Citrus Sinensis ID: 031719


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150----
MYVRTVPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADH
ccEEccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHccccccccHHEEHHHHHHHEEEEEEEEcccccccccccccccccEEEEccccccccccEEEHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccEEEEEEccccc
cEEEEccccccccccHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEHEEccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHcccEEEEEEcccc
myvrtvpptdlnrntewftypgvWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYhffhwkkgtpfaddqgiyngLTWWEQIdngkqltrnrkfLTVVPVVLYLIAShttdyqnpmlFFNTLAVFVLVVAkfpnmhkvrifginadh
myvrtvpptdlnrntewFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADH
MYVRTVPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADH
**********LNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAVFVLVVAKFPNMHKVRIFGI****
******PPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAVFVLVVAKFPNMHKVRIFGIN***
MYVRTVPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADH
MYVRTVPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAVFVLVVAKFPNMHKVRIFGINA**
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MYVRTVPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query154 2.2.26 [Sep-21-2011]
O42901186 Uncharacterized protein C yes no 0.909 0.752 0.378 5e-25
Q921I0153 ORM1-like protein 1 OS=Mu yes no 0.928 0.934 0.409 6e-24
Q53FV1153 ORM1-like protein 2 OS=Ho yes no 0.928 0.934 0.402 1e-23
Q9CPZ6153 ORM1-like protein 3 OS=Mu no no 0.928 0.934 0.402 2e-23
Q5XH57153 ORM1-like protein 1 OS=Xe N/A no 0.928 0.934 0.416 2e-23
Q6QI25153 ORM1-like protein 3 OS=Ra no no 0.928 0.934 0.402 3e-23
Q8N138153 ORM1-like protein 3 OS=Ho no no 0.928 0.934 0.402 3e-23
Q0VD15153 ORM1-like protein 3 OS=Bo yes no 0.928 0.934 0.402 3e-23
Q5R570153 ORM1-like protein 3 OS=Po yes no 0.928 0.934 0.402 4e-23
D2I2F3153 ORM1-like protein 3 OS=Ai yes no 0.928 0.934 0.402 8e-23
>sp|O42901|YBA9_SCHPO Uncharacterized protein C119.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC119.09c PE=2 SV=3 Back     alignment and function desciption
 Score =  113 bits (282), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 86/140 (61%)

Query: 12  NRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGT 71
           N N+ W  Y G W  ++ ++    L+  ++ + S  +AWTL +L++   ++  FHW  GT
Sbjct: 33  NYNSNWVNYKGAWVIHIVLIAALRLIFHAIPSVSRELAWTLTNLTYMAGSFIMFHWVTGT 92

Query: 72  PFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAV 131
           PF  + G Y+ LT WEQ+D G Q T  RK+L V+P++L+L+++H T Y   M   N  A+
Sbjct: 93  PFEFNGGAYDRLTMWEQLDEGNQYTPARKYLLVLPIILFLMSTHYTHYNGWMFLVNIWAL 152

Query: 132 FVLVVAKFPNMHKVRIFGIN 151
           F++++ K P +H+ RIFGI 
Sbjct: 153 FMVLIPKLPAVHRKRIFGIQ 172





Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|Q921I0|ORML1_MOUSE ORM1-like protein 1 OS=Mus musculus GN=Ormdl1 PE=2 SV=1 Back     alignment and function description
>sp|Q53FV1|ORML2_HUMAN ORM1-like protein 2 OS=Homo sapiens GN=ORMDL2 PE=2 SV=2 Back     alignment and function description
>sp|Q9CPZ6|ORML3_MOUSE ORM1-like protein 3 OS=Mus musculus GN=Ormdl3 PE=2 SV=1 Back     alignment and function description
>sp|Q5XH57|ORML1_XENLA ORM1-like protein 1 OS=Xenopus laevis GN=ormdl1 PE=2 SV=1 Back     alignment and function description
>sp|Q6QI25|ORML3_RAT ORM1-like protein 3 OS=Rattus norvegicus GN=Ormdl3 PE=2 SV=2 Back     alignment and function description
>sp|Q8N138|ORML3_HUMAN ORM1-like protein 3 OS=Homo sapiens GN=ORMDL3 PE=1 SV=1 Back     alignment and function description
>sp|Q0VD15|ORML3_BOVIN ORM1-like protein 3 OS=Bos taurus GN=ORMDL3 PE=2 SV=1 Back     alignment and function description
>sp|Q5R570|ORML3_PONAB ORM1-like protein 3 OS=Pongo abelii GN=ORMDL3 PE=2 SV=1 Back     alignment and function description
>sp|D2I2F3|ORML3_AILME ORM1-like protein 3 OS=Ailuropoda melanoleuca GN=ORMDL3 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query154
224075186154 predicted protein [Populus trichocarpa] 1.0 1.0 0.889 1e-76
225426208157 PREDICTED: uncharacterized protein C119. 1.0 0.980 0.883 1e-75
224053743154 predicted protein [Populus trichocarpa] 1.0 1.0 0.870 9e-75
225470956157 PREDICTED: uncharacterized protein C119. 1.0 0.980 0.863 5e-74
388502058157 unknown [Lotus japonicus] 0.993 0.974 0.856 3e-73
449432032157 PREDICTED: uncharacterized protein C119. 0.993 0.974 0.862 3e-73
388498352157 unknown [Medicago truncatula] 0.993 0.974 0.843 3e-73
388520763157 unknown [Lotus japonicus] 0.993 0.974 0.849 5e-73
255564625157 ormdl, putative [Ricinus communis] gi|22 0.993 0.974 0.849 6e-73
359474131171 PREDICTED: uncharacterized protein C119. 1.0 0.900 0.809 9e-73
>gi|224075186|ref|XP_002304572.1| predicted protein [Populus trichocarpa] gi|222842004|gb|EEE79551.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  290 bits (742), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 137/154 (88%), Positives = 145/154 (94%)

Query: 1   MYVRTVPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFV 60
           MYV+  P TD+NRNTEWFTYPGVWTTY+ I+F+SWLLVLS+F CS GMAWT+VH  HF V
Sbjct: 1   MYVKAEPTTDVNRNTEWFTYPGVWTTYMLIVFMSWLLVLSIFGCSPGMAWTIVHFCHFAV 60

Query: 61  TYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ 120
           TYHFFHWKKGTPFADDQGIYNGLTWWEQI+NGKQLTRNRKFLTVVPVVLYLIASHTTDYQ
Sbjct: 61  TYHFFHWKKGTPFADDQGIYNGLTWWEQIENGKQLTRNRKFLTVVPVVLYLIASHTTDYQ 120

Query: 121 NPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADH 154
           NPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADH
Sbjct: 121 NPMLFFNTLAVFVLVVAKFPNMHKVRIFGINADH 154




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426208|ref|XP_002262624.1| PREDICTED: uncharacterized protein C119.09c isoform 1 [Vitis vinifera] gi|147807640|emb|CAN68846.1| hypothetical protein VITISV_024149 [Vitis vinifera] gi|297742409|emb|CBI34558.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224053743|ref|XP_002297957.1| predicted protein [Populus trichocarpa] gi|222845215|gb|EEE82762.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225470956|ref|XP_002266406.1| PREDICTED: uncharacterized protein C119.09c isoform 1 [Vitis vinifera] gi|147833320|emb|CAN64101.1| hypothetical protein VITISV_008727 [Vitis vinifera] gi|297745501|emb|CBI40581.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388502058|gb|AFK39095.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|449432032|ref|XP_004133804.1| PREDICTED: uncharacterized protein C119.09c-like [Cucumis sativus] gi|449477951|ref|XP_004155172.1| PREDICTED: uncharacterized protein C119.09c-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|388498352|gb|AFK37242.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388520763|gb|AFK48443.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|255564625|ref|XP_002523307.1| ormdl, putative [Ricinus communis] gi|223537395|gb|EEF39023.1| ormdl, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359474131|ref|XP_003631406.1| PREDICTED: uncharacterized protein C119.09c isoform 2 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query154
TAIR|locus:2165690154 AT5G42000 "AT5G42000" [Arabido 0.993 0.993 0.849 4.6e-73
TAIR|locus:2035352157 AT1G01230 "AT1G01230" [Arabido 0.993 0.974 0.803 3.8e-69
POMBASE|SPBC119.09c186 SPBC119.09c "ORMDL family prot 0.902 0.747 0.381 9.4e-27
MGI|MGI:2181669153 Ormdl1 "ORM1-like 1 (S. cerevi 0.948 0.954 0.408 1.4e-25
UNIPROTKB|Q53FV1153 ORMDL2 "ORM1-like protein 2" [ 0.948 0.954 0.401 1.8e-25
MGI|MGI:1913862153 Ormdl3 "ORM1-like 3 (S. cerevi 0.928 0.934 0.402 2.2e-25
UNIPROTKB|Q5XH57153 ormdl1 "ORM1-like protein 1" [ 0.948 0.954 0.414 2.9e-25
UNIPROTKB|F1NZ87154 ORMDL1 "Uncharacterized protei 0.948 0.948 0.408 3.6e-25
RGD|1560577153 Ormdl3 "ORM1-like 3 (S. cerevi 0.928 0.934 0.402 3.6e-25
UNIPROTKB|Q0VD15153 ORMDL3 "ORM1-like protein 3" [ 0.928 0.934 0.402 4.6e-25
TAIR|locus:2165690 AT5G42000 "AT5G42000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
 Identities = 130/153 (84%), Positives = 142/153 (92%)

Query:     1 MYVRTVPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFV 60
             MYVR +P TD+NRNTEWFTYPGVWTTY+ ILF SWLLVLS+F+CS G+AWT+VHL+HF V
Sbjct:     1 MYVRALPTTDVNRNTEWFTYPGVWTTYILILFFSWLLVLSVFHCSPGIAWTIVHLAHFTV 60

Query:    61 TYHFFHWKKGTPFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ 120
             TYH FHWKKGTPF DDQG+YN LTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ
Sbjct:    61 TYHSFHWKKGTPFGDDQGVYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQ 120

Query:   121 NPMLFFNTLAVFVLVVAKFPNMHKVRIFGINAD 153
             +PMLF NTLAVFV+VVAKFP+MHKVRIFGIN D
Sbjct:   121 HPMLFLNTLAVFVMVVAKFPHMHKVRIFGINGD 153




GO:0003674 "molecular_function" evidence=ND
GO:0005739 "mitochondrion" evidence=ISM
GO:0005783 "endoplasmic reticulum" evidence=ISS
GO:0006457 "protein folding" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
TAIR|locus:2035352 AT1G01230 "AT1G01230" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPBC119.09c SPBC119.09c "ORMDL family protein (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
MGI|MGI:2181669 Ormdl1 "ORM1-like 1 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q53FV1 ORMDL2 "ORM1-like protein 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1913862 Ormdl3 "ORM1-like 3 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5XH57 ormdl1 "ORM1-like protein 1" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|F1NZ87 ORMDL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1560577 Ormdl3 "ORM1-like 3 (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VD15 ORMDL3 "ORM1-like protein 3" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
D2I2F3ORML3_AILMENo assigned EC number0.40270.92850.9346yesno
Q9VP04ORMDL_DROMENo assigned EC number0.37060.92200.9220yesno
Q5R570ORML3_PONABNo assigned EC number0.40270.92850.9346yesno
Q53FV1ORML2_HUMANNo assigned EC number0.40270.92850.9346yesno
Q0VD15ORML3_BOVINNo assigned EC number0.40270.92850.9346yesno
Q921I0ORML1_MOUSENo assigned EC number0.40970.92850.9346yesno
Q5XJR6ORML3_DANRENo assigned EC number0.38620.93500.9411yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query154
pfam04061135 pfam04061, ORMDL, ORMDL family 4e-63
COG5081180 COG5081, COG5081, Predicted membrane protein [Func 4e-31
>gnl|CDD|190849 pfam04061, ORMDL, ORMDL family Back     alignment and domain information
 Score =  189 bits (483), Expect = 4e-63
 Identities = 64/135 (47%), Positives = 85/135 (62%)

Query: 12  NRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGT 71
           N N  W    G W  Y+ ++ +  L +LS+   S+  AWTL +L H   +Y FFHW KGT
Sbjct: 1   NPNANWVNQRGAWLIYVVLILLLKLFLLSIPGFSTEWAWTLTNLIHNIGSYIFFHWVKGT 60

Query: 72  PFADDQGIYNGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAV 131
           PF  DQG Y+ LT WEQID G Q T  RKFLTVVP+VL+L+++H T Y   +   N +A+
Sbjct: 61  PFEFDQGAYDNLTMWEQIDEGAQYTPARKFLTVVPIVLFLLSTHYTHYDLTLFIINLIAL 120

Query: 132 FVLVVAKFPNMHKVR 146
            V+V+ K P MH+VR
Sbjct: 121 LVVVIPKLPFMHRVR 135


Evidence form suggests that ORMDLs are involved in protein folding in the ER. Orm proteins have been identified as negative regulators of sphingolipid synthesis that form a conserved complex with serine palmitoyltransferase, the first and rate-limiting enzyme in sphingolipid production. This novel and conserved protein complex, has been termed the SPOTS complex (serine palmitoyltransferase, Orm1/2, Tsc3, and Sac1). Length = 135

>gnl|CDD|227413 COG5081, COG5081, Predicted membrane protein [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 154
KOG3319153 consensus Predicted membrane protein [Function unk 100.0
PF04061136 ORMDL: ORMDL family ; InterPro: IPR007203 ORMDL1 b 100.0
COG5081180 Predicted membrane protein [Function unknown] 100.0
>KOG3319 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=2.4e-82  Score=499.00  Aligned_cols=153  Identities=52%  Similarity=0.905  Sum_probs=151.1

Q ss_pred             CccccCCCCCCCCCcceecCCchhhhHHHHHHHHHHHHHhhcCCCcCcchhhhHHHHHhhhheeeeeecCcCCCCCCccc
Q 031719            1 MYVRTVPPTDLNRNTEWFTYPGVWTTYLSILFISWLLVLSLFNCSSGMAWTLVHLSHFFVTYHFFHWKKGTPFADDQGIY   80 (154)
Q Consensus         1 ~~~~~~~~~~~N~N~~W~~~~G~W~~yiv~i~l~~l~~l~ip~~s~~~~WTltn~~h~~~ty~~fHwvKGtPf~~~qG~y   80 (154)
                      ++.++.+++|+|+|++|++|||+|++|+++|+++|++++++||+|.+++|||||++|+++||+||||+|||||++|||+|
T Consensus         1 m~~~~~~~~~~N~Nt~w~~~rG~Wl~yil~i~ll~l~~ls~p~~s~~~aWTltnl~h~~~tyi~fH~vkGtPF~~d~g~y   80 (153)
T KOG3319|consen    1 MMDVADQHSDVNPNTRWVNQRGAWLIYILIILLLHLVLLSIPFVSPPWAWTLTNLIHNIGTYIFFHWVKGTPFEDDQGAY   80 (153)
T ss_pred             CCccccCcCcCCCCceeeecCchHHHHHHHHHHHHHHHHhCccCCcchhHHHHHHHHHHhHheeEEEecCCCCcCCCcHh
Confidence            57889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcceeeecCCCCCCccceeeehhhHHHHHHhhcccCCCCCchhhhHHhhhhhhhcCCCccceeeEeccccC
Q 031719           81 NGLTWWEQIDNGKQLTRNRKFLTVVPVVLYLIASHTTDYQNPMLFFNTLAVFVLVVAKFPNMHKVRIFGINAD  153 (154)
Q Consensus        81 ~~LT~WEQID~g~q~T~trKFL~~vPIvLFllashyt~yd~~~f~iN~~~l~~vviPKLP~~HrvRifGiN~~  153 (154)
                      |+||||||||+|.||||+||||+++||+||++||||||||..+|++|++|+++|++||||+||||||||||||
T Consensus        81 ~~lT~WEQid~g~q~T~~RKFLtivPIvLfl~~s~yt~y~~~~F~~N~~sl~~v~iPKlp~~H~vRIfgIn~~  153 (153)
T KOG3319|consen   81 RLLTHWEQIDDGVQYTPSRKFLTIVPIVLFLLASHYTKYDHPLFLLNTLSLFVVVIPKLPQMHGVRIFGINKY  153 (153)
T ss_pred             hhccHHHHhccccccccchhhhhHHHHHHHHHHHHhhccCcchhHHHHHHHHhhhhccccccceEEEecccCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999997



>PF04061 ORMDL: ORMDL family ; InterPro: IPR007203 ORMDL1 belongs to a novel gene family comprising three genes in humans (ORMDL1, ORMDL2 and ORMDL3), and homologs in yeast, microsporidia, plants, Drosophila, urochordates and vertebrates Back     alignment and domain information
>COG5081 Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00