Citrus Sinensis ID: 031592

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------
Protein Sequence
MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLDNNPSSRHVYFAEDRFVLSKLSFLCEDDNILDLC
Secondary Structure (PSIPRED)
ccccHHHccccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccEEEEccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHcccHHHHHHHcHHHccHcHHHHHHHHHHHHHHHHHHHHHHHHHccccHEEHEEcccccccEEEcccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccHHccccEEEcccccHHccc
Coil and Loop (DISEMBL)
msslrnalprrahkeraqpqsrkkfgllekHKDYVIRAKAYHKKEESIRRLKEKaafrnpdefYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHsldnnpssrhvyfaedrFVLSKLSFlceddnildlc
Flexible Loop (DISEMBL)
msslrnalprrahkeraqpqsrkkfgllekhkdYVIRakayhkkeesirrlkekaafrnpdefyfKMIKtktvdgvhrlEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLhsldnnpsSRHVYFAEDRFVLSKLsflceddnildlc
Low Complexity Region (SEG)
MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLDNNPSSRHVYFAEDRFVLSKLSFLCEDDNILDLC
Disordered region (IsUnstruct)
**************************LLEKHKDYVIRAKAYHK*******L*EKAAFRNPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQ*****IEKLTTMLH********RHVYFAEDRFVLSKLSFLCEDDNIL***
Disordered Region (DISOPRED)
*************************GLLEKHKDYVIRAKAYHKKEE***********RNPDEFYFKMIK************************MKTQDIGYVLQ**************************HVYFAEDRFVLSKLSFLCEDDNILDLC
Disordered Region (DISEMBL)
********************SRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLDNNPSSRHVYFAEDRFVLSKLSFLCEDDNILDLC
Disordered Region (DISPRO)
****************AQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLDNNPSSRHVYFAEDRFVLSKLSFLCEDDNILDLC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKxxxxxxxxxxxxxxxxxxxxxPSSRHVYFAEDRFVLSKLSFLCEDDNILDLC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	157	2.2.26 [Sep-21-2011]
Q8S1Z1	229	Probable U3 small nucleol	yes	no	0.878	0.602	0.753	5e-60
Q9M223	228	Probable U3 small nucleol	yes	no	0.878	0.605	0.688	3e-53
Q9CZJ1	253	Probable U3 small nucleol	yes	no	0.789	0.490	0.492	2e-26
Q55C50	250	Probable U3 small nucleol	yes	no	0.885	0.556	0.451	5e-26
Q9Y3A2	253	Probable U3 small nucleol	yes	no	0.789	0.490	0.476	4e-25
Q8R5K5	253	Probable U3 small nucleol	no	no	0.847	0.525	0.452	5e-25
Q10106	249	Probable U3 small nucleol	yes	no	0.866	0.546	0.421	2e-24
Q9W3C0	237	Probable U3 small nucleol	yes	no	0.891	0.590	0.395	5e-20
Q09462	262	Probable U3 small nucleol	yes	no	0.859	0.515	0.374	5e-16
P34247	250	U3 small nucleolar RNA-as	yes	no	0.853	0.536	0.375	5e-16

>sp|Q8S1Z1|UTP11_ORYSJ Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0810000 PE=2 SV=2

 Score =  229 bits (584), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 104/138 (75%), Positives = 128/138 (92%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSSLRNA+ RRAHKERAQP+SRKKFGLLEKHKDY++RAKA+H+KEE+IR+LKEKA+FRNP
Sbjct: 1   MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYFKMI +KTVDG+HR + EANKYT++ELML+KT+D+GY+LQ +QSE+ KIEKL++ML
Sbjct: 61  DEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKKKIEKLSSML 120

Query: 121 HSLDNNPSSRHVYFAEDR 138
           H LDN   ++HVYFAEDR
Sbjct: 121 HELDNKRPNKHVYFAEDR 138

Involved in nucleolar processing of pre-18S ribosomal RNA.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9M223|UTP11_ARATH Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana GN=At3g60360 PE=1 SV=1

 Score =  206 bits (525), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 95/138 (68%), Positives = 117/138 (84%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSSLRNA+PR AHKER+QP++RK+FG+LEKHKDY+IRA AYHKK+E+++ L++KAAF+NP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEF FKMI +KTVDG HR + E NKY+ EELM+MKTQDIGYV QK QSE+NKI+KLT  L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 121 HSLDNNPSSRHVYFAEDR 138
               +  S RHVY+AEDR
Sbjct: 121 QCTGDQSSRRHVYYAEDR 138

Involved in nucleolar processing of pre-18S ribosomal RNA.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9CZJ1|UTP11_MOUSE Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus GN=Utp11l PE=2 SV=1

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 84/126 (66%), Gaps = 2/126 (1%)

Query: 11  RAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKT 70
           R H+ER+QP  RK+ GLLEK KDY +RA  YHKK++ +R L++KA  +NPDEFY+KM + 
Sbjct: 14  REHRERSQPGFRKRLGLLEKKKDYKLRANDYHKKQDFLRALRKKALEKNPDEFYYKMTRA 73

Query: 71  KTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNPS 128
           K  DGVH  +    + T E+L LM+TQDI Y+  K  +E  KIE+L + LH LD      
Sbjct: 74  KLQDGVHIFKENKEEVTAEQLKLMRTQDIKYIEMKRVAEAKKIERLKSELHLLDFQGKQQ 133

Query: 129 SRHVYF 134
            +HV+F
Sbjct: 134 KKHVFF 139

Involved in nucleolar processing of pre-18S ribosomal RNA.

Mus musculus (taxid: 10090)

>sp|Q55C50|UTP11_DICDI Probable U3 small nucleolar RNA-associated protein 11 OS=Dictyostelium discoideum GN=utp11 PE=3 SV=1

 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 97/144 (67%), Gaps = 5/144 (3%)

Query: 1   MSS--LRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFR 58
           MSS  LR  LP+RA +ER QP+S KK G LE+ KDYV RAK Y+ K +++++LK +AAF+
Sbjct: 1   MSSMNLRRLLPQRAKQERPQPESSKKKGFLERKKDYVERAKDYNNKRDTLKKLKLQAAFK 60

Query: 59  NPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTT 118
           NPDEF +KMI +K VDGVH  E       +E+++ +KTQDI Y+  K +++  KIE+L  
Sbjct: 61  NPDEFNYKMISSKLVDGVHS-EISKTSLKKEQIIDIKTQDILYLQSKRRADDKKIERLQA 119

Query: 119 MLHSLDNN--PSSRHVYFAEDRFV 140
            L  +D+   P+ + +Y  +++ V
Sbjct: 120 TLQYMDSGLEPTEQIIYVDDEKEV 143

Involved in nucleolar processing of pre-18S ribosomal RNA.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9Y3A2|UTP11_HUMAN Probable U3 small nucleolar RNA-associated protein 11 OS=Homo sapiens GN=UTP11L PE=1 SV=2

 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 84/126 (66%), Gaps = 2/126 (1%)

Query: 11  RAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKT 70
           R H+ER+QP  RK  GLLEK KDY +RA  Y KK+E ++ L++KA  +NPDEFY+KM + 
Sbjct: 14  REHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTRV 73

Query: 71  KTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNPS 128
           K  DGVH ++    + T E+L LM+TQD+ Y+  K  +E  KIE+L + LH LD      
Sbjct: 74  KLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQQ 133

Query: 129 SRHVYF 134
           ++HV+F
Sbjct: 134 NKHVFF 139

Involved in nucleolar processing of pre-18S ribosomal RNA.

Homo sapiens (taxid: 9606)

>sp|Q8R5K5|UTP11_RAT Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus GN=Utp11l PE=2 SV=1

 Score =  113 bits (282), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 90/137 (65%), Gaps = 4/137 (2%)

Query: 2   SSLRNALP--RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRN 59
           ++ R A+   +R ++ER+QP  RK  GLLEK KDY +RA  Y KK+E ++ L++KA  +N
Sbjct: 3   AAFRKAVKSRQREYRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKN 62

Query: 60  PDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTM 119
           PDEFY+KM + K  DGVH ++    + T E+L LM+TQD+ Y+  K  +E  KIE+L + 
Sbjct: 63  PDEFYYKMTRVKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSE 122

Query: 120 LHSLD--NNPSSRHVYF 134
           LH LD      +RHV+F
Sbjct: 123 LHLLDFQGKQQNRHVFF 139

Involved in nucleolar processing of pre-18S ribosomal RNA.

Rattus norvegicus (taxid: 10116)

>sp|Q10106|UTP11_SCHPO Probable U3 small nucleolar RNA-associated protein 11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC18G6.06 PE=3 SV=1

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 88/140 (62%), Gaps = 4/140 (2%)

Query: 2   SSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPD 61
           SS +NA  R+ H+ERAQP  R+K+GLLEK KDY  RA+ Y  K++ ++RL+EKA  RNPD
Sbjct: 3   SSFKNAGQRKNHRERAQPFERRKWGLLEKRKDYAQRAQDYKTKQKKLKRLREKALERNPD 62

Query: 62  EFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLH 121
           EFY +M   KT +GV   + E +    + + ++KTQDIG++      ER KI+ L   +H
Sbjct: 63  EFYHEMTHKKTKNGVPLEQREDSTIDMDTIKILKTQDIGWIRHHRNVERAKIDHLEQQMH 122

Query: 122 SL----DNNPSSRHVYFAED 137
           ++    + N S +H  F ++
Sbjct: 123 TVGAHRNKNESRKHTIFVDN 142

Involved in nucleolar processing of pre-18S ribosomal RNA.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q9W3C0|UTP11_DROME Probable U3 small nucleolar RNA-associated protein 11 OS=Drosophila melanogaster GN=CG1789 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 88/144 (61%), Gaps = 4/144 (2%)

Query: 1   MSSLRNALP--RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFR 58
           MSS +NA    ++ H+ER QP+SR+  G LEK KDY  RA    KK+++++ L  +A  +
Sbjct: 1   MSSWKNASKSNQKVHRERHQPESRQHLGFLEKKKDYKKRAIDAQKKQKTLKLLYRRAQNK 60

Query: 59  NPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTT 118
           NPDEFY  MI +K  +  H  +   +++T E+L LM+TQD+ YV+ K   ER KIE+L  
Sbjct: 61  NPDEFYHHMINSKLSNDEHHEKDTKDEHTPEQLALMQTQDLKYVVMKRTMERKKIERLKA 120

Query: 119 MLHSLD--NNPSSRHVYFAEDRFV 140
            L  +D     +++ + F ED ++
Sbjct: 121 SLVDVDAIKGAANKRIKFDEDGYM 144

Involved in nucleolar processing of pre-18S ribosomal RNA.

Drosophila melanogaster (taxid: 7227)

>sp|Q09462|UTP11_CAEEL Probable U3 small nucleolar RNA-associated protein 11 OS=Caenorhabditis elegans GN=C16C10.2 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/147 (37%), Positives = 87/147 (59%), Gaps = 12/147 (8%)

Query: 1   MSSL----RNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAA 56
           MSSL    +    +R H+ER+QP++R+K+G LEK KDY +RA+ Y KK ++I++LK+ A 
Sbjct: 1   MSSLVSISKKLSGQRQHRERSQPEARRKYGELEKKKDYKLRAEDYQKKRDTIKKLKKSAM 60

Query: 57  FRNPDEFYFKMIKTKT-VDGVH---RLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNK 112
            +N DE++  M+ ++T  DG H   + E E  + TQ +  L   +D+ YV  KL  E+ K
Sbjct: 61  DKNQDEYHHHMVNSETWADGRHFDKKTEAEETE-TQIQKKLGSLKDLEYVKFKLNEEKKK 119

Query: 113 IEKLTTMLHSLD---NNPSSRHVYFAE 136
           I+++   LH  D   N   + H  F +
Sbjct: 120 IDEMKGELHFADSSLNGKGNTHTVFVD 146

Involved in nucleolar processing of pre-18S ribosomal RNA.

Caenorhabditis elegans (taxid: 6239)

>sp|P34247|UTP11_YEAST U3 small nucleolar RNA-associated protein 11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTP11 PE=1 SV=2

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 10/144 (6%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           M+ L + + ++ H+ER+Q  SR ++G LEKHKDYV RA+ +H+K+ +++ L+EKA  RNP
Sbjct: 1   MAKLVHDVQKKQHRERSQLTSRSRYGFLEKHKDYVKRAQDFHRKQSTLKVLREKAKERNP 60

Query: 61  DEFYFKMIKTKT------VDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIE 114
           DE+Y  M   KT      +   H  E E    + +++ L+KTQD  YV    Q E  K+E
Sbjct: 61  DEYYHAMHSRKTDAKGLLISSRHGDE-EDESLSMDQVKLLKTQDSNYVRTLRQIELKKLE 119

Query: 115 KLTTMLHSLDNNPSSRHVYFAEDR 138
           K    L       S  H  F + R
Sbjct: 120 KGAKQLMF---KSSGNHTIFVDSR 140

Involved in nucleolar processing of pre-18S ribosomal RNA.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
255553233	231	U3 small nucleolar RNA-associated protei	0.878	0.597	0.804	5e-63
224137520	229	predicted protein [Populus trichocarpa]	0.878	0.602	0.826	6e-63
356524892	229	PREDICTED: probable U3 small nucleolar R	0.878	0.602	0.782	1e-60
147857564	229	hypothetical protein VITISV_023155 [Viti	0.878	0.602	0.797	2e-60
225439057	229	PREDICTED: probable U3 small nucleolar R	0.878	0.602	0.797	2e-60
449470253	228	PREDICTED: probable U3 small nucleolar R	0.878	0.605	0.775	9e-60
115440601	229	Os01g0810000 [Oryza sativa Japonica Grou	0.878	0.602	0.753	3e-58
388510862	229	unknown [Lotus japonicus]	0.878	0.602	0.797	3e-58
356512107	229	PREDICTED: probable U3 small nucleolar R	0.955	0.655	0.691	3e-57
413952156	232	U3 small nucleolar RNA-associated protei	0.993	0.672	0.662	3e-56

>gi|255553233|ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, putative [Ricinus communis] gi|223543291|gb|EEF44823.1| U3 small nucleolar RNA-associated protein, putative [Ricinus communis]

 Score =  245 bits (625), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 111/138 (80%), Positives = 130/138 (94%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSSLRNA+PR+AHKER+QPQSRKK+GLLEKHKDY++RAKA+HKKEE+++RLKEKAAFRNP
Sbjct: 1   MSSLRNAIPRKAHKERSQPQSRKKYGLLEKHKDYIVRAKAFHKKEEALQRLKEKAAFRNP 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYFKMIKT+TVDGVHR E +ANKYT+EEL+LMKTQDIGY+LQKLQSE+ KIEKLT  L
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQANKYTEEELLLMKTQDIGYILQKLQSEKKKIEKLTATL 120

Query: 121 HSLDNNPSSRHVYFAEDR 138
           HSL N PS+RH+Y+ EDR
Sbjct: 121 HSLKNQPSNRHIYYVEDR 138

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137520|ref|XP_002322578.1| predicted protein [Populus trichocarpa] gi|222867208|gb|EEF04339.1| predicted protein [Populus trichocarpa]

 Score =  245 bits (625), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 114/138 (82%), Positives = 127/138 (92%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSSLRNA+PR+AHKERAQPQ+RKKFGLLEKHKDYV RAKA+HKKEE++RRLKEKAA RNP
Sbjct: 1   MSSLRNAIPRKAHKERAQPQARKKFGLLEKHKDYVARAKAFHKKEETLRRLKEKAASRNP 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYF MIK+KTVDGVHR + EANKYTQEEL+LMKTQDIGY+LQK QSE+ KIEKLT  L
Sbjct: 61  DEFYFGMIKSKTVDGVHRPQSEANKYTQEELLLMKTQDIGYILQKAQSEKKKIEKLTATL 120

Query: 121 HSLDNNPSSRHVYFAEDR 138
           HSLD  PSS+H+YFAEDR
Sbjct: 121 HSLDGRPSSKHIYFAEDR 138

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524892|ref|XP_003531062.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11-like [Glycine max]

 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/138 (78%), Positives = 129/138 (93%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSSLRNA+PRRAHKER+QP SRKKFGLLEKHKDY+ RAKA+HKKE+++R+L+EKAA RN 
Sbjct: 1   MSSLRNAIPRRAHKERSQPSSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLREKAANRNE 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYFKM++TKTVDGVH+ E EANKYTQEELMLMKTQD+GY+LQK+QSERNKIE+LT  L
Sbjct: 61  DEFYFKMVRTKTVDGVHKPESEANKYTQEELMLMKTQDMGYILQKIQSERNKIERLTASL 120

Query: 121 HSLDNNPSSRHVYFAEDR 138
           HS+DN P+++HV+FAEDR
Sbjct: 121 HSIDNQPANKHVFFAEDR 138

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147857564|emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]

 Score =  236 bits (603), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/138 (79%), Positives = 128/138 (92%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSS RNA+ RRA+KERAQP  RKKFGLLEKHKDYV+RA+A+HKKEE++++LKEKAAFRNP
Sbjct: 1   MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNP 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYFKMIKT+TVDGVHR E +ANKY+ EELMLMKTQD+GYVLQK+QSE+ KIEKLT ML
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAML 120

Query: 121 HSLDNNPSSRHVYFAEDR 138
           HSLDN P++RHVY+AEDR
Sbjct: 121 HSLDNQPTNRHVYYAEDR 138

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439057|ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Vitis vinifera] gi|239056174|emb|CAQ58608.1| unknown gene [Vitis vinifera] gi|239056194|emb|CAQ58632.1| unknown protein / putative CGI-94 protein [Vitis vinifera] gi|296085811|emb|CBI31135.3| unnamed protein product [Vitis vinifera]

 Score =  236 bits (603), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/138 (79%), Positives = 128/138 (92%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSS RNA+ RRA+KERAQP  RKKFGLLEKHKDYV+RA+A+HKKEE++++LKEKAAFRNP
Sbjct: 1   MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNP 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYFKMIKT+TVDGVHR E +ANKY+ EELMLMKTQD+GYVLQK+QSE+ KIEKLT ML
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAML 120

Query: 121 HSLDNNPSSRHVYFAEDR 138
           HSLDN P++RHVY+AEDR
Sbjct: 121 HSLDNQPTNRHVYYAEDR 138

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470253|ref|XP_004152832.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11-like [Cucumis sativus] gi|449477691|ref|XP_004155095.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11-like [Cucumis sativus]

 Score =  234 bits (597), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 107/138 (77%), Positives = 126/138 (91%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSSLRNA+PRR +KERAQPQSRKKFGLLEKHKDY+ RAKA+HKKE+++R+LKEKAAF+NP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYFKMI+T+TVDGVH+ E   NKYT E+LMLMKTQD GY+LQK+QSE+ KIEKLT  L
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNNPSSRHVYFAEDR 138
           HSLDN PS++H+YFAEDR
Sbjct: 121 HSLDNQPSNKHLYFAEDR 138

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115440601|ref|NP_001044580.1| Os01g0810000 [Oryza sativa Japonica Group] gi|73621302|sp|Q8S1Z1.2|UTP11_ORYSJ RecName: Full=Probable U3 small nucleolar RNA-associated protein 11; Short=U3 snoRNA-associated protein 11 gi|55297663|dbj|BAD68234.1| putative CGI-94 protein [Oryza sativa Japonica Group] gi|55297664|dbj|BAD68235.1| putative CGI-94 protein [Oryza sativa Japonica Group] gi|113534111|dbj|BAF06494.1| Os01g0810000 [Oryza sativa Japonica Group] gi|215717047|dbj|BAG95410.1| unnamed protein product [Oryza sativa Japonica Group] gi|215767926|dbj|BAH00155.1| unnamed protein product [Oryza sativa Japonica Group] gi|218189251|gb|EEC71678.1| hypothetical protein OsI_04152 [Oryza sativa Indica Group] gi|222619423|gb|EEE55555.1| hypothetical protein OsJ_03819 [Oryza sativa Japonica Group]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 104/138 (75%), Positives = 128/138 (92%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSSLRNA+ RRAHKERAQP+SRKKFGLLEKHKDY++RAKA+H+KEE+IR+LKEKA+FRNP
Sbjct: 1   MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYFKMI +KTVDG+HR + EANKYT++ELML+KT+D+GY+LQ +QSE+ KIEKL++ML
Sbjct: 61  DEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKKKIEKLSSML 120

Query: 121 HSLDNNPSSRHVYFAEDR 138
           H LDN   ++HVYFAEDR
Sbjct: 121 HELDNKRPNKHVYFAEDR 138

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510862|gb|AFK43497.1| unknown [Lotus japonicus]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 110/138 (79%), Positives = 123/138 (89%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSSLRNALPRRAHKERAQP SRKKFG LEKHKDYV RAKA+HKKEE++R L+EKAA RN 
Sbjct: 1   MSSLRNALPRRAHKERAQPSSRKKFGHLEKHKDYVERAKAFHKKEETLRILREKAANRNQ 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYFKMI+T+T DGVHR E EANKYTQ+ELMLMKTQD+GYVLQKLQSER KIEKL   L
Sbjct: 61  DEFYFKMIRTRTEDGVHRPESEANKYTQDELMLMKTQDLGYVLQKLQSERKKIEKLAASL 120

Query: 121 HSLDNNPSSRHVYFAEDR 138
           HS+DN P+++H+ FAEDR
Sbjct: 121 HSIDNQPTNKHILFAEDR 138

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512107|ref|XP_003524762.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11-like [Glycine max]

 Score =  226 bits (575), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 110/159 (69%), Positives = 131/159 (82%), Gaps = 9/159 (5%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSSLRNA+PRRAHKER+QP SRKKFGLLEKHKDYV RAKA+HKKE ++R+L+EKAA RN 
Sbjct: 1   MSSLRNAIPRRAHKERSQPSSRKKFGLLEKHKDYVQRAKAFHKKEGTLRKLREKAANRNE 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYFKM++TKTVDGVH+ E EANKYTQ+ELMLMKTQD+GY+LQK+QSERNKIE+LT  L
Sbjct: 61  DEFYFKMVRTKTVDGVHKPESEANKYTQQELMLMKTQDMGYILQKIQSERNKIERLTASL 120

Query: 121 HSLDNNPSSRHVYFA---------EDRFVLSKLSFLCED 150
           HS+D  P ++HV FA         E ++  SK+ F  ED
Sbjct: 121 HSIDKQPVNKHVLFAEEREEAKELESQYQKSKIPFTSED 159

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413952156|gb|AFW84805.1| U3 small nucleolar RNA-associated protein 11 [Zea mays]

 Score =  223 bits (567), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 104/157 (66%), Positives = 132/157 (84%), Gaps = 1/157 (0%)

Query: 1   MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
           MSSLRNA+PRRAHKERAQP++RKKFGLLEKHKDYV+RA+AYH KE +I +LKEKAAFRNP
Sbjct: 1   MSSLRNAIPRRAHKERAQPEARKKFGLLEKHKDYVVRARAYHIKEATIAKLKEKAAFRNP 60

Query: 61  DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
           DEFYFKMI ++TV G+HR + E NKYT+EEL+L+K +D+GY+LQ +QSE+ KIEKL++ L
Sbjct: 61  DEFYFKMINSRTVGGIHRPKPEDNKYTEEELLLLKNKDMGYILQSVQSEKKKIEKLSSTL 120

Query: 121 HSLDNNPSSRHVYFAEDRFVLSKL-SFLCEDDNILDL 156
           H LDN P ++HVYFAEDR    ++ S + +  N+ DL
Sbjct: 121 HELDNKPQNKHVYFAEDREEAKEIQSRIGQSSNMPDL 157

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	157
TAIR|locus:2103356	228	EDA14 "EMBRYO SAC DEVELOPMENT	0.878	0.605	0.688	2.5e-49
UNIPROTKB|E1BU24	253	UTP11L "Uncharacterized protei	0.821	0.509	0.496	3e-30
MGI|MGI:1914455	253	Utp11l "UTP11-like, U3 small n	0.821	0.509	0.473	1.2e-28
ZFIN|ZDB-GENE-030131-8093	250	utp11l "UTP11-like, U3 small n	0.878	0.552	0.478	2.4e-28
UNIPROTKB|F1N165	253	UTP11L "Uncharacterized protei	0.821	0.509	0.473	8.2e-28
UNIPROTKB|B4DJC6	148	UTP11L "Probable U3 small nucl	0.821	0.871	0.458	1.7e-27
UNIPROTKB|Q9Y3A2	253	UTP11L "Probable U3 small nucl	0.821	0.509	0.458	1.7e-27
UNIPROTKB|F1SV29	253	UTP11L "Uncharacterized protei	0.821	0.509	0.458	2.2e-27
RGD|621412	253	Utp11l "UTP11-like, U3 small n	0.821	0.509	0.458	3.5e-27
UNIPROTKB|Q8R5K5	253	Utp11l "Probable U3 small nucl	0.821	0.509	0.458	3.5e-27

TAIR|locus:2103356 EDA14 "EMBRYO SAC DEVELOPMENT ARREST 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 95/138 (68%), Positives = 117/138 (84%)

Query:     1 MSSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNP 60
             MSSLRNA+PR AHKER+QP++RK+FG+LEKHKDY+IRA AYHKK+E+++ L++KAAF+NP
Sbjct:     1 MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query:    61 DEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTML 120
             DEF FKMI +KTVDG HR + E NKY+ EELM+MKTQDIGYV QK QSE+NKI+KLT  L
Sbjct:    61 DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query:   121 HSLDNNPSSRHVYFAEDR 138
                 +  S RHVY+AEDR
Sbjct:   121 QCTGDQSSRRHVYYAEDR 138

GO:0005634 "nucleus" evidence=ISM

GO:0006364 "rRNA processing" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0009561 "megagametogenesis" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000741 "karyogamy" evidence=RCA

GO:0009560 "embryo sac egg cell differentiation" evidence=RCA

UNIPROTKB|E1BU24 UTP11L "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 65/131 (49%), Positives = 92/131 (70%)

Query:    10 RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIK 69
             +R H+ERAQP  RKK GLLEK KDY +RA+ YHKK+ ++R L++KA  +NPDEFYFKMI+
Sbjct:    13 QRQHRERAQPACRKKLGLLEKKKDYRLRAQDYHKKQNALRALQKKALDKNPDEFYFKMIR 72

Query:    70 TKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNP 127
             T+  DGVH ++   ++ T E++ LMKTQD+ YV  K  +E  KIE+L + LH LD     
Sbjct:    73 TQLKDGVHVIKQPEDEVTPEQMKLMKTQDLKYVEMKRVAEAKKIERLKSELHLLDVEGKQ 132

Query:   128 SSRHVYFAEDR 138
              ++H +F + +
Sbjct:   133 PNKHTFFFDTK 143

GO:0006364 "rRNA processing" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=IEA

MGI|MGI:1914455 Utp11l "UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)" [Mus musculus (taxid:10090)]

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 62/131 (47%), Positives = 87/131 (66%)

Query:    10 RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIK 69
             +R H+ER+QP  RK+ GLLEK KDY +RA  YHKK++ +R L++KA  +NPDEFY+KM +
Sbjct:    13 QREHRERSQPGFRKRLGLLEKKKDYKLRANDYHKKQDFLRALRKKALEKNPDEFYYKMTR 72

Query:    70 TKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNP 127
              K  DGVH  +    + T E+L LM+TQDI Y+  K  +E  KIE+L + LH LD     
Sbjct:    73 AKLQDGVHIFKENKEEVTAEQLKLMRTQDIKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query:   128 SSRHVYFAEDR 138
               +HV+F + +
Sbjct:   133 QKKHVFFFDTK 143

GO:0003674 "molecular_function" evidence=ND

GO:0005615 "extracellular space" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006364 "rRNA processing" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=ISO

GO:0007399 "nervous system development" evidence=ISO

GO:0032040 "small-subunit processome" evidence=IEA

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=ISO

ZFIN|ZDB-GENE-030131-8093 utp11l "UTP11-like, U3 small nucleolar ribonucleoprotein (yeast)" [Danio rerio (taxid:7955)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 67/140 (47%), Positives = 91/140 (65%)

Query:     1 MSSLRNALP--RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFR 58
             MSS R AL   +R HKER+Q   RK  GLLEK KDY +RA  YH+KE++I  L++KA  +
Sbjct:     1 MSSFRKALKSKQRDHKERSQLGFRKHLGLLEKKKDYKLRADDYHRKEKTILALRKKAMDK 60

Query:    59 NPDEFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTT 118
             NPDEF FKMI  +  DGVH    +  + T+E+  +M+TQDI YV  K  SE  KIE++ +
Sbjct:    61 NPDEFNFKMIHNQLKDGVHMAIRKDEEMTEEQKKVMRTQDIRYVEMKRVSEMKKIERMKS 120

Query:   119 MLHSLDNNPSSRHVYFAEDR 138
              LH LD    ++HV+F + +
Sbjct:   121 ELHFLDEKKKNKHVFFLDTK 140

GO:0032040 "small-subunit processome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1N165 UTP11L "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 62/131 (47%), Positives = 86/131 (65%)

Query:    10 RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIK 69
             +R H+ER+QP  RK  GLLEK KDY +RA  Y KK+E +R L++KA  +NPDEFY+KM +
Sbjct:    13 QREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLRALRKKALEKNPDEFYYKMTR 72

Query:    70 TKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNP 127
              K  DGVH ++    + T E+L LM+TQDI Y+  K  +E  KIE+L   LH LD     
Sbjct:    73 VKLQDGVHVIKETKEEVTPEQLKLMRTQDIKYIEMKRVAEAKKIERLKAELHLLDFQGKQ 132

Query:   128 SSRHVYFAEDR 138
              ++HV+F + +
Sbjct:   133 QNKHVFFFDTK 143

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

UNIPROTKB|B4DJC6 UTP11L "Probable U3 small nucleolar RNA-associated protein 11" [Homo sapiens (taxid:9606)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/131 (45%), Positives = 87/131 (66%)

Query:    10 RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIK 69
             +R H+ER+QP  RK  GLLEK KDY +RA  Y KK+E ++ L++KA  +NPDEFY+KM +
Sbjct:    13 QREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72

Query:    70 TKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNP 127
              K  DGVH ++    + T E+L LM+TQD+ Y+  K  +E  KIE+L + LH LD     
Sbjct:    73 VKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query:   128 SSRHVYFAEDR 138
              ++HV+F + +
Sbjct:   133 QNKHVFFFDTK 143

GO:0006364 "rRNA processing" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

UNIPROTKB|Q9Y3A2 UTP11L "Probable U3 small nucleolar RNA-associated protein 11" [Homo sapiens (taxid:9606)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 60/131 (45%), Positives = 87/131 (66%)

Query:    10 RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIK 69
             +R H+ER+QP  RK  GLLEK KDY +RA  Y KK+E ++ L++KA  +NPDEFY+KM +
Sbjct:    13 QREHRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72

Query:    70 TKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNP 127
              K  DGVH ++    + T E+L LM+TQD+ Y+  K  +E  KIE+L + LH LD     
Sbjct:    73 VKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query:   128 SSRHVYFAEDR 138
              ++HV+F + +
Sbjct:   133 QNKHVFFFDTK 143

GO:0032040 "small-subunit processome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006917 "induction of apoptosis" evidence=IMP

GO:0007399 "nervous system development" evidence=IMP

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005615 "extracellular space" evidence=IDA

UNIPROTKB|F1SV29 UTP11L "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 60/131 (45%), Positives = 86/131 (65%)

Query:    10 RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIK 69
             +R H+ER+QP  RK  GLLEK KDY +RA  Y  K+E +R L++KA  +NPDEFY+KM +
Sbjct:    13 QREHRERSQPSFRKHLGLLEKKKDYKLRADDYRHKQEYLRALRKKALEKNPDEFYYKMTR 72

Query:    70 TKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNP 127
              K  DGVH ++    + T E+L LM+TQD+ Y+  K  +E  KIE+L + LH LD     
Sbjct:    73 VKLQDGVHVIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query:   128 SSRHVYFAEDR 138
              ++HV+F + +
Sbjct:   133 QNKHVFFFDTK 143

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

RGD|621412 Utp11l "UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)" [Rattus norvegicus (taxid:10116)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 60/131 (45%), Positives = 87/131 (66%)

Query:    10 RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIK 69
             +R ++ER+QP  RK  GLLEK KDY +RA  Y KK+E ++ L++KA  +NPDEFY+KM +
Sbjct:    13 QREYRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72

Query:    70 TKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNP 127
              K  DGVH ++    + T E+L LM+TQD+ Y+  K  +E  KIE+L + LH LD     
Sbjct:    73 VKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query:   128 SSRHVYFAEDR 138
              +RHV+F + +
Sbjct:   133 QNRHVFFFDTK 143

GO:0005615 "extracellular space" evidence=IEA;IDA

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0005730 "nucleolus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0006364 "rRNA processing" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0032040 "small-subunit processome" evidence=IEA

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=IEA

UNIPROTKB|Q8R5K5 Utp11l "Probable U3 small nucleolar RNA-associated protein 11" [Rattus norvegicus (taxid:10116)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 60/131 (45%), Positives = 87/131 (66%)

Query:    10 RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIK 69
             +R ++ER+QP  RK  GLLEK KDY +RA  Y KK+E ++ L++KA  +NPDEFY+KM +
Sbjct:    13 QREYRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKNPDEFYYKMTR 72

Query:    70 TKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNP 127
              K  DGVH ++    + T E+L LM+TQD+ Y+  K  +E  KIE+L + LH LD     
Sbjct:    73 VKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query:   128 SSRHVYFAEDR 138
              +RHV+F + +
Sbjct:   133 QNRHVFFFDTK 143

GO:0032040 "small-subunit processome" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9M223	UTP11_ARATH	No assigned EC number	0.6884	0.8789	0.6052	yes	no
Q8S1Z1	UTP11_ORYSJ	No assigned EC number	0.7536	0.8789	0.6026	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	grail3.0101007501	hypothetical protein (229 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_LG_VII2715	hypothetical protein (380 aa)				•			•		0.819
	estExt_fgenesh4_pg.C_LG_XV0629	hypothetical protein (314 aa)				•	•		•		0.763
	gw1.X.2964.1	hypothetical protein (516 aa)				•			•		0.735
	eugene3.00640202	hypothetical protein (1181 aa)				•			•		0.717
	estExt_Genewise1_v1.C_LG_IV0024	SubName- Full=Putative uncharacterized protein; (604 aa)				•			•		0.702
	eugene3.00160311	hypothetical protein (691 aa)				•			•		0.697
	estExt_fgenesh4_pm.C_280108	hypothetical protein (960 aa)				•			•		0.680
	eugene3.00090493	hypothetical protein (840 aa)				•			•		0.680
	grail3.0106016302	hypothetical protein (217 aa)				•			•		0.664
	gw1.I.4832.1	hypothetical protein (422 aa)				•					0.656

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	157
pfam03998	239	pfam03998, Utp11, Utp11 protein	7e-51
COG5223	240	COG5223, COG5223, Uncharacterized conserved protei	3e-24

>gnl|CDD|217834 pfam03998, Utp11, Utp11 protein

 Score =  162 bits (411), Expect = 7e-51
 Identities = 72/131 (54%), Positives = 93/131 (70%), Gaps = 2/131 (1%)

Query: 10  RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIK 69
           RR H+ER+QP+SRK  GLLEK KDY +RAK YHKKE++++ LKEKAA RNPDEFYF MI 
Sbjct: 1   RRQHRERSQPESRKHLGLLEKKKDYKLRAKDYHKKEKTLKALKEKAAERNPDEFYFGMIS 60

Query: 70  TKTVDGVHRLE-GEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLDNN-P 127
           +KT DGVH L+  E    ++E++ L+KTQD+ YV  K Q+E  KIEKL   LH  D+   
Sbjct: 61  SKTDDGVHILKREEKEVLSKEQVKLLKTQDLNYVRTKRQAEAKKIEKLKEELHLTDSGSA 120

Query: 128 SSRHVYFAEDR 138
             +H+ F +D 
Sbjct: 121 GPKHIVFVDDE 131

This protein is found to be part of a large ribonucleoprotein complex containing the U3 snoRNA. Depletion of the Utp proteins impedes production of the 18S rRNA, indicating that they are part of the active pre-rRNA processing complex. This large RNP complex has been termed the small subunit (SSU) processome. Length = 239

>gnl|CDD|227548 COG5223, COG5223, Uncharacterized conserved protein [Function unknown]

 Score = 93.9 bits (233), Expect = 3e-24
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 3/138 (2%)

Query: 2   SSLRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPD 61
                   R+ H+ER QP+ R+K+G LEK KDYV RA+  +KK++ +++L+EKA  RNPD
Sbjct: 3   LGFTKVPQRKVHRERTQPKDRRKYGKLEKKKDYVKRAQDINKKQDELKKLREKARERNPD 62

Query: 62  EFYFKMIKTKTVDGVHRLEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLH 121
           E+Y  M   KT  GV  +  E      +   ++KTQD      + + ER K     T + 
Sbjct: 63  EYYHGMHSVKTDGGVSSIYREDEPTIMDLAKMLKTQDNEIQRCRRKLERYKPMPCGTQIK 122

Query: 122 SLDNNPSSRHVYFAEDRF 139
             +   SS H  F + RF
Sbjct: 123 FEE---SSLHTIFVDMRF 137

Length = 240

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	157
PF03998	243	Utp11: Utp11 protein; InterPro: IPR007144 A large	100.0
KOG3237	250	consensus Uncharacterized conserved protein [Funct	100.0
COG5223	240	Uncharacterized conserved protein [Function unknow	100.0

>PF03998 Utp11: Utp11 protein; InterPro: IPR007144 A large ribonuclear protein complex is required for the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ]

Probab=100.00  E-value=6.8e-61  Score=400.74  Aligned_cols=138  Identities=54%  Similarity=0.808  Sum_probs=132.1

Q ss_pred             cccccccCCcchhhccccccccccHHHHHHHHhHHHHHHHHHHHHHHhhCCCchhhhhhhccccC-CcccccCc-CCCCC
Q 031592           10 RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKTKTVD-GVHRLEGE-ANKYT   87 (157)
Q Consensus        10 rr~HrER~Qp~~R~~lGlLEKkKDY~~RA~dy~~K~~~lk~Lr~KA~~rNpDEFyf~M~~sk~~~-G~h~~~~~-~~~~t   87 (157)
                      ||+|||||||++|++||||||||||++||+|||+|+++|+.|++||++||||||||+|||+++.+ |+|+...+ ++.+|
T Consensus         1 rr~HrERsQP~~R~~lGlLEKkKDY~lRA~dy~~K~~~Lk~Lr~KA~~RNpDEFyf~M~~sk~~~~G~h~~~~~~~~~~~   80 (243)
T PF03998_consen    1 RRNHRERSQPASRKKLGLLEKKKDYKLRAKDYHKKEAKLKRLREKAANRNPDEFYFGMINSKTDDDGVHVEKREENEELS   80 (243)
T ss_pred             CCcccccCChHHhhhcCcccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHhcccCCCCeeccCccccccCC
Confidence            68999999999999999999999999999999999999999999999999999999999999999 99999887 78999


Q ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhccCCCCCC--CCeEEEecCHHHHHhhhhh
Q 031592           88 QEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLDNNPS--SRHVYFAEDRFVLSKLSFL  147 (157)
Q Consensus        88 ~e~~kl~ktQDl~Yv~~~~~~e~kKIekL~~~L~~~~~~~~--nkH~vFvd~~~e~~~f~~~  147 (157)
                      +++++||+|||++||+++++++.+||++|+++||++++...  |+|||||||++|+++|...
T Consensus        81 ~e~~~llkTQD~~Yv~~~~~~e~kKIekL~~~l~~~~~~~~~~~kh~vFvD~~~e~~~f~~~  142 (243)
T PF03998_consen   81 KEQVKLLKTQDLNYVRTKRQIERKKIEKLQSELHLLDGKSSGKNKHIVFVDSEEEAKEFDPA  142 (243)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCceEEecCchHHHhccHH
Confidence            99999999999999999999999999999999999986544  5999999999999999743

This preribosomal complex contains the U3 snoRNA and at least 40 proteins, which have the following properties: They are nucleolar. They are able to coimmunoprecipitate with the U3 snoRNA and Mpp10 (a protein specific to the SSU processome). They are required for 18S rRNA biogenesis. There appears to be a linkage between polymerase I transcription and the formation of the SSU processome; as some, but not all, of the SSU processome components are required for pre-rRNA transcription initiation. These SSU processome components have been termed t-Utps. They form a pre-complex with pre-18S rRNA in the absence of snoRNA U3 and other SSU processome components. It has been proposed that the t-Utp complex proteins are both rDNA and rRNA binding proteins that are involved in the initiation of pre18S rRNA transcription. Initially binding to rDNA then associating with the 5' end of the nascent pre18S rRNA. The t-Utpcomplex forms the nucleus around which the rest of the SSU processome components, including snoRNA U3, assemble []. From electron microscopy the SSU processome may correspond to the terminal knobs visualized at the 5' ends of nascent 18S rRNA. This entry contains Utp11, a large ribonuclear protein that associates with snoRNA U3 [].; GO: 0006364 rRNA processing, 0032040 small-subunit processome

>KOG3237 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=7e-60  Score=394.45  Aligned_cols=145  Identities=50%  Similarity=0.775  Sum_probs=142.2

Q ss_pred             Cccchhccc--cccccccCCcchhhccccccccccHHHHHHHHhHHHHHHHHHHHHHHhhCCCchhhhhhhccccCCccc
Q 031592            1 MSSLRNALP--RRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKTKTVDGVHR   78 (157)
Q Consensus         1 MSslrna~k--rr~HrER~Qp~~R~~lGlLEKkKDY~~RA~dy~~K~~~lk~Lr~KA~~rNpDEFyf~M~~sk~~~G~h~   78 (157)
                      ||||+||++  |++|||||||.+|++||+|||||||++||.|||+|+.+|+.||++|+++|||||||+|+|+++.+|+|+
T Consensus         1 mss~~~a~ks~rk~HRERsQP~~Rrk~G~LEKkKDY~~RA~dy~kKq~tLK~LrekA~eKNpDEfyh~M~~~K~~dG~hi   80 (250)
T KOG3237|consen    1 MSSFVNASKSRRKVHRERSQPEARRKYGFLEKKKDYKKRAQDYHKKQDTLKKLREKALEKNPDEFYHKMHNSKTKDGRHI   80 (250)
T ss_pred             CcchhhcchhhhhHHHhhcChhHHHhhhhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHhhccccCCccc
Confidence            999999999  999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcCCCCCHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhccCC--CCCCCCeEEEecCHHHHHhhh
Q 031592           79 LEGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLD--NNPSSRHVYFAEDRFVLSKLS  145 (157)
Q Consensus        79 ~~~~~~~~t~e~~kl~ktQDl~Yv~~~~~~e~kKIekL~~~L~~~~--~~~~nkH~vFvd~~~e~~~f~  145 (157)
                      ...+.+++|+|||+||+|||++||.+++++|++|||+|.++||+++  .+.+|+||+||||.+|+++|.
T Consensus        81 ~k~e~~e~t~eqlklmktQDi~YV~~kr~~ErkKIerlka~L~~~~~~~~~s~kH~~F~d~~~ea~~Fd  149 (250)
T KOG3237|consen   81 EKDEVDEPTMEQLKLMKTQDIGYVRMKRQRERKKIERLKAQLHCVDRNKGESNKHTKFVDDREEAKSFD  149 (250)
T ss_pred             cccccccCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhcccccccccccccCceeEEeccHHHHhccC
Confidence            9988889999999999999999999999999999999999999999  678899999999999999997

>COG5223 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.4e-43  Score=290.82  Aligned_cols=142  Identities=37%  Similarity=0.501  Sum_probs=134.9

Q ss_pred             Ccc-chhccccccccccCCcchhhccccccccccHHHHHHHHhHHHHHHHHHHHHHHhhCCCchhhhhhhccccCCcccc
Q 031592            1 MSS-LRNALPRRAHKERAQPQSRKKFGLLEKHKDYVIRAKAYHKKEESIRRLKEKAAFRNPDEFYFKMIKTKTVDGVHRL   79 (157)
Q Consensus         1 MSs-lrna~krr~HrER~Qp~~R~~lGlLEKkKDY~~RA~dy~~K~~~lk~Lr~KA~~rNpDEFyf~M~~sk~~~G~h~~   79 (157)
                      ||+ |.++-+|++||||+||.+|++||+|||||||++||.|||+|+.+|+.||++|+.||||||||+|.+.++.+|+.++
T Consensus         1 Ms~~f~~v~qrK~hrERtQp~~RrkyG~LEK~KDyvkRaqd~~~kq~~lk~lrEka~ernpdEyyh~mhs~Ktd~gv~~~   80 (240)
T COG5223           1 MSLGFTKVPQRKVHRERTQPKDRRKYGKLEKKKDYVKRAQDINKKQDELKKLREKARERNPDEYYHGMHSVKTDGGVSSI   80 (240)
T ss_pred             CCcccccchHhhhHHHhcCcchhhhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcChHHHHHHhhhhcccCCccce
Confidence            786 5555579999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcCCCCCHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCeEEEecCHHHHHhhh
Q 031592           80 EGEANKYTQEELMLMKTQDIGYVLQKLQSERNKIEKLTTMLHSLDNNPSSRHVYFAEDRFVLSKLS  145 (157)
Q Consensus        80 ~~~~~~~t~e~~kl~ktQDl~Yv~~~~~~e~kKIekL~~~L~~~~~~~~nkH~vFvd~~~e~~~f~  145 (157)
                      .++++++++|++++++|||.+|+++.++.|+.+++.+..+++|   ..++.||+|||+..+++.|.
T Consensus        81 ~ReDe~~~md~~KmlktqD~~~~R~~r~lEr~k~~~~~~qi~f---~es~~htifvD~r~~~kef~  143 (240)
T COG5223          81 YREDEPTIMDLAKMLKTQDNEIQRCRRKLERYKPMPCGTQIKF---EESSLHTIFVDMRFGQKEFI  143 (240)
T ss_pred             eccccchHHHHHHHHHhhhhHHHHHHHHHHHhCCcchhceeee---eccccchhhhhhhhhhhhcC
Confidence            8888899999999999999999999999999999999999999   46789999999999999996

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00