   LKSAASLLLVLNFCMYGVVLGIGGWAMNRAIDHGFIIGPDFYLPAHFSPIYFPMGDAATG 63

Query: 66  FFVTFALIAGVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACKEIELH 125
           FFV FALIAGVVGAAS I GLNHVR W  DSMPAA SAATIAW+LTLLA GFA KEI L 
Sbjct: 64  FFVLFALIAGVVGAASAIVGLNHVRSWHLDSMPAAVSAATIAWSLTLLAMGFAWKEISLG 123

Query: 126 IRNARLRTMEAFLIILSVTQLLYIAAIHGGAAR 158
            RNA+LRTMEAF+IILS TQL+YI +IHG  AR
Sbjct: 124 FRNAKLRTMEAFIIILSATQLMYIISIHGSTAR 156

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	159
TAIR|locus:2013708	158	AT1G29520 "AT1G29520" [Arabido	0.968	0.974	0.714	2.3e-55
TAIR|locus:2151486	157	AT5G46530 "AT5G46530" [Arabido	0.968	0.980	0.675	1e-52
TAIR|locus:2179639	171	AT5G18970 "AT5G18970" [Arabido	0.974	0.906	0.406	3.2e-26
TAIR|locus:2197823	186	AT1G04560 "AT1G04560" [Arabido	0.899	0.768	0.401	2.9e-23

TAIR|locus:2013708 AT1G29520 "AT1G29520" [Arabidopsis thaliana (taxid:3702)]

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 110/154 (71%), Positives = 123/154 (79%)

Query:     1 MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
             M   Q+KPVAS LLVLNFCM+VIVLGIGGWAMNRAI+HGF +GP+ ELPAHFSPIYFPMG
Sbjct:     1 MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query:    61 NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPXXXXXXXXXXXXXXXXXGFACK 120
             NAATGFFV FAL+AGVVGAAS I+GL+H+R WT  S+P                 GFA K
Sbjct:    61 NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query:   121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHG 154
             EIEL  RNA+LRTMEAFLIILSVTQL+YIAA+HG
Sbjct:   121 EIELQGRNAKLRTMEAFLIILSVTQLIYIAAVHG 154

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2151486 AT5G46530 "AT5G46530" [Arabidopsis thaliana (taxid:3702)]

 Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
 Identities = 104/154 (67%), Positives = 119/154 (77%)

Query:     1 MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
             MV  QMKPVAS LLVLNFCM+ IVLGIG W+MN+AI HGF+IG  + LPAHFSPI+FPMG
Sbjct:     1 MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMG 60

Query:    61 NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPXXXXXXXXXXXXXXXXXGFACK 120
             NAATGFF+ FALIAGV GAAS I+G++H++ WT  S+P                 GF CK
Sbjct:    61 NAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCK 120

Query:   121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHG 154
             EIEL +RNARLRTMEAFLIILS TQLLYIAAI+G
Sbjct:   121 EIELGMRNARLRTMEAFLIILSATQLLYIAAIYG 154

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2179639 AT5G18970 "AT5G18970" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 63/155 (40%), Positives = 83/155 (53%)

Query:     1 MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
             M +   K  A +LL+LN  ++ ++  I  WA+N  IE       +  LPA   PIYFP+G
Sbjct:     1 MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query:    61 NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPXXXXXXXXXXXXXXXXXGFACK 120
             N ATGFFV F LIAGVVG A+ + G+ +V  W + ++                  G ACK
Sbjct:    61 NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query:   121 EIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGG 155
             EI +    A LRT+E   II+S TQLL   AIH G
Sbjct:   121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAIHAG 155

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2197823 AT1G04560 "AT1G04560" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 63/157 (40%), Positives = 86/157 (54%)

Query:     1 MVNTQMKPVASLLLVLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMG 60
             M  T  + +A+ LL LN  M++IVLG   W +N+ I +G    PSF             G
Sbjct:     1 MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYI-NGQTNHPSFG------------G 47

Query:    61 NAATGFFVTFALIAGVVGAASCIAGLNHVRVWTADSMPXXXXXXXXXXXXXXXXXGFACK 120
             N AT FF+TF+++A VVG AS +AG NH+R W  DS+                  G ACK
Sbjct:    48 NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 107

Query:   121 EIELH-IRNARLRTMEAFLIILSVTQLLYIAAIHGGA 156
             +I +   R  RL+ +EAF+IIL+ TQLLY+  IH G+
Sbjct:   108 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIHAGS 144


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.142   0.446    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      159       142   0.00091  102 3  11 21  0.46    30
                                                     30  0.47    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  570 (61 KB)
  Total size of DFA:  131 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.86u 0.11s 11.97t   Elapsed:  00:00:01
  Total cpu time:  11.86u 0.11s 11.97t   Elapsed:  00:00:01
  Start:  Sat May 11 03:04:32 2013   End:  Sat May 11 03:04:33 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_2040079 hypothetical protein (162 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	159
pfam05512	142	pfam05512, AWPM-19, AWPM-19-like family	1e-71

>gnl|CDD|191295 pfam05512, AWPM-19, AWPM-19-like family

 Score =  211 bits (539), Expect = 1e-71
 Identities = 99/142 (69%), Positives = 112/142 (78%)

Query: 15  VLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATGFFVTFALIA 74
            LN CM+VIVLGI GWA+N +I+ GF  GP   LPAHFSPIYFPMGNAATGFFV FAL+A
Sbjct: 1   FLNLCMYVIVLGIAGWALNHSIDRGFTSGPGLGLPAHFSPIYFPMGNAATGFFVIFALLA 60

Query: 75  GVVGAASCIAGLNHVRVWTADSMPAAASAATIAWTLTLLAAGFACKEIELHIRNARLRTM 134
           GVVGAAS ++GL+HVR W  +S+ AAASA  +AW LT LA G ACKEI L  R ARLRT+
Sbjct: 61  GVVGAASKLSGLSHVRSWRPESLAAAASAGLVAWALTALAMGLACKEIHLGGRGARLRTL 120

Query: 135 EAFLIILSVTQLLYIAAIHGGA 156
           EAF IILS TQLLYI AIH G+
Sbjct: 121 EAFTIILSATQLLYILAIHAGS 142

Members of this family are 19 kDa membrane proteins. The levels of the plant protein AWPM-19 increase dramatically when there is an increase level of abscisic acid. The increase presence of this protein leads to greater tolerance of freezing. Length = 142

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	159
PF05512	142	AWPM-19: AWPM-19-like family; InterPro: IPR008390	100.0

>PF05512 AWPM-19: AWPM-19-like family; InterPro: IPR008390 Members of this family are 19 kDa membrane proteins

Probab=100.00  E-value=2.7e-79  Score=482.39  Aligned_cols=142  Identities=74%  Similarity=1.228  Sum_probs=140.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCCCcCcccccCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCC
Q 031462           15 VLNFCMFVIVLGIGGWAMNRAIEHGFVIGPSFELPAHFSPIYFPMGNAATGFFVTFALIAGVVGAASCIAGLNHVRVWTA   94 (159)
Q Consensus        15 ~lN~~mY~ivlgiagWalN~~id~g~~~~~~~~~pa~~~Piyfp~GN~AT~ffv~faLiAgVVG~aS~l~Gl~Hvr~W~~   94 (159)
                      ++|||||+|++|||||++||+||||++++|++++|+|||||||||||.||+||++|+|||||||++|+++|++|+|+||+
T Consensus         1 ~LN~~mY~ivl~iagWalN~~id~g~~~~~~~~~Pa~~~piyfp~GN~AT~ffv~faLlAgVVG~aS~l~G~~h~r~W~~   80 (142)
T PF05512_consen    1 VLNFCMYVIVLGIAGWALNRAIDHGFEIGPGLGLPAHFSPIYFPMGNAATGFFVIFALLAGVVGAASVLAGLHHVRSWRS   80 (142)
T ss_pred             CeehHHHHHHHHHHHHHHHHHhccCcccCCCCCCCCCcCceeccccchhHHHHHHHHHHHHHHHHHHHHhhHHHHhhcCc
Confidence            48999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHhchhcceeeccccccchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 031462           95 DSMPAAASAATIAWTLTLLAAGFACKEIELHIRNARLRTMEAFLIILSVTQLLYIAAIHGGA  156 (159)
Q Consensus        95 ~SLaaAaa~a~iAWaLTlLAmGlACKEI~lg~R~~rLrtLEaf~IIl~~TQLlY~l~lHag~  156 (159)
                      |||+||+|+++|||++|+||||+||||||+|+||+||||||+|+||+++|||+|++++|+|.
T Consensus        81 ~sLaaAaa~a~iAW~lTlLAmGlACKeI~~g~r~~rLrtlEaf~IIl~~tQLly~l~lH~g~  142 (142)
T PF05512_consen   81 ESLAAAAASALIAWALTLLAMGLACKEIHLGGRNWRLRTLEAFTIILSATQLLYLLALHAGV  142 (142)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhHheeeecCccchhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999984

The levels of the plant protein AWPM-19 increase dramatically when there is an increase level of abscisic acid. The increase presence of this protein leads to greater tolerance of freezing [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	159
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	2e-04

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)

Query: 83  IAGL-NHVRVWTADSMPAAASAATI 106
           +  L   ++++  DS PA A  AT+
Sbjct: 22  LKKLQASLKLYADDSAPALAIKATM 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00