Citrus Sinensis ID: 031556
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 157 | ||||||
| 388498430 | 157 | unknown [Medicago truncatula] | 0.993 | 0.993 | 0.829 | 3e-67 | |
| 388518091 | 156 | unknown [Lotus japonicus] | 0.987 | 0.993 | 0.828 | 2e-66 | |
| 351721684 | 157 | uncharacterized protein LOC100499798 [Gl | 0.993 | 0.993 | 0.803 | 6e-66 | |
| 351727016 | 157 | uncharacterized protein LOC100306348 [Gl | 0.993 | 0.993 | 0.803 | 2e-65 | |
| 224082808 | 157 | predicted protein [Populus trichocarpa] | 0.910 | 0.910 | 0.812 | 4e-59 | |
| 224066249 | 157 | predicted protein [Populus trichocarpa] | 0.910 | 0.910 | 0.812 | 7e-59 | |
| 225438151 | 251 | PREDICTED: uncharacterized protein LOC10 | 0.980 | 0.613 | 0.775 | 1e-57 | |
| 297744142 | 156 | unnamed protein product [Vitis vinifera] | 0.980 | 0.987 | 0.775 | 4e-57 | |
| 255567276 | 157 | conserved hypothetical protein [Ricinus | 0.891 | 0.891 | 0.780 | 1e-55 | |
| 449521507 | 144 | PREDICTED: chromatin modification-relate | 0.828 | 0.902 | 0.816 | 5e-53 |
| >gi|388498430|gb|AFK37281.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/158 (82%), Positives = 142/158 (89%), Gaps = 2/158 (1%)
Query: 1 MDPEGQRASAASASAVMASLLSKKAKLQEELNNIEKQVYDMETSYLQDPSQCGNVLKGFE 60
M+ EGQ+ SA + SA++ASLLS++AKL EEL NIEKQVYDMETSYLQDP QCGNVLKGFE
Sbjct: 1 MESEGQK-SAVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFE 59
Query: 61 GFLSSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEEQAIGREDGRSDFGPGRSKGGGIY 120
GFLSS+KNTA LKRSRKFQPEDRLFSLSSVTSPAAEE A GR+DGRSDFGPGRSKGG IY
Sbjct: 60 GFLSSTKNTAFLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDFGPGRSKGGTIY 119
Query: 121 GNGQGKPKKGRGASRDAKRYRHSSE-DFDYDDDPDVTL 157
NGQGKPKKGRGA RDAKR R SSE DFDY+DDPD+TL
Sbjct: 120 ANGQGKPKKGRGAPRDAKRARASSEQDFDYEDDPDMTL 157
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Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388518091|gb|AFK47107.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|351721684|ref|NP_001236194.1| uncharacterized protein LOC100499798 [Glycine max] gi|255626681|gb|ACU13685.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|351727016|ref|NP_001237402.1| uncharacterized protein LOC100306348 [Glycine max] gi|255628271|gb|ACU14480.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|224082808|ref|XP_002306847.1| predicted protein [Populus trichocarpa] gi|222856296|gb|EEE93843.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224066249|ref|XP_002302046.1| predicted protein [Populus trichocarpa] gi|222843772|gb|EEE81319.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225438151|ref|XP_002273229.1| PREDICTED: uncharacterized protein LOC100260000 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297744142|emb|CBI37112.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255567276|ref|XP_002524619.1| conserved hypothetical protein [Ricinus communis] gi|223536172|gb|EEF37827.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449521507|ref|XP_004167771.1| PREDICTED: chromatin modification-related protein MEAF6-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 157 | ||||||
| TAIR|locus:505006459 | 163 | AT4G14385 "AT4G14385" [Arabido | 0.732 | 0.705 | 0.677 | 2.7e-36 | |
| FB|FBgn0035624 | 225 | Eaf6 "Eaf6" [Drosophila melano | 0.503 | 0.351 | 0.460 | 2.1e-13 | |
| UNIPROTKB|B1AK63 | 169 | MEAF6 "Chromatin modification- | 0.490 | 0.455 | 0.443 | 1.2e-12 | |
| UNIPROTKB|I3LKZ6 | 99 | MEAF1 "Uncharacterized protein | 0.490 | 0.777 | 0.430 | 3.1e-12 | |
| UNIPROTKB|Q52KD8 | 188 | meaf6 "Chromatin modification- | 0.484 | 0.404 | 0.435 | 3.1e-12 | |
| UNIPROTKB|Q5ZIX3 | 182 | MEAF6 "Chromatin modification- | 0.484 | 0.417 | 0.435 | 3.9e-12 | |
| UNIPROTKB|A6H762 | 201 | C3H1orf149 "Chromatin modifica | 0.484 | 0.378 | 0.435 | 3.9e-12 | |
| UNIPROTKB|Q58CU0 | 191 | MEAF6 "Chromatin modification- | 0.484 | 0.397 | 0.435 | 3.9e-12 | |
| UNIPROTKB|F1PY51 | 161 | MEAF6 "Uncharacterized protein | 0.484 | 0.472 | 0.435 | 3.9e-12 | |
| UNIPROTKB|B1AK64 | 192 | MEAF6 "Chromatin modification- | 0.484 | 0.395 | 0.435 | 3.9e-12 |
| TAIR|locus:505006459 AT4G14385 "AT4G14385" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 82/121 (67%), Positives = 95/121 (78%)
Query: 28 QEELNNIEKQVYDMETSYLQDPSQCGNVLKGFEGFLSSSKNTALLKRSRKFQPEDRLFSL 87
++EL +IEKQVY++ETSYLQ+ S GN LKGFEGFLSSSK+TA KRSRKFQPEDR+FSL
Sbjct: 26 RQELRSIEKQVYELETSYLQESSHIGNALKGFEGFLSSSKSTASAKRSRKFQPEDRVFSL 85
Query: 88 SSVTSPAAEEQAIGREDGRSDFGPGRSKXXXXXXXXXXKPKKGRGAS---RDAKRYRHSS 144
SSVTSPAAEE +GREDGR++ GPGRSK KPKKGRG S R+AKR R S+
Sbjct: 86 SSVTSPAAEELGVGREDGRAELGPGRSKGGLSTQG---KPKKGRGQSIIAREAKRSRPST 142
Query: 145 E 145
E
Sbjct: 143 E 143
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| FB|FBgn0035624 Eaf6 "Eaf6" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B1AK63 MEAF6 "Chromatin modification-related protein MEAF6" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LKZ6 MEAF1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q52KD8 meaf6 "Chromatin modification-related protein MEAF6" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ZIX3 MEAF6 "Chromatin modification-related protein MEAF6" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A6H762 C3H1orf149 "Chromatin modification-related protein MEAF6" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q58CU0 MEAF6 "Chromatin modification-related protein MEAF6" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PY51 MEAF6 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B1AK64 MEAF6 "Chromatin modification-related protein MEAF6" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 157 | |||
| pfam09340 | 80 | pfam09340, NuA4, Histone acetyltransferase subunit | 7e-32 |
| >gnl|CDD|220187 pfam09340, NuA4, Histone acetyltransferase subunit NuA4 | Back alignment and domain information |
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Score = 108 bits (272), Expect = 7e-32
Identities = 43/74 (58%), Positives = 57/74 (77%)
Query: 20 LLSKKAKLQEELNNIEKQVYDMETSYLQDPSQCGNVLKGFEGFLSSSKNTALLKRSRKFQ 79
LL KK KL+EEL +E+Q+YD ET YL+D + GN++KGF+G+L SS N + +R RKF
Sbjct: 7 LLQKKKKLEEELAALERQIYDKETEYLEDTTSGGNIIKGFDGYLKSSTNGSAQRRKRKFT 66
Query: 80 PEDRLFSLSSVTSP 93
+DR+FSLSSVTSP
Sbjct: 67 DDDRIFSLSSVTSP 80
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The NuA4 histone acetyltransferase (HAT) multisubunit complex is responsible for acetylation of histone H4 and H2A N-terminal tails in yeast. NuA4 complexes are highly conserved in eukaryotes and play primary roles in transcription, cellular response to DNA damage, and cell cycle control. Length = 80 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 157 | |||
| PF09340 | 80 | NuA4: Histone acetyltransferase subunit NuA4; Inte | 100.0 | |
| KOG3856 | 135 | consensus Uncharacterized conserved protein [Funct | 99.91 | |
| KOG3856 | 135 | consensus Uncharacterized conserved protein [Funct | 89.05 |
| >PF09340 NuA4: Histone acetyltransferase subunit NuA4; InterPro: IPR015418 The NuA4 histone acetyltransferase (HAT) multisubunit complex is responsible for acetylation of histone H4 and H2A N-terminal tails in yeast [] | Back alignment and domain information |
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Probab=100.00 E-value=1.2e-34 Score=208.11 Aligned_cols=80 Identities=54% Similarity=0.855 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCCccceeecccccccCCCcchhhhcCCCCCCCCccccCcCCCch
Q 031556 14 SAVMASLLSKKAKLQEELNNIEKQVYDMETSYLQDPSQCGNVLKGFEGFLSSSKNTALLKRSRKFQPEDRLFSLSSVTSP 93 (157)
Q Consensus 14 ~a~L~~Ll~kRk~Le~~L~~LE~qIYd~EtsYLeeT~~~GNIIKGFDgylkss~~s~~~kR~~~f~d~DRIFSlSS~Tsp 93 (157)
+++|++||++|++|+++|..||+|||++||+||++++++||||||||||++++..+++.+|++.|+++|||||+||+|||
T Consensus 1 k~~L~~l~~~k~~Le~~L~~lE~qIy~~Et~YL~~~~~~GNiikGfd~y~k~~~~~~~~~~~~~~~~~dRiFS~SS~t~~ 80 (80)
T PF09340_consen 1 KKELKELLQKKKKLEKDLAALEKQIYDKETSYLEDTSPYGNIIKGFDGYLKSSSGAANSRRKRGFTDDDRIFSLSSVTSP 80 (80)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCCCCeeChhhhhccccccccccccCCCCccccCcccccccCC
Confidence 47899999999999999999999999999999998889999999999999998766677889999999999999999997
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NuA4 complexes are highly conserved in eukaryotes and play primary roles in transcription, cellular response to DNA damage, and cell cycle control []. |
| >KOG3856 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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| >KOG3856 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00